Metagenome Family F086317

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086317
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	74 residues
Representative Sequence	MVGGEHSSVELTVSVKAPCQECGGRGYVETVTGGGRIVADRTKECLTCSGMGLIPEDMPLSQFRELLASHVR
Number of Associated Samples	75
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	32.43 %
% of genes near scaffold ends (potentially truncated)	21.62 %
% of genes from short scaffolds (< 2000 bps)	88.29 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.964 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (27.928 % of family members)
Environment Ontology (ENVO)	Unclassified (30.631 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.360 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.00% β-sheet: 8.00% Coil/Unstructured: 81.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF12680	SnoaL_2	2.70
PF13751	DDE_Tnp_1_6	2.70
PF00583	Acetyltransf_1	1.80
PF00892	EamA	1.80
PF06912	DUF1275	1.80
PF01715	IPPT	1.80
PF02627	CMD	0.90
PF01195	Pept_tRNA_hydro	0.90
PF00353	HemolysinCabind	0.90
PF00440	TetR_N	0.90
PF00011	HSP20	0.90
PF13466	STAS_2	0.90
PF08940	DUF1918	0.90
PF00589	Phage_integrase	0.90
PF04023	FeoA	0.90
PF00672	HAMP	0.90
PF01551	Peptidase_M23	0.90
PF00990	GGDEF	0.90
PF00753	Lactamase_B	0.90
PF02518	HATPase_c	0.90
PF10442	FIST_C	0.90
PF07730	HisKA_3	0.90
PF08734	GYD	0.90
PF01068	DNA_ligase_A_M	0.90
PF03109	ABC1	0.90
PF01841	Transglut_core	0.90
PF07732	Cu-oxidase_3	0.90
PF13275	S4_2	0.90
PF00561	Abhydrolase_1	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0324	tRNA A37 N6-isopentenylltransferase MiaA	Translation, ribosomal structure and biogenesis [J]	1.80
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	1.80
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG0193	Peptidyl-tRNA hydrolase	Translation, ribosomal structure and biogenesis [J]	0.90
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.90
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	0.90
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.90
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.90
COG1918	Fe2+ transport protein FeoA	Inorganic ion transport and metabolism [P]	0.90
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.90
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.90
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.90
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.90
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.90
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.90
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.96 %
All Organisms	root	All Organisms	36.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.96 %
cellular organisms	root	All Organisms → cellular organisms	35.14 %
Viruses	superkingdom	All Organisms → Viruses	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.14 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.83 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.90 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.23 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.90 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.96 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	8.11 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.41 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.90 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.96 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	3.60 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.70 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.90 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.90 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.90 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.90 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.90 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.96 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	3.60 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	0.90 %
Pasteurella phage PMP-GADVASU-IND	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pasteurella phage PMP-GADVASU-IND	0.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.90 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.90 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.90 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.90 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.96 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	2.70 %
Parcubacteria group bacterium GW2011_GWA2_39_18	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_39_18	0.90 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.90 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.90 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.90 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.90 %
Thermoleophilum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum	0.90 %
Pasteurella phage PMP-GADVASU-IND	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pasteurella phage PMP-GADVASU-IND	0.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.96 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	2.70 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.90 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	0.90 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.90 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	0.90 %
Parcubacteria group bacterium GW2011_GWA2_39_18	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_39_18	0.90 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.90 %
Pasteurella phage PMP-GADVASU-IND	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pasteurella phage PMP-GADVASU-IND	0.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.96 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	2.70 %
Arthrobacter sp. U41	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. U41	0.90 %
Streptomyces sp. NRRL S-813	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NRRL S-813	0.90 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	0.90 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.90 %
Parcubacteria group bacterium GW2011_GWA2_39_18	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_39_18	0.90 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.90 %
Pasteurella phage PMP-GADVASU-IND	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pasteurella phage PMP-GADVASU-IND	0.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig1211274	Not Available	680	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101402083	Not Available	1150	Open in IMG/M
3300000858\|JGI10213J12805_10542109	Not Available	626	Open in IMG/M
3300001431\|F14TB_103069662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	956	Open in IMG/M
3300002568\|C688J35102_119306867	Not Available	671	Open in IMG/M
3300002568\|C688J35102_119564837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	721	Open in IMG/M
3300002568\|C688J35102_120901085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2145	Open in IMG/M
3300004081\|Ga0063454_100314188	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300005172\|Ga0066683_10853322	Not Available	525	Open in IMG/M
3300005181\|Ga0066678_10856995	Not Available	597	Open in IMG/M
3300005937\|Ga0081455_10583996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	732	Open in IMG/M
3300006844\|Ga0075428_102242755	Not Available	563	Open in IMG/M
3300006845\|Ga0075421_101652332	Not Available	695	Open in IMG/M
3300006847\|Ga0075431_100826302	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300006876\|Ga0079217_10140282	Not Available	1154	Open in IMG/M
3300006876\|Ga0079217_10372414	Not Available	829	Open in IMG/M
3300006876\|Ga0079217_10547277	Not Available	735	Open in IMG/M
3300006894\|Ga0079215_10684660	Not Available	689	Open in IMG/M
3300006918\|Ga0079216_10453140	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_39_18	828	Open in IMG/M
3300007004\|Ga0079218_11310911	Not Available	763	Open in IMG/M
3300009100\|Ga0075418_10208411	Not Available	2081	Open in IMG/M
3300009146\|Ga0105091_10360356	Not Available	718	Open in IMG/M
3300009147\|Ga0114129_10416861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1767	Open in IMG/M
3300009156\|Ga0111538_10411507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1713	Open in IMG/M
3300009789\|Ga0126307_10034688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	3898	Open in IMG/M
3300009789\|Ga0126307_10080361	All Organisms → cellular organisms → Bacteria	2573	Open in IMG/M
3300009789\|Ga0126307_10257929	Not Available	1401	Open in IMG/M
3300009789\|Ga0126307_11278865	Not Available	594	Open in IMG/M
3300009840\|Ga0126313_10011682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5578	Open in IMG/M
3300009840\|Ga0126313_10015452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	4961	Open in IMG/M
3300009840\|Ga0126313_10188969	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300009840\|Ga0126313_10365180	Not Available	1140	Open in IMG/M
3300009840\|Ga0126313_10616694	Not Available	875	Open in IMG/M
3300010036\|Ga0126305_10118803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1611	Open in IMG/M
3300010037\|Ga0126304_10610376	Not Available	735	Open in IMG/M
3300010038\|Ga0126315_10032541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2723	Open in IMG/M
3300010038\|Ga0126315_10035890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2612	Open in IMG/M
3300010039\|Ga0126309_10399370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	822	Open in IMG/M
3300010039\|Ga0126309_10479699	Not Available	761	Open in IMG/M
3300010039\|Ga0126309_10493537	Not Available	752	Open in IMG/M
3300010040\|Ga0126308_10280289	Not Available	1091	Open in IMG/M
3300010040\|Ga0126308_11284925	Not Available	520	Open in IMG/M
3300010041\|Ga0126312_10001492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15380	Open in IMG/M
3300010041\|Ga0126312_10153961	Not Available	1597	Open in IMG/M
3300010041\|Ga0126312_10345443	Not Available	1054	Open in IMG/M
3300010041\|Ga0126312_10576506	Not Available	808	Open in IMG/M
3300010042\|Ga0126314_10622230	Not Available	788	Open in IMG/M
3300010042\|Ga0126314_10779849	Not Available	703	Open in IMG/M
3300010044\|Ga0126310_10022421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3187	Open in IMG/M
3300010044\|Ga0126310_11638468	Not Available	532	Open in IMG/M
3300010166\|Ga0126306_10233775	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pasteurella phage PMP-GADVASU-IND	1398	Open in IMG/M
3300010166\|Ga0126306_10587415	Not Available	887	Open in IMG/M
3300012021\|Ga0120192_10058737	Not Available	704	Open in IMG/M
3300012045\|Ga0136623_10057703	Not Available	1694	Open in IMG/M
3300012212\|Ga0150985_105547262	Not Available	899	Open in IMG/M
3300012212\|Ga0150985_120342904	Not Available	525	Open in IMG/M
3300012469\|Ga0150984_109161251	Not Available	693	Open in IMG/M
3300012914\|Ga0157297_10181638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NRRL S-813	712	Open in IMG/M
3300012937\|Ga0162653_100045682	Not Available	669	Open in IMG/M
3300013011\|Ga0169967_1010731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2196	Open in IMG/M
3300013772\|Ga0120158_10086443	Not Available	1945	Open in IMG/M
3300017789\|Ga0136617_10012424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	7589	Open in IMG/M
3300017789\|Ga0136617_10072151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3020	Open in IMG/M
3300018027\|Ga0184605_10507594	Not Available	524	Open in IMG/M
3300018071\|Ga0184618_10497727	Not Available	511	Open in IMG/M
3300018073\|Ga0184624_10358406	Not Available	653	Open in IMG/M
3300018081\|Ga0184625_10565970	Not Available	563	Open in IMG/M
3300018082\|Ga0184639_10471236	Not Available	639	Open in IMG/M
3300018422\|Ga0190265_10419557	Not Available	1439	Open in IMG/M
3300018422\|Ga0190265_10446797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1399	Open in IMG/M
3300018422\|Ga0190265_10800164	Not Available	1065	Open in IMG/M
3300018422\|Ga0190265_11780341	All Organisms → cellular organisms → Bacteria → Terrabacteria group	725	Open in IMG/M
3300018429\|Ga0190272_12506726	Not Available	562	Open in IMG/M
3300018432\|Ga0190275_11282988	Not Available	808	Open in IMG/M
3300018432\|Ga0190275_12700455	Not Available	573	Open in IMG/M
3300018466\|Ga0190268_10454639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	849	Open in IMG/M
3300018466\|Ga0190268_11667919	Not Available	566	Open in IMG/M
3300018466\|Ga0190268_11676765	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300018469\|Ga0190270_11694935	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300018469\|Ga0190270_12237875	Not Available	607	Open in IMG/M
3300018469\|Ga0190270_12460273	Not Available	583	Open in IMG/M
3300018476\|Ga0190274_10988673	Not Available	915	Open in IMG/M
3300018476\|Ga0190274_11059249	Not Available	888	Open in IMG/M
3300018476\|Ga0190274_13055819	Not Available	562	Open in IMG/M
3300018481\|Ga0190271_11303405	Not Available	847	Open in IMG/M
3300018481\|Ga0190271_11927847	Not Available	701	Open in IMG/M
3300018875\|Ga0193608_1103963	Not Available	615	Open in IMG/M
3300018891\|Ga0193610_1051833	Not Available	1118	Open in IMG/M
3300018910\|Ga0193598_1019940	Not Available	1760	Open in IMG/M
3300018918\|Ga0193616_1208436	Not Available	514	Open in IMG/M
3300018933\|Ga0193614_1058433	Not Available	1086	Open in IMG/M
3300019362\|Ga0173479_10108593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1042	Open in IMG/M
3300019377\|Ga0190264_10105352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1337	Open in IMG/M
3300019767\|Ga0190267_10388626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	772	Open in IMG/M
3300020020\|Ga0193738_1079493	Not Available	958	Open in IMG/M
3300027675\|Ga0209077_1157422	Not Available	634	Open in IMG/M
3300028592\|Ga0247822_10935277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	713	Open in IMG/M
3300028592\|Ga0247822_11072007	Not Available	668	Open in IMG/M
3300028608\|Ga0247819_10814726	Not Available	579	Open in IMG/M
3300028705\|Ga0307276_10223493	Not Available	501	Open in IMG/M
3300028717\|Ga0307298_10035188	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1342	Open in IMG/M
3300028722\|Ga0307319_10021446	Not Available	1979	Open in IMG/M
3300028722\|Ga0307319_10028680	Not Available	1719	Open in IMG/M
3300028744\|Ga0307318_10038929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1563	Open in IMG/M
3300028754\|Ga0307297_10039974	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1415	Open in IMG/M
3300028814\|Ga0307302_10202174	Not Available	970	Open in IMG/M
3300028876\|Ga0307286_10095118	Not Available	1042	Open in IMG/M
3300031731\|Ga0307405_11625568	All Organisms → cellular organisms → Bacteria → Terrabacteria group	571	Open in IMG/M
3300032002\|Ga0307416_103054930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. U41	560	Open in IMG/M
3300034377\|Ga0334931_175610	Not Available	521	Open in IMG/M
3300034687\|Ga0334905_025681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	868	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.19%
Host-Associated	Host-Associated	10.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.18%
Plants	Host-Associated → Plants	10.81%
Aquatic	Environmental → Aquatic	9.01%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.11%
Freshwater	Environmental → Aquatic → Freshwater	4.50%
Sediment	Environmental → Aquatic → Sediment	4.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.70%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.90%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.50%
Loam	Environmental → Terrestrial → Soil → Loam	4.50%
Sand	Environmental → Terrestrial → Soil → Sand	4.50%
Ice	Environmental → Aquatic → Freshwater → Ice	2.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	54.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.50%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.50%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	4.50%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	2.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.80%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.90%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	27.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	25.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.41%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.50%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.50%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	4.50%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.80%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.80%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	0.90%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.90%
Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Rock	0.90%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.90%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300013011	Gypsum crust endolithic microbial communities from the Atacama Desert, Chile - KM37	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018875	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018891	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018910	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018918	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018933	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034687	Soil microbial communities from Mojave Desert, California, United States - 1NOC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_02908870	2124908045	Soil	LLREMVGGEHSSLELTVSVKAPCQECGGRGYVETVTGRGRIVGDRTKECLTCSGRGLIPEDMPLSQFRELLASAFR
INPhiseqgaiiFebDRAFT_1014020832	3300000364	Soil	MLGGQRSSAELTISVKVPCQECGGRGFVETVTDAGHVVGDTTKECLACGGKGLIPDDMPLSQFRELLKASSPRRFARRS*
JGI10213J12805_105421092	3300000858	Soil	MEGGEHSSVELTVAVKVPCQECGGRGYVETVTGGGRITRDPSEECLPCSGTGVIPADMPLSQFRELLASHIQ*
F14TB_1030696622	3300001431	Soil	MEGGEHSSVELTVSVKVPCQECGGRGYVETVTGGGRITRDTSEQCLPCSGTGVIPEDMPLSQFQALLASHLQ*
C688J35102_1193068671	3300002568	Soil	MVGGEHSSVELTVSVKAPCQECGGRGYVETATGRGRIVGDRTKECLTCSGRGLIAEDMPLSQFRELLASRVR*
C688J35102_1195648371	3300002568	Soil	MEGGEHSTRELTVSVKVPCQECGGRGYLETVEAGRVVRHPTENCLTCGGAGSIPTDMPLSEFRRMLR*
C688J35102_1209010852	3300002568	Soil	MEGGEHSTRELTVSVKVPCQECGGRGYVETVEAGHVVRHPTENCLTCGGAGSIPTDMPLSEFRRMLR*
Ga0063454_1003141882	3300004081	Soil	MEGGEHSTRELTVCVKVPCQECGGRGYLETVEAGRVVRHPAENCLTCGGTGSIPSDMPLSEFRRMLQ*
Ga0066683_108533222	3300005172	Soil	MEGGEHSSAELTISVKVPCQECGGRGYVETVTDGGHIVGDTTKECLTCSGKGLIPEDMPLSEFRELLASEFR*
Ga0066678_108569952	3300005181	Soil	WEHSSRELTVSVKAPCQECGGRGYIETVKAGHVVGDTTQECLTCSGRGFIPDDMPLSQFRELLKTTFARRFARRS*
Ga0081455_105839961	3300005937	Tabebuia Heterophylla Rhizosphere	MNGGQHSSAELTISVKVPCQECGGRGFVETVSEAGHVVADPTKECLPCGGKGLIPDDMPLSQFRELLKTPLARRFARRS*
Ga0075428_1022427552	3300006844	Populus Rhizosphere	MQGGEHSSAELTVSVKVPCQECGGRGFVETVTSEGHIVGDTTQECLTCRGRGLIPEDMPLSQFRDLL
Ga0075421_1016523322	3300006845	Populus Rhizosphere	MLGGQPSSAELTISVKLPCQECGGRGFVETVTDAGHVVGDTTKECLACGGQGLIPDDMPLSQFRELLKATAPRRFARRT*
Ga0075431_1008263022	3300006847	Populus Rhizosphere	TISVKLPCQECGGRGFVETVTDAGHVVGDTTKECLACGGQGLIPDDMPLSQFRELLKATAPRRFARRT*
Ga0079217_101402823	3300006876	Agricultural Soil	MVGGEHSSVELTVSVKAPCQECGGRGYVETVTGGGRIVADRTKECLTCSGMGLIPEDMPLSQFRELLASHVR*
Ga0079217_103724142	3300006876	Agricultural Soil	MVGGEHSSAELTVSVKAPCQECGGRGYVETVTAGGRIVRERTKDCLTCSGTGLIPEDMPLSQFRELLASHAR*
Ga0079217_105472771	3300006876	Agricultural Soil	LLLAQTLDSSEMHRGQHSSAELTISVKVPCQECGGRGFVETVTEAGHVVDDTTTDCLTCGGKGLIPDDMPLSQFRELLKTPLASRFARRS*
Ga0079215_106846602	3300006894	Agricultural Soil	MHGGQHSSAELTISVKVPCQECGGRGFVETVTEAGHVVDDTTKECLTCGGQGLIPDDMPLSQFREVLKTPLASRFARRS*
Ga0079216_104531401	3300006918	Agricultural Soil	MHGGQHSSAELTISVKVPCQECGGRGFVETVTEAGHIVDDTTKECLTCGGKGLIPDDMPLSQFRELLKTPLASRFARRS*
Ga0079218_113109112	3300007004	Agricultural Soil	MHGGQHSSAELTISVKVPCQECGGRGFVETVTEAGHVVDDTTKECLTCGGQGLIPDDMPLSQFRELLKTPLASRFARRS*
Ga0075418_102084111	3300009100	Populus Rhizosphere	VGGEHSSLELTVSVKAPCQECGGRGYVETITGGGRIVGDRTKECLTCSGKGVIPEDMPLSQFRELLASQVRERE*
Ga0105091_103603561	3300009146	Freshwater Sediment	MEGGEHSTVELTVSVKVPCQECGGRGYVETVTEGGHIIRDTSEECLPCNGTGVIPEDMPLSQFKALLASHLQ*
Ga0114129_104168612	3300009147	Populus Rhizosphere	VGGEHSSLELTVSVKAPCQECGGRGYVETITGGGRIVGDRTKECLTCSGKGVIPEDMPLSQFRELLASHVRERE*
Ga0111538_104115072	3300009156	Populus Rhizosphere	VVGGEHSSLELTVSVKAPCQECGGRGYVETITGGGRIVGDRTKECLTCSGKGVIPEDMPLSQFRELLASHVRERE*
Ga0126307_100346886	3300009789	Serpentine Soil	MEGHEHSSVELTVSVKVPCQECGGRGYVETVTGGGRITRDTSEACLPCSGMGVIPEDMPLSQFQALLASQLH*
Ga0126307_100803613	3300009789	Serpentine Soil	MQGGEHSSAELTISVKVPCQECGGRGYVETVTESGHIVGDTTEECVTCSGRGLIPEDMPLSQFRELLKALASN*
Ga0126307_102579292	3300009789	Serpentine Soil	MEGGEHSTVELTVSVKVPCQECGGRGYVETVTGGGRITRDTSEQCLPCSGTGVIPEDMPLSQFQALLASHLQ*
Ga0126307_112788652	3300009789	Serpentine Soil	MAGGEHSSVDLTIAVKAPCQECGGRGYVETVSGGGRIVADTNEECLTCSGRGVIPEDMPLSQFRELLASHLQ*
Ga0126313_100116822	3300009840	Serpentine Soil	MEGGEHSSVEPTVSVKVPCQECGGRGYFETVTEGGHVVGDATKECLTCGGTGLIPDDMPLSQFRELLASDFGRRRFARSFGRRRFAKPPRVTR*
Ga0126313_100154525	3300009840	Serpentine Soil	MEGGEHSSKELTISVKAPCQECGGRGYIETVRAGRIVGDTTKECLTCGGRGLIPADMPLSEFRELLASHFR*
Ga0126313_101889693	3300009840	Serpentine Soil	MHGGQHSSAELTISVKLPCQECGGRGFVETVSEAGHVVDDTTKECLTCGGKGLIPDDMPLSQFRELLKTPFARRFARRS*
Ga0126313_103651802	3300009840	Serpentine Soil	MEGGEHSSTELTISVKVPCQECGGRGYVETVNEDAHVVGDTTHECLTCGGRGAIPDDMPLSQFRELLASDFGYPFR*
Ga0126313_106166942	3300009840	Serpentine Soil	MEGGEHSSRELTVSVKAPCQECGGRGYIETVKGGHVVGDTETKCLTCDGRGVIPEDMPLSQFRELLKTPFARRFARR*
Ga0126305_101188033	3300010036	Serpentine Soil	REMEGGEHSTVELTVSVKVPCQECGGRGYVETVTGGGRITRDTSEACLPCSGMGVIPEDMPLSQFQALLASQLH*
Ga0126304_106103761	3300010037	Serpentine Soil	SSVELTVSVKAPCQECGGRGYVETVTGGGRIVRDRTKECLTCSGRRLIPEDMPLSQFRELLASHAR*
Ga0126315_100325414	3300010038	Serpentine Soil	MVGGEHSSVELTVSVKAPCQECGGRGYVETVSGRGRIVGDRTTECLTCSGKGLIPEDMPLSQFRELLASRVR*
Ga0126315_100358901	3300010038	Serpentine Soil	MEGGEHSSAELTISVKVPCQECGGRGYVETVTESGHVVGNTTKECLTCAGRGLIPEDMPLSEFRELLASSASRFARRS*
Ga0126309_103993702	3300010039	Serpentine Soil	MVGGEHSSIELTVSVKAPCQECGGRGYVETVTGGGRIVRDTTKECLTCSGRGLIPEDMPLSQFQELLASHAR*
Ga0126309_104796992	3300010039	Serpentine Soil	MVGGEHSSVELTVSVKTPCQECGGRGYVETVTGGGRIVGDRTKECLTCIGRGFIPEDMPLSQFRELLASHVR*
Ga0126309_104935372	3300010039	Serpentine Soil	SVELTVCVKTPCQECGGRGYVETVTGGGRIVGDRTKECLTCSGRGLIPEDMPLSQFLELLASRFQ*
Ga0126308_102802892	3300010040	Serpentine Soil	MVGGERSSVELTVSVKAPCQECGGRGYVETVSGRGRIVGDRTTECLTCSGKGLIPEDMPLSQFRELLASRVR*
Ga0126308_112849251	3300010040	Serpentine Soil	MEGGEHSSVELTVSVKVPCQECGGRGYVETVTGGGRITRDTSEQCLPCSGTGLIPEDMPLSQFQALLASQLH*
Ga0126312_100014924	3300010041	Serpentine Soil	MEGGEHSSRELTVSVKAPCQECGGRGYIETVKGGHVIGDTETKCLTCDGRGVIPEDMPLSQFRELLKTPFARRFARR*
Ga0126312_101539611	3300010041	Serpentine Soil	MVGGQHSSIELTVSVKAPCQECGGRGYVETVTGGGRIVRDTTKECLTCNGRGLIPEDMPLSQFQELLASHAR*
Ga0126312_103454432	3300010041	Serpentine Soil	MYRGQHSSAELTISVKLPCQECGGRGFVETVSEAGHVVDDTTKECLTCGGKGLIPDDMPLSQFRELLKTPFARRFARRS*
Ga0126312_105765062	3300010041	Serpentine Soil	MEGGEHSSVEPTVSVKVPCQECGGRGYSETVTEGGQVASDTTKECLTCGGKGLIPDDMPLSKFRELLASDFGRRRFARPGRRRFAKPSRATR*
Ga0126314_106222302	3300010042	Serpentine Soil	MEGGEHSSVELTVSVKVPCQECGGRGYVETVTGGGRITRTSEKCLPCSGTGVIPEDMPLSQFQALLASHLQ*
Ga0126314_107798491	3300010042	Serpentine Soil	TVSVKVPCQECGGRGYFETVTEGGHVVGDATKECLTCGGTGLIPDDMPLSQFRELLASDFGRRRFARSFGRRRFAKPPRVTR*
Ga0126310_100224214	3300010044	Serpentine Soil	MVGGEHSSAELTVSVKAPCQECGGRGYVETVTAGGRVVRERTKDCLTCSGTGLIPEDMPLSQFRELLASHAR*
Ga0126310_116384681	3300010044	Serpentine Soil	MYRGQHSSAELTISVKVPCQECGGRGFVEAVTEAGHVVDDTSKECLTCGGKGLIPDDMPLSQFRELLKTPFARRFARRS*
Ga0126306_102337752	3300010166	Serpentine Soil	MEGGEHSTVELTVSVKVPCQECGGRGYVETVTGGGRITRDTSEQCLPCSGTGVIPEDMPLSQFQALL
Ga0126306_105874151	3300010166	Serpentine Soil	MEGGEHSSVELTVSVKVPCQECGGRGYVETVTGGGRITRDTSEACLPCSGMGVIPEDMPLSQFQALLASQLH*
Ga0120192_100587372	3300012021	Terrestrial	VEGAEHSSRELTVSVKVPCQECGGRGFVETVSEAGHVVGDPTKECLTCGGRGLIPDDMPLSQFRELLKATAPRRFARRT*
Ga0136623_100577033	3300012045	Polar Desert Sand	SSRELTVSVKVPCQECGGRGYVETVRAGHIVGDKTDKCLHCAGEGCIPNDMPLTQFQELLKTTLAGRFASRFAKPS*
Ga0150985_1055472622	3300012212	Avena Fatua Rhizosphere	HSSRELTVSVKVPCQECGGRGYLETVEAGHIVGHPTENCLTCGGNGCIPNDMPLSQFREMLR*
Ga0150985_1203429041	3300012212	Avena Fatua Rhizosphere	EHSTRELTVSVKVPCQECGGRGYLETVEAGRVVRHPAENCVTCGGTGSIPSDMPLSEFRRMLQ*
Ga0150984_1091612512	3300012469	Avena Fatua Rhizosphere	AGEHSSRELTVSVKVPCQECGGRGYLETVEAGHIVGHPTENCLTCGGNGCIPNDMPLSQFREMLR*
Ga0157297_101816381	3300012914	Soil	MVGGEHSSLELTVSVKAPCQECGGRGYVETVTAGGRVVREKSKDCLTCGGTGLIPEDMPLSQFRELLASHLR*
Ga0162653_1000456822	3300012937	Soil	MLGGQRSSAELTISVKLPCQECGGRGFVETVTDAGRVVGDTTKECLACGGKGLIPDDMPLSQFRELLKATAPRRFARRT*
Ga0169967_10107313	3300013011	Rock	VERGTHSSRELTVSVKVPCPECGGRGYLETVEAGHVVDHPTEPCVACGGEGSIPDDMPLSQFRELLR*
Ga0120158_100864431	3300013772	Permafrost	MEGGEHSSAELTISVKAPCQECGGRGHVETVADGGHVVGDVTKECLTCSGRGFIPEDMPLSQFRELLASDFR*
Ga0136617_100124242	3300017789	Polar Desert Sand	MARGEHSSVELTVSVKAPCQECGGRGYVETVNAAGHIVDETTNECLTCSGRGLIPEDMPLSQFRELLASHLQ
Ga0136617_100721513	3300017789	Polar Desert Sand	MAGSEHSSVELTVSVKAPCQECGGRGYVETVNAAGHIVDETTNECLTCSGRGLIPEDMPLSQFRELLASHLQ
Ga0184605_105075942	3300018027	Groundwater Sediment	SVELTISVKAPCQECGGRGYVETVTDGGHIVGDTTKECLTCSGKGLIPEDMPLSQFRELLASDFR
Ga0184618_104977271	3300018071	Groundwater Sediment	MEGGEHSSAELTISVKVPCQECGGRGYVETVTDGGHVVGDVTKDCLTCSGRGLIPEDMPLSQFRELLASDFR
Ga0184624_103584061	3300018073	Groundwater Sediment	MAGGEHSSVELTVSVKVPCQECGGRGYVETVTGGGRIVGDPTEQCLPCSGRGFVPEDMPLTQFRELLASHLQ
Ga0184625_105659701	3300018081	Groundwater Sediment	MEGGEHSSVELTVSVKVPCQECGGRGYVETVTGDGRITRDTSEECLPCSGTGVIPEDMPLSQFQALLASHLQ
Ga0184639_104712362	3300018082	Groundwater Sediment	LIDDHPSPVELTVSVKAPCQECGGRGYVETVSGGGGIVADPTTDCLTCGGRGLIPEDMPLSQFRELLASDFR
Ga0190265_104195573	3300018422	Soil	MAGGEHSSVELTVSVKVPCQECGGRGYVETVTGGGRIVSDPTEQCLPCSGKGFMPEDMPLSQFRELLASHLQ
Ga0190265_104467971	3300018422	Soil	MHRGRPSSAELTISVKVPCQECGGRGFVETVTEAGHIVDDTTTDCLTCGGKGLIPDDMPLSQFRELLKTSLASRFARRS
Ga0190265_108001642	3300018422	Soil	MVGGEHSSVELTVSVKVPCQECGGRGYIETVSGGGRIVADPTKECLTCSGRGVIPEDMPLSQFRELLASHLQ
Ga0190265_117803411	3300018422	Soil	QHSSAELTISVKVPCQECGGRGFVETVTEAGHVVDDTTTDCLTCGGKGLIPDDMPLSQFRELLKTPLASRFARRS
Ga0190272_125067261	3300018429	Soil	MHGGQHSSVELTISVKVPCQECGGRGFVETVTDAGHVVGDTTKECLTCGGRGLIPDDMPLSQFRELLKTTVAGRFARRS
Ga0190275_112829881	3300018432	Soil	MEGGEHSSAELTISIKAPCQECGGRGYVETVTDGGHVVGDVTKECLTCSGRGLIPEDMPLSRFRELLASDFR
Ga0190275_127004552	3300018432	Soil	MHGAQHSSAELTISVKVPCQECGGRGFVETVSEAGHVVADTTKECLTCGGKGLIPDDMPLSQFRELLKTPLGRRFTRRF
Ga0190268_104546392	3300018466	Soil	MEGGEHSSVELTVSVKVPCQECGGRGYVETVTSGGRITRDTSEECLTCSGRGFVPEDMPLSQFRELLASHLQ
Ga0190268_116679191	3300018466	Soil	MEGGEHSSVELTVSVKVPCQECGGRGYVETVTAGGRIVSDPTEQCLPCSGRGFIAEDMPLSQFRELL
Ga0190268_116767652	3300018466	Soil	LVQALDSSEMLGGQHSSAELTISVKLPCQECGGRGFVETVTDAGHVVGDATKECLACGGKGLIPDDMPLSQFREVLKATAPRRFARRT
Ga0190270_116949352	3300018469	Soil	MLGGQHSSTELTISVKLPCQECGGRGFVETVTDAGHVVGDTTKECLACGGKGLIPDDMPLSQFRELLKATAPRQFARRT
Ga0190270_122378751	3300018469	Soil	LIDDHPSPVELTVSVKAPCQECGGRGYIETVTGGGRIVADPTTDCLTCGGRGLIPEDMPLSQFRELLASHLQ
Ga0190270_124602731	3300018469	Soil	MVGGEHSSVELTVSVKAPCQECGGRGYVETVTGGGRIVGDRTKECLTCGGRGLIPEDMPLSQFKELLASHL
Ga0190274_109886732	3300018476	Soil	MEGGEHSTVELTVSVKVPCQECGGRGYVETVTEGGHITRDTSEDCLPCNGTGVIPEDMPLSQFQALLASHLQ
Ga0190274_110592492	3300018476	Soil	SSLELTVSVKAPCQECGGRGYVETVTGGGRIVGDRTKECHTCSGRGLIPEDMPLSQFRELLASHAR
Ga0190274_130558192	3300018476	Soil	MEGGEHASTELTISVKAPCQECGGRGYLETVTEGGHVVADTTQECLTCSGRGLIPDDMPLSQFRELLASEFGKPFR
Ga0190271_113034053	3300018481	Soil	MEGGEHSTVELTVSVKVPCQECGGRGYVETVTEGGHITRDTSEDCLPCSGTGVIPEDMPLSQFKALLASHLQ
Ga0190271_119278473	3300018481	Soil	EHSSVELTVSVKVLCQECGGRGYVETVTAGGRLVSDPTEQCLPCSGRGFIAEDMPLSQFRELLASHLQ
Ga0193608_11039631	3300018875	Soil	GGDHSSVELTVSVKVPCQECGGRGYVETVTGGGRVTPDTSEECLPCSGTGVIPEDIPLSQFRELLASHLQ
Ga0193610_10518331	3300018891	Soil	LCVRPPREGLMGGARGLSGRLVGMEGGDHSSVELTVSVKVPCQECGGRGYVETVTGGGRVTPDTSEECLPCSGTGVIPEDIPLSQFRELLASHLQ
Ga0193598_10199402	3300018910	Soil	LCVRPPREGLMGGARGLSGRLVGMEGGDHSSVELTVSVKVPCQECGGRVYVETVTGGGRVTPDTSEECLPCSGTGVIPEDIPLSQFRELLASHLQ
Ga0193616_12084361	3300018918	Soil	EHSSVELTVSVKVPCQECGGRGYVETVTGGGRVTPDTSEECLPCSGTGVIPEDIPLSQFRELLASHLQ
Ga0193614_10584331	3300018933	Soil	MGGASGLSGRLVGMEGGEHSSVELTVSVKVPCQECGGRGYVETVTGGGRVTPDTSEECLPCSGTGVIPEDIPLSQFRELLASHLQ
Ga0173479_101085931	3300019362	Soil	MQGGEHSSAELTVSVKVPCQECGGRGFVETVTSEGHIVGDTTQECLTCRGRGLIPEDMPLSQFRDLLASDFG
Ga0190264_101053522	3300019377	Soil	MVGGEHSSNELTVSVKAPCQGCGGRGYVETVTGGGRIVADPTKKCLTCSGRGLIPEDMPLSQFRELLASHLQ
Ga0190267_103886261	3300019767	Soil	MQGGQHSAREPTVSVKVPCQECGGRGYVETLKEGHIVDETANQCLTCAGQGLIPEEMPLSQFRELLKATPTRRFARPPSA
Ga0193738_10794932	3300020020	Soil	QALDSSEMLGGQHSSAELTISVKLPCQECGGRGFVETVTDAGHVVGDTTKECLACHGKGLIPDDMPLSQFRELLKATAPRRFARRS
Ga0209077_11574221	3300027675	Freshwater Sediment	MEGGEHSTVELTVSVKVPCQECGGRGYVETVTEGGHIIRDTSEECLPCNGTGVIPEDMPLSQFKALLASHLQ
Ga0247822_109352771	3300028592	Soil	MAGGEHSPVELTVSVKAPCQECGGRGYIETVTGDGRIVADPTTECLTCSGKGLIPEDMPLSRFRELLASHFR
Ga0247822_110720071	3300028592	Soil	LIDDHPSPVELTVSVKAPCQECGGRGYIETVSGGGRIVADPTTDCLTCGGRGLIPEDMPLSQFRELLASHFR
Ga0247819_108147261	3300028608	Soil	MAGGEHSPVELTVSVKAPCQECGGRGYIETVTGDGRIVADPMTECLTCSGKGLIPEDMPLSRFRELLASHFR
Ga0307276_102234931	3300028705	Soil	MVGGEHSSVELTVSVKAPCQECGGRGYVETITGGGRIVSDRTEECLTCSGEGLIPEDMPLSQFRELLATHAR
Ga0307298_100351882	3300028717	Soil	MAGGQHSSAELTVSVKVPCQECGGRGYVETVTAGGRIVSDPTEQCLPCGGRGFIPEDMPLSQFRELLASHLQ
Ga0307319_100214463	3300028722	Soil	MAGGEHSSIELTISVKVPCQECGGRGYVETVTRGGRIVSDPTEQCVPCSGRGFIPDDMPLSQFRELLASHLQ
Ga0307319_100286803	3300028722	Soil	MAGGQHSSAELTVSVKVPCQECGGRGYVETVTAGGRIVSDPTEQCLPCSGRGFIPEDMPLSQFRELLASHLQ
Ga0307318_100389292	3300028744	Soil	MMGAEHSSVELTICVKVPCQECGGRGYVETVTGGGRIVADHTTECLTCSGRGLIPEDMPLSQFRELLASQIQ
Ga0307297_100399742	3300028754	Soil	MAGGQHSSAELTVSVKVPCQECGGRGYVETVTAGGRIVSDPTEQCLPCGGRGFIPEDMPLSQFRELLAS
Ga0307302_102021742	3300028814	Soil	MTGAEHSSVELTICVKVPCQECGGRGYVETVTGGGRIVADHTTECLTCSGRGLIPEDMPLSQFRELLASQIQ
Ga0307286_100951182	3300028876	Soil	MTGAEHSSVELAICVKVPCQECGGRGYVETVTGGGRIVADHTTECLTCSGRGLIPEDMPLSQFRELLASQIQ
Ga0307405_116255682	3300031731	Rhizosphere	MVGGEHSSNELTVSVKAPCQECGGRGYVETVTAGGRIVRERTKDCLTCSGTGLIPEDMPLSQFRELLASHAQ
Ga0307416_1030549302	3300032002	Rhizosphere	MLGGQRSSAELTISVKVPCQECGGRGFVETVTDAGHVVGDTTKECLACGGTGLIPDDMPLSQFRELLKGTAPRRFARRS
Ga0334931_175610_117_335	3300034377	Sub-Biocrust Soil	MVGGEHSSNELTVSVKVPCQECGGRGYVETVTEAGHIARDTSQECLTCSGRGHIPEDMPLSQFRELMASHLQ
Ga0334905_025681_447_707	3300034687	Soil	MALDSSEMHGGHHPTVEPTISVKLPCQECGGRGFVETVTEAGHVVADTAQECVACGGKGLIPDDMPLSQFRELLKIPVARRFARRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086317

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences