Metagenome Family F086497

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086497
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	73 residues
Representative Sequence	TRVNRDFISKDFVKQNKLRQKQKTNPYLLNTINKIPYKNRITRETELLKIEIKGRVIIVKFDIVLISKNVILGDN
Number of Associated Samples	4
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	25.45 %
% of genes near scaffold ends (potentially truncated)	71.82 %
% of genes from short scaffolds (< 2000 bps)	99.09 %
Associated GOLD sequencing projects	3
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (91.818 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated (100.000 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant corpus (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.07% β-sheet: 9.71% Coil/Unstructured: 59.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF08284	RVP_2	15.45

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.82 %
All Organisms	root	All Organisms	8.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.82 %
Viruses	superkingdom	All Organisms → Viruses	7.27 %
cellular organisms	root	All Organisms → cellular organisms	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.27 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.27 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009500\|Ga0116229_10148539	All Organisms → Viruses → Predicted Viral	2055	Open in IMG/M
3300009500\|Ga0116229_10237176	All Organisms → Viruses → Predicted Viral	1556	Open in IMG/M
3300009500\|Ga0116229_10463774	All Organisms → Viruses → Predicted Viral	1051	Open in IMG/M
3300009500\|Ga0116229_10477537	All Organisms → Viruses → Predicted Viral	1034	Open in IMG/M
3300009500\|Ga0116229_10559854	Not Available	942	Open in IMG/M
3300009500\|Ga0116229_10583035	Not Available	920	Open in IMG/M
3300009500\|Ga0116229_10603372	Not Available	902	Open in IMG/M
3300009500\|Ga0116229_10649264	Not Available	864	Open in IMG/M
3300009500\|Ga0116229_10655632	Not Available	859	Open in IMG/M
3300009500\|Ga0116229_10781714	Not Available	775	Open in IMG/M
3300009500\|Ga0116229_10789775	Not Available	771	Open in IMG/M
3300009500\|Ga0116229_10793410	Not Available	769	Open in IMG/M
3300009500\|Ga0116229_10982530	Not Available	679	Open in IMG/M
3300009500\|Ga0116229_10999756	Not Available	672	Open in IMG/M
3300009500\|Ga0116229_11040300	Not Available	657	Open in IMG/M
3300009500\|Ga0116229_11077176	Not Available	644	Open in IMG/M
3300009500\|Ga0116229_11085934	Not Available	641	Open in IMG/M
3300009500\|Ga0116229_11089905	Not Available	640	Open in IMG/M
3300009500\|Ga0116229_11106866	Not Available	634	Open in IMG/M
3300009500\|Ga0116229_11134243	Not Available	625	Open in IMG/M
3300009500\|Ga0116229_11158487	Not Available	618	Open in IMG/M
3300009500\|Ga0116229_11215040	Not Available	601	Open in IMG/M
3300009500\|Ga0116229_11265742	Not Available	587	Open in IMG/M
3300009500\|Ga0116229_11290517	Not Available	581	Open in IMG/M
3300009500\|Ga0116229_11442193	Not Available	545	Open in IMG/M
3300009500\|Ga0116229_11472610	Not Available	538	Open in IMG/M
3300009500\|Ga0116229_11474073	Not Available	538	Open in IMG/M
3300009500\|Ga0116229_11499444	Not Available	533	Open in IMG/M
3300009500\|Ga0116229_11504405	Not Available	532	Open in IMG/M
3300009500\|Ga0116229_11557611	Not Available	521	Open in IMG/M
3300009500\|Ga0116229_11594040	Not Available	513	Open in IMG/M
3300009500\|Ga0116229_11640040	Not Available	504	Open in IMG/M
3300009697\|Ga0116231_10364056	Not Available	796	Open in IMG/M
3300009697\|Ga0116231_10380692	Not Available	776	Open in IMG/M
3300009697\|Ga0116231_10384922	Not Available	771	Open in IMG/M
3300009697\|Ga0116231_10405018	Not Available	750	Open in IMG/M
3300009697\|Ga0116231_10439353	Not Available	716	Open in IMG/M
3300009697\|Ga0116231_10481887	Not Available	680	Open in IMG/M
3300009697\|Ga0116231_10485833	Not Available	677	Open in IMG/M
3300009697\|Ga0116231_10567864	Not Available	620	Open in IMG/M
3300009697\|Ga0116231_10603834	Not Available	599	Open in IMG/M
3300009697\|Ga0116231_10612842	Not Available	594	Open in IMG/M
3300009697\|Ga0116231_10639449	Not Available	580	Open in IMG/M
3300009697\|Ga0116231_10694024	Not Available	555	Open in IMG/M
3300009697\|Ga0116231_10710218	Not Available	548	Open in IMG/M
3300009697\|Ga0116231_10711560	Not Available	547	Open in IMG/M
3300009697\|Ga0116231_10725154	Not Available	542	Open in IMG/M
3300009697\|Ga0116231_10730859	Not Available	539	Open in IMG/M
3300009709\|Ga0116227_10289044	All Organisms → Viruses → Predicted Viral	1256	Open in IMG/M
3300009709\|Ga0116227_10304226	All Organisms → Viruses → Predicted Viral	1220	Open in IMG/M
3300009709\|Ga0116227_10450328	Not Available	979	Open in IMG/M
3300009709\|Ga0116227_10483765	Not Available	941	Open in IMG/M
3300009709\|Ga0116227_10514951	Not Available	908	Open in IMG/M
3300009709\|Ga0116227_10575039	Not Available	854	Open in IMG/M
3300009709\|Ga0116227_10580505	Not Available	849	Open in IMG/M
3300009709\|Ga0116227_10621335	Not Available	818	Open in IMG/M
3300009709\|Ga0116227_10750583	Not Available	736	Open in IMG/M
3300009709\|Ga0116227_10826355	All Organisms → cellular organisms → Eukaryota → Opisthokonta	698	Open in IMG/M
3300009709\|Ga0116227_10830734	Not Available	696	Open in IMG/M
3300009709\|Ga0116227_10831569	Not Available	696	Open in IMG/M
3300009709\|Ga0116227_10869104	Not Available	679	Open in IMG/M
3300009709\|Ga0116227_10875123	Not Available	677	Open in IMG/M
3300009709\|Ga0116227_10883443	Not Available	673	Open in IMG/M
3300009709\|Ga0116227_10931678	Not Available	654	Open in IMG/M
3300009709\|Ga0116227_10992771	Not Available	632	Open in IMG/M
3300009709\|Ga0116227_11003499	Not Available	628	Open in IMG/M
3300009709\|Ga0116227_11032748	Not Available	618	Open in IMG/M
3300009709\|Ga0116227_11073308	Not Available	606	Open in IMG/M
3300009709\|Ga0116227_11141420	Not Available	586	Open in IMG/M
3300009709\|Ga0116227_11143170	Not Available	585	Open in IMG/M
3300009709\|Ga0116227_11229074	Not Available	563	Open in IMG/M
3300009709\|Ga0116227_11250721	Not Available	558	Open in IMG/M
3300009709\|Ga0116227_11275260	Not Available	552	Open in IMG/M
3300009709\|Ga0116227_11312616	Not Available	543	Open in IMG/M
3300009709\|Ga0116227_11330930	Not Available	539	Open in IMG/M
3300009709\|Ga0116227_11350312	Not Available	535	Open in IMG/M
3300009709\|Ga0116227_11381720	Not Available	529	Open in IMG/M
3300009709\|Ga0116227_11390779	Not Available	527	Open in IMG/M
3300009709\|Ga0116227_11516071	Not Available	501	Open in IMG/M
3300009709\|Ga0116227_11517963	Not Available	501	Open in IMG/M
3300027860\|Ga0209611_10213175	All Organisms → Viruses → Predicted Viral	1173	Open in IMG/M
3300027860\|Ga0209611_10234333	All Organisms → Viruses → Predicted Viral	1104	Open in IMG/M
3300027860\|Ga0209611_10291214	Not Available	962	Open in IMG/M
3300027860\|Ga0209611_10302923	Not Available	939	Open in IMG/M
3300027860\|Ga0209611_10324975	Not Available	898	Open in IMG/M
3300027860\|Ga0209611_10336584	Not Available	878	Open in IMG/M
3300027860\|Ga0209611_10337785	Not Available	876	Open in IMG/M
3300027860\|Ga0209611_10337974	Not Available	876	Open in IMG/M
3300027860\|Ga0209611_10397274	Not Available	790	Open in IMG/M
3300027860\|Ga0209611_10419861	Not Available	763	Open in IMG/M
3300027860\|Ga0209611_10436501	Not Available	744	Open in IMG/M
3300027860\|Ga0209611_10471165	Not Available	709	Open in IMG/M
3300027860\|Ga0209611_10471913	Not Available	708	Open in IMG/M
3300027860\|Ga0209611_10480617	Not Available	700	Open in IMG/M
3300027860\|Ga0209611_10500454	Not Available	682	Open in IMG/M
3300027860\|Ga0209611_10545957	Not Available	646	Open in IMG/M
3300027860\|Ga0209611_10578266	Not Available	622	Open in IMG/M
3300027860\|Ga0209611_10611726	Not Available	600	Open in IMG/M
3300027860\|Ga0209611_10612349	Not Available	600	Open in IMG/M
3300027860\|Ga0209611_10641348	Not Available	582	Open in IMG/M
3300027860\|Ga0209611_10644004	Not Available	580	Open in IMG/M
3300027860\|Ga0209611_10648829	Not Available	577	Open in IMG/M
3300027860\|Ga0209611_10675706	Not Available	562	Open in IMG/M
3300027860\|Ga0209611_10688360	Not Available	555	Open in IMG/M
3300027860\|Ga0209611_10698370	Not Available	550	Open in IMG/M
3300027860\|Ga0209611_10724107	Not Available	537	Open in IMG/M
3300027860\|Ga0209611_10735278	Not Available	531	Open in IMG/M
3300027860\|Ga0209611_10748510	Not Available	525	Open in IMG/M
3300027860\|Ga0209611_10750404	Not Available	524	Open in IMG/M
3300027860\|Ga0209611_10764071	Not Available	518	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Peat Moss	Host-Associated → Plants → Peat Moss	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	100.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009697	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116229_101485391	3300009500	Host-Associated	VLINTRVDRDFIGKNFVKQNRLRRKQKTNPYLLNIINKILYRNQIIRETEPLKIKIKEQVIIVKFDIVLIFKNVILKNN*
Ga0116229_102371761	3300009500	Host-Associated	LINTRVEGDFISKDFVKQNRLRQKRKTNSYLLNIIDKIPYRNQIIQETELLEIEIKEQVMIVKFDIVLISKDVILGDN*
Ga0116229_104637741	3300009500	Host-Associated	LIDTRVNRDFISKDFVKRNKLRQKRKTDPYLLNTINKILYKNRITRETELLKVEIKGRTIIVKFDIVLISKDVILGDN*
Ga0116229_104775371	3300009500	Host-Associated	VLINTRVDKDFINKEFVKQNRLRQKQKTNPYLLNTINKIPFQNRITRKTELLEVKIKERVIIVVFNIVLISKDVILGDN*
Ga0116229_105598541	3300009500	Host-Associated	VLINTRVDRDFISKDFVKRNRLRQKRKTNPYLLNTIDKIPYRNRITQETELLKIKIKERIIKVKFNIVLIFKNIILGDN*
Ga0116229_105830351	3300009500	Host-Associated	ETTALINTRVNRDFISKEFVKRNRLRQKQKTNPYLLNIINKIPYQNRITRETEPLEVEIEGRVIIVKFNIVLISKNIILGDN*
Ga0116229_106033721	3300009500	Host-Associated	KQNRLRQKQKTNPYLLNIINKILYRNQIIRETEPLEEEIKRQVIIIKFDIVLISKDVILGDN*
Ga0116229_106492641	3300009500	Host-Associated	VKQNRLRQKQKTNPYLLNIIDKIPYRNQTTRETEPLEIEIERQVRIVKFDIVLISKDVILGDD*
Ga0116229_106556321	3300009500	Host-Associated	SKEFVKQNKIRQKQKTNSYLLNTIDEIPYRKRITRETDLLEIEIKEQVIIVKFNIVLISKNVILRDN*
Ga0116229_107817141	3300009500	Host-Associated	VIFSTEFVKRNRLRQKQKTNPYLLNIIDEIPYQNRITQETEPLEVEIEGQVIIVKFDIVLISKDVILGDD*
Ga0116229_107897751	3300009500	Host-Associated	QNRLRQKQKTNPYLLNTINKILYRNRIIQETELLKVEIKKQVIIIKFDIVLISKNVILKNN*
Ga0116229_107934101	3300009500	Host-Associated	INTGVDRDFISKDFVKQNRLRQKQKTNPYLLNTINKIPYRNRIIRETEPLEVEIEGRVMTVKFDIVLISKDVILGNN*
Ga0116229_109825301	3300009500	Host-Associated	MLINTRVDRDFISKDFVKQNKLRQKQKTNPYLLNTINKILYRNRITRETEPLEVEIKEQVIIVKFDIVLISKNIILGNN*
Ga0116229_109997561	3300009500	Host-Associated	IDTRVDRDFISKDFVKQNRLQKQKTNPYLLNIINKILYRNQITRETELLEIKIEERIIKVKFDIVLIFKNIILGDN
Ga0116229_110403001	3300009500	Host-Associated	TRVNRDFISKDFVKQNKLRQKQKTNPYLLNTINKIPYKNRITRETELLKIEIKGRVIIVKFDIVLISKNVILGDN*
Ga0116229_110771761	3300009500	Host-Associated	DFVSKDFIKQNRLRQKQKTNPYLLNTINKILYRNRIIRETEPLKIEIEGRTIKIKFNIVLISKNIILRDN*
Ga0116229_110859341	3300009500	Host-Associated	EFVKQNKLRQKQKTNPYLLNIINKIPYRNQITRETEPLEVEIEGRVIIVKFDIVLISKNVIQGDN*
Ga0116229_110899051	3300009500	Host-Associated	RLLANYLLRVKGRETTALINTRVDRDFISKDFVKQNRLRQKRKTNPYLLNIINKIPYRNRITQETEPLKVEIKGRTIVVKFDIVLISKDVILGDD*
Ga0116229_111068662	3300009500	Host-Associated	VLIDTRVDRDFISKDFAKQNKLRQKQKTNPYLLNIIDKILYRNQITRETELLEVEIKEQVIIVKFDIVLISKDVILGDN*
Ga0116229_111342431	3300009500	Host-Associated	TRVDRDFISKDFVKQNRLQKRKTNPYLLNTINKILYRNRITQETEPLKVEIKGRVIKVKFNIVLISKDVILGDN
Ga0116229_111584871	3300009500	Host-Associated	LTRLLANYLLRVKERETAALINTRVDRDFISKDFVKRNRLRKKRKTNSYLLNIINKILYKNRITRETELLEVEIKKRTIIVKFDIVLISKNIILGNN*
Ga0116229_112150401	3300009500	Host-Associated	KDFVKQNRLRQKRKTNPYLLNIIDEIPYRNRITRETEPLEVEIEGRVMTVKFNIVLISKDVILGDD*
Ga0116229_112657421	3300009500	Host-Associated	QKQKTNPYLLNTINKIPYRNRIIQETEPLEVEIKGRIIKVKFDIVLISKDVILRDN*
Ga0116229_112905171	3300009500	Host-Associated	LIDTRVDRDFISKDFVKQNRLRQKRKTNPYLLNTINKIPYRNRITRETEPLEVEIKERTMIVKFDIVLISKDIILRNN*
Ga0116229_114421931	3300009500	Host-Associated	DFISKDFVKRNRLRQKRKTNPYLLNTINKILYRNQITRETELLEIEIEGRTIRVKFDIVLISKDVILGDN*
Ga0116229_114726101	3300009500	Host-Associated	EGDFISKDFVKQNRLRQKQKTNSYLLNIINKILYRNRIIRETELLKVEIKKQVIIVKFDIVLISKNVILGDN*
Ga0116229_114740731	3300009500	Host-Associated	ALIDTRVDRDFISKDFVKQNRLRQKRKTNPYLLNTINKILYKNQITRETEPLEVEIERRVIIVKFDIVPIFKDVI*
Ga0116229_114994441	3300009500	Host-Associated	DFISKDFVKQNKLRQKRKTNPYLLNIINKILYRNRITQETELLKIKIKGQVIIVKFNIVLISKNIILGDN*
Ga0116229_115044051	3300009500	Host-Associated	DRDFISKDFVKQNRLRQKQKTNSYLLSVIDKIPYRNRIIRETELFEVEIKERVIKVIFDIVLISKDVILGDN*
Ga0116229_115576111	3300009500	Host-Associated	DFISKDFVKQNRLRQKRKTNPYLLNTINKIPYRNRIMETELLEVEIKEQTMTVKFDIVLISKDVILGDN
Ga0116229_115940401	3300009500	Host-Associated	SKDFVKQNRLQKRKTNSYLLNTINKILYRNRIIRETELLEVEIEERIIVVKFDITLISKDVILGDN
Ga0116229_116400401	3300009500	Host-Associated	SKDFVKQNKLRQKQKTNSYLLNTINKILYRNRIIQETELLKIEIKGQVTIVKFDIVLISKNIILGDN*
Ga0116231_103640561	3300009697	Host-Associated	LLRNTGVDRDFMSKDFVKQNKLRQKQKTNSYLLNTINKILYRNRIIQETELLKIEIKGQVTIVKFDIVLISKNIILGDN*
Ga0116231_103806921	3300009697	Host-Associated	RDFISKEFVKQNRLQKQKTNSYLLNIINKIPYKNQIIRETELLKIEIKERVIIVKFDIILISKNIILGDN
Ga0116231_103849221	3300009697	Host-Associated	NRLRQKRKTNPYLLNTINKIPYRNQITQETKLLKIEIEERTIKVKFDIVLISKNIILGDN
Ga0116231_104050181	3300009697	Host-Associated	LINTRVDKDFISKDFVKRNRLRQKRKTNPYLLNIINKIPYRNRIIQETKPLKVEIKEQIIIVKFDIVLIFKNVILGDN*
Ga0116231_104393531	3300009697	Host-Associated	LTRLLANYLLRVKGQETTALIDTRVDRDFISKDFVKQNRLQKQKTNPYLLNTIDKIPYRNRITQETELLKIEIEERTIKVKFNIVLISKDVILGDN
Ga0116231_104818871	3300009697	Host-Associated	TRVDRDFISKDFVKQNRLRQKQKTDLYLLNTINKILYKNQITQETELLEVEIEKRTIKVKFDIVLISKNIILGNN*
Ga0116231_104858331	3300009697	Host-Associated	IDTRVDRDFISKDFVKQNRLRQKRKTNPYLLNTIDEILYKNQITRETELLEVEIKRRIIIVKFDVVLISKNIILGDN*
Ga0116231_105678641	3300009697	Host-Associated	LINTRVDRDFISKDFVKQKTNSYLLNTINKILYRNQITRETELLKIKIKRRVIKVKFDIVLISKNVILGDN*
Ga0116231_106038341	3300009697	Host-Associated	TRVDKDFISKDFVKQNRLRQKRKTNSYLLNTINKILYKNRITRETELLEIEIKEKAIKVKFNIILISKNIILGDN*
Ga0116231_106128421	3300009697	Host-Associated	QKQKTNLYLLNTINKILYKNRIIRETEPLEVEIKERVIIVKFDIVLISKNIILGDN*
Ga0116231_106394491	3300009697	Host-Associated	RIKEQETTALIDTRVDRDFISKDFVKQNRLRQKQKTNPYLLNTINKILYRNRITKETEPLEIKIKERIIKVKFNIVLIFKDVILGDN*
Ga0116231_106940241	3300009697	Host-Associated	VLINTRVDRDFISKDFVKQNRLRQKQKTNSYLLNTINKILYRNRIIQETEPLKVKIEGQIILVKFNIVLIFKNVILGDN*
Ga0116231_107102181	3300009697	Host-Associated	TRVDRDFISKDFVKQNRLRQKQKTNPYLLNTINKIPYKNRIIQETELLEIEIEGRTIKVKFNIILISKDIILGDN*
Ga0116231_107115601	3300009697	Host-Associated	SKDFVKQNKLRQKQKTNPYLLNTINKIPYKNRIIRETKPLKVEIKGRVITVKFDIVLISKNIILRDN*
Ga0116231_107251541	3300009697	Host-Associated	RLRQKQKTNPYLLNTINKIPYRNRITQETELLKIEIKGRTIKVKFNIVLISKDIILGDN*
Ga0116231_107308591	3300009697	Host-Associated	VLIDTRVDRDFISKNFVKRNKLRQKQKTNPYLLNTINKIPYKNRIIRETELLEVKIKRRTIKVKFDV
Ga0116227_102890441	3300009709	Host-Associated	MLINTRVDKDFISKDFVKQNKLRQKQKINPYLLNTINKILYKNRIIRKTELLKIEIKEQVIKIKFNIVLRFKNIILGDN*
Ga0116227_103042261	3300009709	Host-Associated	VLIDTRVEGDFISKDFVKQNRLRQKQKTNPYLLNTINKILYRNRIIRETELLEVKIKGRTIKVKFDIVLISKNIILGNN*
Ga0116227_104503281	3300009709	Host-Associated	VKERETTVLINTRVDRDFISKDFVKQNKLRQKQKTNSYLFNIIDKILYRNQIIRETKPLEVEIKEQIIIVKFDIALISKDVILGDN*
Ga0116227_104837651	3300009709	Host-Associated	MLINIGVNKDFISKDFVKQNRLRQKQKTNPYLLNIINKILYRNRIIQETELLKVEIKERTIKVKFDIVLISKNIILGNN*
Ga0116227_105149511	3300009709	Host-Associated	KQNRLRQKRKTNSYLLNTINKILYRNQITQETELLEIEIKERTIKVKFDIVLIFKDVILGDN*
Ga0116227_105750391	3300009709	Host-Associated	NRLRQKQKTNPYLLNTIDKILYRNRITRETKLLKIEIEEQTIKVRFDIVLISKDVILGDN
Ga0116227_105805051	3300009709	Host-Associated	MRLLANYLLRVKGQETTALIDTRVDRDFISKDFVKQNRLRQKRKTNSYLLNTIDKIPYKNRIIRETELLEIKIKGRTIKVKFDIVLISKNVILGDD*
Ga0116227_106213351	3300009709	Host-Associated	NRLRQKRKTNPYLLNTINKIPYRNRITRETEPLEIEIEGRIIKVKFDIVLISKDVILGDN
Ga0116227_107505831	3300009709	Host-Associated	LRQKQKTNPYLLNIINKIPYRDRITRETEPLKLEIKGRVITVKFDIVLIFKNIILGDN*
Ga0116227_108263551	3300009709	Host-Associated	LINTGVDKDFISKDFVKQNKLRQKRKTNPYLLNTINKILYRNRITRETNPLKVEIKEQVIIVKFNIVLISKNIILGDN*
Ga0116227_108307341	3300009709	Host-Associated	VLINTRVDRDFISKDFVKQNRLQQKQKTNPYLLNTINKILYKNQIIQKTELLKIEIEERIIKVKFNIVLISKNIILGDN*
Ga0116227_108315691	3300009709	Host-Associated	VRRNRLRQKQKTNPYLLNTINKIPYRNRIIKETELLKVEIKRRVIIVKFDIVLISKNVILGDN*
Ga0116227_108691041	3300009709	Host-Associated	DFISKDFVKQNRLRQKQKTNPYLLNTINKIPYRNRITQETELLEIKIEERTIKVKFDIVLISKNVILGDN*
Ga0116227_108751231	3300009709	Host-Associated	ARLLANYLLRVKERETTTLINTRVDRDFVSKDFIKQNRLRQKQKTNPYLLKTINKILYRNRIIRETEPLKIEIEGRTIKIKFDIVLISKNIILRDN*
Ga0116227_108834432	3300009709	Host-Associated	DRDFISKDFVKQNRLRQKRKTNPYLLNTIDEILYRNRIIRETELLKIEIKEQTIKVKFNIVLIFKDVILGDN*
Ga0116227_109316781	3300009709	Host-Associated	FVKQNRLRQKRKTNPYLLNTINKILYRNQITRETELLEIKIEGRTIKVKFDIVLISKDVILGNN*
Ga0116227_109927711	3300009709	Host-Associated	LINTRVDRDFISKEFVKQNRLQKQKTNPYLLNIINEIPYQNRITRETKPLEVEIKEQVIIVKFNIVLISKDVILEDN
Ga0116227_110034991	3300009709	Host-Associated	KQNRLRQKRKTNPYLLNTINKIPYRNRITRETELLEIEIEGRIIKVRFNIVLISKDVILGDN*
Ga0116227_110327481	3300009709	Host-Associated	NRLRQKRKTNPYLLNTIDKIPYKNRITRETELLEVKIKERIIKVKFDIVLIFKNIILRDN
Ga0116227_110733081	3300009709	Host-Associated	VLINTRVDRDFTSKELAKQNRLRQKQKTNSYLLNIINKIPYRNRIIQETEPLEVEIKGRVIIVKFDIVLISKDVILGDN*
Ga0116227_111414202	3300009709	Host-Associated	VLINTRVERDFISKDFVKQNRLRQKQKTDPYLLNIINKILYKNRIIRETEPLKVEIEGRVIIVKFDIVLI
Ga0116227_111431701	3300009709	Host-Associated	QKTNPYLLNTINKILYKNQITRETEPLEIEIEGRVIIVRFNIILISKDVILGDN*
Ga0116227_112290741	3300009709	Host-Associated	FISKDFVKQNRLRQKQKTNPYLLNTINKILYRNRITQETEPLKVEIKKRVIIVRFDIVLISKNVILGDN*
Ga0116227_112507211	3300009709	Host-Associated	NRLRQKRKTNPYLLNTINKILYKNRIIRETELLEIEIKERIIKVKFDIVLISKDVILGDN
Ga0116227_112752601	3300009709	Host-Associated	TRVDRDFISKEFVRQNRLRQKRKTNPYLLNTINKIPYRNRITRETEPLKVEIKERVIIVKFDIVIISKNVILGDN*
Ga0116227_113126161	3300009709	Host-Associated	KDFVKQNRLRQKQKTNPYLLNIINKIPYRNRITQKTELLEVEIKERIIIVKFDVVLIFKNVILEDN*
Ga0116227_113309301	3300009709	Host-Associated	KQKTNLYLLNTINKILYKNRIIQETEPLEVEIKEQVIIVKFDIVLISKDIILRDN*
Ga0116227_113503121	3300009709	Host-Associated	ETTALIDTRVDRDFISKDFVKQNRLRQKQKTNSYLLNTINKIPYRNRITQEIEPLEIEIEERTIKVKFDIVLISKDVILGDN*
Ga0116227_113817201	3300009709	Host-Associated	KNFVKQNRLRQKRKTNPYLLNTINKIPYRNRITQETELLKIEIEERTIKVKFDIVLISKDVILGDN*
Ga0116227_113907791	3300009709	Host-Associated	TALINTRVDRDFISKDFVEQNKLRQKQKTNPYLLNTINKILYKNRIIRETEPLEVEIKEQVIIVKFDIVLISKDVILGDN*
Ga0116227_115160711	3300009709	Host-Associated	TTALIDTRVDRDFISKDFVKQNGLRQRRKTNPYLLNIINKIFYRNRIIRETKLLEVEIKERTIIVKFDIVLISKDVILGDN*
Ga0116227_115179631	3300009709	Host-Associated	FVKQNRLRQKQKTNSYLLNTINKILYRNQITRETEPLKIEIKRRVIIVKFDIVLISKNIILGDN*
Ga0209611_102131751	3300027860	Host-Associated	LINTRVDRDFISKDFVKQNRLRQKRKTNPYLLNIINKILYRNQIIQETELLKIEIEEQIIIVRFDIVLISK
Ga0209611_102343331	3300027860	Host-Associated	VLINTRVDRDFISKDFVKRNRLRQKRKTNPYLLNTIDKIPYRNRITQETELLKIKIKERIIKVKFNIVLIFKNIILGDN
Ga0209611_102912141	3300027860	Host-Associated	LINTGVDRDFISKDFVKQNKLRQKRKTNPYLLNIINKILYRNRITRETEPLEVEIKGRVIIVKFDIVLISKDVILRDN
Ga0209611_103029231	3300027860	Host-Associated	DFISKEFVKQNRLRHKQKTNPYLLNIINKIPYQNRIIRETELLEVEIEEQVIIVKFDIILILKNVILGDN
Ga0209611_103249751	3300027860	Host-Associated	RVDRDFISKDFVKQNRLRQKRKTNPYLLNIINKIPYKNRIIQETGLLEVEIKERVIIVKFDIVLISKDVILGDN
Ga0209611_103365841	3300027860	Host-Associated	QNRLRQKQKTNLYLLNIINKILYQNQITRETEPLEVEIEGRVIIVKFDIVLISKDIILGD
Ga0209611_103377851	3300027860	Host-Associated	ISKEFVKQNRLRQKRKTNPYLLNIINKIPYQNRITRETEPLEVEIEGRVIIVKFNIVLISKNIILGDN
Ga0209611_103379741	3300027860	Host-Associated	LINTGVDRDFISKDFVKQNRLRQRRKTNPYLLNIIDKIPYKNRITQETELLEVEIKERTIIVKFDIVLISKDVILGDN
Ga0209611_103972741	3300027860	Host-Associated	LIDTRVDRDFISKDFVKQNRLRQKRKTNPYLLNTINKIPYRNRITRETEPLEVEIKERTMIVKFDIVL
Ga0209611_104198611	3300027860	Host-Associated	NRLRQKQKTNPYLLNTINKILYKNQITQETELLEIKIKEQTIRVKFDIVLIFKDIILGDN
Ga0209611_104365011	3300027860	Host-Associated	ISKDFIKQNRLRQKQKTNPYLLNIINKILYRNQIIRETEPLEEEIKRQVIIIKFDIVLISKDVILGDN
Ga0209611_104711651	3300027860	Host-Associated	WQIIYCALKDKRLRQKRKTNPYLLNIIDEIPYRNRITRETEPLEVEIEGRVMTVKFNIVLISKDVILGDD
Ga0209611_104719131	3300027860	Host-Associated	VLINTRVDKDFINKEFVKQNRLRQKQKTNPYLLNTINKIPFQNRITRKTELLEVKIKERVIIVVFNIVLISKDVILGDN
Ga0209611_104806171	3300027860	Host-Associated	VLIDTRVDRDFISKDFAKQNKLRQKQKTNPYLLNIIDKILYRNQITRETELLEVEIKEQVIIVKFDIVLISKDVILGDN
Ga0209611_105004541	3300027860	Host-Associated	EGDFISKDFVKQNRLRQKQKTNSYLLNIINKILYRNRIIRETELLKVEIKKQVIIVKFDIVLISKNVILGDN
Ga0209611_105459571	3300027860	Host-Associated	PSDRTRYKNRLRQKQKTNPYLLNIINKILYRNRITQKTELLEVEIKERIIIVKFDVVLIFKNVILEDN
Ga0209611_105782661	3300027860	Host-Associated	VLIDTRVDRDFISKDFVKRNRLRQKQKTNLYLLNTIDKIPYRNRIIRETEYLEVEIKERVMTVKFDIVLISKNIILGDD
Ga0209611_106117261	3300027860	Host-Associated	RQKRKTNPYLLNIINKIPYRNQIIRETELLEIKIEERIIKVKFNIVLISKDIILGDN
Ga0209611_106123491	3300027860	Host-Associated	VLINTRVDRDFIGKNFVKQNRLRRKQKTNPYLLNIINKILYRNQIIRETEPLKIKIKEQVIIVKFDIVLIFKNVILKNN
Ga0209611_106413481	3300027860	Host-Associated	LINTRVDKDFISKDFVRQNRLRQTRKTNSYLLNIINKILYKSRITQETELLKIEIEERVIIVKFDIVLISKDVILRDN
Ga0209611_106440041	3300027860	Host-Associated	RDFISKDFVKQNRLXQKQKTNPYLLNIINKILYRNQITRETELLEIKIEERIIKVKFDIVLIFKNIILGDN
Ga0209611_106488291	3300027860	Host-Associated	DTRVEGDFISKDFVKRNRLRQKRKTNPYLLNTINKILYRNQITRETELLEIEIEGRTIRVKFDIVLISKDVILGDN
Ga0209611_106757061	3300027860	Host-Associated	VDRDFISKDFVKQNKLRQKQKTNPYLLNIINKILYKNRIIRETEPLEVEIKERVIIVKFDIVLIFKNVILGDN
Ga0209611_106883601	3300027860	Host-Associated	TTVLINTRVNRDFISKDFIKQNRLRQKQKTNSYLLNTINKILYRNRITRETEPFKVEIKRRVIIVKFDIVLISKDVILGDN
Ga0209611_106983701	3300027860	Host-Associated	DTRVNRDFISKDFVKQNKLRQKQKTNPYLLNTINKIPYKNRITRETELLKIEIKGRVIIVKFDIVLISKNVILGDN
Ga0209611_107241071	3300027860	Host-Associated	DFVKQNRLRQKRKTNLYLLNTINKILYRNRIIRETELLEVEIKGQIIIVKFDIVLIFKNVILGDN
Ga0209611_107352781	3300027860	Host-Associated	VDRDFVSKDFVKQNRLRQKRKTNSYLLNTINKIPYKNRIIRETELLEVEIKEQIIRVKFDIVLISKDVILRDN
Ga0209611_107485101	3300027860	Host-Associated	FISKDFVKQNELRQKRKTNPYLLNTINKILYKNRITRETELLEIEIEGRTIKVKFDIVLISKDIILGDN
Ga0209611_107504041	3300027860	Host-Associated	VLIDTRAEGDFISKDFVKQNKLXQKQKTNPYLLNIINKILYKNRITRETKPLKVEIKKQVIIIKFNIVLISKDIILRDN
Ga0209611_107640711	3300027860	Host-Associated	VLINTRVDRDFISKEFVKQNRLRQKRKTNPYLLNIINKIPYRNQITREKKLLEVEIKGQVIIVKFNIVLISKDIILGDN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086497

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences