Metagenome Family F086524

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086524
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	102 residues
Representative Sequence	MPDNPNTDNPPIETEAWEIAFKPYATDADAAFDLARRLMEVKEYLTAKPPNLSMAKEALDEACELLFPFTDFYKAAYDLYLTFIEGTPTKAQEDLMDSLGIRY
Number of Associated Samples	71
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.55 %
% of genes near scaffold ends (potentially truncated)	27.27 %
% of genes from short scaffolds (< 2000 bps)	74.55 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.182 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (15.454 % of family members)
Environment Ontology (ENVO)	Unclassified (71.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (87.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.96% β-sheet: 0.00% Coil/Unstructured: 45.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF12728	HTH_17	22.73
PF01381	HTH_3	16.36
PF13560	HTH_31	12.73
PF12844	HTH_19	9.09
PF13414	TPR_11	1.82
PF04434	SWIM	1.82
PF13551	HTH_29	0.91
PF08401	ArdcN	0.91
PF16158	N_BRCA1_IG	0.91
PF08861	DUF1828	0.91
PF03928	HbpS-like	0.91
PF07589	PEP-CTERM	0.91
PF13588	HSDR_N_2	0.91
PF08822	DUF1804	0.91
PF13714	PEP_mutase	0.91
PF10282	Lactonase	0.91
PF07411	DUF1508	0.91
PF12704	MacB_PCD	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	1.82
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	1.82
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	1.82
COG3422	Uncharacterized conserved protein YegP, UPF0339 family	Function unknown [S]	0.91
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
All Organisms	root	All Organisms	31.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
cellular organisms	root	All Organisms → cellular organisms	31.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	9.09 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.82 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.82 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.91 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.91 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.82 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.91 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.91 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.91 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.91 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.82 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.91 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.91 %
Massilia group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group	0.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.82 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.91 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.91 %
Massilia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	0.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.82 %
Massilia armeniaca	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia armeniaca	0.91 %
Rhodococcus hoagii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus hoagii	0.91 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000953\|JGI11615J12901_11687910	Not Available	892	Open in IMG/M
3300003203\|JGI25406J46586_10006753	All Organisms → cellular organisms → Bacteria	5275	Open in IMG/M
3300003203\|JGI25406J46586_10105969	Not Available	835	Open in IMG/M
3300003324\|soilH2_10440641	Not Available	1563	Open in IMG/M
3300004479\|Ga0062595_101376373	Not Available	641	Open in IMG/M
3300005290\|Ga0065712_10068242	All Organisms → cellular organisms → Bacteria → Acidobacteria	12499	Open in IMG/M
3300005290\|Ga0065712_10068651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	9498	Open in IMG/M
3300005293\|Ga0065715_10093342	All Organisms → cellular organisms → Bacteria	4707	Open in IMG/M
3300005293\|Ga0065715_10096313	All Organisms → cellular organisms → Bacteria	3904	Open in IMG/M
3300005330\|Ga0070690_100424676	Not Available	981	Open in IMG/M
3300005331\|Ga0070670_100000256	All Organisms → cellular organisms → Bacteria	48122	Open in IMG/M
3300005334\|Ga0068869_101924833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus hoagii	530	Open in IMG/M
3300005340\|Ga0070689_101429942	Not Available	625	Open in IMG/M
3300005344\|Ga0070661_101031305	Not Available	683	Open in IMG/M
3300005345\|Ga0070692_11211062	Not Available	538	Open in IMG/M
3300005353\|Ga0070669_100086207	All Organisms → cellular organisms → Bacteria	2346	Open in IMG/M
3300005441\|Ga0070700_100188974	Not Available	1439	Open in IMG/M
3300005444\|Ga0070694_101089910	Not Available	666	Open in IMG/M
3300005539\|Ga0068853_100331959	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300005544\|Ga0070686_100847648	Not Available	740	Open in IMG/M
3300005545\|Ga0070695_100279429	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300005545\|Ga0070695_100362224	Not Available	1089	Open in IMG/M
3300005564\|Ga0070664_101986560	Not Available	552	Open in IMG/M
3300005577\|Ga0068857_101587067	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300005578\|Ga0068854_102158680	Not Available	515	Open in IMG/M
3300005615\|Ga0070702_100899835	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300005616\|Ga0068852_100054052	All Organisms → cellular organisms → Bacteria	3460	Open in IMG/M
3300005616\|Ga0068852_101012104	Not Available	850	Open in IMG/M
3300005616\|Ga0068852_101147507	Not Available	798	Open in IMG/M
3300005616\|Ga0068852_102097380	Not Available	587	Open in IMG/M
3300005617\|Ga0068859_100109638	Not Available	2822	Open in IMG/M
3300005617\|Ga0068859_100241442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1896	Open in IMG/M
3300005617\|Ga0068859_100459229	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300005718\|Ga0068866_11471623	Not Available	500	Open in IMG/M
3300005842\|Ga0068858_101895651	Not Available	589	Open in IMG/M
3300005843\|Ga0068860_100077714	Not Available	3157	Open in IMG/M
3300005844\|Ga0068862_101101925	Not Available	789	Open in IMG/M
3300005844\|Ga0068862_101753127	Not Available	630	Open in IMG/M
3300005844\|Ga0068862_101869441	Not Available	610	Open in IMG/M
3300005985\|Ga0081539_10011986	All Organisms → cellular organisms → Bacteria	6756	Open in IMG/M
3300009092\|Ga0105250_10146326	Not Available	981	Open in IMG/M
3300009101\|Ga0105247_10505488	Not Available	881	Open in IMG/M
3300009148\|Ga0105243_10686743	Not Available	996	Open in IMG/M
3300009148\|Ga0105243_10883938	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300009148\|Ga0105243_11760848	Not Available	650	Open in IMG/M
3300009174\|Ga0105241_10125320	All Organisms → cellular organisms → Bacteria → Acidobacteria	2073	Open in IMG/M
3300009174\|Ga0105241_10859965	Not Available	839	Open in IMG/M
3300009174\|Ga0105241_11545025	Not Available	640	Open in IMG/M
3300009174\|Ga0105241_12373721	Not Available	529	Open in IMG/M
3300009176\|Ga0105242_10058588	Not Available	3158	Open in IMG/M
3300009176\|Ga0105242_10209638	Not Available	1736	Open in IMG/M
3300009176\|Ga0105242_12455285	Not Available	569	Open in IMG/M
3300009177\|Ga0105248_10050089	All Organisms → cellular organisms → Bacteria → Acidobacteria	4684	Open in IMG/M
3300009177\|Ga0105248_11023155	Not Available	933	Open in IMG/M
3300009177\|Ga0105248_11605408	Not Available	737	Open in IMG/M
3300009545\|Ga0105237_10069819	All Organisms → cellular organisms → Bacteria → Acidobacteria	3509	Open in IMG/M
3300009545\|Ga0105237_10228673	All Organisms → cellular organisms → Bacteria	1861	Open in IMG/M
3300009545\|Ga0105237_10264467	Not Available	1723	Open in IMG/M
3300009545\|Ga0105237_11649290	Not Available	648	Open in IMG/M
3300009551\|Ga0105238_11111963	Not Available	813	Open in IMG/M
3300009553\|Ga0105249_10000503	All Organisms → cellular organisms → Bacteria	36164	Open in IMG/M
3300010045\|Ga0126311_10000005	All Organisms → cellular organisms → Bacteria	165937	Open in IMG/M
3300010046\|Ga0126384_10081352	Not Available	2335	Open in IMG/M
3300010375\|Ga0105239_11382219	Not Available	813	Open in IMG/M
3300010397\|Ga0134124_10495932	Not Available	1180	Open in IMG/M
3300010397\|Ga0134124_11943626	Not Available	624	Open in IMG/M
3300010397\|Ga0134124_11976790	Not Available	620	Open in IMG/M
3300010397\|Ga0134124_13191412	Not Available	502	Open in IMG/M
3300010399\|Ga0134127_12766702	Not Available	570	Open in IMG/M
3300010401\|Ga0134121_11998599	Not Available	612	Open in IMG/M
3300010403\|Ga0134123_12334601	Not Available	599	Open in IMG/M
3300010403\|Ga0134123_13472239	Not Available	510	Open in IMG/M
3300013102\|Ga0157371_10589266	Not Available	826	Open in IMG/M
3300013307\|Ga0157372_11945505	Not Available	676	Open in IMG/M
3300014325\|Ga0163163_10485690	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300014325\|Ga0163163_10973079	Not Available	912	Open in IMG/M
3300014325\|Ga0163163_11186562	Not Available	826	Open in IMG/M
3300014326\|Ga0157380_10623411	Not Available	1071	Open in IMG/M
3300014326\|Ga0157380_12452783	Not Available	587	Open in IMG/M
3300025900\|Ga0207710_10000718	All Organisms → cellular organisms → Bacteria	18428	Open in IMG/M
3300025911\|Ga0207654_11111079	Not Available	576	Open in IMG/M
3300025914\|Ga0207671_10099123	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	2205	Open in IMG/M
3300025914\|Ga0207671_11028600	Not Available	648	Open in IMG/M
3300025914\|Ga0207671_11080025	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300025920\|Ga0207649_11545513	Not Available	525	Open in IMG/M
3300025923\|Ga0207681_10076815	Not Available	2346	Open in IMG/M
3300025925\|Ga0207650_10000005	All Organisms → cellular organisms → Bacteria	663190	Open in IMG/M
3300025934\|Ga0207686_10061882	Not Available	2375	Open in IMG/M
3300025934\|Ga0207686_10118362	Not Available	1799	Open in IMG/M
3300025935\|Ga0207709_10167791	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300025936\|Ga0207670_11175477	Not Available	649	Open in IMG/M
3300025938\|Ga0207704_11961521	Not Available	504	Open in IMG/M
3300025940\|Ga0207691_10530869	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	998	Open in IMG/M
3300025945\|Ga0207679_10496615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia armeniaca	1088	Open in IMG/M
3300025945\|Ga0207679_10891772	Not Available	813	Open in IMG/M
3300025960\|Ga0207651_10810861	Not Available	830	Open in IMG/M
3300025961\|Ga0207712_10000695	All Organisms → cellular organisms → Bacteria → Acidobacteria	25951	Open in IMG/M
3300026035\|Ga0207703_10542538	Not Available	1096	Open in IMG/M
3300026035\|Ga0207703_11164422	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300026075\|Ga0207708_10211799	Not Available	1549	Open in IMG/M
3300026095\|Ga0207676_12145799	Not Available	557	Open in IMG/M
3300026118\|Ga0207675_100135779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2334	Open in IMG/M
3300026142\|Ga0207698_10069210	Not Available	2790	Open in IMG/M
3300026142\|Ga0207698_10672637	Not Available	1028	Open in IMG/M
3300028380\|Ga0268265_11822046	Not Available	615	Open in IMG/M
3300028380\|Ga0268265_11884234	Not Available	605	Open in IMG/M
3300028381\|Ga0268264_10013031	All Organisms → cellular organisms → Bacteria → Acidobacteria	6834	Open in IMG/M
3300028381\|Ga0268264_10041830	Not Available	3791	Open in IMG/M
3300028381\|Ga0268264_10326738	Not Available	1452	Open in IMG/M
3300032205\|Ga0307472_102302082	Not Available	545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	77.27%
Environmental	Environmental	22.73%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	77.27%
Terrestrial	Environmental → Terrestrial	22.73%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	41.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	32.73%
Soil	Environmental → Terrestrial → Soil	22.73%
Roots	Host-Associated → Plants → Roots	2.73%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	31.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	29.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	12.73%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.64%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.73%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	31.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	29.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.64%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.91%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	15.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	12.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	8.18%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	8.18%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	7.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	7.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	3.64%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.91%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11615J12901_116879101	3300000953	Soil	MQDNPITDNPPIETEAWEIALKPYATDADAALDLACRLMEVKQYLKAKPPNVSLAVLALDEACELLFPFTEFRQTAYNLYLTFIEGRPTKAQEDLIESLGIRY*
JGI25406J46586_100067538	3300003203	Tabebuia Heterophylla Rhizosphere	MPDHPSTDTPPIETEAWEIAFKPYATDAEAAFDLARRLMEVKQYLKATPPDLSMAMEALDEACEILFPFTEFYKAAYDLYLTFIEGTPTKAQEDLMDSLGISY*
JGI25406J46586_101059691	3300003203	Tabebuia Heterophylla Rhizosphere	PDNPNTDNPPIETEAWEIAFKPYATDADAAFDLARRLMEVKEYLTAKPPNLSMAKEALDEACELLFPFTDFYKAAYDLYLTFIEGTPTKAQEDLMDSLGIRY*
soilH2_104406415	3300003324	Sugarcane Root And Bulk Soil	WEIAFKPYTTDAAAAFDLARRLLEVKRLLQTEPPNVSLAKTALDDACERLFPFTEFREVAYDLYLTALDGHPTKAQEDLMASLGIKY*
Ga0062595_1013763731	3300004479	Soil	MPDNPSTATPPIETEAWEIAFKPYATDAEAAFDLAKRLMEVKQYLTAKPPDRSMAIEALDEAVELLFPYTPLYEATYDLYLTFIEGEPTKAQEEIMEALGVRY*
Ga0065712_100682423	3300005290	Miscanthus Rhizosphere	MQDNPSTDNPPIETEAWEIAFKPYATDAEAAFDLARRLMEVKRYLKAKPPNPSLAISALDEAAELLFPFTEFYKATYDLYRTFIEGRPTKAQEDLIESLGIRY*
Ga0065712_100686515	3300005290	Miscanthus Rhizosphere	MQDNPITENPPIETEAWEIAFKPYATDAEAAFDLSRRLMEVKEHLKAKPPNLSMAEEALDEAAELLFPYTDFYKAAYDLYLTFIEGRPTKAQEDLMDSLGVRY*
Ga0065715_100933428	3300005293	Miscanthus Rhizosphere	MNENLTEPLPVETEAWELALRPYASDASAAYDLARRLMEIKQYLKVTPPNVSLAVLALDEAADLLFPFTEFHRATRDLYRVAIEGHATGAQENLMESLGIKY*
Ga0065715_100963131	3300005293	Miscanthus Rhizosphere	AWEIAFKPYATDADAAFDLARRLMEVKRYLKAKPPNPSLAMAALDEAAELLFPFTQFHKASYDLYLTFIEGRPTKAQEDILDALGIRY*
Ga0070690_1004246762	3300005330	Switchgrass Rhizosphere	MPDNPNTDTPPIETEAWEIAFKPYAEDAEAAFDLAKRLMEVKQYLTAKPPDRSMAIEALDEAVELLFPYTPLYEATYDLYLAFIDGTPTKEQEEIMEALGVRY*
Ga0070670_10000025640	3300005331	Switchgrass Rhizosphere	MVKTSEPDPEPFAIESEAWETALKPYSTEAHAAYDLARRLMEIKRFLTTKPPNVSMAVLALDEAAELIFPFTQFHEVAYDLYLTAIDGHPSKAQENLMESLGIRY*
Ga0068869_1019248331	3300005334	Miscanthus Rhizosphere	PDPEPFAIESEAWESALKPYSTEPDAAYDLARRLMEIKQFLKSKPPNVSMAVLALDEAAELIFPFTQFHEVAYDLYLTAIDGHPTKAQENLMESLGIRY*
Ga0070689_1014299421	3300005340	Switchgrass Rhizosphere	MPDDVTTDIEDDESPIETEVWEIALKPYAEDAEAAFDMARRLMEIKELLQAQPPNVSLARVALDDACELLFPFTEFRKAAYDLYLAFIEGTPTKAQEDVLTSLGVKF*
Ga0070661_1010313051	3300005344	Corn Rhizosphere	PPIETEAWEIALKPYATDADAAFDLVRRLMEVKRYLKAKPPNPSMAIAALDEAAELIFPYTEFYRASYDLYLTFIEGRPTKGQEDLIESLGIRY*
Ga0070692_112110621	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MQDDPTTDESDLAPIETEAWEIALKPYATDADAAFDLARRLMEVKRYLKTKPPNLSLAKEALDEACELLFPFTQFYEAALNLYLTFIDVHPTRAQENLMESLGIRY*
Ga0070669_1000862072	3300005353	Switchgrass Rhizosphere	MPDNPNTDTPPIETEAWEIALKPYATDADAAFDMARRLMEIKRLLQTQPPSVSLAKAALDDACELLFPFTEFRKAAYDLYLTFIEGRPTKAQEDLIESLGIRY*
Ga0070700_1001889741	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPDNPNTDNPPIETEAWEIAFKPYATDADAAFDLAKRLMEVKQYLTAKPPNLSLAMVALDEAAELLFPFTEFYKAAYDLYLTFIEGRPTKAQEDLIESLGIRY*
Ga0070694_1010899101	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	DNPSTDTPPIETEAWEIAFKPYATDAEAAFDLAKRLMEVKQYLTAKPPDRSMAIEALDEAVELLFPYTPLYEATYDLYLAFIDGTPTKEQEEIMEALGVRY*
Ga0068853_1003319594	3300005539	Corn Rhizosphere	MVKTSEPDPEPFAIESEAWETALKPYSTEADAAYDLARRLMEIKQFLKSKPPNVSMAVLALDEAAELIFPFTQFHEVAYDLYLTAIDGHPTKA
Ga0070686_1008476482	3300005544	Switchgrass Rhizosphere	MPDNPSTDTPPIETEAWEIALKPYATDADAAFDMARRLMEIKRLLQTQPPSVSLAKAALDDACELLFPFTEFRKAAYDLYLTFIEGRPTKAQEDVLTSLGIRY*
Ga0070695_1002794292	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MQDNPNTENPPIDAEAWEIAFRPYATNAEAAFDLARRLMEVKQYLTAKPPNLSMAEEALDEAAEVLFPFTDFYKAAYDLYLTFIEGRPTKAQEDLMDSLGIRY*
Ga0070695_1003622242	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MVKSSEPDPEPFAIESEAWETALKPYSTEPHAAYDLVRRLMEIKRFLTTKPPNVSMAVLALDEAAELIFPFTQFREVAYDLYLTAIDGHPTKAQENLMESLGIRY*
Ga0070664_1019865601	3300005564	Corn Rhizosphere	MVKNSEPDPEPFAIESEAWESALKPYSTEPDAAYDLARRLMEIKRFLKSKPPNVSMAVLALDEAAELIFPFTQFHEVAYDLYLTAIDGHPTKAEENLMESL
Ga0068857_1015870672	3300005577	Corn Rhizosphere	MPDNPNTDNPPIETEAWEIAFKPYATDAEAAFDLARRLMEVKEYLKTMPPNLSMAKAALDEACEILFPFTQFYKVAYDLYLAFIEGTPTKAQEDLMDS
Ga0068854_1021586801	3300005578	Corn Rhizosphere	NTDNPPIETEAWEIAFKPYATDADAAFDMARRLMEIKRLLQTLPPSVSLAQAALDDACELLFPFTEFRKAAYDLYLTFIEGRPTKAQEDLMDSLGIRY*
Ga0070702_1008998351	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MPDNPNTDNPPIETEAWQIAFKPYATDAEAAFDLSRRFMEVKEYLKAKPPNLSMAEEALDEAAELLFPYTDFYKAAYDLYLTFIEGRPTK
Ga0068852_1000540524	3300005616	Corn Rhizosphere	MVKNSESEPAPIETEAWEIAFKPYATDTDAAYDLARRLMEVKRYLKTKPPNVTLAMEALDEACEILFPFTEFRKVAFDLYLTAIDGHPTRAEENLMESLGIKY*
Ga0068852_1010121042	3300005616	Corn Rhizosphere	MQDNTTTDSEDDESPIETEQWEIALKPYATDADAAFDMARRLMEIKKLLQAQPPNVSVARAALDDACELLFPFTEFSQAAYDLYLTFIAGTPTKAQEDTLTSMGVKF*
Ga0068852_1011475072	3300005616	Corn Rhizosphere	MPDNPNTDNPPIETEAWEIAFKPYATDADAAFDLSRRLMEVKEYLKAKPPNLSMAEEALDEAAELLFPYTEFYKAAYDLYLTFIEGRPTKAQEDLMDSLGIRY*
Ga0068852_1020973802	3300005616	Corn Rhizosphere	MQDNPSTDNPPIETEAWEIAFKPYATDADAAFDLARRLMEVKRYLKAKPPNPSLAMAALDEAAELLFPFTQFHKASYDLYLTFIEGRPTKAQ
Ga0068859_1001096383	3300005617	Switchgrass Rhizosphere	MPDNPNTDNPPIETEAWEIALKPYATDADAAFDLARRLMEIKRLLQTQPPSVSLAKAALDDACELLFPFTEFRKAAYDLYLTFIEGRPTKAQEDLMDSLGIRY*
Ga0068859_1002414427	3300005617	Switchgrass Rhizosphere	TMQDNPSTDNPPIETEAWEIAFKPYATDAEAAFDLARRLMEVKEYLKTMPPNLSMAKAALDEACEILFPFTQFYKAAYDLYLAFIEGTPTKAQEDLMDSLGIRY*
Ga0068859_1004592292	3300005617	Switchgrass Rhizosphere	MPDNPSTDTPPIETEAWEIALKPYATDADAAFDLARRLMEVKRYLKAKPPNPSLAIAALDEAAELLFPYTEFYRASYDLYLTFIEGRPTKAQEDLIESLGIRY*
Ga0068866_114716232	3300005718	Miscanthus Rhizosphere	MVKNSEPDPEPFAIESEAWESALNPYSTEPHAAYDLARRLMEIKRFLKSKPPNVSMAVLALDEAAELIFPFTQFHEVAYDLYLTAIDGHPTKAQENLMESLGIRY*
Ga0068858_1018956512	3300005842	Switchgrass Rhizosphere	MVKTSVESESFPIETEAWEMALKPYETDAGAAYDMARRLMEVKQYLKTKPPNVSAAMLALDEAAELLFPFTEFYRAAYGLYLTFIEGT
Ga0068860_1000777145	3300005843	Switchgrass Rhizosphere	MPDNPNTDTPPIETEAWEIALKPYATDAEAAFDLARRLMEVKRYLEAKPPNLSLAMVALDEAAELLFPFTEFYKAAYDLYLTSSKGGPQKRKRILLKVWG*
Ga0068862_1011019252	3300005844	Switchgrass Rhizosphere	MPDNPNTATPPIETEAWEIAFKPYATDAEAAFDLAKRLMEVKQYLTARPPDRSMAIEALDEAVELLFPYTPLYEATYDLYLAFIDGTPTKEQEEIMEALGVRY*
Ga0068862_1017531271	3300005844	Switchgrass Rhizosphere	MPDNPNTDSPPIETEAWAIAFKPYATNAAAAFDLARRLMEVKQYLKAQPPNLSMAKDALDEACEILFPFTEFRKSAYDLYLTFIEGTPTKAQEDLMDSLGIRY*
Ga0068862_1018694411	3300005844	Switchgrass Rhizosphere	MVKNSEPEPEPFAIEAEAWESALAPFSTEPLAAYDLARRLMEIKRFLKSKPPNVSMAVLALDEAAEFIFPLTQFHEVAYDLYLTAIDGHPTKAQENLMESLGIRY*
Ga0081539_100119862	3300005985	Tabebuia Heterophylla Rhizosphere	MPDNPNTDNPPIETEAWEIAFKPYATDADAAFDLARRLMEVKEYLTAKPPNLSMAKEALDEACELLFPFTDFYKAAYDLYLTFIEGTPTKAQEDLMDSLGIRY*
Ga0105250_101463263	3300009092	Switchgrass Rhizosphere	MPDNPSTDTPPIETEAWEIAFKPYATDADAAFDMARRLMEIKRLLQTQPPSLSLAKAALDDACELLFPFTEFYKASYDLYLTFIEGRPTKAQEDILT
Ga0105247_105054882	3300009101	Switchgrass Rhizosphere	VLSTPASPYTAESFPVKKEESTMPDNPNTDNPPIETEAWEIAFKPYATDADAAFDLSRRLMEVKEYLKAKPPNLSMAEEALDEAAELLFPFTQFHKASYDLYLTFIEGRPTKAQEDILDALGIRY*
Ga0105243_106867431	3300009148	Miscanthus Rhizosphere	MPDNPNTDNPPIETEAWEIAFKPYATDAEAAFDLAKRLMEVKQYLTAKPPDRSMAIEALDEAVELLFPYTPLYEATYDLYLAFIDGTPTKEQEEIMEALGVRY*
Ga0105243_108839382	3300009148	Miscanthus Rhizosphere	VLSTPASPYTAESFPVKKEESTMPDNPNTDNPPIETEAWEIALKPYAKHAEAAFDLARRLMEVKRYLKAKSPNVSMAVDALDEAVEILFPFTDFHKGAYDLYLTFIDGMPTKQQEDLADSLGIRY*
Ga0105243_117608481	3300009148	Miscanthus Rhizosphere	DNPPIETEAWEIALKPYATDADAAFDMARRLMEVKRYLKAKPPNPSLAIAALDEAAELLFPYTEFYKASYDLYLTFIEGRPTKAQEDLIESLGIRY*
Ga0105241_101253205	3300009174	Corn Rhizosphere	DSTMQDNPNTDTPPIETEAWEIAFKPYATDADAAFDMARRLMEVKRYLKAKPPNPSLAIAALDEAAELLFPFTEFYRASYDLYLTFIEGRPTKAQEDLIESLGIRY*
Ga0105241_108599651	3300009174	Corn Rhizosphere	MPDNPNTATPPIETEAWEIAFKPYATDAEAAFDLAKRLMEVKQYLTAKPPDRSMAIEALDEAVELLFPYTPLYEATYDLYLAFIDGTPTKEQEEIMEALGVRY*
Ga0105241_115450251	3300009174	Corn Rhizosphere	MPDNPNTENPPIETEAWEIALKPYATDADAAFDLVRRLMEVKRYLKAKPPNPSMAIAALDEAAELIFPYTEFYRASYDLYLTFIEGRPTKGQEDLIESLGIRY*
Ga0105241_123737211	3300009174	Corn Rhizosphere	MPDNPSTDTPPIETEAWEIALKPYATDADAALNMARRLMEVKQYLNTQPPNVSLARLALDEACELLFPFTEFYKASYDLYLTFIEGRPTKAQEDLIESLGIRY*
Ga0105242_100585883	3300009176	Miscanthus Rhizosphere	MQDNPNTGTPPIETEAWEIAFKPYATDADAAFDLARRLMEVKRYLKAKPPNLSMAMAALDEAAELLFPFTEFYKAAYDLYLTFIGGRPTKAQEDLIESLGIRY*
Ga0105242_102096383	3300009176	Miscanthus Rhizosphere	MRANTTTDIEDDESPIETEQWEIALKPYATDADAAFDMARRLMEIKKLLQTKPPSVSLARAALDDACELLFPFTEFSQAAYDLYLTFIAGTPTKAQEDALTSMGVKF*
Ga0105242_124552852	3300009176	Miscanthus Rhizosphere	MPDNPSTDTPPIETEAWEIALKPYATDADAAFDLARRLMEVKRYLKAKPPNPSLAIAALDEAAELLFPFTEFYKASYDLYLTFIEGRPTKAQEDLIESLGIRY*
Ga0105248_100500898	3300009177	Switchgrass Rhizosphere	MPDNPNTDIPPIDAEAWEIAFKPYATDAMAAYDMARRLMSVKRFLKAKPPNLSMAMEALDEAAEILFPFTEFHKAAYDLYLTFIEGRPTKAQEDIMDSLGITY*
Ga0105248_110231551	3300009177	Switchgrass Rhizosphere	MQDDPTMDESDLAPIETEAWEIAFKPYATDPDAAFDLARRLMEVKRYLKTKPPNLSLAKEALDEACELLFPFTQFYEAAYNLYLTFIDGHPTRAQENLMESLGIRY*
Ga0105248_116054081	3300009177	Switchgrass Rhizosphere	MPDNPSTDTPPIETEAWEIALKPYATDADAAFDMARRLMEIKRLLQTQPPSVSLAKAALDDACELLFPFTEFRKAAYDLYLAFIEGTPTKAQEDVLTSLGVKF*
Ga0105237_100698194	3300009545	Corn Rhizosphere	MPDNPNTDNPPIETEAWQIAFKPYATDAEAAFDLSRRFMEVKEYLKAKPPNLSMAEEALDEAAELLFPYTDFYKAAYDLYLTFIEGRPTKAQEDLMDSLGIRY*
Ga0105237_102286731	3300009545	Corn Rhizosphere	YTAEILTRLRERKSTMPDNPNTENPPIETEAWEIAFKPYATDAEAAFDLARRLMEVKQYLTAKPPNLSMAEEALDEAAEVLFPFTDFYKAAYDLYLTFIEGRPTKAQEDLMDSLGIRY*
Ga0105237_102644673	3300009545	Corn Rhizosphere	MVKNSEPDPEPFAIESEAWESALKPYSTEPDAAYDLARRLMEIKRFLKSKPPNVSMAVLALDEAAELIFPFTQFHEVAYDLYLTAIDGHPTKAQENLMESLGIRY*
Ga0105237_116492901	3300009545	Corn Rhizosphere	WEIAFKPYATDTDAAYDLARRLMEVKRYLKTKPPNVTLAMEALDEACEILFPFTEFRKVAFDLYLTAIDGHPTRAEENLMESLGIKY*
Ga0105238_111119631	3300009551	Corn Rhizosphere	MPDNPNTATPPIETEAWEIAFKPYAEDAEAAFDLAKRLMEVKQYLTAKPPDRSMAIEALDEAVQLLFPYTPLYEATYDLYLAFIDGTPTKAQEEIMEALGVRY*
Ga0105249_100005039	3300009553	Switchgrass Rhizosphere	MPDNPSTDTPPIETEAWEIAFKPYATDADAAFDMARRLMEIKRLLQTQPPSLSLAKAALDDACELLFPFTEFYKASYDLYLTFIEGRPTKAQEDILTSLGIRY*
Ga0126311_1000000545	3300010045	Serpentine Soil	MQDNPITDNEDDSPIETEVWESALNPYATDADAAFDLARRLMEIKKLLQTQPPSVSLAKAALDDACELLFPFTEFRKAAYDLYLTFIEGRPTKAQEDVLTSLGIRH*
Ga0126384_100813522	3300010046	Tropical Forest Soil	MQDNPTTENPPIETEAWEIAFKPYATDAEAAFDLARRFMEVKEYLKAKPPNLSMAEEALDEAAELLFPFTPFYKAAYDLYLTFIEGTPTKAQEDLLDSLGVRY*
Ga0105239_113822192	3300010375	Corn Rhizosphere	MPDNPSTDTPPIETEAWEIAFKPYATDAEAAFDLAKRLMEVKQYLTAKPPDRSMAIEALDEAVELLFPYTPLYEATYDLYLAFIDGTPTKAQEEIMEALEVRY*
Ga0134124_104959323	3300010397	Terrestrial Soil	MQDNPNTDTPPIETEAWEIALKPYAEDADAAFDLARRLMEVKRLLQTQPPSVSLAQAALDDACELLFPFTEFRKAAYDLYLTFIEGRPTKAQEDLIESLGIRY*
Ga0134124_119436262	3300010397	Terrestrial Soil	RKESTMPDNPSTDNPPTETEAWEIAFKPYATDAEAAFDLARRLMEVKQYLKTTPPDLSMAVEALDEAAELLFPFTEFHKTAYDLYLTFIEGTPTKAQEDLMDSLGIRY*
Ga0134124_119767902	3300010397	Terrestrial Soil	MVKNSEPDPEPFAIESEAWESALKPYSTEPDAAYDLARRLMEIKRFLTTKPPNVSMAVLALDEAAEFIFPLTQFHEIAYDLYLTAIDGHPTKAQENLMESLG
Ga0134124_131914122	3300010397	Terrestrial Soil	MPDNPNTDNPPIETEAWEIAFKPYATDAEAAFDLARRLMEVKEYLKTKPPNLSMAKAALDEACEILFPFTQFYKAAYDLYLAFIEGTPTKAQEDLMDSLGIRY*
Ga0134127_127667022	3300010399	Terrestrial Soil	MPDNPNTDTPPIETEAWEIAFKPYATDASAAFDLSRRLMEVKEYLKAKPPDLSMAKDALDEACELLFPFTDFYKAAYDLYLTFIEGTPTKAQEDLMESLGIRY*
Ga0134121_119985992	3300010401	Terrestrial Soil	IETEAWEIALKPYATDADAAFDMARRLMEIKRLLQTQPPSVSLAKAALDDACELLFPFTEFRKAAYDLYLTFIEGRPTKAQEDLMDSLGIRY*
Ga0134123_123346011	3300010403	Terrestrial Soil	MQDNTTTDSEDDESPIETEQWEIALKPYATHAEAAFDLARRLMEVKRYLKAKPPNVSMATSALDEAVEILFPFTDFQKGAYDLYVTFIDGTPTKEQEDLADSLGIRY*
Ga0134123_134722391	3300010403	Terrestrial Soil	MPDNPNTDNPPIETEAWEIAFKPYATDAEAAFDLARRLMEVKQYLKTQPPNVSAAKEALAEAAELLFPFTQFYQAAFDLYLTFIEGHPTRAQEDLIESLGIRY*
Ga0157371_105892662	3300013102	Corn Rhizosphere	MPDNPNTDIPPIETGAWEIAFKPYVTDAEAAFDLARRLMEVKRLLQTQPPSVSLAQAALDDACELLFPFTEFRKAAYDLYLTFIEGRPTKAQEDVLTSLGIRY*
Ga0157372_119455051	3300013307	Corn Rhizosphere	MQDNPNTENPPIETEAWEIAFKPYATDAEAAFDLARRLMEVKQYLKTKPPSVSAAKEALDEACETLFPFTEFYKAAYNLYLTFIAGTPTKEQEDLMDSLGISY*
Ga0163163_104856901	3300014325	Switchgrass Rhizosphere	MPDNPNTDNPPIETEAWEIALKPYARHAEAAFDLARRLMEVKRYLKAKPPNVSMATSALDEAVEILFPFTDFQKSAYDLYLTFIDGTPTKEQEDLADSLGIRY*
Ga0163163_109730792	3300014325	Switchgrass Rhizosphere	MPDNPSTDTPPIETEAWEIALKPYATDAEAAFDLAKRLMEVKQYLTAKPPDRSMAIEALDEAVELLFPYTPLYEATYDLYLAFIDGTPTKAQEEIMEALGVRY*
Ga0163163_111865621	3300014325	Switchgrass Rhizosphere	MAEKSPGPSPIETEAWEIAFTPYAEDAGAAYDMARRLMEVKRYLKTKPPNVTLAMEALDEACEILFPFTEFRKVAFDLYLTAIDGHPTRAEENLMESLGIQY*
Ga0157380_106234111	3300014326	Switchgrass Rhizosphere	MQDNPNTENPPIDVEAWEIALKPYATNAEAAFDLARRLMEVKRYLEAKPPNVSMATSALDEAVEILFPFTDFQKGAYDLYLTFIDGTPTKEQEDLADSLGIRY*
Ga0157380_124527831	3300014326	Switchgrass Rhizosphere	PPIETEAWEIAFKPYATDADAALDLARRLMEVKQYLKAKPPNVSLAVLALDEACELLFPYTEFRRAAYDLYLTFIEGRPTKAQEDLIESLGIRY*
Ga0207710_100007186	3300025900	Switchgrass Rhizosphere	MPDDVTTDIEDDESPIETEVWEIALKPYAEDAEAAFDMARRLMEIKELLQAQPPNVSLARVALDDACELLFPFTEFRKAAYDLYLAFIEGTPTKAQEDVLTSLGVKF
Ga0207654_111110791	3300025911	Corn Rhizosphere	MPDNPNTENPPIETEAWEIALKPYATDADAAFDLVRRLMEVKRYLKAKPPNPSMAIAALDEAAELIFPYTEFYRASYDLYLTFIEGRPTKGQEDLIESLGIRY
Ga0207671_100991234	3300025914	Corn Rhizosphere	MPDNPNTDNPPIETEAWQIAFKPYATDAEAAFDLSRRFMEVKEYLKAKPPNLSMAEEALDEAAELLFPYTDFYKAAYDLYLTFIEGRPTKAQEDLMDSLGIRY
Ga0207671_110286003	3300025914	Corn Rhizosphere	WEIAFKPYATDTDAAYDLARRLMEVKRYLKTKPPNVTLAMEALDEACEILFPFTEFRKVAFDLYLTAIDGHPTRAEENLMESLGIKY
Ga0207671_110800251	3300025914	Corn Rhizosphere	MPDNPNTENPPIETEAWEIALKPYAKHAEASFDLARRLMEVKRYLKAKPPNVSMATSALDEAVEILFPFTDFQKGAYDLYLTFIDGTPTKEQEDLADSLGIRY
Ga0207649_115455131	3300025920	Corn Rhizosphere	MPDNPNTDTPPIETEAWEIALKPYATDADAAFDLVRRLMEVKRYLKAKPPNPSMAIAALDEAAELIFPYTEFYRASYDLYLTFIEGRPTKGQEDLI
Ga0207681_100768155	3300025923	Switchgrass Rhizosphere	MPDNPNTDTPPIETEAWEIALKPYATDADAAFDMARRLMEIKRLLQTQPPSVSLAKAALDDACELLFPFTEFRKAAYDLYLTFIEGRPTKAQEDLIESLGIRY
Ga0207650_10000005416	3300025925	Switchgrass Rhizosphere	MVKTSEPDPEPFAIESEAWETALKPYSTEAHAAYDLARRLMEIKRFLTTKPPNVSMAVLALDEAAELIFPFTQFHEVAYDLYLTAIDGHPSKAQENLMESLGIRY
Ga0207686_100618823	3300025934	Miscanthus Rhizosphere	MQDNPNTGTPPIETEAWEIAFKPYATDADAAFDLARRLMEVKRYLKAKPPNLSMAMAALDEAAELLFPFTEFYKAAYDLYLTFIGGRPTKAQEDLIESLGIRY
Ga0207686_101183622	3300025934	Miscanthus Rhizosphere	MRANTTTDIEDDESPIETEQWEIALKPYATDADAAFDMARRLMEIKKLLQTKPPSVSLARAALDDACELLFPFTEFSQAAYDLYLTFIAGTPTKAQEDALTSMGVKF
Ga0207709_101677914	3300025935	Miscanthus Rhizosphere	MPDNPNTDNPPIETEAWEIAFKPYATDADAAFDMARRLMEVKRYLKAKPPNPSLAIAALDEAAELLFPYTEFYKASYDLYLTFIEGRPTKAQEDLIESLGIRY
Ga0207670_111754771	3300025936	Switchgrass Rhizosphere	MPDNPNTDTPPIETEAWEIAFKPYAEDAEAAFDLAKRLMEVKQYLTAKPPDRSMAIEALDEAVELLFPYTPLYEATYDLYLAFIDGTPTKEQEEIMEALGVRY
Ga0207704_119615211	3300025938	Miscanthus Rhizosphere	MPDNPITDNPPIETEAWEIALKPYATNANAAFDMARRLMEVKRYLKTKPPNPSMAIAALDEAAELLFPYTEFYRASYDLYLIFIDGRPTQAQEDIL
Ga0207691_105308692	3300025940	Miscanthus Rhizosphere	MPDNPNTDNPPIETEAWEIALKPYATDADAALDLACRLMEVKQYLKAKPPNVSLAVLALDEACELLFPFTEFRQTAYNLYLTFIEGRPTKAQEDLIESLGIRY
Ga0207679_104966152	3300025945	Corn Rhizosphere	MPDNPNTDNPPIETEAWEIALKPYARHAEAAFDLARRLMEVKRYLKAKPPNVSMATSALDEAVEILFPFTDFQKSAYDLYLTFIDGTPTKEQEDLADSLGIRY
Ga0207679_108917722	3300025945	Corn Rhizosphere	MVKNSEPDPEPFAIESEAWESALKPYSTEPDAAYDLARRLMEIKRFLTTKPPNVSMAMLALDEAAELIFPFTQFHEVAYDLYLTAIDGHPTKAQENLMESLGIRY
Ga0207651_108108611	3300025960	Switchgrass Rhizosphere	MPDDVTTDIEDDESPIETEVWEIALKPYAEDAEAAFDMARRLMEIKELLQAQPPNVSLARVALDDACELLFPFTEFRQTAYDLYLTFIEGRPTKAQEDLIESL
Ga0207712_1000069517	3300025961	Switchgrass Rhizosphere	MPDNPSTDTPPIETEAWEIAFKPYATDADAAFDMARRLMEIKRLLQTQPPSLSLAKAALDDACELLFPFTEFYKASYDLYLTFIEGRPTKAQEDILTSLGIRY
Ga0207703_105425383	3300026035	Switchgrass Rhizosphere	MPDNPNTDNPPIETEAWEIAFKPYATDADAAFDLSRRLMEVKEYLKAKPPNLSMAEEALDEAAELLFPYTEFYKAAYDLYLTFIEGRPTKAQEDLMDSLGIRY
Ga0207703_111644221	3300026035	Switchgrass Rhizosphere	MQDNPNTGNPPIETEAWEIAFKPYATDAEAAFDLAKRLMEVKQYLTAKPPNWSTAIEALDEAVELLFPYTPLYEATYDLYLAFIDGTPTKAQEEIMEALGVRY
Ga0207708_102117994	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MPDNPNTDNPPIETEAWEIAFKPYATDADAAFDLAKRLMEVKQYLTAKPPNLSLAMVALDEAAELLFPFTEFYKAAYDLYLTFIEGRPTKAQEDLIESLGIRY
Ga0207676_121457992	3300026095	Switchgrass Rhizosphere	MPDNPSTDTPPIETEAWEIALKPYATDADAAFDLARRLMEIKRLLQNQPPSVSLAQAALDDACELLFPFTEFRKAAYDLYLTFIEGRPTKAQEDVLTSLGIRY
Ga0207675_1001357793	3300026118	Switchgrass Rhizosphere	MQNNPNTENPPIDVEAWEIALKPYATNAEAAFDLARRLMEVKRYLTAKPPDLSLAMEALDEACELLFPFTDFYKAAYDLYLTFIEGRPTKAQEDLMDSMGIRY
Ga0207698_100692103	3300026142	Corn Rhizosphere	MVKNSESEPAPIETEAWEIAFKPYATDTDAAYDLARRLMEVKRYLKTKPPNVTLAMEALDEACEILFPFTEFRKVAFDLYLTAIDGHPTRAEENLMESLGIKY
Ga0207698_106726372	3300026142	Corn Rhizosphere	MQDNTTTDSEDDESPIETEQWEIALKPYATDADAAFDMARRLMEIKKLLQAQPPNVSVARAALDDACELLFPFTEFSQAAYDLYLTFIAGTPTKAQEDTLTSMGVKF
Ga0268265_118220461	3300028380	Switchgrass Rhizosphere	PDNPNTDSPPIETEAWAIAFKPYATNAAAAFDLARRLMEVKQYLKAQPPNLSMAKDALDEACEILFPFTEFRKSAYDLYLTFIEGTPTKAQEDLMDSLGIRY
Ga0268265_118842341	3300028380	Switchgrass Rhizosphere	MPDNPNTATPPIETEAWEIAFKPYATDAEAAFDLAKRLMEVKQYLKAKPPDRSMAIEALDEAVELLFPYTPLYEATYDLYLAFIDGTPTKEQEEIMEALGVRY
Ga0268264_100130312	3300028381	Switchgrass Rhizosphere	MPDNPSTDTPPIETEAWEIALKPYATDADAAFDLARRLMEIKRFLTTKPPSVSMAVLALDEAAELIFPFTQFHEVAYDLYLTAIDGHPSKAQENLMESLGIRY
Ga0268264_100418305	3300028381	Switchgrass Rhizosphere	MPDNPNTDTPPIETEAWEIALKPYATDAEAAFDLARRLMEVKRYLEAKPPNLSLAMVALDEAAELLFPFTEFYKAAYDLYLTSSKGGPQKRKRILLKVWG
Ga0268264_103267381	3300028381	Switchgrass Rhizosphere	MPDNPSTDTPPIETEAWEIALKPYATDADAAFDMARRLMEIKRLLQTQPPSVSLAKAALDDACELLFPFTEFRKAAYDLYLTFIEGRPTKAQEDVLTSLGIRY
Ga0307472_1023020821	3300032205	Hardwood Forest Soil	MVKTSVESQPFPIETEAWEIALKPYETDAGAACDMARRLMEVKQYLKTKPPNTSMAMESLDEAAELLFPFTEFYKAAYDLYLTFIEGRPTKAQEDLMDSLGIRY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086524

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences