Metagenome / Metatranscriptome Family F086616

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086616
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	98 residues
Representative Sequence	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPIVKLAGEEDEHVYSLIGKVHAALSEVGLRRRAQRFVMRAYYLGSYDEVLRLARRFVEFE
Number of Associated Samples	64
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.27 %
% of genes near scaffold ends (potentially truncated)	32.73 %
% of genes from short scaffolds (< 2000 bps)	86.36 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.545 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (30.000 % of family members)
Environment Ontology (ENVO)	Unclassified (31.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.62% β-sheet: 10.89% Coil/Unstructured: 51.49%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF13193	AMP-binding_C	33.64
PF07690	MFS_1	10.91
PF01027	Bax1-I	5.45
PF02634	FdhD-NarQ	2.73
PF01184	Gpr1_Fun34_YaaH	0.91
PF16177	ACAS_N	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1526	Formate dehydrogenase assembly factor FdhD, a sulfurtransferase	Energy production and conversion [C]	2.73
COG1584	Succinate-acetate transporter SatP	Energy production and conversion [C]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
All Organisms	root	All Organisms	45.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
cellular organisms	root	All Organisms → cellular organisms	45.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	26.36 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.45 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	25.45 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	25.45 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	25.45 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	23.64 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	1.82 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	23.64 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	1.82 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2119805009\|FNTS007_GKN1E7E02HW0GF	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	513	Open in IMG/M
2209111000\|2209482155	Not Available	550	Open in IMG/M
2209111000\|2209984614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	727	Open in IMG/M
3300000095\|LCrCPGB2aDRAFT_c000463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	5578	Open in IMG/M
3300000095\|LCrCPGB2aDRAFT_c031773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	963	Open in IMG/M
3300004153\|Ga0063455_101704647	Not Available	500	Open in IMG/M
3300005562\|Ga0058697_10043513	Not Available	1696	Open in IMG/M
3300005562\|Ga0058697_10115509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1132	Open in IMG/M
3300005562\|Ga0058697_10249489	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300005562\|Ga0058697_10457538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	644	Open in IMG/M
3300005985\|Ga0081539_10084086	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300007790\|Ga0105679_10236108	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1576	Open in IMG/M
3300007790\|Ga0105679_10912958	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300009789\|Ga0126307_10025404	All Organisms → cellular organisms → Bacteria	4518	Open in IMG/M
3300009789\|Ga0126307_10909315	Not Available	711	Open in IMG/M
3300009789\|Ga0126307_11262034	Not Available	598	Open in IMG/M
3300009840\|Ga0126313_10366859	Not Available	1137	Open in IMG/M
3300009840\|Ga0126313_10990961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	688	Open in IMG/M
3300009840\|Ga0126313_11231222	Not Available	617	Open in IMG/M
3300009840\|Ga0126313_11252108	Not Available	612	Open in IMG/M
3300009840\|Ga0126313_11394294	Not Available	581	Open in IMG/M
3300010036\|Ga0126305_10504062	Not Available	807	Open in IMG/M
3300010036\|Ga0126305_10788919	Not Available	645	Open in IMG/M
3300010036\|Ga0126305_10932811	Not Available	593	Open in IMG/M
3300010037\|Ga0126304_10185038	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300010037\|Ga0126304_10975606	Not Available	577	Open in IMG/M
3300010038\|Ga0126315_10285140	Not Available	1016	Open in IMG/M
3300010038\|Ga0126315_10918370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	582	Open in IMG/M
3300010039\|Ga0126309_10020414	All Organisms → cellular organisms → Bacteria	2885	Open in IMG/M
3300010039\|Ga0126309_10040283	All Organisms → cellular organisms → Bacteria	2184	Open in IMG/M
3300010039\|Ga0126309_10065849	All Organisms → cellular organisms → Bacteria	1778	Open in IMG/M
3300010039\|Ga0126309_10529360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	730	Open in IMG/M
3300010039\|Ga0126309_10890422	Not Available	589	Open in IMG/M
3300010040\|Ga0126308_10339356	Not Available	994	Open in IMG/M
3300010040\|Ga0126308_10737727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	679	Open in IMG/M
3300010040\|Ga0126308_11215654	Not Available	534	Open in IMG/M
3300010041\|Ga0126312_10201503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1391	Open in IMG/M
3300010042\|Ga0126314_10405690	Not Available	982	Open in IMG/M
3300010042\|Ga0126314_10512225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	871	Open in IMG/M
3300010044\|Ga0126310_10019023	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3398	Open in IMG/M
3300010044\|Ga0126310_10510417	Not Available	880	Open in IMG/M
3300010044\|Ga0126310_10947250	Not Available	674	Open in IMG/M
3300010045\|Ga0126311_11187989	Not Available	630	Open in IMG/M
3300010166\|Ga0126306_10049249	Not Available	2912	Open in IMG/M
3300010166\|Ga0126306_10320525	Not Available	1197	Open in IMG/M
3300010166\|Ga0126306_10414335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1055	Open in IMG/M
3300012045\|Ga0136623_10013121	All Organisms → cellular organisms → Bacteria	3447	Open in IMG/M
3300012093\|Ga0136632_10393478	Not Available	621	Open in IMG/M
3300012183\|Ga0136624_1010513	All Organisms → cellular organisms → Bacteria	3923	Open in IMG/M
3300012184\|Ga0136610_1005679	All Organisms → cellular organisms → Bacteria	4533	Open in IMG/M
3300012678\|Ga0136615_10065150	All Organisms → cellular organisms → Bacteria	1814	Open in IMG/M
3300012678\|Ga0136615_10215573	Not Available	873	Open in IMG/M
3300012679\|Ga0136616_10249593	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300012681\|Ga0136613_10049062	All Organisms → cellular organisms → Bacteria	2424	Open in IMG/M
3300012681\|Ga0136613_10201538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1123	Open in IMG/M
3300012681\|Ga0136613_10630388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	575	Open in IMG/M
3300012684\|Ga0136614_10430455	Not Available	960	Open in IMG/M
3300014487\|Ga0182000_10011637	Not Available	2158	Open in IMG/M
3300014487\|Ga0182000_10026911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1572	Open in IMG/M
3300014487\|Ga0182000_10123597	Not Available	901	Open in IMG/M
3300014487\|Ga0182000_10575924	Not Available	539	Open in IMG/M
3300014488\|Ga0182001_10007496	Not Available	2275	Open in IMG/M
3300014488\|Ga0182001_10024764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1438	Open in IMG/M
3300014488\|Ga0182001_10064058	Not Available	1036	Open in IMG/M
3300014488\|Ga0182001_10074644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	985	Open in IMG/M
3300014488\|Ga0182001_10566507	Not Available	538	Open in IMG/M
3300014488\|Ga0182001_10654733	Not Available	515	Open in IMG/M
3300018422\|Ga0190265_10757028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1094	Open in IMG/M
3300018432\|Ga0190275_10187915	Not Available	1942	Open in IMG/M
3300018432\|Ga0190275_11034059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	893	Open in IMG/M
3300018465\|Ga0190269_10311076	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300018465\|Ga0190269_11146670	Not Available	605	Open in IMG/M
3300018465\|Ga0190269_11897597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	513	Open in IMG/M
3300018466\|Ga0190268_10057321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1586	Open in IMG/M
3300018466\|Ga0190268_10178942	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300018466\|Ga0190268_10953734	Not Available	676	Open in IMG/M
3300018468\|Ga0066662_11943444	Not Available	616	Open in IMG/M
3300018875\|Ga0193608_1038905	Not Available	1057	Open in IMG/M
3300018891\|Ga0193610_1063536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	992	Open in IMG/M
3300018910\|Ga0193598_1100366	Not Available	667	Open in IMG/M
3300018917\|Ga0193611_1160336	Not Available	550	Open in IMG/M
3300018920\|Ga0190273_10126750	Not Available	1482	Open in IMG/M
3300018939\|Ga0193593_1172549	Not Available	514	Open in IMG/M
3300018946\|Ga0193599_1226528	Not Available	575	Open in IMG/M
3300018984\|Ga0193605_1082524	Not Available	982	Open in IMG/M
3300019132\|Ga0193604_1026547	Not Available	886	Open in IMG/M
3300019377\|Ga0190264_11215102	Not Available	627	Open in IMG/M
3300019377\|Ga0190264_12116652	Not Available	521	Open in IMG/M
3300019767\|Ga0190267_10063004	Not Available	1328	Open in IMG/M
3300020181\|Ga0196958_10347937	Not Available	556	Open in IMG/M
3300024430\|Ga0196962_10046434	Not Available	1310	Open in IMG/M
3300025167\|Ga0209642_10306160	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300027750\|Ga0209461_10171745	Not Available	539	Open in IMG/M
3300027766\|Ga0209796_10056320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1186	Open in IMG/M
3300028578\|Ga0272482_10089922	Not Available	858	Open in IMG/M
3300030496\|Ga0268240_10028937	Not Available	1100	Open in IMG/M
3300030496\|Ga0268240_10077034	Not Available	753	Open in IMG/M
3300030510\|Ga0268243_1001217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	4092	Open in IMG/M
3300030513\|Ga0268242_1003124	All Organisms → cellular organisms → Bacteria	2436	Open in IMG/M
3300030513\|Ga0268242_1022797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1067	Open in IMG/M
3300031092\|Ga0308204_10009022	Not Available	1751	Open in IMG/M
3300032159\|Ga0268251_10128074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	935	Open in IMG/M
3300033989\|Ga0334924_037723	Not Available	618	Open in IMG/M
3300034007\|Ga0334936_008381	Not Available	2400	Open in IMG/M
3300034009\|Ga0334944_042110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	872	Open in IMG/M
3300034026\|Ga0334946_085432	Not Available	531	Open in IMG/M
3300034132\|Ga0334915_020071	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300034133\|Ga0334916_019113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	818	Open in IMG/M
3300034136\|Ga0334933_054786	Not Available	608	Open in IMG/M
3300034781\|Ga0334935_182564	Not Available	583	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.73%
Host-Associated	Host-Associated	7.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.73%
Aquatic	Environmental → Aquatic	10.00%
Plants	Host-Associated → Plants	7.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.73%
Freshwater	Environmental → Aquatic → Freshwater	10.00%
Phylloplane	Host-Associated → Plants → Phylloplane	5.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.91%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.91%
Sand	Environmental → Terrestrial → Soil → Sand	15.45%
Ice	Environmental → Aquatic → Freshwater → Ice	10.00%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	5.45%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	4.55%
Loam	Environmental → Terrestrial → Soil → Loam	1.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.91%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	56.36%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	15.45%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	10.00%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	5.45%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	4.55%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	2.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	30.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.73%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	11.82%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	10.00%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	5.45%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	3.64%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	2.73%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	2.73%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	1.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.91%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.91%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2119805009	Soil microbial communities from sample at FACE Site NTS_007 Nevada Test Site	Environmental	Open in IMG/M
2209111000	Soil microbial communities from Colorado Plateau, Greene Butte sample - Dark Crust, Colorado Plateau, Green Butte	Environmental	Open in IMG/M
3300000095	Soil microbial communities from Colorado Plateau, Green Butte sample - Light Crust, Colorado Plateau, Green Butte 2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012183	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ469 (22.06)	Environmental	Open in IMG/M
3300012184	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ134 (22.06)	Environmental	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012679	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018875	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018891	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018910	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018917	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300018939	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018946	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018984	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300019132	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027766	Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030513	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300033989	Biocrust microbial communities from Mojave Desert, California, United States - 20HNC	Environmental	Open in IMG/M
3300034007	Biocrust microbial communities from Mojave Desert, California, United States - 32SMC	Environmental	Open in IMG/M
3300034009	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 40SMS	Environmental	Open in IMG/M
3300034026	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMS	Environmental	Open in IMG/M
3300034132	Biocrust microbial communities from Mojave Desert, California, United States - 11HMC	Environmental	Open in IMG/M
3300034133	Biocrust microbial communities from Mojave Desert, California, United States - 12HMC	Environmental	Open in IMG/M
3300034136	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 29HNS	Environmental	Open in IMG/M
3300034781	Biocrust microbial communities from Mojave Desert, California, United States - 31SMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FNTS007_09396340	2119805009	Soil	GRENEEIWLKGVRPIVKLAGEQGESMHSLMGRIHAALSEVGLRRRAQKFVMRAYYLGSYDDVRRLAEDYVEFE
2209601895	2209111000	Soil	VSQEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEEGESTYSLMGRIHAALSEVGLRRRAQKFVMRAYYLGSYDDVLRLAKDYVEFE
2210157256	2209111000	Soil	MSKEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEQGESMHSLMGRIHAALSEVGLRRRAQKFVMRAYYLGSYDDVRRLAEDYVEFE
LCrCPGB2aDRAFT_0004636	3300000095	Soil	MYSVPTEKEACVSQEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEEGESTYSLMGRIHAALSEVGLRRRAQKFVMRAYYLGSYDDVLRLAKDYVEFE*
LCrCPGB2aDRAFT_0317732	3300000095	Soil	MSKEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEQGESMHSLMGRIHAALSEVGLRRRAQKFVMRAYYLGSYDDVRRLAEDYVEFE*
Ga0063455_1017046471	3300004153	Soil	VNEEPRIPRRYVTIRGKRVTAEVWNSIPGRENEEIWLKAIRPVVKPAGKENETAYSLIGKVHAALSEVGLRRRAQRFVMQAYYLGSYDEVLRLAKEEFVEFE*
Ga0058697_100435131	3300005562	Agave	VNEEPRIPRRYVTIHGRGGKKRRLSAEVWDSIPGRENEEIWLKAVRPVVKLAEDEDKNTYGLIGKVHAALSEVGLRRRAQRFVTRAYYLGSYEEVLRLAKEEFVEFE*
Ga0058697_101155091	3300005562	Agave	DVRVSEEGPRIPRRYVTIRGRGGRKRRLTAEVWDSIPGRENEEIWLKAVRPIVKLDEETDKNAYNLLGKVHAALSEVGLRRRAQRFVTRAYYLGSYEEVLRLAEEEFVDFE*
Ga0058697_102494891	3300005562	Agave	MSEEPHVPRRYVTIRGKRATAEVWSSIPDRENEEVWLKGVRPVVKLSERENEHMYNLIGKVHAALSEVGLRRRAQRFVMGAYYLGSY
Ga0058697_104575382	3300005562	Agave	RYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGKEGESTYGLMGRVHAALSEVGLRRRAQRFVMRAYYLGSYDDVLHLAEDYVEFE*
Ga0081539_100840862	3300005985	Tabebuia Heterophylla Rhizosphere	MTEEPRIPRRYVTIRGKLATAEVWNSIPGREDEEIWLKAVRPVVSPAGEENENVYTLIGKVHAVLSEVGLRRRAQSFVTRAYYLGSYAEVLHLAKEFVEIE*
Ga0105679_102361082	3300007790	Soil	MCEQTYPAPERSDNAVYSVPTEKEACMPEDPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGKEGESTHSLMGRIHAALSEVGLRRRAQRFVMRAYYLGSYDDVLRLAKDYVEFE*
Ga0105679_109129581	3300007790	Soil	MPEEPHIPRRYVTIRGKRVTAEVWNSIPGRENEEIWLKGVRPILKLAGKEGETAYSLMGRVHAALSEVGLRRRAQNFVMRAYYLGSYDDV
Ga0126307_100254044	3300009789	Serpentine Soil	VNEEPRIPRRYVTIHGRGGKKRRLSAEVWDSIPGRENEEIWLKAVRPVVKLAEEEDKNTYGLIGNVHAALSEVGLRCRAQRFVTRAYYLGSYEEVLRLAKEEYVEFE*
Ga0126307_109093152	3300009789	Serpentine Soil	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLSETENEHMYNLIGKVHAALSEVGLRRRAQRFVMGAYYLGSYEEVLRLAREFVEF
Ga0126307_112620341	3300009789	Serpentine Soil	MYPARPERGRRVNEEPRIPRRYVTIHGRGGKKQRLTAEVWDSIPGREDKEVWLKAVRPVVKLAKEEDKNTYALIGKVHAALSEVGLRRRAQRFVMQAYYLGSYEEVRRLAAEEFVEFE*
Ga0126313_103668591	3300009840	Serpentine Soil	VNEEPRIPRRYVTIHGRGGKKRRLSAEVWDSIPGRENEEIWLKAVRPVVKLAEEEDKNTYGLIGNVHAALSEVGLRRRAQRFVTRAYYLGSYEEVLRLAKEEFVEFE*
Ga0126313_109909611	3300009840	Serpentine Soil	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRETEEVWLKGVRPVVKLSGRESEHMYSLIGKVHAALSEVGLRRRAQRFVMRAYYLGSYEEVLRLAREFVEFE*
Ga0126313_112312221	3300009840	Serpentine Soil	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLSGRENEHMYSLIGKVHAALSEVGLRRRAQRFVMRAYYL
Ga0126313_112521081	3300009840	Serpentine Soil	KRATAEVWSSIPGRENEEVWLKGVRPVVKLAEEEDEHVYSLIGTVHAALSEVGLRRRAQRFVMRAYYLGSYDDVLRLARRFVEFE*
Ga0126313_113942942	3300009840	Serpentine Soil	MSEESHIPRRYVTIRGKRATAEVWSSIPGRETEEVWLKGVRPVVKLSGRESEHMYNLIGKVHAALSEVGLRRRAQRFVMGAYYLGSYEEVLRLAREFVEFE*
Ga0126305_105040621	3300010036	Serpentine Soil	VNEEPRLPRRYVTIHGRGGKKRRLTAEVWDSIPGRENEEIWLKAVRPVVKLAEEEDKNTYSLIGNVHAALSEVGLRRRAQRFVMQAYYLGSYEEVLRLAEEEFVEFE*
Ga0126305_107889191	3300010036	Serpentine Soil	MSEEPRIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLPEVEDDHVYSLIGKVHAALSEVGLRRRAQRFVMRAYYLGSYDEVLRLARRFVEFE*
Ga0126305_109328111	3300010036	Serpentine Soil	EEEVSVPEEPHIPRRYVTIRGKRATAEVWNSIPGREDEEIWLKAIRPVVKLTEKEDENVYSLMGKVHAALSEVGLRRRAQRFVMGAYYLGSYDEVLRLAKEFVELE*
Ga0126304_101850382	3300010037	Serpentine Soil	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRETEEVWLKGVRPVVKLSGRESEHMYNLIGKVHAALSEVGLRRRAQRFVMGAYYLGSYEEVLRLAGEFVEFE*
Ga0126304_109756062	3300010037	Serpentine Soil	MSEKPHILRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLPGVEDEHVYSLIGKVHAALSEVGLRRRAQRFVMRAYYLGSYDEVLRLARRFVEFE*
Ga0126315_102851401	3300010038	Serpentine Soil	VNEEPRIPRRYVTIHGRGGKKRRLSAEVWDSIPGRENEEIWLKAVRPVVKLAEEEDKNTYGLIGKVHAALSEVGLRRRAQRFVTRAYYLGSYEEVLRLAKEEFVEFE*
Ga0126315_109183701	3300010038	Serpentine Soil	GRENEEIWLKAVRPVVKLAEEEAKNTYSLIGKVHAALSEVGLRRRAQRFVMQAYYLGSYEEVLRLAEEEFVEFE*
Ga0126309_100204144	3300010039	Serpentine Soil	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLSGRESENMYNLIGKVHAALSEVGLRRRAQRFVMGAYYLGSYEEVLRLAREFVEFE*
Ga0126309_100402832	3300010039	Serpentine Soil	MSEEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIMKLAGKEGESAYSLMGRVHAALSEVGLRRRAQRFVMRAYYLGSYDDVLRLAKDYVEFERGPGK*
Ga0126309_100658492	3300010039	Serpentine Soil	VTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGKEGESAYSLMGRVHAALSEVGLRHRAQRFVMRAYYLGSYDDVLRLAKDYVEFE*
Ga0126309_105293601	3300010039	Serpentine Soil	PHIPRRYVTIRGKRATAEVWSSIPGRETEEVWLKGVRPVVKLSGRGNEHMYNLIGKVHAALSEVGLRRRAQRFVMGAYYLGSYEEVLRLAREFVEFE*
Ga0126309_108904222	3300010039	Serpentine Soil	MSEKPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLAEEEDEHVYSLIGTVHAALSEVGLRRRAQRFVMRAYYLGSY
Ga0126308_103393562	3300010040	Serpentine Soil	MSEKPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLAEEEDEHVYSLIGTVHAALSEVGLRRRAQRFVMRAYYLGSYDDVLRLARRFVEFE*
Ga0126308_107377271	3300010040	Serpentine Soil	YLLATKEARMSEEPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLSERENEHMYNLIGEVHAALSEVGLRRRAQRFVMGAYYLGSYEEILRLAGEFVEFE*
Ga0126308_112156541	3300010040	Serpentine Soil	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRETEEVWLKGVRPVVKLSGRESEHMYNLIGKVHAALSEVGLRRRAQRFVMGAYYLGSYEEVLRLAREFV
Ga0126312_102015031	3300010041	Serpentine Soil	VWDSIPGRENEEIWLKAVRPVVKLAEEEDKNTYGLIGKVHAALSEVGLRRRAQRFVMQAYYLGSYEEVLRLAKEEYVEFE*
Ga0126314_104056901	3300010042	Serpentine Soil	VWDSIPGRENEEIWLKAVRPVVKLAEEEDKNTYGLIGNVHAALSEVGLRRRAQRFVTRAYYLGSYEEVLRLAKEEYVEFE*
Ga0126314_105122252	3300010042	Serpentine Soil	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLSGRENEHMYNLIGKVHAAFSEVGLRRRAQRFVMGAYYLGSYEEVLRLAREFVEFD*
Ga0126310_100190234	3300010044	Serpentine Soil	VWDSIPGRENEEIWLKAVRPVVKLAEEEDKNTYGLIGKVHAALSEVGLRRRAQRFVTRAYYLGSYEEVLRLAKEEFVEFE*
Ga0126310_105104171	3300010044	Serpentine Soil	VHVNEEPRIPRRYVTISGRGGKKRRLTAEVWDSIPGRENEEIWLKAIRPVVKLAEEEDKHTYALIGKVHAALSEVGLRRRAQRFIMRAYYLGSYEEVLR
Ga0126310_109472501	3300010044	Serpentine Soil	VPEEPHIPRRYVTIRGKRATAEVWNSIPGRENKEIWLKAIRPIVTLTEEEDKNVYSLMGKVHAALSEVGLRRRAQRFVTRAYYLGSYEEVLRLAEEEFVEFERG
Ga0126311_111879892	3300010045	Serpentine Soil	VWDSIPGRENEEIWLKAVRPVVKLAEEEDKNTYGLIGNVHAALSEVGLRRRAQRFVTRAYYLGSYEEVLRLAKEEYVEFE
Ga0126306_100492493	3300010166	Serpentine Soil	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPIVKLAGEEDEHVYSLIGKVHAALSEVGLRRRAQTFVMRAYYLGSYDEVLRLARRFVEFE*
Ga0126306_103205251	3300010166	Serpentine Soil	VNEEPRLPRRYVTIHGRGGKKRRLTAEVWDSIPGRENEEIWLKAVRPVVKLAEEEDENTYGLIGNVHAALSEVGLRCRAQRFVTRAYYLGSYEEVLRLAKEEFVEFE*
Ga0126306_104143352	3300010166	Serpentine Soil	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLSETENEHMYNLIGKVHAALSEVGLRRRAQRFVMGAYYLGSYEEVLRLAGEFVEFE*
Ga0136623_100131212	3300012045	Polar Desert Sand	VTIRGKRATAEVWNSIPGRENEEIWLKGVRPIMKLAGEEDESAYSLMGRVHAALSEVGLRHRAQRFVMRAYYLGSYDDVLRLAEDFVEFE*
Ga0136632_103934781	3300012093	Polar Desert Sand	MSEEPRVPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEESESAHSLMGRIHAALSEVGLRRRAQKFVMRAYYLG
Ga0136624_10105132	3300012183	Polar Desert Sand	MSEEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKSMRPIVKLAGEESESAYSLMGRVHAALSEVGLRRRAQKFVMRAYYLGSYDDVLRLAEDYVEFE*
Ga0136610_10056793	3300012184	Polar Desert Sand	VPEEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIMTLAGKESESAYSLMGRVHAALSEVGLRRRAQRFVMRAYYLGSYDDVLRLTEDYVEFE*
Ga0136615_100651502	3300012678	Polar Desert Sand	VPTEKEVCVSEEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEEGESAYSLMGRVHAALSEVGLRRRAQRFVMRAYYLGSYDDVLRLAEDYVEFE*
Ga0136615_102155732	3300012678	Polar Desert Sand	VPVPEEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIMTLAGKESESAYSLMGRVHAALSEVGLRRRAQRFVMRAYYLGSYDDVLRLTEDYVEFE*
Ga0136616_102495931	3300012679	Polar Desert Sand	VPTEKEVCVSEEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEEGESAYSLMGRVHAALSEVGLRRRAQRFVMRAYYL
Ga0136613_100490621	3300012681	Polar Desert Sand	VTIRGKRATAEVWNSIPGRENEEIWLKGVRPIMTLAGKESESAYSLMGRVHAALSEVGLRRRAQRFVMRAYYLGSYDDVLRLTEDYVEFE*
Ga0136613_102015381	3300012681	Polar Desert Sand	RYSRPQRYPAEVWNSIPGRENEEIWLKSMRPIVKLAGEESESAYSLMGRVHAALSEVGLRRRAQKFVMRAYYLGSYDDVLRLAEDYVEFE*
Ga0136613_106303881	3300012681	Polar Desert Sand	GKRATAEVWNSIPGRENEEIWLKGVRPIMKLAGEEDESAYSLMGRVHAALSEVGLRHRAQRFVMRAYYLGSYDDVLRLAEDFVEFE*
Ga0136614_104304552	3300012684	Polar Desert Sand	MPEEPRIPRRYVTIRGKRATAEVWDSIPGRENEEIWLKAVRPVVKLAGEEDKNAYSLMGKVHAALSEVGLRRRAQRFVTRAYYLGSYDDMLRLAEDFVEFE*
Ga0182000_100116372	3300014487	Soil	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLSGRENEHMYSLIGKVHAALSEVGLRRRAQRFVMGAYYLGSYEEILRLAGEFVEFE*
Ga0182000_100269111	3300014487	Soil	MSEDPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGKEGESTYGLMGRVHAALSEVGLRRRAQRFVMRAYYLGSYDDVLRLAKDYVEFE*
Ga0182000_101235972	3300014487	Soil	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRETEEVWLQGVRPLVKLAGEEDEHVYSLIGKVHAALSEVGLRRRAQRFVMRAYYLGSYDEVLRLAGEFVEFERGRSPDI*
Ga0182000_105759241	3300014487	Soil	VFVPKEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKAIRPVVTLAGEEDKNVYSLMGKVHAALSEVGLRRRAQRFVMRAYYLGGYDEVLRLAREYIEIE*
Ga0182001_100074962	3300014488	Soil	MSEKPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVKPVVKLAEEEDEHVYSLIGTVHAALSEVGLRRRAQRFVMRAYYLGSYDEVLRLARRFVEFE*
Ga0182001_100247642	3300014488	Soil	VNEEPRIPRRYVTIHGRGGKKRRLSAEVWDSIPGRENEEIWLKAVRPVVKLAEDEDKNTYGLIGNVHAALSEVGLRRRAQRFVTRAYYLGSYEEVLRLAKEEFVEFE*
Ga0182001_100640582	3300014488	Soil	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPIVKLAGEEDEHVYSLIGKVHAALSEVGLRRRAQRFVMRAYYLGSYDEVLRLAGEFVEFERGRSPDS*
Ga0182001_100746441	3300014488	Soil	EPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLSGRENEHMYNLIGKVHAALSEVGLRRRAQRFVMGAYYLGSYEEILRLAGEFVEFE*
Ga0182001_105665071	3300014488	Soil	MSEEPHVPRRYVTIRGKRATAEVWSSIPDRENEEVWLKGVRPVVKLSERENEHMYNLIGKVHAALSEVGLRRRAQRFVMGAYYLGSYEEILRLATEFVEFE*
Ga0182001_106547331	3300014488	Soil	MSEDPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGKEGESTYGLMGRVHAALSDVGLRRRAQRFVMRAYYLGSYDDVLHLAEDYVEFE*
Ga0190265_107570282	3300018422	Soil	MPEEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLSGEESESAYSLMGRVHAALSEVGLRRRAQKFVMRAYYLGSYDDVLRFAKDYVEFE
Ga0190275_101879152	3300018432	Soil	MSEEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPILRLAGKEGESTHSLMGRVHAALSEVGLRRRAQKFVMRAYYLGSYDDVLRLAKDY
Ga0190275_110340591	3300018432	Soil	SIPGRENEEIWLKGVRPVMKLAGEEGESAHSLMGRVHAALSEVGLRRRAQRFIMRAYYLGSYDDVLRLAKDYVEFE
Ga0190269_103110761	3300018465	Soil	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLSGRENEHMYSLIGKVHAALSEVGLRRRAQRFVMGAYYL
Ga0190269_111466701	3300018465	Soil	MPEEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEEGESAYSLMGRIHAALSEVGLRRRAQKFVMRAYYLGSYDDVLRLAKDYVEFE
Ga0190269_118975972	3300018465	Soil	PGRENEEIWLKGVRPIMKLAGEEGESAYSLMGRIHAALSEVGLRRRAQKFVMRAYYLGSYDDVLRFAKDYVEFE
Ga0190268_100573212	3300018466	Soil	MPEEPHIPRRYVTICGKRATAEVWNSIPGRENEEIWLKGVRPIVKLSGEESESTYSLMGRVHAALSEVGLRRRAQKFVMRAYYLGSYDDVLSFAKDYVEFE
Ga0190268_101789422	3300018466	Soil	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLSETENEHMYNLIGKVHAALSEVGLRRRAQRFVMGAYYLGSYEEVLRLAGEF
Ga0190268_109537341	3300018466	Soil	RATAEVWSSIPGRENEEVWLKGVRPVVKLAGEEDEHIYSLIGKVHAALSEVGLRRRAQRFVMRAYYLGSYDEVLRLAGEFVEFERGRSPDS
Ga0066662_119434441	3300018468	Grasslands Soil	VPEESRIPRRYVTIRGKRATAEVWDSIPGRENEEIWLKAVRPVVKPAGKENETVYSLIGKVHAALSEIGLRRRAQRFVTQAYYLGSYDEVLRLAKEEFV
Ga0193608_10389051	3300018875	Soil	MPEEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPILKLAGKEGESAYSLMGRVHAALSEVGLRRRAQNFVVRAYYLGSYDDVLRLAKDYVEFE
Ga0193610_10635363	3300018891	Soil	VWNSIPGRENEEIWLKGVRPILKLSGKEGESAYSLMGRVHAALSEVGLRRRAQNFVVRAYYLGSYDDVLRLAKDYVEFE
Ga0193598_11003661	3300018910	Soil	MSKEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEQGESMHSLMGRIHAALSEVGLRRRAQKFVMRAYYLGSYDDVLRLAKDYVEFE
Ga0193611_11603361	3300018917	Soil	MPEEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEQGESMHSLMGRIHAALSEVGLRRRAQKFVMRAYYLGSYDDVRRLAEDYVEFE
Ga0190273_101267502	3300018920	Soil	MPEEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLSGEESESTYSLMGRVHAALSEVGLRRRAQKFVMRAYYLGSYDDVLRFAKDYVEFE
Ga0193593_11725491	3300018939	Soil	MPEEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPILKLAGKEGESAYSLMGRVHAALSEVGLRRRAQNFVVRA
Ga0193599_12265281	3300018946	Soil	VSQEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEEGESTYSLMGRIHAALSEVGLRRRAQKFVMRAYYLGSYDDVRR
Ga0193605_10825242	3300018984	Soil	MSKEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEEGESTYSLMGRIHAALSEVGLRRRAQRFIMRAYYLGSYDDVLRLAKDYVEFE
Ga0193604_10265472	3300019132	Soil	MSEKPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLAEEEDEHVYSLIGTVHAALSEVGLRRRAQRFVMRAYYLGSYDEVLRLARRFVEFE
Ga0190264_112151022	3300019377	Soil	MPEEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGKEGESAYSLMGRVHAALSEVGLRRRAQKFVMRAYYLGSYDDVLRFAKDYVEFE
Ga0190264_121166521	3300019377	Soil	MSETPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLAEEEDEHVYSLIGTVHAALSEVGLRRRAQRFVMRAYYLGSYDEVLRLARRFVEFE
Ga0190267_100630042	3300019767	Soil	VPEEPHIPRRYVTIRGKRATAEVWNSIPGREDEEIWLKAIRPVVKLTEREDENVYSLMGKVHAALSEVGLRRRAQRFVMGAYYLGSYDEVLRLAKEFVELE
Ga0196958_103479371	3300020181	Soil	VSEESHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEEGESTYSLMGRIHAALSEVGLRRRAQKFVMRAYYLGSYDDVLRLAKDYVEFE
Ga0196962_100464343	3300024430	Soil	VNEEPRIPRRYVTIHGRGGKKRRLTAEVWDSIPGRENKEVWLKAVRPVVRLIEGEDKNTYGLIGKVHAALSEVGLRRRAQRFVTRAYYLGSYEEVLRLAEEEFVEFE
Ga0209642_103061602	3300025167	Soil	MSEKPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPIVKLAGEEDEHVYSLIGKVHAALSEVGLRRRAQRFVMRAYYLGSYDEVLRLAGEFVEFERGRSPDS
Ga0209461_101717451	3300027750	Agave	VNEEPRIPRRYVTIHGRGGKKRRLSAEVWDSIPGRENEEIWLKAVRPVVKLAEDEDKNTYGLIGKVHAALSEVGLRRRAQRFVTRAYYLGSYEE
Ga0209796_100563201	3300027766	Agave	GRRATAEVWNSIPGRENEEIWLKAVRPIVKLADEEDKNAYSLIGRVHAALSEVGLRHRAQRFVTRAYYLGSYDEVLHLAKEFVEFE
Ga0272482_100899222	3300028578	Soil	MSEEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEEGESAHSLMGRVHAALSEVGLRRRAQKFVMRAYYLGSYDDVLGLARDYVEFE
Ga0268240_100289372	3300030496	Soil	VWNSIPGREDEEIWLKAIRPVVKLTEREDENVYSLMGKVHAALSEVGLRRRAQRFVMGAYYLGSYDEVLRLAREFVELE
Ga0268240_100770341	3300030496	Soil	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLSGRENEHMYNLIGKVHAALSEVGLRRRAQRFVMGAYYLGSYEEVLRLATEFVEFE
Ga0268243_10012172	3300030510	Soil	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLSGRENEHMYSLIGKVHAALSEVGLRRRAQRFVMGAYYLGSYEEVLRLAREFVEFE
Ga0268242_10031242	3300030513	Soil	MSEDPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPVVKLSGRENEHMYSLIGKVHAALSEVGLRRRAQRFVMGAYYLGSYEEILRLAGEFVEFE
Ga0268242_10227972	3300030513	Soil	VNEEPRIPRRYVTIHGRGGKKRRLSAEVWDSIPGRENEEIWLKAVRPVVKLAEDEDKNTYGLIGNVHAALSEVGLRRRAQRFVTRAYYLGSYEEVLRLAKEEFVEFE
Ga0308204_100090222	3300031092	Soil	VPEEPRIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKFAGKEGESAYSLMGRVHAALSEVGLRRRAQRFVMRAYYLGSYDDVLRLAKDFVEFE
Ga0268251_101280742	3300032159	Agave	DVRVSEEGPRIPRRYVTIRGRGGRKRRLTAEVWDSIPGRENEEIWLKAVRPIVKLDEETDKNAYNLLGKVHAALSEVGLRRRAQRFVTRAYYLGSYEEVLRLAEEEFVDFE
Ga0334924_037723_274_579	3300033989	Hypolithic Biocrust	MSQEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEEGESAHNLMGRIHAALSEVGLRRRAQKFVMRAYYLGSYDDVLRLAEDYVEFE
Ga0334936_008381_1558_1863	3300034007	Biocrust	MSEEPHIPRRYVTIRGKRATAEVWNSIPGRENKEIWLKGVRPILKLAGKEGESAYSLMGRVHAALSEVGLRRRAQKFVMRAYYLGSYDDVLGLAKDYVEFE
Ga0334944_042110_308_613	3300034009	Sub-Biocrust Soil	MSEEPHIPRRYVTIRGKRATAEVWNSIPGRENKEIWLKGVRPILKLAGKEGESAYSLMGRVHAALSEVGLRRRAQKFVMRAYYLGSYDDVLRLAEDYVELE
Ga0334946_085432_139_444	3300034026	Sub-Biocrust Soil	MSEEPHIPRRYVTIRGKRATAEVWSSIPGRENEEVWLKGVRPIVKLAGEEDEHVYSLIGKVHAALSEVGLRRRAQRFVMRAYYLGSYDEVLRLARRFVEFE
Ga0334915_020071_237_542	3300034132	Hypolithic Biocrust	MSQEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEEGESAHNLMGRIHAALSEVGLRRRAQKFVMRAYYLGSYDDVLGLARDYVEFE
Ga0334916_019113_80_385	3300034133	Hypolithic Biocrust	MSQEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEEGESAHNLMGRIHAALSEVGLRRRAQKFVMRAYYLGSYDDVLGLAKDYVEFE
Ga0334933_054786_172_477	3300034136	Sub-Biocrust Soil	MSQEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPILKLAAKEGESAYSLMGRVHAALSEVGLRRRAQKFVMQAYYLGSYDDVLRLAEDYVEFE
Ga0334935_182564_140_445	3300034781	Biocrust	MSEEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPILKLAGEEGESAYSLMGRVHAALSEVGLRRRAQKFVMRAYYLGSYDDVLRLAEDYVELE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086616

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences