Metagenome Family F086778

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086778
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	103 residues
Representative Sequence	METSIVRNFKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRAIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF
Number of Associated Samples	78
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.55 %
% of genes near scaffold ends (potentially truncated)	45.45 %
% of genes from short scaffolds (< 2000 bps)	83.64 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (15.454 % of family members)
Environment Ontology (ENVO)	Unclassified (64.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (79.091 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 82.35% β-sheet: 0.00% Coil/Unstructured: 17.65%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF03704	BTAD	20.00
PF00085	Thioredoxin	4.55
PF12862	ANAPC5	2.73
PF01810	LysE	2.73
PF14117	DUF4287	1.82
PF13191	AAA_16	0.91
PF13505	OMP_b-brl	0.91
PF14344	DUF4397	0.91
PF01266	DAO	0.91
PF05960	DUF885	0.91
PF00069	Pkinase	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	20.00
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	20.00
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.64
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	91.82 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	80.00 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	64.55 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	64.55 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	64.55 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	64.55 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	64.55 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004463\|Ga0063356_100833784	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300004643\|Ga0062591_102866936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	511	Open in IMG/M
3300005093\|Ga0062594_101335799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	722	Open in IMG/M
3300005328\|Ga0070676_10038770	All Organisms → cellular organisms → Bacteria → Proteobacteria	2753	Open in IMG/M
3300005328\|Ga0070676_10061857	All Organisms → cellular organisms → Bacteria → Proteobacteria	2226	Open in IMG/M
3300005328\|Ga0070676_11163286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	585	Open in IMG/M
3300005331\|Ga0070670_100014319	All Organisms → cellular organisms → Bacteria → Proteobacteria	6804	Open in IMG/M
3300005331\|Ga0070670_100015670	All Organisms → cellular organisms → Bacteria → Proteobacteria	6507	Open in IMG/M
3300005331\|Ga0070670_100450045	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300005331\|Ga0070670_100485926	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300005334\|Ga0068869_100313286	All Organisms → cellular organisms → Bacteria → Proteobacteria	1271	Open in IMG/M
3300005338\|Ga0068868_100093070	All Organisms → cellular organisms → Bacteria	2430	Open in IMG/M
3300005338\|Ga0068868_100960568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	780	Open in IMG/M
3300005343\|Ga0070687_100109060	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300005347\|Ga0070668_100288754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1372	Open in IMG/M
3300005354\|Ga0070675_100691092	All Organisms → cellular organisms → Bacteria → Proteobacteria	929	Open in IMG/M
3300005355\|Ga0070671_100800697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	820	Open in IMG/M
3300005355\|Ga0070671_102056198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	509	Open in IMG/M
3300005356\|Ga0070674_101139326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	690	Open in IMG/M
3300005365\|Ga0070688_101064460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	645	Open in IMG/M
3300005367\|Ga0070667_100210904	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300005438\|Ga0070701_10083888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1731	Open in IMG/M
3300005441\|Ga0070700_101843449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	522	Open in IMG/M
3300005456\|Ga0070678_100213960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1599	Open in IMG/M
3300005456\|Ga0070678_101903828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	562	Open in IMG/M
3300005457\|Ga0070662_101494523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	582	Open in IMG/M
3300005459\|Ga0068867_101274869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	677	Open in IMG/M
3300005539\|Ga0068853_101709591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	610	Open in IMG/M
3300005539\|Ga0068853_101736062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	605	Open in IMG/M
3300005549\|Ga0070704_100485865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1069	Open in IMG/M
3300005564\|Ga0070664_100348949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1346	Open in IMG/M
3300005615\|Ga0070702_100105636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1736	Open in IMG/M
3300005615\|Ga0070702_100917029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	687	Open in IMG/M
3300005617\|Ga0068859_100021406	All Organisms → cellular organisms → Bacteria	6489	Open in IMG/M
3300005617\|Ga0068859_103015930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	514	Open in IMG/M
3300005840\|Ga0068870_10403368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	890	Open in IMG/M
3300005840\|Ga0068870_11069508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	579	Open in IMG/M
3300005841\|Ga0068863_102411932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	535	Open in IMG/M
3300006046\|Ga0066652_101328298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	677	Open in IMG/M
3300006844\|Ga0075428_100075178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3689	Open in IMG/M
3300009011\|Ga0105251_10334827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	689	Open in IMG/M
3300009098\|Ga0105245_10556294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1169	Open in IMG/M
3300009148\|Ga0105243_10196566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1766	Open in IMG/M
3300009176\|Ga0105242_11144720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	794	Open in IMG/M
3300009177\|Ga0105248_11037949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	926	Open in IMG/M
3300009553\|Ga0105249_12214789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	622	Open in IMG/M
3300010397\|Ga0134124_10320725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1451	Open in IMG/M
3300010397\|Ga0134124_12214082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	589	Open in IMG/M
3300010399\|Ga0134127_10697317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1055	Open in IMG/M
3300011119\|Ga0105246_10520717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1013	Open in IMG/M
3300011429\|Ga0137455_1129542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	748	Open in IMG/M
3300012903\|Ga0157289_10435378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	502	Open in IMG/M
3300013297\|Ga0157378_10628891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1087	Open in IMG/M
3300013297\|Ga0157378_11915015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	642	Open in IMG/M
3300014325\|Ga0163163_10714705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1065	Open in IMG/M
3300014325\|Ga0163163_12876415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	537	Open in IMG/M
3300015082\|Ga0167662_1029466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	704	Open in IMG/M
3300015371\|Ga0132258_10334821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3737	Open in IMG/M
3300015371\|Ga0132258_10923761	All Organisms → cellular organisms → Bacteria → Proteobacteria	2203	Open in IMG/M
3300015371\|Ga0132258_13328727	All Organisms → cellular organisms → Bacteria → Proteobacteria	1105	Open in IMG/M
3300015373\|Ga0132257_101087619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1009	Open in IMG/M
3300015373\|Ga0132257_103708031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	556	Open in IMG/M
3300015373\|Ga0132257_104535887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	505	Open in IMG/M
3300015374\|Ga0132255_101631066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	978	Open in IMG/M
3300015374\|Ga0132255_103340296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	683	Open in IMG/M
3300018051\|Ga0184620_10264728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	578	Open in IMG/M
3300018073\|Ga0184624_10081397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1364	Open in IMG/M
3300018083\|Ga0184628_10327651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	804	Open in IMG/M
3300018083\|Ga0184628_10467212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	656	Open in IMG/M
3300019886\|Ga0193727_1196522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	507	Open in IMG/M
3300023067\|Ga0247743_1036390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	683	Open in IMG/M
3300025315\|Ga0207697_10029186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2257	Open in IMG/M
3300025315\|Ga0207697_10366940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	639	Open in IMG/M
3300025899\|Ga0207642_10044979	All Organisms → cellular organisms → Bacteria → Proteobacteria	1957	Open in IMG/M
3300025903\|Ga0207680_10228282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1279	Open in IMG/M
3300025907\|Ga0207645_10094242	All Organisms → cellular organisms → Bacteria → Proteobacteria	1927	Open in IMG/M
3300025908\|Ga0207643_10719220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	646	Open in IMG/M
3300025925\|Ga0207650_10034550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3667	Open in IMG/M
3300025925\|Ga0207650_10040851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3396	Open in IMG/M
3300025925\|Ga0207650_10520066	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300025926\|Ga0207659_10396551	All Organisms → cellular organisms → Bacteria → Proteobacteria	1153	Open in IMG/M
3300025926\|Ga0207659_11506844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	575	Open in IMG/M
3300025931\|Ga0207644_10108710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2094	Open in IMG/M
3300025931\|Ga0207644_10280249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1338	Open in IMG/M
3300025931\|Ga0207644_10605483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	910	Open in IMG/M
3300025933\|Ga0207706_10015113	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	6986	Open in IMG/M
3300025933\|Ga0207706_11713324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	506	Open in IMG/M
3300025934\|Ga0207686_11519109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	552	Open in IMG/M
3300025935\|Ga0207709_11130122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	644	Open in IMG/M
3300025940\|Ga0207691_10301269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1377	Open in IMG/M
3300025941\|Ga0207711_10389776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1293	Open in IMG/M
3300025945\|Ga0207679_10125019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2054	Open in IMG/M
3300025960\|Ga0207651_10677801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	907	Open in IMG/M
3300025961\|Ga0207712_11881542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	536	Open in IMG/M
3300025986\|Ga0207658_10180853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1745	Open in IMG/M
3300026023\|Ga0207677_10206566	All Organisms → cellular organisms → Bacteria → Proteobacteria	1565	Open in IMG/M
3300026075\|Ga0207708_10226911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1498	Open in IMG/M
3300026075\|Ga0207708_11314440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	633	Open in IMG/M
3300026088\|Ga0207641_10252893	All Organisms → cellular organisms → Bacteria → Proteobacteria	1646	Open in IMG/M
3300026089\|Ga0207648_10085419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2753	Open in IMG/M
3300026089\|Ga0207648_11864151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	563	Open in IMG/M
3300026142\|Ga0207698_10527526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1153	Open in IMG/M
3300028596\|Ga0247821_10736686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	646	Open in IMG/M
3300031740\|Ga0307468_100010232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3631	Open in IMG/M
3300031740\|Ga0307468_100792816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	807	Open in IMG/M
3300033004\|Ga0335084_11779093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	604	Open in IMG/M
3300033433\|Ga0326726_11504589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	655	Open in IMG/M
3300033486\|Ga0316624_11794869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	567	Open in IMG/M
3300034115\|Ga0364945_0004497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3707	Open in IMG/M
3300034115\|Ga0364945_0046400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1205	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	70.91%
Environmental	Environmental	29.09%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	70.91%
Terrestrial	Environmental → Terrestrial	24.55%
Aquatic	Environmental → Aquatic	4.55%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	40.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	28.18%
Soil	Environmental → Terrestrial → Soil	21.82%
Sediment	Environmental → Aquatic → Sediment	4.55%
Floodplain	Environmental → Terrestrial → Floodplain	1.82%
Roots	Host-Associated → Plants → Roots	1.82%
Peat	Environmental → Terrestrial → Peat	0.91%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	28.18%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	19.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	11.82%
Loam	Environmental → Terrestrial → Soil → Loam	8.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.82%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.82%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	28.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	19.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.82%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.82%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	15.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	10.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	8.18%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	7.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.82%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.91%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.91%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.91%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015082	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11c, vegetated hydrological feature)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063356_1008337842	3300004463	Arabidopsis Thaliana Rhizosphere	METTIGRNFKIFGAMLQKAGPYLLLEILLPGGTLFALLLFLYRRQRDGAELPRAIFVIARVLDGVRRKIIWVGHCYGIASLWRGRARERDGLEALAMAPGL*
Ga0062591_1028669362	3300004643	Soil	SFRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQGGGEMPRAIIVVTRAIGRVHAEIVYVARLYGIASLWRGRAGERDGLEALALAPDM*
Ga0062594_1013357991	3300005093	Soil	METTIGKSFKVFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRAGAEMPRAIFVVVRVIDKVRRKILYVGHLYGIASLWRGRARERDGLEALGIAPGF*
Ga0070676_100387702	3300005328	Miscanthus Rhizosphere	MDTAMETTVGTTIGKSVKTFGAMLRKAGPYLLLEILLPGGTLFALLLFLYRRRRGGAEMPRAIFVIAKVIDNVCRKIIWVGHFYGITSLWRGRARERDGLEALAMAPGF*
Ga0070676_100618575	3300005328	Miscanthus Rhizosphere	MGVGRVRTENLERAIQMETSIVRNVKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRVIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF*
Ga0070676_111632862	3300005328	Miscanthus Rhizosphere	METTIGKSFKVFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRAGAEMPRAIFVVVRVIDKVRRKILYVGHLYGIASLWRGR
Ga0070670_1000143194	3300005331	Switchgrass Rhizosphere	METTIGKSFKFFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRRRAGAEMPRAVFVVVRVIDKVRRKILYVGHLYGIASLWRGRARERDGLEALGIAPGF*
Ga0070670_1000156702	3300005331	Switchgrass Rhizosphere	METTIGKSFKIFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRSGAEMPRAIFVVVRVIDKVRRKILYVGHFYGIASLWRGRARERDGLEALGIAPGF*
Ga0070670_1004500452	3300005331	Switchgrass Rhizosphere	METAVETAVLRSVRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRAIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDGLEALALAPGM*
Ga0070670_1004859261	3300005331	Switchgrass Rhizosphere	YLLLEILLPGGTLFALLLFLYRRRRGGAEMPRAIFVIAKVIDNVCRKIIWVGHFYGITSLWRGRARERDGLEALAMAPGF*
Ga0068869_1003132863	3300005334	Miscanthus Rhizosphere	AGTRGGRVQQEVEEAFRPVAAELPMGVGRVRTENLERAIQMETSIVRNVKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRVIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF*
Ga0068868_1000930703	3300005338	Miscanthus Rhizosphere	MGVGRVRTENLERAIQMETSIVRNFKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRVIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF*
Ga0068868_1009605682	3300005338	Miscanthus Rhizosphere	METTIGKTFKIFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRAGGEMPRAVFVVVRVIDKVRRNILYVGRFYGIASLWRGRARERDGLEALGIAPGI*
Ga0070687_1001090603	3300005343	Switchgrass Rhizosphere	MGVGRVRTENLERAIQMETSIVRNFKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRAIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF*
Ga0070668_1002887543	3300005347	Switchgrass Rhizosphere	METTIGRNFKIFGAMLQKAGPYLLLEILLPGGTLFALLLFLYRRQRDGAELPRAIFVIARVLDGVRRKIIWVGHCYGIASLWRGRARERDGLEALAMAP
Ga0070675_1006910923	3300005354	Miscanthus Rhizosphere	METAVETAVLRSVRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRVIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDGLEALALAPGM*
Ga0070671_1008006972	3300005355	Switchgrass Rhizosphere	METAVLRSFRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRAIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDGLEA
Ga0070671_1020561981	3300005355	Switchgrass Rhizosphere	AGAIETRNERDEQMETTIGKSFKVFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRAGAEMPRAIFVVVRVIDKVRRKILYVGHLYGIASLWRGRARERDGLEALGIAPGF*
Ga0070674_1011393261	3300005356	Miscanthus Rhizosphere	METTIAKSFKIFGAMLQKAGPYLLLEILLPGGTLFALLLFLYRRQKNGAEMPRVVFVMARVIDNVRREILYIGRLYGIASLWK
Ga0070688_1010644601	3300005365	Switchgrass Rhizosphere	METTIGKSFKVFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRAGAEMPRAIFVVVRVIDKVRRKILYVGHLYGIASLWRGRARERDGL
Ga0070667_1002109041	3300005367	Switchgrass Rhizosphere	ETSIVHNFKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRAIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF*
Ga0070701_100838881	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	ETRNERDEQMETTIGKSFKVFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRAGAEMPRAIFVVVRVIDKVRRKILYVGHLYGIASLWRGRARERDGLEALGIAPGF*
Ga0070700_1018434491	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	METAVETAVLRSVRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQKSGAEMPRVIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDGLEALALAPGM*
Ga0070678_1002139603	3300005456	Miscanthus Rhizosphere	METAVLRSFRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRAIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDGLEALALAPGM*
Ga0070678_1019038281	3300005456	Miscanthus Rhizosphere	FGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRAGAEMPRAIFVVVRVIDKVRRKILYVGHLYGIASLWRGRARERDGLEALGIAPGF*
Ga0070662_1014945231	3300005457	Corn Rhizosphere	METAVETAVLRSVRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRAIFVVARAIGKIHAEIVYVARLYGIASLWRG
Ga0068867_1012748692	3300005459	Miscanthus Rhizosphere	VGTTIGKSVKTFGAMLRKAGPYLLLEILLPGGTLFALLLFLYRRRRGGAEMPRAIFVIAKVIDNVCRKIIWVGHFYGITSLWRGRARERDGLEALAMAPGF*
Ga0068853_1017095912	3300005539	Corn Rhizosphere	METTIGKSFKVFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRAGAEMPRAIFVVVRVIDKVRRKILYVGHLYGIASLWRGRARERDGLEALGIA
Ga0068853_1017360621	3300005539	Corn Rhizosphere	ELPMGVGRVRTENLERAIQMETSIVRNVKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRVIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF*
Ga0070704_1004858653	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MGVGRVRTENLERAIQMETSIVRNVKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRVIFVVARVIDKVRAEIVYIARLHGIASLWRG
Ga0070664_1003489492	3300005564	Corn Rhizosphere	METTIGKSFKVFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRRRAGAEMPRAVFVVVRVIDKVRRKILYVGHLYGIASLWRGRARERDGLEALGIAPGF*
Ga0070702_1001056363	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MGVGRVRTENLERAIQMETSIVRNVKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRVIFVVARVIDKVRAEIVYIARLHGIASLWR
Ga0070702_1009170291	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	METAVLRSFRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRAIFVVARAIGKIHAEIVYVARLYGIASL
Ga0068859_1000214065	3300005617	Switchgrass Rhizosphere	MGVGRVRTENLERAIQMETSIVRNVKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRVIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIA
Ga0068859_1030159301	3300005617	Switchgrass Rhizosphere	AGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRAIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDGLEALALAPGM*
Ga0068870_104033682	3300005840	Miscanthus Rhizosphere	LKPERESERMDTAMETTVGTTIGKSVKTFGAMLRKAGPYLLLEILLPGGTLFALLLFLYRRRRGGAEMPRAIFVIAKVIDNVCRKIIWVGHFYGITSLWRGRARERDGLEALAMAPGF*
Ga0068870_110695082	3300005840	Miscanthus Rhizosphere	MGVGRVRTENLERAIQMETSIVRNVKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRAIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF*
Ga0068863_1024119322	3300005841	Switchgrass Rhizosphere	METAVETAVLRSVRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRAIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDGLEA
Ga0066652_1013282982	3300006046	Soil	METTIGKTFKIFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRSGADMPRAIFVVVRVIDKVRREIVYVGRLYGIASLWRGRARERDGL
Ga0075428_1000751782	3300006844	Populus Rhizosphere	METTIVRSVRIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGAELPRVIFVVERVIGNLRREIVYVARLYGIASLWRGRARERDGLEALAMAPGF*
Ga0105251_103348272	3300009011	Switchgrass Rhizosphere	METTIGKSFKIFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRSGAEMPRAIFVVVRVIDKVRRKILYVGHFYGIASLWRGRARERDGLE
Ga0105245_105562941	3300009098	Miscanthus Rhizosphere	METSIVRNVKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRAIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF*
Ga0105243_101965662	3300009148	Miscanthus Rhizosphere	METSIVRNFKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRAIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF*
Ga0105242_111447202	3300009176	Miscanthus Rhizosphere	METSIVRNVKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRVIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF*
Ga0105248_110379491	3300009177	Switchgrass Rhizosphere	ERAIQMETSIVRNFKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRAIFVVARVIDKVRAEIVYIARPHGIASLWRGRARERDGLEALAIAPGF*
Ga0105249_122147892	3300009553	Switchgrass Rhizosphere	METSIVRNVKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRVIFVVARVIDKVRAEIVYIARLHGIASLWRG
Ga0134124_103207252	3300010397	Terrestrial Soil	VETAVLRSFRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQKSGAEMPRVIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDGLEALALAPGM*
Ga0134124_122140821	3300010397	Terrestrial Soil	KAGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRAIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDGLEALALAPGM*
Ga0134127_106973172	3300010399	Terrestrial Soil	METSIVRNVKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRVIFVVARVIDKVRAEIVYIARLHGIASLWRGQARERDGLEALAIAPGF*
Ga0105246_105207172	3300011119	Miscanthus Rhizosphere	METTIGKSFKVFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRSGAEMPRAIFVVVRVIDKVRRKILYVGHFYGIASLWRGRARERDGLEALGIAPGF*
Ga0137455_11295422	3300011429	Soil	METAVLRSFKIFGSLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRAIFVVARAIGKVRAEIVYVARLYGIASLWRGRASERDGLEALALAPDM*
Ga0157289_104353781	3300012903	Soil	METSIVRNFKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRVIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF*
Ga0157378_106288912	3300013297	Miscanthus Rhizosphere	METTIGKSFKVFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRAGAEMPRVIFVVVRVIDKVRRKILYVGHLYGIASLWRGRARERDGLEALGIAPGF*
Ga0157378_119150152	3300013297	Miscanthus Rhizosphere	METAVETAVLRPVRIYGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRAIFVVARAIGKIYAEIVYVARLYGIASLWRGRASERDGLEALALAPGM*
Ga0163163_107147051	3300014325	Switchgrass Rhizosphere	AQTKPGNERDDEMETTIGKSFKFFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRRRAGAEMPRAVFVVVRVIDKVRRKILYVGHLYGIASLWRGRARERDGLEALGIAPGF*
Ga0163163_128764152	3300014325	Switchgrass Rhizosphere	RIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRAIFVVARAIGKIYAEIVYVARLYGIASLWRGRASERDGLEALALAPGM*
Ga0167662_10294661	3300015082	Glacier Forefield Soil	MATTLVHRFKGLGLLLQKAGPYLLIEILLPGGSLFALLLFLYRKRQQSGAEMPRLIVVLARAVGTMREKIVFAARLYGIASLWRGREPERDGLEALAIAPPM*
Ga0132258_103348212	3300015371	Arabidopsis Rhizosphere	METAVLRSFRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQKSGAEMPRVIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDGLEALALAPGM*
Ga0132258_109237614	3300015371	Arabidopsis Rhizosphere	METRIVRSFKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYRRRQQDGTPMPRAIFIVARVIDKVRAEIVYIARLHDVASLWRGRTRERDGLEALGIAPGY*
Ga0132258_133287271	3300015371	Arabidopsis Rhizosphere	VLRSFRIFGTLLQKAGPYLLLEILLPGGTLFALLLYLYKRRQQSGAELPRAIFVVPRAIGKVQAEIVYVARLYGIASLWRGRASERDGLEALALAPGM*
Ga0132257_1010876192	3300015373	Arabidopsis Rhizosphere	METRIVRSFKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRAIFIVARVIDKVRAEIVYIARLHDIASLWRGRARERDGLEALGLAPGF*
Ga0132257_1037080311	3300015373	Arabidopsis Rhizosphere	METAVLRSFRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQKSGAEMPRVIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDGLEALALAPG
Ga0132257_1045358871	3300015373	Arabidopsis Rhizosphere	METTIGKSFKIFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRSGAEMPRAIFVVVRVIDKVRRKILYVGHFYGIASLWRGRARE
Ga0132255_1016310662	3300015374	Arabidopsis Rhizosphere	METAVLRSFKIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQKSGAEMPRVIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDGLEALALAPGM*
Ga0132255_1033402962	3300015374	Arabidopsis Rhizosphere	METTIGKSFKIFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRSGAEMPRAIFVVARVVDKVRRKILYVGQLYGIASLWRGRARERDGLEALGIAPGF*
Ga0184620_102647281	3300018051	Groundwater Sediment	METAVLRSFKIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQGGAEMPRAIFVVTRAIGKVRAEIVYVARLYGIASLWRGRAGERDGLEALA
Ga0184624_100813972	3300018073	Groundwater Sediment	MDTAMETTVGTTIGKSVKTFGAMLRKAGPYLLLEILLPGGTLFALLLFLYRRRRGGAEMPRAIFVIAKVIDNVCRKIIWVGHFYGITSLWRGRARERDGLEALAMAPGF
Ga0184628_103276511	3300018083	Groundwater Sediment	VARITGPASNGEELIMEAIVARNIKIFGALLQKAGPYLLLEILLPGGTLFALLLLLYRRRQQQGAEMPRAIFVVARVIGRASARIVYIARLYGIASVWRGRARERDGLEALAIAPCM
Ga0184628_104672122	3300018083	Groundwater Sediment	METAVLRSFKIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRAILVVVRAIDKVRMEIVYVARLYGIASLWRGRAGERDGLEALALAPDM
Ga0193727_11965221	3300019886	Soil	ETTVVRSIKLFGALLQKAGPYLLLEILLPGGTLFALLLLLYRRRQQQRAELPRVIFVVAHVLDRATAKIVYVARLHGIASVWRGRARERDGLEALAIAPNL
Ga0247743_10363902	3300023067	Soil	MGVGRVRTENLERAIQMETSIVRNFKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRAIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF
Ga0207697_100291863	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	METTIGKSFKVFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRAGAEMPRAIFVVVRVIDKVRRKILYVGHLYGIASLWRGRARERDGLEALGIAPGF
Ga0207697_103669402	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	METTIGKSFKIFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRSGAEMPRAIFVVVRVIDKVRRKILYVGHFYGIASLWRGRARERDGLEALGIAPGF
Ga0207642_100449793	3300025899	Miscanthus Rhizosphere	MGVGRVRTENLERAIQMETSIVRNVKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRAIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF
Ga0207680_102282822	3300025903	Switchgrass Rhizosphere	METAVETAVLRSVRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRAIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDGLEALALAPGM
Ga0207645_100942423	3300025907	Miscanthus Rhizosphere	MGVGRVRTENLERAIQMETSIVRNFKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRVIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF
Ga0207643_107192202	3300025908	Miscanthus Rhizosphere	LKPERESERMDTAMETTVGTTIGKSVKTFGAMLRKAGPYLLLEILLPGGTLFALLLFLYRRRRGGAEMPRAIFVIAKVIDNVCRKIIWVGHFYGITSLWRGRARERDGLEALAMAPGF
Ga0207650_100345502	3300025925	Switchgrass Rhizosphere	METTIGRNFKIFGAMLQKAGPYLLLEILLPGGTLFALLLFLYRRQRDGAELPRAIFVIARVLDGVRRKIIWVGHCYGIASLWRGRARERDGLEALAMAPGL
Ga0207650_100408513	3300025925	Switchgrass Rhizosphere	METTIGKSFKFFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRRRAGAEMPRAVFVVVRVIDKVRRKILYVGHLYGIASLWRGRARERDGLEALGIAPGF
Ga0207650_105200661	3300025925	Switchgrass Rhizosphere	YLLLEILLPGGTLFALLLFLYRRRRGGAEMPRAIFVIAKVIDNVCRKIIWVGHFYGITSLWRGRARERDGLEALAMAPGF
Ga0207659_103965513	3300025926	Miscanthus Rhizosphere	MEVVIRTLEALRRCAQRLGPYLLLELLMPGGTLFALLLFLYKRRQQSGAEMPRAIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDGLEALALAPGM
Ga0207659_115068442	3300025926	Miscanthus Rhizosphere	ENLERAIQMETSIVRNFKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRAIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF
Ga0207644_101087103	3300025931	Switchgrass Rhizosphere	METAVLRSFRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRAIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDGLEALALAPGM
Ga0207644_102802491	3300025931	Switchgrass Rhizosphere	METAVETAVLRSVRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRAIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDG
Ga0207644_106054831	3300025931	Switchgrass Rhizosphere	TRNERDEQMETTIGKSFKIFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRSGAEMPRAIFVVVRVIDKVRRKILYVGHFYGIASLWRGRARERDGLEALGIAPGF
Ga0207706_100151131	3300025933	Corn Rhizosphere	MGVGRVRTENLERAIQMETSIVRNVKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRAIFVVARVIDKVRAEIVYIARLHGIA
Ga0207706_117133241	3300025933	Corn Rhizosphere	METAVETAVLRSVRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRAIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDGLEAL
Ga0207686_115191092	3300025934	Miscanthus Rhizosphere	MGVGRVRTENLERAIQMETSIVRNVKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRVIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF
Ga0207709_111301221	3300025935	Miscanthus Rhizosphere	TEVEEALRPVAAELPMGVGRVRTENLERAIQMETSIVRNFKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRAIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF
Ga0207691_103012692	3300025940	Miscanthus Rhizosphere	MDTAMETTVGTTIGKSVKTFGAMLRKAGPYLLLEILLPGGTLFALLLFLYRRRRGGAEMPRAIFVIAKVIDNVCRKIIWVGHFYSITSLWRGRARERDGLEALAMAPGF
Ga0207711_103897762	3300025941	Switchgrass Rhizosphere	MGVGRVRTENLERAIQMETSIVRNVKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRAIFVVARVIDKVRAEIVYIARPHGIASLWRGRARERDGLEALAIAPGF
Ga0207679_101250192	3300025945	Corn Rhizosphere	METTIGKSFKIFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRRRAGAEMPRAVFVVVRVIDKVRRKILYVGHLYGIASLWRGRARERDGLEALGIAPGF
Ga0207651_106778011	3300025960	Switchgrass Rhizosphere	KFFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRRRAGAEMPRAVFVVVRVIDKVRRKILYVGHLYGIASLWRGRARERDGLEALGIAPGF
Ga0207712_118815422	3300025961	Switchgrass Rhizosphere	FGALLQKAGPYLLLEILLPGGTLFALLLFIYKRRQQDGTPMPRVIFIVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF
Ga0207658_101808531	3300025986	Switchgrass Rhizosphere	METAVETAVLRSVRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQSGAEMPRAIFVVARAIGKIHAEIVYVARLYGIASLWRGRASEREAWEGEQLGRRPLASGAQLSAP
Ga0207677_102065662	3300026023	Miscanthus Rhizosphere	METTIGKTFKIFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRAGGEMPRAVFVVVRVIDKVRRNILYVGRFYGIASLWRGRARERDGLEALGIAPGI
Ga0207708_102269112	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	METTIGKSFKVFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRAGAEMPRAIFVVVRVIDKVRRKILYVGHLYGIASLWRGRARER
Ga0207708_113144402	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	METAVLRSFRIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQKSGAEMPRVIFVVARAIGKIHAEIVYVARLYGIASLWRGRASERDGLEALALAPGM
Ga0207641_102528934	3300026088	Switchgrass Rhizosphere	GGRVQQEVEEAFRPVAAELPMGVGRVRTENLERAIQMETSIVRNVKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRAIFVVARVIDKVRAEIVYIARLHGIASLWRGRARERDGLEALAIAPGF
Ga0207648_100854192	3300026089	Miscanthus Rhizosphere	METTIGKSFKVFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRAGAEMPRAIFVVVRMIDKVRRKILYVGHLYGIASLWRGRARERDGLEALGIAPGF
Ga0207648_118641511	3300026089	Miscanthus Rhizosphere	VGTTIGKSVKTFGAMLRKAGPYLLLEILLPGGTLFALLLFLYRRRRGGAEMPRAIFVIAKVIDNVCRKIIWVGHFYGITSLWRGRARERDGLEALAMAPGF
Ga0207698_105275262	3300026142	Corn Rhizosphere	METTIGKSFKVFGAMLQKAGPYLLLEILLPGGTLIALLLFLYRRQRAGAEMPRAIFVVVRVIDKVRRKILYVGHLYGIASLWRGRARERDGLEALGIAP
Ga0247821_107366862	3300028596	Soil	METTLKSVKIFGAMLQKAGPYLLLEILLPGGTLFALLLFLYRRQRDGAELPRAVFVIVRVIDNVRRKIVWVGHFYGIASLWRGQARERDGLEALAMAPGF
Ga0307468_1000102323	3300031740	Hardwood Forest Soil	MGVGGVRTENLERAIQMETSIVRSVKIFGALLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQDGTPMPRAIFIVARVIDKVRAEIVYIARLHDIASLWRGRARERDGLEALGLAPGF
Ga0307468_1007928161	3300031740	Hardwood Forest Soil	METAVLRSFKIFGTLVRKAGPYLLLEILLPGGTLFALLLFLYRRRQQGGAEMPRAIFVVTRAIGKVRAEIVYVARLYGIASLWRGRAGERDGLEALALAPLM
Ga0335084_117790931	3300033004	Soil	AGPYLLLEILLPGGTLIALLLFLYRRQRDRAEMPRVIFVVARAIDAVRRKLLYVGRFYGIASLWRGRARERDGLEALGIAPVI
Ga0326726_115045892	3300033433	Peat Soil	METTVVRSIKLFGALLQKAGPYLLLEILLPGGTLFALLLLLYRRRQQHGELPRVIFVMARVIDRATAKIVYVARLYGIASVWRGRARERDGLEALGIAPNL
Ga0316624_117948691	3300033486	Soil	MKTTVLSSFKGFGTLLQKAGPYLLLEILLPGGTFFALVLFLCKRSRQPGATDAPRANVVVRALSAVRGELDFVARPSGIASAWRGRNRERDGLEALAIAPTV
Ga0364945_0004497_674_982	3300034115	Sediment	METAVLRSFKIFGTLLQKAGPYLLLEILLPGGTLFALLLFLYKRRQQGGAEMPRAIFVVTRAIGKVRAEIVYVARLYGIASLWRGRAGERDGLEALALAPDM
Ga0364945_0046400_38_346	3300034115	Sediment	METTVVRSIKLFGALLQKAGPYLLLEILLPGGTLFALLLLLYRRRQQQGGELPRVIFVVARVLDRATAKIVYVARLYGIASVWRGRARERDGLEALALAPNL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086778

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences