Metagenome / Metatranscriptome Family F086786

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086786
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	66 residues
Representative Sequence	MNSFASNLYRDLTCAAAAALITLVLSLSFVQSTSVPPGMHAGASRTVAMQSDHAWFGQPEPAVLVD
Number of Associated Samples	87
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.16 %
% of genes near scaffold ends (potentially truncated)	20.00 %
% of genes from short scaffolds (< 2000 bps)	71.82 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.636 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (13.636 % of family members)
Environment Ontology (ENVO)	Unclassified (22.727 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.182 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 32.98% β-sheet: 0.00% Coil/Unstructured: 67.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00392	GntR	38.18
PF00005	ABC_tran	16.36
PF00056	Ldh_1_N	10.00
PF02866	Ldh_1_C	8.18
PF13346	ABC2_membrane_5	2.73
PF02771	Acyl-CoA_dh_N	1.82
PF09317	ACDH_C	1.82
PF13466	STAS_2	1.82
PF12730	ABC2_membrane_4	0.91
PF03886	ABC_trans_aux	0.91
PF12412	DUF3667	0.91
PF11799	IMS_C	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0039	Malate/lactate dehydrogenase	Energy production and conversion [C]	18.18
COG1486	Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase	Carbohydrate transport and metabolism [G]	10.00
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.64 %
Unclassified	root	N/A	16.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.64 %
Unclassified	root	N/A	16.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.64 %
Unclassified	root	N/A	16.36 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.91 %
Unclassified	root	N/A	16.36 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	27.27 %
Unclassified	root	N/A	16.36 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.36 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	4.55 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.82 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.91 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.36 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.55 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.91 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.91 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.36 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.55 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.91 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.91 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.36 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.55 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.91 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.91 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001084\|JGI12648J13191_1009685	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300001545\|JGI12630J15595_10082044	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300001593\|JGI12635J15846_10355343	All Organisms → cellular organisms → Bacteria → Proteobacteria	897	Open in IMG/M
3300001593\|JGI12635J15846_10372827	All Organisms → cellular organisms → Bacteria → Proteobacteria	869	Open in IMG/M
3300001593\|JGI12635J15846_10779629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	548	Open in IMG/M
3300004092\|Ga0062389_101213431	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300005434\|Ga0070709_10030038	All Organisms → cellular organisms → Bacteria → Proteobacteria	3257	Open in IMG/M
3300005437\|Ga0070710_10063543	All Organisms → cellular organisms → Bacteria → Proteobacteria	2109	Open in IMG/M
3300005458\|Ga0070681_10015641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7557	Open in IMG/M
3300005526\|Ga0073909_10586701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	549	Open in IMG/M
3300005533\|Ga0070734_10043644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2757	Open in IMG/M
3300005534\|Ga0070735_10069685	All Organisms → cellular organisms → Bacteria → Proteobacteria	2269	Open in IMG/M
3300005538\|Ga0070731_10026978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	3918	Open in IMG/M
3300005538\|Ga0070731_11087080	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005541\|Ga0070733_10266707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1128	Open in IMG/M
3300005542\|Ga0070732_10218492	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300005591\|Ga0070761_10010119	All Organisms → cellular organisms → Bacteria → Proteobacteria	5330	Open in IMG/M
3300005591\|Ga0070761_10408319	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300006806\|Ga0079220_11519336	Not Available	575	Open in IMG/M
3300006806\|Ga0079220_11894318	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300007255\|Ga0099791_10061670	All Organisms → cellular organisms → Bacteria	1689	Open in IMG/M
3300007258\|Ga0099793_10612234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	546	Open in IMG/M
3300009826\|Ga0123355_10622973	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300009826\|Ga0123355_10767939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1085	Open in IMG/M
3300009826\|Ga0123355_11078742	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300009826\|Ga0123355_11530739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	648	Open in IMG/M
3300010043\|Ga0126380_11916467	Not Available	540	Open in IMG/M
3300010049\|Ga0123356_10000345	All Organisms → cellular organisms → Bacteria → Proteobacteria	53562	Open in IMG/M
3300010049\|Ga0123356_10185460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2106	Open in IMG/M
3300010049\|Ga0123356_11458376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	843	Open in IMG/M
3300010049\|Ga0123356_12024603	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300010049\|Ga0123356_13847799	Not Available	518	Open in IMG/M
3300010162\|Ga0131853_10389122	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300010359\|Ga0126376_12361330	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300010359\|Ga0126376_12428968	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300010362\|Ga0126377_10429591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1339	Open in IMG/M
3300010376\|Ga0126381_100750520	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300010862\|Ga0126348_1067561	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300011120\|Ga0150983_15926527	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300012202\|Ga0137363_10977349	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300012205\|Ga0137362_11035455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	698	Open in IMG/M
3300012361\|Ga0137360_10110186	All Organisms → cellular organisms → Bacteria	2124	Open in IMG/M
3300012361\|Ga0137360_10520796	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300012582\|Ga0137358_10308127	Not Available	1075	Open in IMG/M
3300012918\|Ga0137396_10089183	All Organisms → cellular organisms → Bacteria	2185	Open in IMG/M
3300012930\|Ga0137407_10714038	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300015054\|Ga0137420_1076612	All Organisms → cellular organisms → Bacteria	2444	Open in IMG/M
3300015241\|Ga0137418_10003637	All Organisms → cellular organisms → Bacteria → Proteobacteria	14169	Open in IMG/M
3300015241\|Ga0137418_10112647	All Organisms → cellular organisms → Bacteria	2435	Open in IMG/M
3300017927\|Ga0187824_10047822	All Organisms → cellular organisms → Bacteria → Proteobacteria	1315	Open in IMG/M
3300017927\|Ga0187824_10103345	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300017930\|Ga0187825_10079166	All Organisms → cellular organisms → Bacteria → Proteobacteria	1127	Open in IMG/M
3300017961\|Ga0187778_10091861	Not Available	1880	Open in IMG/M
3300017970\|Ga0187783_10001643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	16546	Open in IMG/M
3300017970\|Ga0187783_10011879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6408	Open in IMG/M
3300017970\|Ga0187783_10257971	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300017972\|Ga0187781_10735641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	714	Open in IMG/M
3300017973\|Ga0187780_10849395	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300017974\|Ga0187777_10061033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2433	Open in IMG/M
3300018062\|Ga0187784_10191939	All Organisms → cellular organisms → Bacteria	1667	Open in IMG/M
3300019888\|Ga0193751_1162260	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300020022\|Ga0193733_1001296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7523	Open in IMG/M
3300020579\|Ga0210407_10289423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1278	Open in IMG/M
3300021088\|Ga0210404_10184388	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300021088\|Ga0210404_10796754	Not Available	540	Open in IMG/M
3300021171\|Ga0210405_10107901	All Organisms → cellular organisms → Bacteria	2198	Open in IMG/M
3300021377\|Ga0213874_10053315	All Organisms → cellular organisms → Bacteria → Proteobacteria	1247	Open in IMG/M
3300021401\|Ga0210393_10197792	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300021403\|Ga0210397_11462084	Not Available	531	Open in IMG/M
3300021477\|Ga0210398_10085806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2557	Open in IMG/M
3300021559\|Ga0210409_10573243	All Organisms → cellular organisms → Bacteria → Proteobacteria	996	Open in IMG/M
3300021560\|Ga0126371_10953276	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300022722\|Ga0242657_1129193	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300024284\|Ga0247671_1082797	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300024330\|Ga0137417_1424420	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300025916\|Ga0207663_10052284	All Organisms → cellular organisms → Bacteria → Proteobacteria	2548	Open in IMG/M
3300025929\|Ga0207664_11935065	Not Available	512	Open in IMG/M
3300025939\|Ga0207665_11674580	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300026341\|Ga0257151_1004446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1434	Open in IMG/M
3300026376\|Ga0257167_1051747	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300027297\|Ga0208241_1083927	Not Available	511	Open in IMG/M
3300027535\|Ga0209734_1001017	All Organisms → cellular organisms → Bacteria	4572	Open in IMG/M
3300027535\|Ga0209734_1073006	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300027565\|Ga0209219_1009627	Not Available	2210	Open in IMG/M
3300027565\|Ga0209219_1096236	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300027590\|Ga0209116_1019275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1405	Open in IMG/M
3300027591\|Ga0209733_1002082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4640	Open in IMG/M
3300027605\|Ga0209329_1003553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2609	Open in IMG/M
3300027645\|Ga0209117_1047466	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300027826\|Ga0209060_10067766	Not Available	1694	Open in IMG/M
3300027842\|Ga0209580_10270646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	845	Open in IMG/M
3300027853\|Ga0209274_10002117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9921	Open in IMG/M
3300027867\|Ga0209167_10780211	Not Available	521	Open in IMG/M
3300027869\|Ga0209579_10034263	All Organisms → cellular organisms → Bacteria → Proteobacteria	2757	Open in IMG/M
3300027869\|Ga0209579_10073455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1809	Open in IMG/M
3300027894\|Ga0209068_10781403	Not Available	562	Open in IMG/M
3300028789\|Ga0302232_10600254	Not Available	541	Open in IMG/M
3300028792\|Ga0307504_10000475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8056	Open in IMG/M
3300030490\|Ga0302184_10415505	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300030524\|Ga0311357_10411301	Not Available	1275	Open in IMG/M
3300030617\|Ga0311356_11738795	Not Available	557	Open in IMG/M
3300030997\|Ga0073997_11748752	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300031236\|Ga0302324_101033532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1113	Open in IMG/M
3300031715\|Ga0307476_10026567	All Organisms → cellular organisms → Bacteria	3814	Open in IMG/M
3300031715\|Ga0307476_10173565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1557	Open in IMG/M
3300031720\|Ga0307469_11046220	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300031823\|Ga0307478_10780424	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300033290\|Ga0318519_10952636	Not Available	532	Open in IMG/M
3300033486\|Ga0316624_10004893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6140	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.00%
Host-Associated	Host-Associated	10.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.45%
Arthropoda	Host-Associated → Arthropoda	9.09%
Aquatic	Environmental → Aquatic	4.55%
Plants	Host-Associated → Plants	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.91%
Digestive System	Host-Associated → Arthropoda → Digestive System	9.09%
Peat	Environmental → Terrestrial → Peat	4.55%
Freshwater	Environmental → Aquatic → Freshwater	3.64%
Sediment	Environmental → Aquatic → Sediment	0.91%
Roots	Host-Associated → Plants → Roots	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.91%
Loam	Environmental → Terrestrial → Soil → Loam	21.82%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	9.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.18%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.36%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	9.09%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.82%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	10.91%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	9.09%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.45%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.82%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.91%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.91%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024284	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12648J13191_10096852	3300001084	Forest Soil	MNTLLTTLYRDVACGTGAVLITLLLGLSFVQSTSVPPGMHAHSFVAVQSPHAWFGQPEPAVLVD*
JGI12630J15595_100820442	3300001545	Forest Soil	LTCAAAAALITLVFSLSFVQSTSVPPGTHAGASRSVAMQSDHAWFGQPEPAVLVD*
JGI12635J15846_103553431	3300001593	Forest Soil	MNSFASNLYRDLTCAAAAALITLVFSLSFVQSTSVPPGAHAGASRTVAMQSDHGWFGQPEPAVLVD*
JGI12635J15846_103728271	3300001593	Forest Soil	MNSFASNLYRDVTCAAAAALITLVFSLSFVESTAVPPGMHAGASRTVAMQSDHAWFGQPEPAVLVD*
JGI12635J15846_107796291	3300001593	Forest Soil	MNSFASTLYRDVTCAAAAALITLVFSLSFVQSTSVPPGTHAGTTRTVGLQSDHAWFGQPEPAVLVD*
Ga0062389_1012134313	3300004092	Bog Forest Soil	MNTFLATLYRDVACATAAVLITLLLGLSFLQSTSVPPGMHAHSFVAVQPPHAWFGQPEPAVLVD*
Ga0070709_100300382	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNTTVTTLYRDVTCGAAAALITLILSVAFIQSTSVPPGMHAGTTTHFVALQPQHAWFGQPEPAVLVD*
Ga0070710_100635434	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MNTIVTTLYRDVTCGAAAALITLILSVAFIQSTSVPPGMRAATTTHFVALQPQHAWFGQPEPAVL
Ga0070681_100156411	3300005458	Corn Rhizosphere	MNTIVTTLYRDVTCGAAAALITLILSVAFIQSTSVPPGMRAATTTHFVALQPQHAWFGQPEPAVLVD*
Ga0073909_105867011	3300005526	Surface Soil	MNSFASNLYRDLTCAAAAALITVVFSLSFVQSTSVPPGMHAGASRTVALQSDHGWFGQPEPAVLVD*
Ga0070734_100436444	3300005533	Surface Soil	MNTYVSIALRDLACGTAAALITLILSASFVKSTSAAPGFHPGGSHKTHVFVALQPPDAWFGQPEPAVLVD*
Ga0070735_100696854	3300005534	Surface Soil	MNTYVSIALRDLACGTAAALITLILSASFVKSTSTAPGFHPGGSHKTHVFVALQPPDAWFGQPEPAVLVD*
Ga0070731_100269784	3300005538	Surface Soil	MNTYVSIALRDLACGAAAALITLILSAAFVQSTATPPGSHAVGSQTTRVFVALQPRDAWFGQPEPAVLVD*
Ga0070731_110870802	3300005538	Surface Soil	MNTYVSIALRDLACGTAPALITLILSASFVKSTSTAPGFHPGGSHKTHVFVALQPPDAWFGQPEPAVLVD*
Ga0070733_102667073	3300005541	Surface Soil	MNTYVSIALRDLTCGTAAALITLILSASFVKSTSTAPGFHPGGSHKTHVFVALQPPDAWFGQPEPAVLVD*
Ga0070732_102184922	3300005542	Surface Soil	MNTFVNTLYRDFACGSAAVLITLILSAAFVQATSLPPGMHATSSNVFIALQPQHAWFGQPEPAVLVD*
Ga0070761_100101192	3300005591	Soil	MNTFLTTLYRDVACGTAAVLITLLLGLSFVQSTSVPPGMHAHSFVAVQPPHAWFGQPEPAVLVD*
Ga0070761_104083192	3300005591	Soil	MNTYVSIALRDLACGAAAALITLILSASFVQSTSAPPGSHAAGSHTTRVFVALQPRDAWFGQPEPAVLVD*
Ga0079220_115193362	3300006806	Agricultural Soil	MNTTVTTLYRDVTCGAAAALITLILSAAFVQSTSVPPGMHAAATHFVALQPEHAWFGQPEPAVLVD*
Ga0079220_118943181	3300006806	Agricultural Soil	TLYRDVTCGAAAALITLILSVAFVQSTSVPPGLHAAATTHFVALQPQHAWFGQPEPAVLVD*
Ga0099791_100616703	3300007255	Vadose Zone Soil	MNSFASNLYRDLTCAAAAALITLVFSLSFVQSTSVPPGMHAGASRTVAMRSDHAWFGQPEPAVLVD*
Ga0099793_106122341	3300007258	Vadose Zone Soil	MNSFASNLYRDLTCAAAAALITLVFSLSFVQSTSVPPGMHAGASRTVAMRSDHGWFGQPEPAVLVD*
Ga0123355_106229733	3300009826	Termite Gut	MNPLAATLYRDVTCGAAAILITVLLSLTFVQSTALPPGMHAQGTPFLSVQPAHAWFGQPEPAVLVD*
Ga0123355_107679392	3300009826	Termite Gut	MDKESIMNTSSTTLYRDATCGAAAMLITTILSLTFVQSTALPPGMHADGGSFIAVQPAHAWFGQPEPAVLVD*
Ga0123355_110787423	3300009826	Termite Gut	MNMLATTLYRDVTCGAAAMLITAVLSLTFVQSTALPPGMHAEGGSFIAVQPAHAWFGQPEPAVLVD*
Ga0123355_115307393	3300009826	Termite Gut	MNLAKTLYRDVTCGAAAMLITAILSLTFVQSTALPPGMHADGGSFIAVQPAHAWFGQPEPAVLVD*
Ga0126380_119164672	3300010043	Tropical Forest Soil	MNTSLTTVYRDVTCGAAAALITLIMGMAFLQSTSVPPGAHAAATTHFVALQPKHAWFGQPEPAVLVD*
Ga0123356_1000034551	3300010049	Termite Gut	MNTFATNLYRDVMCGAAAMLITAVLSLTFVQSTALPPGMHSDGGSFIVVQPAHAWFGQPEPAVLVD*
Ga0123356_101854602	3300010049	Termite Gut	MNPLAATLYRDVTCGAAAILITVLLSLTFVQSTALPPGMHAQGTAFLSVQPAHAWFGQPEPAVLVD*
Ga0123356_114583764	3300010049	Termite Gut	MNTFATTLYRDVTCGAAAMLITAILSLTFVQSTALPPGMHADGGSFIAVQPAHAWFGQPEPAVLVD*
Ga0123356_120246032	3300010049	Termite Gut	MNAFVTDLYRDVTCGVAAMVITAVLSLTFVQSTALPPGMHSDGGSFIAVQPAHAWFGQPQPAVLVD*
Ga0123356_138477993	3300010049	Termite Gut	MNALPNALYRDLTCGAAAVLITTALSLTFVQSTALPPGMHADGGSFIAVQPAHVWF
Ga0131853_103891221	3300010162	Termite Gut	STMNAFAMNLYRDVTCGAAAMLITAILSLTFVQSTALPPGMHADGGSFLAVQPAHVWFGQPTPAVLVD*
Ga0126376_123613302	3300010359	Tropical Forest Soil	ACAAAAVLITLVVSLSFVQSTALTPGARAQATAQSVALQSDHAWFGQPQPAVLVD*
Ga0126376_124289682	3300010359	Tropical Forest Soil	MNTSLTTVYRDVTCGAAAAIITLILGLAFLQSTSVPPGAHAAATTHFVALQPKHAWFGQPEPAVLVD*
Ga0126377_104295911	3300010362	Tropical Forest Soil	SLTTLYRDVTCGAAAAIITLILSLAFLQSTSVPPGTHAATTTHFVALQPKHAWFGQPEPAVLVD*
Ga0126381_1007505203	3300010376	Tropical Forest Soil	MNTFANTLYRDVTCGAAAMLITAVLSLTFVQSTALPPGMHAAGAAFIAVQPAHAWFGQPEPAVLVD*
Ga0126348_10675612	3300010862	Boreal Forest Soil	ERDPQTAHTAKETTMNSFASNLYRDLTCATAAALITLVFSLSFVQSTSVPPGMHAGASRTVAMQSDHAWFGQPEPAVLVD*
Ga0150983_159265271	3300011120	Forest Soil	NTFANTLYRDLTCGVAAILITAVLGMSFVSSTAVPPGTHAAAVRTVGVQPEHAWFGQPEPAVLVD*
Ga0137363_109773492	3300012202	Vadose Zone Soil	MNSFASNLYRDLTCAAAAALITLVLSLSFVQSTSVPPGMHVGASRTVAMQSDHAWFGQPEPAVLVD*
Ga0137362_110354552	3300012205	Vadose Zone Soil	MNSFASNLYRDLTCAAAAALITLVLSLSFVQSTSVPPGMHAGASRTVAMQSDHAWFGQPEPAVLVD*
Ga0137360_101101861	3300012361	Vadose Zone Soil	MNSFASNLYRDLTCAAAAALITLVFSLSFVQSTSVPPGTHAGASRTVAMRSDHAWFGQPEPAVLVD*
Ga0137360_105207962	3300012361	Vadose Zone Soil	MNSFASNLYRDLTCAAAAALITLVLSLSFVQSTSVPPGMHVGASRTVGMQSDHAWFGQPEPAVLVD*
Ga0137358_103081271	3300012582	Vadose Zone Soil	MNSFASNLYRDLTCAAAAALITLVFSLSFVQSTSVPPGTHSGASRTVAMQSDHGWFGQPEPAVLVD
Ga0137396_100891832	3300012918	Vadose Zone Soil	MNSFASNLYRDLTCAAAAALITLVFSLSFVQSTSVPPGTHSGASRTVAMQSDHGWFGQPEPAVLVD*
Ga0137419_100973031	3300012925	Vadose Zone Soil	IHRPSTQPKETTMNSFASNLYRDLTCAAAAALITLVFSLSFVQSTSVPPGTHSGASRTVAMQSDHGWFGQPEPAVLVD*
Ga0137407_107140381	3300012930	Vadose Zone Soil	KETTMNSFASNLYRDLTCAAAAALITLVFSLSFVQSTSVPPGMHAGASRTVAMRSDHAWFGQPEPAVLVD*
Ga0137420_10766122	3300015054	Vadose Zone Soil	MNSFASNLYRDLTCAAAAALITLVFSLSFVQSTSVPPGTHSGASRTVAMQSDHAWFGQPEPAVLVD*
Ga0137418_100036373	3300015241	Vadose Zone Soil	XYRDLTCAAAAALITLVFSLSFVQSTSVPPGTHSGASRTVAMQSDHGWFGQPEPAVLVD*
Ga0137418_101126474	3300015241	Vadose Zone Soil	YRDLTCAAAAALITLVFSLSFVQSTSVPPGTHSGASRTVAMQSDHGWFGQPEPAVLVD*
Ga0187824_100478222	3300017927	Freshwater Sediment	MNTTVTTLYRDVTCGAAAALITLILSVAFIQSTSVPPGMHAGTTTHFVALQPQHAWFGQPEPAVLVD
Ga0187824_101033452	3300017927	Freshwater Sediment	MNTFVSTLYRDLTCGAAAVLITLILSAAFVQSTSVPPGMHATSNVFVAMQPQHAWFGQPEPAVLVD
Ga0187825_100791663	3300017930	Freshwater Sediment	MNTFASTLYRDFTCGAAAVLITLILSAAFVQSTSVPPGMHATSNVFIALQPQHAWFGQPEPAVLVD
Ga0187778_100918613	3300017961	Tropical Peatland	MNTFFSTLYRDVACAAAATLITLMLSVSFLESTAVPPGMHTVSDPFVALSPQHAWFGQPEPAVLVD
Ga0187783_100016432	3300017970	Tropical Peatland	MSSYASIALRDLACGAAAALITMLLSVTFVQTTSVPPGTQHATSRFFVALQPEHAWFGQPEPAVLVD
Ga0187783_100118795	3300017970	Tropical Peatland	MNAYISVVLRDLACGAAAAVITLILSVSFVQSTSVPPGTRAASGHVFVALQPEHPWFGQPEPAVLVD
Ga0187783_102579714	3300017970	Tropical Peatland	MNTFAINLYRDVTCGAAAMLITAILSLTFVQSTALPPGMHAPGAAFMAVQPTHAWFGQPEPAVLVD
Ga0187781_107356412	3300017972	Tropical Peatland	MHSYASYALRDLACGAAAVLITLLFSLTFVQSTSVPPETQAHAGRHVFIALQPKHAWFGQPEPAVLVD
Ga0187780_108493952	3300017973	Tropical Peatland	MTRFVSVLYRDLTCAAASVLVTLVLAMSFVESTSVPPGMHAVSDPFVALSPQHAWFGQPEPAVLVD
Ga0187777_100610333	3300017974	Tropical Peatland	MNTFFSTLYRDVTCAAAATLITLMLSVSFLESTAVPPGMHTVSDPFVALSPQHAWFGQPEPAVLVD
Ga0187784_101919392	3300018062	Tropical Peatland	MHSYASYALRDLACGAAAVLITLLFSLTFVQSTSVPPETHAHAGRHVFIALQPKHAWFGQPEPAVLVD
Ga0193751_11622602	3300019888	Soil	MNTFVANLSRNLTCAAAAALISLVAGMSFVQATSVPPGMHAARTSFVARQPEHAWFGQPEPAVLVD
Ga0193733_10012962	3300020022	Soil	MNSFASNLYRDLTCAAAAALITLVLSLSFVQSTSVPPGMHAGASRTVAMQSDHAWFGQPEPAVLVD
Ga0210407_102894232	3300020579	Soil	MNSFASNLYRDLTCAAAAALITLVFSLSFVQSTSVPPGAHAGASRTVAMQSEHAWFGQPEPAVLVD
Ga0210404_101843882	3300021088	Soil	MNSFASNLYRDLTCAAAAALITVVFSLSFVQSTSVPPGMHAGASRTVALQSDHGWFGQPEPAVLVD
Ga0210404_107967542	3300021088	Soil	MNAPFATLYRDLTCAAASVAITLILAGSFVQSTSVPPGTHAKGGVFGALQPAHAWFGQPQPAVLVD
Ga0210405_101079012	3300021171	Soil	MNTFANALYRDLTCGVAAILITAVLAMSFVASTAVAPGTRAPAVRIVGVQPEHAWFGQPEPAVLVD
Ga0213874_100533152	3300021377	Plant Roots	MNSLVTTLTRDVTCAAAAAVISLVMTAAFVQSTSQQPFTHAAAPRVAMQAEHAWFGQPEPAVLVD
Ga0210393_101977923	3300021401	Soil	MNTFANTLYRDLTCGFAAILITAVLGMSFVSSTAVPPGTHAPAVRTVGVQPEHAWFGQPEPAVLVD
Ga0210397_114620841	3300021403	Soil	MNTLATLYRDLTCAAAAAAISVVVSLSFVTSTAVPPGAHAQSERVAVVQPDHAWFGQPEPAVLVD
Ga0210398_100858063	3300021477	Soil	MNTFANTLYRDLTCGFAAILITAVLGMSFVSSTAVPPGTHAPAVRTVGVQPEHAWFGQ
Ga0210409_105732431	3300021559	Soil	MNTFANTLYRDLTCGFAAILITAVLGVSFVSSTAVPPGTHAPAVRTVGVQPEHAWFGQPEPAVLVD
Ga0126371_109532763	3300021560	Tropical Forest Soil	MNTFANTLYRDVMCGAAAMLITAVLSLTFVQSTALPPGMHAAGAAFIAVQPAHAWFGQPEPAVLVD
Ga0242657_11291931	3300022722	Soil	KETTMNTFANTLYRDLTCGFAAILITAVLGMSFVSSTAVPPGTHAPAVRTVGVQPEHAWFGQPEPAVLVD
Ga0247671_10827972	3300024284	Soil	MNTIVTTLYRDVTCGAAAALITLILSVAFIQSTSVPPGMRAATMTHFVALQPQHAWFGQPEPAVLVD
Ga0137417_14244202	3300024330	Vadose Zone Soil	MNSFASNLYRDLTCAAAAALITLVFSLSFVQSTSVPPGMHAGASRTVAMRSDHGWFGQPEPAVLVD
Ga0207663_100522843	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MNTIVTTLYRDVTCGAAAALITLILSVAFIQSTSVPPGMHAGTTTHFVALQPQHAWFGQPEPAVLVD
Ga0207664_119350651	3300025929	Agricultural Soil	MNTYVSLALRDLACGAAAALITLIFSASIVQSTSVPPGMHAAGRHPTHVFTALQPRDAWF
Ga0207665_116745801	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	TTMNSFASNLYRDLTCAAAAALITLVLSLSFVQSTSVPPGVHVGASRTVAMQSDHAWFGQPEPAVLVD
Ga0257151_10044461	3300026341	Soil	MNSFASNLYRDLTCAAAAALITLVFSLSFVQSTSVPPGTHSGASRTVAMQSDHAWFGQPEPAVLVD
Ga0257167_10517471	3300026376	Soil	TQPKETTMNSFASNLYRDLTCAAAAALITLVFSLSFVQSTSVPPGTHAGASRTVAMQSDHGWFGQPEPAVLVD
Ga0208241_10839271	3300027297	Forest Soil	MNTFANTLYRDLTCGVAAILITAVLGMSFVSSTAVPPGTHAAAVRTVGVQPEHAWFGQPEPAVLVD
Ga0209734_10010172	3300027535	Forest Soil	MNSFASNLYRDVTCAAAAALITLVFSLSFVESTAVPPGMHAGASRTVAMQSDHAWFGQPEPAVLVD
Ga0209734_10730061	3300027535	Forest Soil	VATFYRDVSCGAAAILIAVIATLSFVQSTSVPPGMHAARTSFVARQPAHAWFGQPEPAVLVD
Ga0209219_10096272	3300027565	Forest Soil	MNTLVATFYRDVSCGAAAILIAVIATLSFVQSTSVPPGMHAARTSFVARQPAHAWFGQPEPAVLVD
Ga0209219_10962361	3300027565	Forest Soil	MNSFASTLYRDVTCAAAAALITLVFSLSFVQSTSVPPGTHAGTTRTVGLQSDHAWFGQPEPAVLVD
Ga0209116_10192753	3300027590	Forest Soil	MNTLLTTLYRDVACGTGAVLITLLLGLSFVQSTSVPPGMHAHSFVAVQSPHAWFGQPEPAVLVD
Ga0209733_10020826	3300027591	Forest Soil	MNSFASNLYRDLTCAAAAALITLVFSLSFVQSTSVPPGAHAGASRTVAMQSDHGWFGQPEPAVLVD
Ga0209329_10035531	3300027605	Forest Soil	MNSFASNLYRDLTCAAAAALITLVFSLTFVQSTSVPPGTHAGASRSVAMQSDHAWFGQPEPAVLVD
Ga0209117_10474663	3300027645	Forest Soil	MNSFASTLYRDVTCAAAAALITLVFGLSFVQSTSVPPGTHAGTTRAVALQSDHAWFGQPEPAVLVD
Ga0209060_100677661	3300027826	Surface Soil	MNTYVSIALRDLACGTAAALITLILSASFVKSTSAAPGFHPGGSHKTHVFVALQPPDAWFGQPEPAVLVD
Ga0209580_102706463	3300027842	Surface Soil	MNTFVNTLYRDFACGSAAVLITLILSAAFVQATSLPPGMHATSSNVFIALQPQHAWFGQPEPAVLVD
Ga0209274_100021175	3300027853	Soil	MNTFLTTLYRDVACGTAAVLITLLLGLSFVQSTSVPPGMHAHSFVAVQPPHAWFGQPEPAVLVD
Ga0209167_107802112	3300027867	Surface Soil	MNTYVSIALRDLTCGTAAALITLILSASFVKSTSTAPGFHPGGSHKTHVFVALQPPDAWFGQPEPAVLVD
Ga0209579_100342634	3300027869	Surface Soil	MNTYVSIALRDLACGAAAALITLILSAAFVQSTATPPGSHAVGSQTTRVFVALQPRDAWFGQPEPAVLVD
Ga0209579_100734553	3300027869	Surface Soil	MNTYVSIALRDLACGAAAALITLILSAAFVQSTATPPGSHAVGSHATRVFVALQPRDAWFGQPEPAVLVD
Ga0209068_107814032	3300027894	Watersheds	MNSFASTLYRDVTCAAAAALITLVFSAAFVQSTSVAPGTHAGTARVLALQTTHG
Ga0302232_106002542	3300028789	Palsa	MNSFLSTLYRDVTCGAAAALITLIAGLSFVQATALPPGMHADGIAFAAVQPQHAWFGQP
Ga0307504_100004754	3300028792	Soil	MNSFASTLYRDLTCAAAAALITLVFSLSFVQSTSVPPGMHAGASRTVAMQSDHAWFGQPEPAVLVD
Ga0302184_104155052	3300030490	Palsa	MNSFLSTLYRDVTCGAAAALITLIAGLSFVQATALPPGMHADGIAFAAVQPQHAWFGQPEPAVLVD
Ga0311357_104113013	3300030524	Palsa	MNSFLSTLYRDVTCGAAAALITLIAGLSFVQATALPPGMHADGIAFAAVQPQHAWFGQPEPAV
Ga0311356_117387952	3300030617	Palsa	MNSFLSTLYRDVTCGAAAALITLIAGLSFVQATALPPGMHADGIAFAAVQPQHAWFGQPEPAVL
Ga0073997_117487521	3300030997	Soil	MNSFASNLYRDLTCAAAAALITLVFSLSFVQSTSVPPGTHAGASRTVAMQSDHAWFGQPEPAVLVD
Ga0302324_1010335322	3300031236	Palsa	MNSFLTTLYRDVACGTAAVLITLLLGLSFVQSTSVPPGMHAHSFVAVQPPHAWFGQPEPAVLVD
Ga0307476_100265672	3300031715	Hardwood Forest Soil	MNTIANTLYRDLTCGFAAILITAVLGMSFVSSTAVPPGTHAPAVRTVGVQPEHAWFGQPEPAVLVD
Ga0307476_101735653	3300031715	Hardwood Forest Soil	MNTFATTLYRDITCGAAAMLITAILSLTFVQSTALPPGMHATGAVFIAVQPAHAWFGQPEPAVLVD
Ga0307469_110462202	3300031720	Hardwood Forest Soil	MSTVSTLYRDVTCGAAAAVITLILSVAFLQSTSVPPGMHAATGHFVAQQVKHAWFGQPEPAVLVD
Ga0307478_107804242	3300031823	Hardwood Forest Soil	VNTLFVRLYRDLSCAAASVAITLILAGAFVQSTAVPPGRGAHGAVFVALQPEHAWFGQPEPAVLVD
Ga0318519_109526361	3300033290	Soil	MNSLASFYRDLTCAAGAAVISVVASLTFLTSTAVLPGTQAVGATTSIVQPLHAWFGQPEPAVLVD
Ga0316624_100048933	3300033486	Soil	MNAFATLSRDLTCAAAATLITFVAALSFVDSTSVAPGTHAPSARIAAMQPEHAWFGQPEPAVLVD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086786

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences