Metagenome / Metatranscriptome Family F086871

Basic Information
Family ID	F086871
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	39 residues
Representative Sequence	MDLNLTAEELAFRDELRAWLASNVPKDWNEWREKPLEE
Number of Associated Samples	94
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	98.18 %
% of genes from short scaffolds (< 2000 bps)	87.27 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Bacteria (71.818 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.455 % of family members)
Environment Ontology (ENVO)	Unclassified (28.182 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.273 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 0.00% Coil/Unstructured: 66.67%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF13193	AMP-binding_C	66.36
PF13561	adh_short_C2	5.45
PF13673	Acetyltransf_10	3.64
PF13620	CarboxypepD_reg	1.82
PF00593	TonB_dep_Rec	1.82
PF00106	adh_short	0.91
PF03454	MoeA_C	0.91
PF13432	TPR_16	0.91
PF00230	MIP	0.91
PF00583	Acetyltransf_1	0.91
PF13474	SnoaL_3	0.91
PF00378	ECH_1	0.91
PF00107	ADH_zinc_N	0.91
PF00126	HTH_1	0.91
PF14329	DUF4386	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0303	Molybdopterin Mo-transferase (molybdopterin biosynthesis)	Coenzyme transport and metabolism [H]	0.91
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.82 %
Unclassified	root	N/A	28.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.82 %
Unclassified	root	N/A	28.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.82 %
Unclassified	root	N/A	28.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.18 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.27 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	7.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.18 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.73 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.82 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.82 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.91 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.91 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.18 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Pseudonocardia spinosispora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia spinosispora	0.91 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001166\|JGI12694J13545_1009162	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1117	Open in IMG/M
3300001170\|JGI12704J13340_1004796	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1333	Open in IMG/M
3300001593\|JGI12635J15846_10878856	Not Available	512	Open in IMG/M
3300002245\|JGIcombinedJ26739_101510817	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300004080\|Ga0062385_10350447	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300004092\|Ga0062389_102719819	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300005526\|Ga0073909_10188856	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300005537\|Ga0070730_10852180	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005542\|Ga0070732_10764275	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300005563\|Ga0068855_100315353	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1729	Open in IMG/M
3300005575\|Ga0066702_10061041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2059	Open in IMG/M
3300005764\|Ga0066903_107339822	Not Available	570	Open in IMG/M
3300006797\|Ga0066659_10257099	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300009088\|Ga0099830_10270048	Not Available	1351	Open in IMG/M
3300009088\|Ga0099830_11740235	Not Available	520	Open in IMG/M
3300010048\|Ga0126373_12786303	Not Available	546	Open in IMG/M
3300010048\|Ga0126373_13200191	Not Available	510	Open in IMG/M
3300010339\|Ga0074046_10803579	Not Available	550	Open in IMG/M
3300010361\|Ga0126378_13423039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia spinosispora	503	Open in IMG/M
3300010375\|Ga0105239_10287095	All Organisms → cellular organisms → Bacteria	1853	Open in IMG/M
3300010876\|Ga0126361_10600555	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300011269\|Ga0137392_10392376	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300011271\|Ga0137393_10124311	All Organisms → cellular organisms → Bacteria	2132	Open in IMG/M
3300012189\|Ga0137388_11291198	Not Available	669	Open in IMG/M
3300012361\|Ga0137360_11283487	Not Available	633	Open in IMG/M
3300012363\|Ga0137390_10485370	Not Available	1210	Open in IMG/M
3300015053\|Ga0137405_1248081	All Organisms → cellular organisms → Bacteria	2109	Open in IMG/M
3300016294\|Ga0182041_11527151	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300016404\|Ga0182037_10897203	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300017821\|Ga0187812_1041493	Not Available	1562	Open in IMG/M
3300017993\|Ga0187823_10197008	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300018007\|Ga0187805_10177405	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300018047\|Ga0187859_10020272	All Organisms → cellular organisms → Bacteria	3687	Open in IMG/M
3300018062\|Ga0187784_11073332	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300018085\|Ga0187772_10490878	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300018468\|Ga0066662_10939607	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300019789\|Ga0137408_1137109	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300020199\|Ga0179592_10287979	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300020579\|Ga0210407_11441565	Not Available	510	Open in IMG/M
3300020580\|Ga0210403_10307723	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1298	Open in IMG/M
3300020580\|Ga0210403_11008895	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300020581\|Ga0210399_10545381	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300020581\|Ga0210399_10651522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300021046\|Ga0215015_10183544	Not Available	593	Open in IMG/M
3300021088\|Ga0210404_10133224	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1288	Open in IMG/M
3300021403\|Ga0210397_10079608	All Organisms → cellular organisms → Bacteria	2168	Open in IMG/M
3300021405\|Ga0210387_10643498	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300021406\|Ga0210386_11274238	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300021420\|Ga0210394_10603528	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300021420\|Ga0210394_10947938	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300021420\|Ga0210394_11054991	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300021420\|Ga0210394_11477598	Not Available	575	Open in IMG/M
3300021433\|Ga0210391_10151502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1826	Open in IMG/M
3300021478\|Ga0210402_11160040	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300021478\|Ga0210402_11927893	Not Available	517	Open in IMG/M
3300021559\|Ga0210409_10103406	All Organisms → cellular organisms → Bacteria	2627	Open in IMG/M
3300021559\|Ga0210409_10323639	Not Available	1387	Open in IMG/M
3300022533\|Ga0242662_10313141	Not Available	526	Open in IMG/M
3300025612\|Ga0208691_1117187	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300025898\|Ga0207692_10786788	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300025898\|Ga0207692_10887252	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300025905\|Ga0207685_10110560	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300025911\|Ga0207654_10656356	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300025912\|Ga0207707_10533559	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300025912\|Ga0207707_11016010	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300025939\|Ga0207665_10916798	Not Available	695	Open in IMG/M
3300026356\|Ga0257150_1061269	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300026489\|Ga0257160_1089092	Not Available	552	Open in IMG/M
3300026499\|Ga0257181_1035924	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300026551\|Ga0209648_10637777	Not Available	584	Open in IMG/M
3300027034\|Ga0209730_1040388	Not Available	541	Open in IMG/M
3300027567\|Ga0209115_1005491	All Organisms → cellular organisms → Bacteria	2570	Open in IMG/M
3300027635\|Ga0209625_1009244	All Organisms → cellular organisms → Bacteria	2138	Open in IMG/M
3300027643\|Ga0209076_1174908	Not Available	595	Open in IMG/M
3300027651\|Ga0209217_1042597	Not Available	1389	Open in IMG/M
3300027655\|Ga0209388_1032995	Not Available	1485	Open in IMG/M
3300027674\|Ga0209118_1035364	Not Available	1518	Open in IMG/M
3300027676\|Ga0209333_1186162	Not Available	551	Open in IMG/M
3300027842\|Ga0209580_10014509	All Organisms → cellular organisms → Bacteria	3437	Open in IMG/M
3300027857\|Ga0209166_10257321	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300027862\|Ga0209701_10480844	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300027898\|Ga0209067_10194401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1089	Open in IMG/M
3300028775\|Ga0302231_10108476	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300028806\|Ga0302221_10444167	Not Available	565	Open in IMG/M
3300029944\|Ga0311352_10030497	All Organisms → cellular organisms → Bacteria	5110	Open in IMG/M
3300029951\|Ga0311371_10827260	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300029993\|Ga0302304_10126613	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300030503\|Ga0311370_10870718	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300030580\|Ga0311355_10729554	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300030580\|Ga0311355_11013506	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300031057\|Ga0170834_107096014	All Organisms → cellular organisms → Bacteria	1898	Open in IMG/M
3300031708\|Ga0310686_101280647	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300031708\|Ga0310686_108587986	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300031715\|Ga0307476_10172974	Not Available	1559	Open in IMG/M
3300031753\|Ga0307477_10013619	All Organisms → cellular organisms → Bacteria	5555	Open in IMG/M
3300031753\|Ga0307477_10230290	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1285	Open in IMG/M
3300031771\|Ga0318546_10763971	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300031793\|Ga0318548_10165818	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1079	Open in IMG/M
3300031805\|Ga0318497_10055004	All Organisms → cellular organisms → Bacteria	2060	Open in IMG/M
3300031945\|Ga0310913_10808125	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300031954\|Ga0306926_10025046	All Organisms → cellular organisms → Bacteria	6934	Open in IMG/M
3300032060\|Ga0318505_10423270	Not Available	630	Open in IMG/M
3300032261\|Ga0306920_100136129	All Organisms → cellular organisms → Bacteria	3658	Open in IMG/M
3300032770\|Ga0335085_11025836	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300032783\|Ga0335079_10571898	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1196	Open in IMG/M
3300032783\|Ga0335079_10819702	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300032783\|Ga0335079_11232971	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300032805\|Ga0335078_12642202	Not Available	513	Open in IMG/M
3300032828\|Ga0335080_12098856	Not Available	545	Open in IMG/M
3300033289\|Ga0310914_10887966	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.27%
Host-Associated	Host-Associated	2.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.00%
Aquatic	Environmental → Aquatic	7.27%
Plants	Host-Associated → Plants	2.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.73%
Peat	Environmental → Terrestrial → Peat	7.27%
Freshwater	Environmental → Aquatic → Freshwater	6.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.82%
Sediment	Environmental → Aquatic → Sediment	0.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.09%
Loam	Environmental → Terrestrial → Soil → Loam	15.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.18%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.18%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.64%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.73%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.09%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.82%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.91%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300001170	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12694J13545_10091621	3300001166	Forest Soil	MDLNLTSEEMQFRDELRSWLAAHVPSDWAERREESLESRFE
JGI12704J13340_10047961	3300001170	Forest Soil	MDLNLTAEELTFRDELRAWLASNVPKDWSDWREKPMEESFP
JGI12635J15846_108788561	3300001593	Forest Soil	MDLNLTADELQFRDELRSWLTANLPKDWDEWREKPIEVSFPYL
JGIcombinedJ26739_1015108171	3300002245	Forest Soil	MDLKLTPEESSFRDELRAWLATNAPKDWAEWREKPLEE
Ga0062385_103504471	3300004080	Bog Forest Soil	MDLRLTAEESAFRDELRAWLAINVPRDWSEWREKPIEESYPYLRA
Ga0062389_1027198192	3300004092	Bog Forest Soil	MDLNLSTDEQTFQDELRSWLETNVPREWEHAREQSLDVRFEFHR
Ga0073909_101888561	3300005526	Surface Soil	MDLNLSPEEIKFRDELRTWLAANAPKDWDERREESMESRFEYLKRWQR
Ga0070730_108521801	3300005537	Surface Soil	MDLNLSPEEIKFRDELRNWLSANAPKDWDERREESM
Ga0070732_107642751	3300005542	Surface Soil	MDLKLSLEELQFRDELRAWLRANVPRDWGEWREKPIE
Ga0068855_1003153533	3300005563	Corn Rhizosphere	MDLNLSPDEIKFRDELRTWLAANAPTDWDERREES
Ga0066702_100610411	3300005575	Soil	MDLSLSPDEIKFRDVLRTWLAGNAPTDWDERREESMESRFEYLKRWQ
Ga0066903_1073398223	3300005764	Tropical Forest Soil	MDLNLSADELKFRDELRAWLAANVPKDWDEYRDESLEARF
Ga0066659_102570991	3300006797	Soil	MDLKLTAEELKFRDELRAWLKSNVPKDWDEWREETLEARF
Ga0099830_102700481	3300009088	Vadose Zone Soil	MDLNLTTEELSFRDELRAWLVSNVPKDWNEWREKP
Ga0099830_117402351	3300009088	Vadose Zone Soil	MDLNLTLEEKQFRDELRIWLEANVPKDWSEWREKPIEESFTYL
Ga0126373_127863031	3300010048	Tropical Forest Soil	MDLNLTREEVAFRDAFRSWLASNVPNDWSRWREKPLEESFSYL
Ga0126373_132001912	3300010048	Tropical Forest Soil	MDLNLTREEVAFRDEFRSWLASNVPNDWSRWREKPLE
Ga0074046_108035792	3300010339	Bog Forest Soil	MDLNLSSEERQFRDEFRGWLEANVPKDWPEWREKPL
Ga0126378_134230391	3300010361	Tropical Forest Soil	MDLNLSADELKFRDELRAWLAANVPKDWNEHREESLEAR
Ga0105239_102870953	3300010375	Corn Rhizosphere	MDLNLSPDEIKFRDELRTWLSANAPTDWDERREESMESRFEYL
Ga0126361_106005551	3300010876	Boreal Forest Soil	MDLKLTPEESSFRDELRSWLAANAPKDWAEWREKPLEES
Ga0137392_103923762	3300011269	Vadose Zone Soil	MNLNLSPEELQFRDELREWLRANVPRDWSEWREKPIEESFPYLRAW
Ga0137393_101243111	3300011271	Vadose Zone Soil	MDLNLTTEELSFRDELRAWLVSNVPKDWNEWREKPIEE
Ga0137388_112911982	3300012189	Vadose Zone Soil	MDLNLSTEELKFRDELRAWLTANVPRDWDERREESLEVRFDYLK
Ga0137360_112834872	3300012361	Vadose Zone Soil	MNLNLSPEELQFRDELRKWLRANVPRDWSEWREKPIEESF
Ga0137390_104853702	3300012363	Vadose Zone Soil	MDLNLTKEEIAFRDELRAWLKASVPKDWDERRESPM
Ga0137405_12480811	3300015053	Vadose Zone Soil	MDLNLTTEELSFRDELRAWLVSNVPKDWNEWRGVA*
Ga0182041_115271512	3300016294	Soil	MDLNLTPDEAAFRDELRLWLAANVPTDGNTWREKSLEESFP
Ga0182037_108972031	3300016404	Soil	MDLNLNNEEKQFRDELRSWLEANAPKDWAEWRERPL
Ga0187812_10414932	3300017821	Freshwater Sediment	VDLNLTPGERQFRDDLRAWLAVHVPKDWNEWREKPIEVSF
Ga0187823_101970081	3300017993	Freshwater Sediment	MDLNLNAEERQFRDELRAWLEANTPKDWSDWREKPLEESF
Ga0187805_101774052	3300018007	Freshwater Sediment	VDLNLNAEEKQFRDELRAWLSANVPKDWAEWREKPLE
Ga0187859_100202721	3300018047	Peatland	MDLNLTPEELTFRDELRAWLASNVPKDWKEWREKPMEESF
Ga0187784_110733322	3300018062	Tropical Peatland	MDLNLSAEERSFRDEFRTWLEANVPRDWPEWREKPLE
Ga0187772_104908782	3300018085	Tropical Peatland	MDLNLNAEERQFRDELRAWLEMHVPKDWSEWREKPLEESFPYLR
Ga0066662_109396072	3300018468	Grasslands Soil	MDLNLTAGELKFRDELRAWLATNVPKDWEEWREESLEAR
Ga0137408_11371093	3300019789	Vadose Zone Soil	MDLNLSPDEIKFRDELRSWLSANAPTDWDERREESMESRFEYL
Ga0179592_102879791	3300020199	Vadose Zone Soil	MDLNLTAGESAFREELRAWLAANAPKDWNEWREKPLE
Ga0210407_114415651	3300020579	Soil	MDLKLTPEESSFRDELRAWLATNAPKDWAEWREKPLE
Ga0210403_103077232	3300020580	Soil	MDLKLTPEESSFRDELRAWLATNAPKDWAEWREKPL
Ga0210403_110088951	3300020580	Soil	MDLNLTADEKLFRDELRSWLALNAPKDWPAWQNKPLEE
Ga0210399_105453811	3300020581	Soil	MDLKLTAEELAFRDELRAWLASNIPKDWEEWREKPIEES
Ga0210399_106515222	3300020581	Soil	MDLNLTADESAFRDELRAWLASHVPKDWDAWREKPMEESF
Ga0215015_101835441	3300021046	Soil	MDLNLSVEELRFRDELRAWLLANAPRDWSEWPVSY
Ga0210404_101332242	3300021088	Soil	MDLNLTAEELAFRDELRGWLAANAPKDWNEWREKPLEES
Ga0210397_100796081	3300021403	Soil	MDLNLTADELQFRDELRSWLASNVPKDWNEWREKP
Ga0210387_106434982	3300021405	Soil	MDLNLTADEKVFRDELRSWLAANAPKDWPVWQNKP
Ga0210386_112742382	3300021406	Soil	MDLNLTAEELAFRDELRSWLASHVPKDWDEWREKHM
Ga0210394_106035281	3300021420	Soil	MDLNLTAEELAFRDELRSWLASNLPIDWEEWREKPIEESFP
Ga0210394_109479382	3300021420	Soil	MDLNLTSEEMQFRDELRSWLTANVPTDWAERREESLE
Ga0210394_110549912	3300021420	Soil	MDLNLTPDELQFRDELRSWLATNVPKDWNEWREKPI
Ga0210394_114775982	3300021420	Soil	MDLNLNTEEKQFRDELRAWLDANVPKDWAQWREKPLEEVFPYH
Ga0210391_101515021	3300021433	Soil	MDLKLTAEESAFRDEFCAWLTSNVPKDWTEWREKPIEES
Ga0210402_111600401	3300021478	Soil	MDLKLSREELQFRDELRAWLAANLPRDWGEWREKPIEESFSYLR
Ga0210402_119278932	3300021478	Soil	MDLNLTAEELAFRDELRAWLATNVPKDWNEWREKP
Ga0210409_101034061	3300021559	Soil	MDLNLTAEEKAFRDELRAWLASNVPRDWSEWREKPIE
Ga0210409_103236391	3300021559	Soil	MDLNLTTEELSFRDELRAWLVSNVPKDWNEWREKPIEES
Ga0242662_103131411	3300022533	Soil	MDLNLTAEELAFRDELRAWLASNVPKDWNEWREKPLEE
Ga0208691_11171872	3300025612	Peatland	MDLNLTPEELTFRDELRAWLASNVPKDWKEWREKPMEES
Ga0207692_107867882	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MDLNLNPAETKFRDELRAWLTANVPKDWDERREESLE
Ga0207692_108872522	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MDLNLSPDEIKFRDELRSWLAANAPKDWDERREESMESRFEY
Ga0207685_101105603	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MDLNLSPEEIKFRDELRSWLATNAPKDWDERREES
Ga0207654_106563562	3300025911	Corn Rhizosphere	MDLNLSPDEIKFRDELRTWLAANAPSDWDERREESMESRFEYLKRWQRPSTQPA
Ga0207707_105335591	3300025912	Corn Rhizosphere	MDLNLSPDEIKFRDELRTWLAANAPTDWDERREESMESRFEYLK
Ga0207707_110160101	3300025912	Corn Rhizosphere	MDLNLSPDEIKFRDELRTWLAANAPTDWDERREESMESRFEYL
Ga0207665_109167982	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MDLNLSPEEIKFRDELRAWLAANVPKDWDERREESLESRF
Ga0257150_10612691	3300026356	Soil	MDLNLTPDELQFRDELRSWLATNVPKDWNEWREKPIEES
Ga0257160_10890922	3300026489	Soil	MDLNLNAEESAFRDELGAWLASNVPKDWNQWREKP
Ga0257181_10359242	3300026499	Soil	MDLNLAAEESAFRDEFRAWLAANAPKDWNEWCEKPLEESFPYL
Ga0209648_106377773	3300026551	Grasslands Soil	MDLNLSADELKFRDELRAWLAANVPKDWDEHREESLEA
Ga0209730_10403882	3300027034	Forest Soil	MDLNLTAEELAFRDELRAWLAVNVPRDWNEWREKPLEESFPYL
Ga0209115_10054913	3300027567	Forest Soil	MDLNLTKEELSFRDELRAWLANNLPKDWNEWREKP
Ga0209625_10092441	3300027635	Forest Soil	MDLKLTPEESSFRDELRAWLATNAPKDWAEWREKPLEESFPYL
Ga0209076_11749081	3300027643	Vadose Zone Soil	MDLNLTTEELSFRDELRAWLVSNVPKDWNEWREKPIEESFPY
Ga0209217_10425972	3300027651	Forest Soil	MNLNLNAEESTFRDELRLWLASNVPKDWNMWSEKPIEESFAY
Ga0209388_10329951	3300027655	Vadose Zone Soil	MDLNLTTEELSFRDELRAWLVSNVPKDWNEWREKPIEESFP
Ga0209118_10353642	3300027674	Forest Soil	MDLNLTAEEMAFRDELRAWLASNAPKDWNEWREKPLEESF
Ga0209333_11861622	3300027676	Forest Soil	VDLNLTSEEMQFRDELRSWLTANVPTDWAERREES
Ga0209580_100145091	3300027842	Surface Soil	MDLNLSPEEIKFRDELRSWLSANAPTDWDERREESMESRFEYLK
Ga0209166_102573211	3300027857	Surface Soil	MDLNLSPDEIKFRDELRTWLAANAPTDWDERREESMESRFEYLKRWQR
Ga0209701_104808442	3300027862	Vadose Zone Soil	MDLNLTTEELSFRDELRAWLVSNVPKDWNERREKP
Ga0209067_101944011	3300027898	Watersheds	MDLKLTAEELAFRDELRTWLASNVPADWSEGREKP
Ga0302231_101084761	3300028775	Palsa	MDLNLTEQELSFRDELRAWLAANLPKDWSEWREKPI
Ga0302221_104441672	3300028806	Palsa	MDLNLTDEELKFRDELRAWLASNVPKDWKEWREKPM
Ga0311352_100304971	3300029944	Palsa	MDLSLTAEESAFRDQLRAWLASNVPKDWSEWRDKPMEES
Ga0311371_108272602	3300029951	Palsa	MDLNLTPDEKQFRDELRTWLAANTPKDWPEWQNKPLEESYPYL
Ga0302304_101266131	3300029993	Palsa	MDLNLTDEELKFRDELRAWLASNVPKDWKEWREKPMEES
Ga0311370_108707182	3300030503	Palsa	MDLNLTADEKLFRDELRSWLAANAPKDWPAWQNKPLEESYPY
Ga0311355_107295542	3300030580	Palsa	VDLNLTSDEMQFRDELRSWLTANVPADWAERREES
Ga0311355_110135062	3300030580	Palsa	MDLNLTDEELKFRDELRAWLASNVPKDWKEWREKPMEESFP
Ga0170834_1070960141	3300031057	Forest Soil	MDLNLTPDEAAFRDELRPWLAANVPKDWSTWREKPLEES
Ga0310686_1012806472	3300031708	Soil	MDLNLTPDELQFRDELRSWLATNVPKDWNEWREKPIE
Ga0310686_1085879863	3300031708	Soil	MDLNLTAEELTFRDELRAWLASNVPKDWAEWREKPIE
Ga0307476_101729742	3300031715	Hardwood Forest Soil	MDLNLTPEETKFRDELRTWLEANVPKDWGEWREKPLEESFP
Ga0307477_100136191	3300031753	Hardwood Forest Soil	MDLNLTGEEVAFRDEFRSWLGINAPKDWSSWREKPLEESFA
Ga0307477_102302902	3300031753	Hardwood Forest Soil	MDLKLSLEELQFREELRAWLGANLPRDWGEWREKPIEESFP
Ga0318546_107639712	3300031771	Soil	MDLNLTRDEVAFRDELRSWLAANVPEDWSSWREKPLEE
Ga0318548_101658182	3300031793	Soil	MDLNLTREEVAFRDEFRSWLASNVPNDWRRWREKPLEES
Ga0318497_100550043	3300031805	Soil	MDLNLTREEVAFRDEFRSWLASNVPNDWSRWREKPLEE
Ga0310913_108081251	3300031945	Soil	MDLNLTREEAAFRDEFRSWLATNVPRDWSAWREKPLEESF
Ga0306926_100250461	3300031954	Soil	MDLNLTREETAFRDELRAWLAGNVPKDWSSWREKPLAVSFPYLR
Ga0318505_104232702	3300032060	Soil	MDLTLNDEEKEFRNELRAWLEANAPNDWAEWREKPLEESFPYLR
Ga0306920_1001361291	3300032261	Soil	MDLNLSADELKFRDELRAWLAANVPKDWNEHREESLEV
Ga0335085_110258361	3300032770	Soil	MDLNLTTEEKQFRDELRAWLEANVPKDWGEWREKP
Ga0335079_105718982	3300032783	Soil	MDLNLSAEEREFRDEFRGWLEANVPKDWPVWREKPLEESF
Ga0335079_108197022	3300032783	Soil	MDLNLSPDELKFRDELRAWLETNVPREWDEAREESLD
Ga0335079_112329711	3300032783	Soil	MDLNLNAEERQFRDELRAWLEANTPKDWSDWREKPLE
Ga0335078_126422022	3300032805	Soil	MDLNLNAEELAFRGELRAWLEANVPKDWREWREKPLEE
Ga0335080_120988562	3300032828	Soil	MDLNLNAEERQFRDELRAWLEANTPKDWSDWREKPLEES
Ga0310914_108879662	3300033289	Soil	MDLKLTTEELAFRNELRAWLEANIPTDWSEWREKPLDESF

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086871

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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