Metagenome / Metatranscriptome Family F086885

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086885
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	104 residues
Representative Sequence	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLDEGGGGRP
Number of Associated Samples	79
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.82 %
% of genes near scaffold ends (potentially truncated)	33.64 %
% of genes from short scaffolds (< 2000 bps)	60.00 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.000 % of family members)
Environment Ontology (ENVO)	Unclassified (59.091 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.909 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.36% β-sheet: 28.47% Coil/Unstructured: 48.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.144.1.6: APH phosphotransferases	d1nd4a_	1nd4	0.6508
d.144.1.0: automated matches	d4h05a1	4h05	0.63723
d.144.1.6: APH phosphotransferases	d2pula_	2pul	0.62353
d.144.1.0: automated matches	d6fuca_	6fuc	0.61156
d.144.1.0: automated matches	d4feva_	4fev	0.61026

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00664	ABC_membrane	34.55
PF02836	Glyco_hydro_2_C	8.18
PF00535	Glycos_transf_2	7.27
PF01636	APH	3.64
PF13641	Glyco_tranf_2_3	2.73
PF04185	Phosphoesterase	1.82
PF00072	Response_reg	0.91
PF00588	SpoU_methylase	0.91
PF08443	RimK	0.91
PF10282	Lactonase	0.91
PF13506	Glyco_transf_21	0.91
PF04794	YdjC	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	8.18
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	1.82
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	0.91
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	0.91
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.91
COG3394	Chitooligosaccharide deacetylase ChbG, YdjC/CelG family	Carbohydrate transport and metabolism [G]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	10.91 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	8.18 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.73 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	8.18 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	8.18 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.82 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	8.18 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	8.18 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	8.18 %
Micromonospora rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora rhizosphaerae	1.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10001250	All Organisms → cellular organisms → Bacteria	7959	Open in IMG/M
3300002560\|JGI25383J37093_10002721	All Organisms → cellular organisms → Bacteria	5254	Open in IMG/M
3300002560\|JGI25383J37093_10064031	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300002561\|JGI25384J37096_10008541	All Organisms → cellular organisms → Bacteria	3844	Open in IMG/M
3300002561\|JGI25384J37096_10036596	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300002562\|JGI25382J37095_10047390	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300002908\|JGI25382J43887_10004774	All Organisms → cellular organisms → Bacteria	6379	Open in IMG/M
3300002908\|JGI25382J43887_10239894	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300005166\|Ga0066674_10004038	All Organisms → cellular organisms → Bacteria	5602	Open in IMG/M
3300005166\|Ga0066674_10010784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3772	Open in IMG/M
3300005167\|Ga0066672_10150680	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300005172\|Ga0066683_10196618	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300005172\|Ga0066683_10307044	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300005174\|Ga0066680_10178660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1336	Open in IMG/M
3300005178\|Ga0066688_10255307	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300005180\|Ga0066685_10124458	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300005181\|Ga0066678_10012174	All Organisms → cellular organisms → Bacteria	4241	Open in IMG/M
3300005186\|Ga0066676_10616104	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005446\|Ga0066686_10432862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	899	Open in IMG/M
3300005450\|Ga0066682_10050840	All Organisms → cellular organisms → Bacteria	2512	Open in IMG/M
3300005450\|Ga0066682_10149240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1488	Open in IMG/M
3300005553\|Ga0066695_10568391	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005556\|Ga0066707_10058963	All Organisms → cellular organisms → Bacteria	2252	Open in IMG/M
3300005586\|Ga0066691_10498620	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300006796\|Ga0066665_10663060	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300009012\|Ga0066710_100001656	All Organisms → cellular organisms → Bacteria	17002	Open in IMG/M
3300009090\|Ga0099827_10600553	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300009137\|Ga0066709_100047926	All Organisms → cellular organisms → Bacteria	4785	Open in IMG/M
3300010126\|Ga0127482_1014218	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300010301\|Ga0134070_10034956	All Organisms → cellular organisms → Bacteria	1670	Open in IMG/M
3300010301\|Ga0134070_10124979	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300010323\|Ga0134086_10110653	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300010323\|Ga0134086_10270665	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300010323\|Ga0134086_10312466	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300010329\|Ga0134111_10018586	All Organisms → cellular organisms → Bacteria	2316	Open in IMG/M
3300010329\|Ga0134111_10186485	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300010333\|Ga0134080_10016713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2684	Open in IMG/M
3300010336\|Ga0134071_10034682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2223	Open in IMG/M
3300010336\|Ga0134071_10394639	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300010336\|Ga0134071_10667527	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300010337\|Ga0134062_10026995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2237	Open in IMG/M
3300012198\|Ga0137364_10567610	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300012198\|Ga0137364_11347497	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300012201\|Ga0137365_10002943	All Organisms → cellular organisms → Bacteria	13533	Open in IMG/M
3300012201\|Ga0137365_10868963	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300012204\|Ga0137374_10009729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora rhizosphaerae	11337	Open in IMG/M
3300012204\|Ga0137374_10212691	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300012204\|Ga0137374_10552708	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300012206\|Ga0137380_10006990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora rhizosphaerae	10086	Open in IMG/M
3300012206\|Ga0137380_10122457	All Organisms → cellular organisms → Bacteria	2376	Open in IMG/M
3300012206\|Ga0137380_10558185	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300012207\|Ga0137381_10101937	All Organisms → cellular organisms → Bacteria	2435	Open in IMG/M
3300012208\|Ga0137376_10314186	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300012209\|Ga0137379_10204226	All Organisms → cellular organisms → Bacteria	1889	Open in IMG/M
3300012210\|Ga0137378_11766381	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300012349\|Ga0137387_10033238	All Organisms → cellular organisms → Bacteria	3346	Open in IMG/M
3300012349\|Ga0137387_10728549	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	717	Open in IMG/M
3300012350\|Ga0137372_10415546	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300012351\|Ga0137386_10523295	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	854	Open in IMG/M
3300012353\|Ga0137367_10502884	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300012354\|Ga0137366_10166222	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300012355\|Ga0137369_10017360	All Organisms → cellular organisms → Bacteria	6879	Open in IMG/M
3300012355\|Ga0137369_10385305	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300012355\|Ga0137369_10626877	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300012357\|Ga0137384_10430539	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300012358\|Ga0137368_10054598	All Organisms → cellular organisms → Bacteria	3356	Open in IMG/M
3300012358\|Ga0137368_10201057	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300012359\|Ga0137385_10037642	All Organisms → cellular organisms → Bacteria	4335	Open in IMG/M
3300012359\|Ga0137385_10074111	All Organisms → cellular organisms → Bacteria → Proteobacteria	3026	Open in IMG/M
3300012929\|Ga0137404_12344969	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300012930\|Ga0137407_10202713	All Organisms → cellular organisms → Bacteria	1780	Open in IMG/M
3300012972\|Ga0134077_10066323	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300012976\|Ga0134076_10034026	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300014154\|Ga0134075_10032469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2124	Open in IMG/M
3300015264\|Ga0137403_11624030	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300015358\|Ga0134089_10004339	All Organisms → cellular organisms → Bacteria	4215	Open in IMG/M
3300015359\|Ga0134085_10110231	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300015359\|Ga0134085_10555420	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300017654\|Ga0134069_1088397	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300017657\|Ga0134074_1014940	All Organisms → cellular organisms → Bacteria	2530	Open in IMG/M
3300017659\|Ga0134083_10008957	All Organisms → cellular organisms → Bacteria	3304	Open in IMG/M
3300017997\|Ga0184610_1110513	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300018071\|Ga0184618_10000049	All Organisms → cellular organisms → Bacteria	27227	Open in IMG/M
3300018071\|Ga0184618_10017523	All Organisms → cellular organisms → Bacteria	2293	Open in IMG/M
3300018071\|Ga0184618_10060469	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300018071\|Ga0184618_10154585	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300018431\|Ga0066655_10001567	All Organisms → cellular organisms → Bacteria	8273	Open in IMG/M
3300018433\|Ga0066667_10005212	All Organisms → cellular organisms → Bacteria	5625	Open in IMG/M
3300019255\|Ga0184643_1212032	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300019255\|Ga0184643_1488455	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300021080\|Ga0210382_10032535	All Organisms → cellular organisms → Bacteria	1969	Open in IMG/M
3300021080\|Ga0210382_10482379	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300022534\|Ga0224452_1006067	All Organisms → cellular organisms → Bacteria	2980	Open in IMG/M
3300026296\|Ga0209235_1019543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3635	Open in IMG/M
3300026297\|Ga0209237_1012409	All Organisms → cellular organisms → Bacteria	5042	Open in IMG/M
3300026310\|Ga0209239_1008633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5535	Open in IMG/M
3300026313\|Ga0209761_1012383	All Organisms → cellular organisms → Bacteria	5525	Open in IMG/M
3300026314\|Ga0209268_1180732	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300026328\|Ga0209802_1030969	All Organisms → cellular organisms → Bacteria	2810	Open in IMG/M
3300026329\|Ga0209375_1022953	All Organisms → cellular organisms → Bacteria	3536	Open in IMG/M
3300026329\|Ga0209375_1147948	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300026333\|Ga0209158_1002136	All Organisms → cellular organisms → Bacteria	12473	Open in IMG/M
3300026524\|Ga0209690_1014622	All Organisms → cellular organisms → Bacteria	4092	Open in IMG/M
3300026537\|Ga0209157_1092498	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300026538\|Ga0209056_10013709	All Organisms → cellular organisms → Bacteria	8122	Open in IMG/M
3300026538\|Ga0209056_10173682	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300027748\|Ga0209689_1013217	All Organisms → cellular organisms → Bacteria	5348	Open in IMG/M
3300027882\|Ga0209590_10340847	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300028784\|Ga0307282_10467243	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300028814\|Ga0307302_10512426	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.91%
Aquatic	Environmental → Aquatic	9.09%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.91%
Sediment	Environmental → Aquatic → Sediment	5.45%
Freshwater	Environmental → Aquatic → Freshwater	3.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	39.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.64%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	24.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	20.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	14.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.55%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010126	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100012502	3300002558	Grasslands Soil	MGMVLWGKLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLDEGGGGRP*
JGI25383J37093_100027214	3300002560	Grasslands Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLXRENGTATYRLVGAGPGGTPIXARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLDEGGGGRP*
JGI25383J37093_100640311	3300002560	Grasslands Soil	MGMVLWGKLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGMTRARVVRTIYEKMLSRLPIRASRYYGFRAEXPGFAWVFLEEGGGGRP*
JGI25384J37096_100085412	3300002561	Grasslands Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLRRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPAFAWVFLDEGGGDRP*
JGI25384J37096_100365962	3300002561	Grasslands Soil	MGMVLWGKLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGMTRARVVRTIYEKMLSRLPIRMSRYYGFRAEGPGFAWVFLEEGGGGRP*
JGI25382J37095_100473901	3300002562	Grasslands Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLRRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFR
JGI25382J43887_100047743	3300002908	Grasslands Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLRRENGTATYRLVGAGPGGTPIXARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPAFAWVFLDEGGGDRP*
JGI25382J43887_102398942	3300002908	Grasslands Soil	MGMVLWGKLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGMTRARVVRTIYEKMLSRLPIRASRYYGFRAEGPGFAWVFLEEGGGGRP*
Ga0066674_100040382	3300005166	Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLDEGGGGRP*
Ga0066674_100107842	3300005166	Soil	MGMVLWGNLSWHPAAEAWRQVAPTAPAPESIEVLHRENGTGTYRLVGVGPRGTPIIARRSGMTKAVILRTLYSKILSRLPISARRYCAFRAEPPGFAWVFLEECGGGRP*
Ga0066672_101506801	3300005167	Soil	LVMGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLRRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPAFAWVFLDEGGGDRP*
Ga0066683_101966182	3300005172	Soil	MGMVLLGNLSWHPAAVAWREVAPTAPTPESIEVLRRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAF
Ga0066683_103070442	3300005172	Soil	MGMVLWGNLSWHPAAAAWRQVAPTAPTPDCIEVLRRENGTATYRLVGAGPGGTPIIARRARTAKALILRTLYSKMLSRLPIAAARYCAFRAESPGFAWVFLEE
Ga0066680_101786602	3300005174	Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLRRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPAFAWVFLDEGGGGRP*
Ga0066688_102553072	3300005178	Soil	HPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPAFAWVFLDEGGGDRP*
Ga0066685_101244582	3300005180	Soil	WHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLDEGGGGRP*
Ga0066678_100121742	3300005181	Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLRRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLDEGGGGRP*
Ga0066676_106161042	3300005186	Soil	MSMVLWGNLSWHPAAEAWRQVAPTAPAPESIEVLHRENGTGTYRLVGVGTGGTPIIARRSGITKAVILRTLYSKILSRLPISAPRYCAFRAEPPGFAWVFLEECGGGRP*
Ga0066686_104328622	3300005446	Soil	MGMVLWGNLSWHPAAAAWRQVAPTAPTPDCIEVLRRENGTATYRLVGAGPGGTPIIARRARIAKALILRTLYSKMLSRLPIAAARYCAFRAESPGFAWVFLEECGGGRP*
Ga0066682_100508402	3300005450	Soil	MGMVLWGNLSWHPAAEAWRQVAPTAPAPESIEVLHRENGTGTYRLVGVGPGGTPIIARRSGITKAVILRTLYSKILSRLPISAPRYCAFRAEPPGFAWVFLEECGGGRP*
Ga0066682_101492402	3300005450	Soil	MGMVLWGNLSWHPAADAWRQVAPAAPTPECIEVLHRENGTATYRLVGAGPRGTPIIARRSGITKALILRALYSKMLSRLPIAAPRYCAFRAESSGFAWVFLEECRGGRA*
Ga0066695_105683911	3300005553	Soil	MGMVLWGNLSWHPAAAAWRQVAPTAPTPDCIEVLRRENGTATYRLVGAGPGGTPIIARRARTAKALILRTLYSKMLSRLPIAAARYCAFRAESPGFAWVFLEECGGGRP*
Ga0066707_100589631	3300005556	Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAF
Ga0066691_104986201	3300005586	Soil	AWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPAFAWVFLDEGGGDRP*
Ga0066665_106630602	3300006796	Soil	MGMVLLGNLSWHPAAVAWREVAPTAPTPESIEVLRRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFL
Ga0066710_1000016562	3300009012	Grasslands Soil	MGMVLWGNLSWHPAAAAWRQVAPTAPTPDCIEVLRRENGTATYRLVGAGPGGTPIIARRARIAKALILRTLYSKMLSRLPIAAPRYCAFRAESPGFAWVFLEECGGGRP
Ga0099827_106005532	3300009090	Vadose Zone Soil	AWREVAPTAPTPECIEVLRRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLDEGGGGRP*
Ga0066709_1000479263	3300009137	Grasslands Soil	MGMVLWGNLSWHPAAAAWRQVAPTAPTPDCIEVLRRENGTATYRLVGAGPGGTPIIARRARIAKALILRTLYSKMLSRLPIAAPRYCAFRAESPGFAWLFLEECGGGRP*
Ga0127482_10142181	3300010126	Grasslands Soil	MGMMLWGNLSWHPAAEAWRQVAPTAPAPESIEVLHRENGTGTYRLVGVGPGGTPIIARRSGITKAVILRTLYSKILSRLPIPAPRYCAFRAEPPGFAWVFLEECGGGRP*
Ga0134070_100349562	3300010301	Grasslands Soil	MSMVLWGNLSWHPAAEAWRQVAPTAPAPESIEVLHRENGTGTYRLVGVGPRGTPIIARRSGMTKAVILRTLYSKILSRLPISARRYCAFRAEPPGFAWVCLEECGGGRP*
Ga0134070_101249791	3300010301	Grasslands Soil	MRMVLWGNLSWHPAADAWRQVAPAAPAPESIEVLHRENGTATYRLVGAGPGGTPIIARRSGITKALILRTLYSKMLSRLPIPAPRYCAFRAEPPGFAWLFLEERGDGG
Ga0134086_101106531	3300010323	Grasslands Soil	APAPESIEVLHRENGTGTYRLVGVGPGGTPIIARRSGITKAVILRTLYSKILSRLPISARRYCAFRAEPPGFAWVFLEECGGGRP*
Ga0134086_102706651	3300010323	Grasslands Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGMTRARVVRTIYEKMLSRLPIRASRYYGFRPEGPGFAWVFLEEGGGGRP*
Ga0134086_103124662	3300010323	Grasslands Soil	APTPDCIEVLRRENGTATYRLVGAGPGGTPIIARRARTAKALILRTLYSKMLSRLPIAAARYCAFRAESPGFAWVFLEECGGGRP*
Ga0134111_100185862	3300010329	Grasslands Soil	APTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGMTRARVVRTIYEKMLSRLPIRASRYYGFRPEGPGFAWVFLEEGGGGRP*
Ga0134111_101864852	3300010329	Grasslands Soil	MGMVLWGNLSWHPAAEAWRQVAPTAPAPESIEVLHRENGTGTYRLVGVGTGGTPIIARRSGITKAVILRTLYSKILSRLPISAPRYCAFRAEPPGFAWVFLEECGGGRP*
Ga0134080_100167132	3300010333	Grasslands Soil	MSMVLWGNLSWHPAAEAWRQVAPTAPAPESIEVLHRENGTGTYRLVGVGPRGTPIIARRSGMTKAVILRTLYSKILSRLPISARRYCAFRAEPPGFAWVFLEECGGGRP*
Ga0134071_100346822	3300010336	Grasslands Soil	MGMVLLGNLSWHPAAVAWREVAPTAPTPESIEVLRRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLDEGGGGRP*
Ga0134071_103946392	3300010336	Grasslands Soil	MGIVLLGNLSWHPAAAAWRAVAPTAPAPERIEVLRRENGTAVYRLVGAGPGGTPIIARRSGMTSARVVRTIYEKMLSRLPIRAPRYYGFRAEAPGFAWVFLEEAGGSREG*
Ga0134071_106675271	3300010336	Grasslands Soil	VIRVLWGNLSWHPAAAAWRQVAPTAPTPDCIEVLRRENGTATYRLVGAGPGGTPIIARRARIAKALILRTLYSKMLSRLPIAAPRYCAFRAESPGFAWVFLEECGGGRP*
Ga0134062_100269952	3300010337	Grasslands Soil	MRMVLWGNLSWHPAADAWRQVAPAAPAPESIEVLHRENGTATYRLVGAGPGGTPIIARRSGITKALILRTLYSKMLSRLPIPAPRYCAFRAEPSGFAWLFLQELGDGGP*
Ga0137364_105676102	3300012198	Vadose Zone Soil	MGMVLWGNLSWHPAAEAWRQVAPTAPTPESIEVLHRENGTGTYRLVGAGPGGTPIIARRSGITKARILRTLYSRILSRLPIPARRYCAFRAEPPGFAWVFLEERGDGGP*
Ga0137364_113474971	3300012198	Vadose Zone Soil	MGMMLWGNLSWHPAAEAWRQVAPTAPAPESIEVLHRENGTGTYRLVGVGPGGTPIIARRSGMTKAVILRTLYSKILSRLPIPAPRYCAFRAEPPGFAWLFLEERGDGRP*
Ga0137365_1000294310	3300012201	Vadose Zone Soil	MRMVLWGNLSWHPAVDAWRQVAPAAPAPEYIEVLHRENGTATYRLVGAGPGGTPIIARRSRITKALILRTLYSKMLSRLPIAAPRYCAFRAEPPGFAWVFLQEFGGGRP*
Ga0137365_108689631	3300012201	Vadose Zone Soil	MGMVLWGNLSWHPAADAWRQVAPAAPTPECIEVLHRENGTAIYRLVGAGPGGTPIIARRSGIAKALILRTLYSKMVSRLPIAALRYCAFRADSPGYAWVFLEELGGGRP*
Ga0137374_100097298	3300012204	Vadose Zone Soil	MPMVLWGHLAWHPAAAAWRDVAPTAPAPECIEVLRQENGTAVYRLIGVGPGGAPILARRSRIARALVERILYQQIVPRLPVTAPRYHAFRAAGPGLAWVFLQESGDGG*
Ga0137374_102126912	3300012204	Vadose Zone Soil	MGMVLWGNLSWHPAADAWRQVAPTAPAPESIEVLRRENGTATYRLVGAGPRGTPIIARRSRITKALILRTLYSKMLSRLPIAAPRFCAFRAEPPGYAWVFLEELGGGRP*
Ga0137374_105527081	3300012204	Vadose Zone Soil	MGMVLWGNLSWHPAAAAWREVAPTAPVPERIEVLRRKNGTASYRLVGAGPGGTPIIARRSGKAMALVLRTLYEKMLSRLPIAAPRYCAFR
Ga0137380_100069907	3300012206	Vadose Zone Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYETMLSRLPIAAPRYCAFRADGPGFAWVFLDEGGGGRP*
Ga0137380_101224572	3300012206	Vadose Zone Soil	MGMVLWGNLAWHPAAAAWRAVAPTAPAPECIEVLRQENGTATYRLVGAGPKGRPVLARRTRIGRVRMERTLYERILSRLRPTAPRHYAFPPDEPGFAWVFRQEGQNGHDGTGDE*
Ga0137380_105581852	3300012206	Vadose Zone Soil	MGMVLWGNLSWHPAAAAWRAVAPTAPAPERIEVLRRENGAAVYRLVGAGPGGTPIIARRSGMTSARVVRTIYEKMLSRLPIRAPRYYGFRAEAPGVAWVFLEEAGGSREG*
Ga0137381_101019372	3300012207	Vadose Zone Soil	MGMVLWGNLAWHPAAAAWRAVAPTAPAPECIEVLRQENGTATYRLVGAGPKGRPVLARRTRIGRVRMERTLYERILSRLRPTAPRHYAFPPHEPGFAWVFRQEGQDGHDGTGDE*
Ga0137376_103141862	3300012208	Vadose Zone Soil	MGMMLWGNLSWHPAAEAWRQVAPTAPAPESIEVLHRENGTGTYRLVGVGPGGTPIIARRSGITKAVILRTLYSKILSRLPIPAPRYCAFRAEPPGFAWLFLEERGDGGP*
Ga0137379_102042262	3300012209	Vadose Zone Soil	MGMVLWGNLAWHPAAAAWRAVAPTAPAPECIEVLRQENGTATYRLVGAGPKGRPVLARRTRIGRVRMERTLYERILSRLRPTAPRHYAFPPDEPSFAWVFRQEGQDGHDGTGDE*
Ga0137378_117663811	3300012210	Vadose Zone Soil	MGMVLLGNLSWHPAAVAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLDEGGGGRP*
Ga0137387_100332382	3300012349	Vadose Zone Soil	MGMVLWGNLSWHPAAAAWRAVAPTAPAPECIEVLRQENGTATYRLVGAGPKGRPVLARRTRIGRVRMERTLYERILSRLRPTAPRHYAFPPHEPGFAWVFRQEGQDGHDGTGDE*
Ga0137387_107285492	3300012349	Vadose Zone Soil	MGMVLLGNLSWHPAAVAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLEEAGGSRGG*
Ga0137372_104155461	3300012350	Vadose Zone Soil	MRMVLWGNLSWHPAADAWRQVAPAAPAPEYIEVLHRENGTAIYRLVGAGPGGTPIIARRSGIAKALILRTLYSKMVSRLPIAALRYCAFRADSPGYAW
Ga0137386_105232951	3300012351	Vadose Zone Soil	MGMVLLGNLSWHPAAVAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLDEAGGSRGG*
Ga0137367_105028842	3300012353	Vadose Zone Soil	MPMVLWGHLAWHPAAAAWRDVAPTAPAPECIEVLRQENGTAVYRLIGVGPGGAPILARRSRIARALVERILYQQIVPRLPVTAPRYHAFRAAGPGLAWVFLQES
Ga0137366_101662222	3300012354	Vadose Zone Soil	MGMVLWGNLSWHPAADAWRQVAPAAPTPECIEVLHRENGTAIYRLVGAGPGGTPIIARRSGIAKALILRTLYSKMVSRLPIAALRYCAFRADSPGYAWVFLEELGGERP*
Ga0137369_100173602	3300012355	Vadose Zone Soil	MPMVLWGHLAWHPAAAAWRDVAPTAPAPECIEVLRQGNGTAVYRLIGVGPGGAPILARRSRIARALAERILYQQIVPRLPVTAPRYHAFRAAGPGLAWVFLQESGDGG*
Ga0137369_103853052	3300012355	Vadose Zone Soil	MGMMLWGNLSWHPAADAWRQVAPTAPAPESIEVLRRENGTATYRLVGAGPRGTPIIARRSRITKALILRTLYSKMLSRLPIAAPRFCAFRAEPPGYAWVFLEELGGGRP*
Ga0137369_106268772	3300012355	Vadose Zone Soil	QVAPAAPAPESIEVLHRENGTATYRLVGAGPGGTPIIARRSGITKALILRTLYSKMLSRLPIAAPRYCSLRAESPGFAWGFLEECGGGRP*
Ga0137384_104305391	3300012357	Vadose Zone Soil	LWGNLAWHPAAAAWRAVAPTAPAPECIEVLRQENGTATYRLVGAGPKGRPVLARRTRIGRVRMERTLYERILSRLRPTAPRHYAFPPDEPGFAWVFRQEGQDGHDGTGDE*
Ga0137368_100545982	3300012358	Vadose Zone Soil	MPMVLWGHLAWHPAAAAWRDVAPTAPAPECIEVLRQENGTAVYRLIGVGPGGAPILARRSRIARALAERILYQQIVPRLPVTAPRYHAFRAAGPGLAWVFLQESGDGG*
Ga0137368_102010572	3300012358	Vadose Zone Soil	MWMVLWGNLSWHPAAAAWRQVAPTAPTPDCIEVLRRENGTATYRLVGAGPGGTPIIARRARTAKALILRTLYSKMLSRLPIAAPRYCAFRAESPGFAWLFLEECGGGRP*
Ga0137385_100376423	3300012359	Vadose Zone Soil	MGMVLWGNLSWHRAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLEEAGGSRGG*
Ga0137385_100741112	3300012359	Vadose Zone Soil	MGMVLWGNLSWHPAAAAWRAVAPTAPAPERIEVLRQENGTATYRLVGAGPKGRPVLARRSRIGRVRMERTLYEQILSRLRPTAPRHYAFPPDEPSFAWVFRQEGQDGHDGTGDE*
Ga0137404_123449692	3300012929	Vadose Zone Soil	APESIEVLHRENGTATYRLVGAGPGGTPIIARRSGITKAVILRTLYSKILSRLPIPAARYCAFRAEPPGFAWVFLEERGGAGP*
Ga0137407_102027132	3300012930	Vadose Zone Soil	MVLWGNLAWHPAAKAWQQVAPTAPGPESIEVLHRENGTGTYRLVGAGPSGTPIIARRSGITKAVILRTLYSKILSRLPIPAARYCAFRAEPPGFAWVFLEERGGAGP*
Ga0134077_100663232	3300012972	Grasslands Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGMTRARVVRTIYEKMLSRLPIRAPRYYGFRAEAPGFAWVFLEEAGGSREG*
Ga0134076_100340262	3300012976	Grasslands Soil	MGMVLLGNLSWHPAAVAWREVAPTAPTPESIEVLRRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFR
Ga0134075_100324692	3300014154	Grasslands Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGMTRARVVRTIYEKMLSRLPIRASRYYGFRAEGPGFAWVFLEEGGGGRP*
Ga0137403_116240302	3300015264	Vadose Zone Soil	APESIEVLHRENGTATYRLVGAGPGGTPIIARRSRITKALILRTLYAKMLSLLPIAAPRYRAYRAEPPGFAWVFLEERGGAGP*
Ga0134089_100043391	3300015358	Grasslands Soil	MGMVLWGKLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGMTRACVVRTIYEKMLSRLPIRASRYYGFRAEGP
Ga0134085_101102312	3300015359	Grasslands Soil	MGMVLWGNLSWHPAAEAWRQVAPTAPAPESIEVLHRENGTGTYRLVGVGPGGTPIIARRSGITKAVILRTLYSKILSRLPIPAPRYCAFRAEPPGFAWLFLEERGDGGP*
Ga0134085_105554201	3300015359	Grasslands Soil	SWHPAADAWRQVAPAAPAPESIEVLHRENGTATYRLVGAGPGGTPIIARRSGITKALILRTLYSKMLSRLPIPAPRYCAFRAEPPGFGWVFLEERGDGGR*
Ga0134069_10883972	3300017654	Grasslands Soil	MGMMLWGNLSWHPAAEAWRQVAPTAPAPESIEVLHRENGTGTYRLVGVGPGGTPIIARRSGITKAVILRTLYSKILSRLPIPAPRYCAFRAEPPGFAWLFLEERGDGGP
Ga0134074_10149401	3300017657	Grasslands Soil	MGMVLWGNLSWHPAAEAWRQVAPTAPAPESIDVLHRENGTGTYRLVGVGPRGTPIIARRSGMTKAVILRTLYSKILSRLPISARRYCAF
Ga0134083_100089573	3300017659	Grasslands Soil	AAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLDEGGGGRP
Ga0184610_11105132	3300017997	Groundwater Sediment	MGMILWGNLAWHPAAAAWRAVTPTAPTPDCIEVLRADHGNAVYRLVGAGPSGAPIIARRSGKARALIARALYEKLLSRLPITAPRYCAFSAEDPEHAWVFLEER
Ga0184618_100000492	3300018071	Groundwater Sediment	MGRVLWGNLAWHPAAAAWRAVAPTAPTPDCIEILHADNGNAVYRLVGAGSSGAPIIARRSGKARALIVRTLYEKMLSRLPLTLPRYRAFRVEGPEYAWVFLEER
Ga0184618_100175232	3300018071	Groundwater Sediment	MRMVLWGNLSWHPAAAAWREVAPTAPTPDCIEVLRRENGTGTYRLVGAGPGGTPIIARRSGIAKALILRTLYSKMLSRLPIAAPRYCAFRAESLRCAWLFLEERGGGRP
Ga0184618_100604692	3300018071	Groundwater Sediment	MGMVLWGNLSWHPAADAWRQVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGIAKAVILRTLYSKLLSRLPIAAPRYCAFRAESPQFAWVFLEECGGGRP
Ga0184618_101545852	3300018071	Groundwater Sediment	MGRVLWGNLSWHPAADAWRQVAPAAPTPESIEVLHHENGTAVYRLVGAGPGGTPIIARRSGIAKALILRTLYSKMLSRLLIAAPRYCAFRAESPRCAWLFLEERRGGRP
Ga0066655_100015672	3300018431	Grasslands Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLDEGGGGRP
Ga0066667_100052122	3300018433	Grasslands Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGMTRARVVRTIYQKMLSRLPIRASRYYGFRAEAPGFAWVFLEEGGGGRP
Ga0184643_12120321	3300019255	Groundwater Sediment	TAPTPDCIEVLRADHGNAVYRLVGAGPSGAPIIARRSGKARALIARALYEKLLSRLPITAPRYCAFSAEDPEHAWVFLEER
Ga0184643_14884551	3300019255	Groundwater Sediment	AAWREVAPTAPTPDCIEVLRRENGTGTYRLVGAGPGGTPIIARRSGIAKALILRTLYSKMLSRLPIAAPRYCAFRAESLRCAWLFLEERGGGRP
Ga0210382_100325352	3300021080	Groundwater Sediment	MGMVLWGNLSWHPAADAWRQVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGIAKAVILRTLYSKLLSRLPIAAPRYCAFRAESPQFAWVF
Ga0210382_104823791	3300021080	Groundwater Sediment	MGMVLWGNLAWHPAAEAWRQVAPTAPAPESIEVLHRENGTGTYRLVGVGPGGTPIIARRSGITKAVILRTLYSKILSRLPIPAARYCAFRAE
Ga0224452_10060672	3300022534	Groundwater Sediment	MGMVLWGNLAWHPAAEAWRQVAPTAPAPESIEVLHRENGTGTYRLVGVGPGGTPIIARRSGITKAVILRTLYSKILSRLPIPAARYCAFRAEPPGFAWVFLEERGGAGR
Ga0209235_10195432	3300026296	Grasslands Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLRRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPAFAWVFLDEGGGDRP
Ga0209237_10124093	3300026297	Grasslands Soil	MGMVLWGKLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLDEGGGGRP
Ga0209239_10086335	3300026310	Grasslands Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGAPIIARRSGMTRARVVRTIYEKMLSRLPIRASRYYGFRAEGPGFAWVFLEEGGGGRP
Ga0209761_10123832	3300026313	Grasslands Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGMTRARVVRTIYEKMLSRLPIRMSRYYGFRAEGPGFAWVFLEEGGGGRP
Ga0209268_11807321	3300026314	Soil	CIEVLHRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLDEGGGGRP
Ga0209802_10309691	3300026328	Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGMTRARVVRTIYEKMLSRLPIRASRYYGFRAEGPGFAWVFLEEGGGGRP
Ga0209375_10229532	3300026329	Soil	MGMVLWGNLSWHPAAEAWRQVAPTAPAPESIEVLHRENGTGTYRLVGVGTGGTPIIARRSGITKAVILRTLYSKILSRLPISAPRYCAFRAEPPGFAWVFLEECGGGRP
Ga0209375_11479482	3300026329	Soil	MGMVLWGNLSWHPAADAWRQVAPAAPTPECIEVLHRENGTATYRLVGAGPRGTPIIARRSGITKALILRALYSKMLSRLPIAAPRYCAFRAESSGFAWVFLEECRGGRA
Ga0209158_10021365	3300026333	Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLRRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSHLPIAAPRYCAFRADGPAFAWVFLDEGGGDRP
Ga0209690_10146221	3300026524	Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLRRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWV
Ga0209157_10924982	3300026537	Soil	MGMVLLGNLSWHPAAVAWREVAPTAPTPESIEVLRRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLDEGGGGRP
Ga0209056_100137091	3300026538	Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLHRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRA
Ga0209056_101736822	3300026538	Soil	MGMVLLGNLSWHPAAVAWREVAPTAPTPESIEVLRRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRA
Ga0209689_10132173	3300027748	Soil	MGMVLWGNLSWHPAAAAWREVAPTAPTPECIEVLRRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLDEGGGGRP
Ga0209590_103408471	3300027882	Vadose Zone Soil	VAWREVAPTAPTPECIEVLRRENGTATYRLVGAGPGGTPIIARRSGRAKALVLRTLYEKMLSRLPIAAPRYCAFRADGPGFAWVFLDEGGGGRP
Ga0307282_104672432	3300028784	Soil	VLNRENGTGTYRLVGVGPGGTPIIARRSGITKAVILRTLYSKILSRLPIPAARYCAFRAEPPGFAWVFLEERGGVGP
Ga0307302_105124261	3300028814	Soil	RAVTPTAPTPDCIEVLRADHGNAVYRLVGAGPSGAPIIARRSGMTRALIVRTLYERILSRLPITAPQYRAFRAEGPAHAWVFLEER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086885

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences