Metagenome / Metatranscriptome Family F087009

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087009
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	93 residues
Representative Sequence	VTNFSKDQLDKIRALLEKAGVKPECPACKHGMLVLDRGQFGLQEAAQLRENPTVAPGGTAGPTGRIATCVLFACNSCGFVRMHSLAAIGLDNMM
Number of Associated Samples	100
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.18 %
% of genes near scaffold ends (potentially truncated)	24.55 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.455 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (30.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.091 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.93% β-sheet: 22.95% Coil/Unstructured: 63.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00072	Response_reg	3.64
PF09394	Inhibitor_I42	1.82
PF12773	DZR	1.82
PF08447	PAS_3	1.82
PF13520	AA_permease_2	1.82
PF13964	Kelch_6	1.82
PF13545	HTH_Crp_2	0.91
PF00171	Aldedh	0.91
PF04120	Iron_permease	0.91
PF14340	DUF4395	0.91
PF00593	TonB_dep_Rec	0.91
PF12680	SnoaL_2	0.91
PF00691	OmpA	0.91
PF14534	DUF4440	0.91
PF03807	F420_oxidored	0.91
PF08327	AHSA1	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.91
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.91
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.45 %
All Organisms	root	All Organisms	34.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.45 %
cellular organisms	root	All Organisms → cellular organisms	34.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.45 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	17.27 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.45 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	15.45 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.73 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.91 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.91 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.91 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.45 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	11.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.91 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.91 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.91 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.91 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.45 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	11.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.91 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.91 %
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	0.91 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.91 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.91 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.45 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	10.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.91 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.91 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.91 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.91 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.91 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.91 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.45 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	10.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	0.91 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.91 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.91 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.91 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.91 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.91 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.45 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	10.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	0.91 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	0.91 %
Rhizobium wenxiniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium wenxiniae	0.91 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.91 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.91 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.91 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.45 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	10.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Gemmatimonas sp. SG8_38_2	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp. SG8_38_2	0.91 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	0.91 %
Rhizobium wenxiniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium wenxiniae	0.91 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.91 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.91 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.91 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_175_length_1789_cov_9.368921	Not Available	1821	Open in IMG/M
2162886012\|MBSR1b_contig_7648224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2281	Open in IMG/M
2170459015\|G14TP7Y01EV11D	Not Available	602	Open in IMG/M
2199352024\|deeps_contig57127.35303	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1597	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_13386868	Not Available	557	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14416191	Not Available	1914	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105515265	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	843	Open in IMG/M
3300000787\|JGI11643J11755_11451555	Not Available	1089	Open in IMG/M
3300000789\|JGI1027J11758_11897303	Not Available	564	Open in IMG/M
3300000953\|JGI11615J12901_11425736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1682	Open in IMG/M
3300004157\|Ga0062590_103030425	Not Available	503	Open in IMG/M
3300004479\|Ga0062595_101210072	Not Available	671	Open in IMG/M
3300005093\|Ga0062594_100705081	Not Available	911	Open in IMG/M
3300005093\|Ga0062594_102855926	Not Available	537	Open in IMG/M
3300005293\|Ga0065715_10210402	Not Available	1317	Open in IMG/M
3300005437\|Ga0070710_11282893	Not Available	544	Open in IMG/M
3300005440\|Ga0070705_100813419	Not Available	744	Open in IMG/M
3300005445\|Ga0070708_100525637	Not Available	1116	Open in IMG/M
3300005468\|Ga0070707_100839264	Not Available	883	Open in IMG/M
3300005518\|Ga0070699_101227611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	688	Open in IMG/M
3300005536\|Ga0070697_101983713	Not Available	521	Open in IMG/M
3300005546\|Ga0070696_100108587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium wenxiniae	1996	Open in IMG/M
3300005547\|Ga0070693_101152167	Not Available	593	Open in IMG/M
3300005549\|Ga0070704_100093402	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300005841\|Ga0068863_100173232	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2070	Open in IMG/M
3300005874\|Ga0075288_1010027	Not Available	1251	Open in IMG/M
3300006049\|Ga0075417_10428808	Not Available	657	Open in IMG/M
3300006755\|Ga0079222_10152100	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1317	Open in IMG/M
3300006806\|Ga0079220_10357075	Not Available	932	Open in IMG/M
3300006845\|Ga0075421_101110347	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300006853\|Ga0075420_100852425	All Organisms → cellular organisms → Bacteria → FCB group	784	Open in IMG/M
3300006854\|Ga0075425_101468618	Not Available	770	Open in IMG/M
3300006871\|Ga0075434_102110325	Not Available	568	Open in IMG/M
3300006903\|Ga0075426_11232882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	567	Open in IMG/M
3300006904\|Ga0075424_100222885	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2004	Open in IMG/M
3300009081\|Ga0105098_10782850	Not Available	514	Open in IMG/M
3300009090\|Ga0099827_10262677	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300009146\|Ga0105091_10248138	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	858	Open in IMG/M
3300009147\|Ga0114129_10299388	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2144	Open in IMG/M
3300009147\|Ga0114129_10528762	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1536	Open in IMG/M
3300009157\|Ga0105092_10308644	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	893	Open in IMG/M
3300009168\|Ga0105104_10033786	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2855	Open in IMG/M
3300009789\|Ga0126307_11402193	Not Available	566	Open in IMG/M
3300009836\|Ga0105068_1054420	Not Available	728	Open in IMG/M
3300010036\|Ga0126305_10349943	Not Available	967	Open in IMG/M
3300010036\|Ga0126305_11017189	Not Available	569	Open in IMG/M
3300010037\|Ga0126304_10038486	All Organisms → cellular organisms → Bacteria	2856	Open in IMG/M
3300010040\|Ga0126308_10940661	Not Available	604	Open in IMG/M
3300010041\|Ga0126312_11195577	Not Available	560	Open in IMG/M
3300010166\|Ga0126306_10236904	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300010371\|Ga0134125_10261181	Not Available	1923	Open in IMG/M
3300010371\|Ga0134125_10406806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1509	Open in IMG/M
3300010396\|Ga0134126_10494210	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1411	Open in IMG/M
3300010400\|Ga0134122_11861666	Not Available	635	Open in IMG/M
3300011003\|Ga0138514_100112578	Not Available	595	Open in IMG/M
3300011119\|Ga0105246_12350526	Not Available	522	Open in IMG/M
3300011444\|Ga0137463_1039569	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1744	Open in IMG/M
3300012043\|Ga0136631_10383212	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	568	Open in IMG/M
3300012212\|Ga0150985_122842608	Not Available	1391	Open in IMG/M
3300012355\|Ga0137369_10097160	Not Available	2427	Open in IMG/M
3300012922\|Ga0137394_11576373	Not Available	514	Open in IMG/M
3300012930\|Ga0137407_12398437	Not Available	504	Open in IMG/M
3300012951\|Ga0164300_10801907	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	584	Open in IMG/M
3300012955\|Ga0164298_10063379	All Organisms → cellular organisms → Bacteria	1829	Open in IMG/M
3300012960\|Ga0164301_11721309	Not Available	524	Open in IMG/M
3300012987\|Ga0164307_11247568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	618	Open in IMG/M
3300013770\|Ga0120123_1078967	Not Available	732	Open in IMG/M
3300015372\|Ga0132256_101317516	Not Available	835	Open in IMG/M
3300017997\|Ga0184610_1171489	Not Available	718	Open in IMG/M
3300017997\|Ga0184610_1290277	Not Available	539	Open in IMG/M
3300018071\|Ga0184618_10158467	Not Available	929	Open in IMG/M
3300018075\|Ga0184632_10123105	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300018076\|Ga0184609_10132358	Not Available	1140	Open in IMG/M
3300018079\|Ga0184627_10450003	Not Available	669	Open in IMG/M
3300018422\|Ga0190265_10008379	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	7571	Open in IMG/M
3300018422\|Ga0190265_12965060	Not Available	567	Open in IMG/M
3300018429\|Ga0190272_10725350	Not Available	900	Open in IMG/M
3300018429\|Ga0190272_10798978	Not Available	868	Open in IMG/M
3300018429\|Ga0190272_13000432	Not Available	523	Open in IMG/M
3300019889\|Ga0193743_1109591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300021073\|Ga0210378_10406671	Not Available	504	Open in IMG/M
3300021080\|Ga0210382_10186490	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	898	Open in IMG/M
3300021412\|Ga0193736_1061469	All Organisms → cellular organisms → Bacteria → FCB group	519	Open in IMG/M
3300025910\|Ga0207684_10249772	Not Available	1530	Open in IMG/M
3300025922\|Ga0207646_10618654	Not Available	971	Open in IMG/M
3300025993\|Ga0208415_1008149	Not Available	970	Open in IMG/M
3300026095\|Ga0207676_10362116	Not Available	1344	Open in IMG/M
3300026116\|Ga0207674_12131832	Not Available	524	Open in IMG/M
3300027840\|Ga0209683_10385292	Not Available	644	Open in IMG/M
3300027873\|Ga0209814_10338564	Not Available	657	Open in IMG/M
3300027909\|Ga0209382_11691859	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp. SG8_38_2	621	Open in IMG/M
3300027957\|Ga0209857_1093396	Not Available	502	Open in IMG/M
3300028380\|Ga0268265_12072605	Not Available	576	Open in IMG/M
3300028592\|Ga0247822_11770902	Not Available	527	Open in IMG/M
3300028718\|Ga0307307_10145832	Not Available	738	Open in IMG/M
3300028744\|Ga0307318_10142437	Not Available	821	Open in IMG/M
3300028784\|Ga0307282_10158387	Not Available	1074	Open in IMG/M
3300028807\|Ga0307305_10349069	Not Available	671	Open in IMG/M
3300028807\|Ga0307305_10562458	Not Available	509	Open in IMG/M
3300028819\|Ga0307296_10514251	Not Available	655	Open in IMG/M
3300028824\|Ga0307310_10035123	All Organisms → cellular organisms → Bacteria → Acidobacteria	2032	Open in IMG/M
3300028828\|Ga0307312_10781173	Not Available	633	Open in IMG/M
3300030006\|Ga0299907_10402744	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300030606\|Ga0299906_10212336	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1526	Open in IMG/M
3300030993\|Ga0308190_1029748	Not Available	956	Open in IMG/M
3300031731\|Ga0307405_11400062	Not Available	611	Open in IMG/M
3300031908\|Ga0310900_11342184	Not Available	599	Open in IMG/M
3300031938\|Ga0308175_100148810	All Organisms → cellular organisms → Bacteria	2242	Open in IMG/M
3300032004\|Ga0307414_11917272	Not Available	553	Open in IMG/M
3300033551\|Ga0247830_10270022	Not Available	1295	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.09%
Host-Associated	Host-Associated	20.00%
Engineered	Engineered	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.45%
Plants	Host-Associated → Plants	20.00%
Aquatic	Environmental → Aquatic	13.64%
Solid Waste	Engineered → Solid Waste	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.64%
Freshwater	Environmental → Aquatic → Freshwater	7.27%
Sediment	Environmental → Aquatic → Sediment	6.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.36%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.91%
Grass	Engineered → Solid Waste → Grass	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.73%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.36%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.82%
Sand	Environmental → Terrestrial → Soil → Sand	1.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.91%
Ice	Environmental → Aquatic → Freshwater → Ice	0.91%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.91%
Composting	Engineered → Solid Waste → Grass → Composting	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.36%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.82%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.91%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.91%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.00%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	6.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.36%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.73%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.82%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.82%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.82%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.91%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.91%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.91%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.91%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021412	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025993	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027957	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_03105130	2140918013	Soil	MANFSKDQLDQIRGLLEKVGVKPECPTCKKGMLVIDRGQFGLLEVTQLRESPPGASGGTAGSTGRIATCVLLACNTCGFVRMHALTALGLDGM
MBSR1b_0333.00005510	2162886012	Miscanthus Rhizosphere	MIGGKGVSVTNFSKDQLDKIRAQLEKVGVKPECPACKRGMLVLDRGQFGLREVAQARDTPTGAPGGTAESTGRIATCVLFACNSCGFVRMHSLTAIGLDNMM
4PV_02866660	2170459015	Switchgrass, Maize And Mischanthus Litter	VTNFNKDQLDRIRALLEKVGVKPECPTCKKGMLVIDRGQFGLQEVTHSRENPTGASGGTAGSPGRTATCVLLACNTCGFVRMHSLAAIGLDNMM
deeps_00281190	2199352024	Soil	VTNFSKDQLDKIRELLEKSGVKPKCPVCQKGTMVLDRGQFGLQEVGQSRQNATDAQGGTAGSTGRVATCAFFGCNTCGYVRMHALAALGLDNMM
ICChiseqgaiiFebDRAFT_133868681	3300000363	Soil	FLEKVGVKPECPACKKGMMVIDRGQFGLQEVTQSRENPTGASEGKAGSTGRTATCVLLICNTCGFVRMHSLAAIGLDNMM*
ICChiseqgaiiFebDRAFT_144161912	3300000363	Soil	MANFSKDQLDQIRGLLEKVGVKPECPTCKKGMLVIDRGQFGLLEVTQLRESPPGASGGTAGSTGRIATCVLLACNTCGFVRMHALTALGLDGM*
INPhiseqgaiiFebDRAFT_1055152651	3300000364	Soil	VTNFSKDQLDKIRALLEKVGVKPECPACKQGMLVLDRGQFGLYEVAQLRENPMGAPGGTAGSTGRIATCVLYTCNSCGFVRMHSLMALGLDDMM*
JGI11643J11755_114515551	3300000787	Soil	GGRAADRAGLDRAHAEYVPAYPGGSMANFSKDQLDQIRGLLEKVGVKPECPTCKKGMLVIDRGQFGLLEVTQLRESPPGASGGTAGSTGRIATCVLLACNTCGFVRMHALTALGLDGM*
JGI1027J11758_118973031	3300000789	Soil	VTNFSKDQLDKIRALLEKVGVKPECPACKQGMLVLDRGQFGLYEVAQLRENPMGAPGGTAGSTGRIATXVLXXCNXCGXVRMHSLMALGLDDMM*
JGI11615J12901_114257363	3300000953	Soil	VSNFSKEQLDKIRALLEKAGVKPECPACKQGMLVLDRGQFGLQEVARLQENPTGASGGTAGPTGRIATCVLFACNSCGFVRMHSLTAIGLDNMM*
Ga0062590_1030304252	3300004157	Soil	MTNFSKEQLDKIRAFLEKVGVKPECPACKKGMMVIDRGQFGLQEVTQSRENPTGASEGKAGSTGRTATCVLLICNTCGFVR
Ga0062595_1012100722	3300004479	Soil	MTNFSKEQLDKIRAFLEKVGVKPECPACKKGMMVIDRGQFGLQEVTQSRENPTGASEGKAGSTGRTATCVLLICNTCGFVRMHALTALGLDNVV*
Ga0062594_1007050811	3300005093	Soil	MTNFSKDQLDKIRTLLDKVGVKPECPACKQGMMVLDRGQFGLHEVVQLRDNPTAAPGGTAGQTGRIATCVLFTCNRCGFVRMHSLAAIGLDSM*
Ga0062594_1028559261	3300005093	Soil	VTNFSKDQLDKIRALLERVGVKPECPACKQGMLVLDRGQFGLQEVVQSREVAREASGGTAGPAGRIATCVLLACNTCGFVRMHSLAAMGVDNMV*
Ga0065715_102104022	3300005293	Miscanthus Rhizosphere	MIGGKGVSVTNFSKDQLDKIRAQLEKVGVKPECPACKRGMLVLDRGQFGLREVAQARDTPTGAPGGTAESTGRIATCVLFACNSCGFVRMHSLTAIGLDNMM*
Ga0070710_112828931	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	ESVYAYAGVPMTNFSKDQLAQIRSLLEKVGVKPECPTCQGGMLVIDRGQFGLLEVTQLRQNPTEASGGTAGSTGRIATCVLLACNTCGFIRMHALTALGLDSML*
Ga0070705_1008134191	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VTNFSKDQLDKIRAQLEKVGVKPECPACKRGMLVLDRGQFGLREVAQARDTPTGAPGGTAESTGRIATCVLFACNSCGFVRMHSLTAIGLDNMM*
Ga0070708_1005256371	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTNFSKEQLDKIRAFLEKVGVKPECPACKKGMLVIDRGQFGLQEVTQSRENPTGASSSGTAGSTGRTATCVLLACNTCGFVRMHALTALGLDNVM*
Ga0070707_1008392642	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VTNFSKDQLDKIRTLLEKVGVKPECSACKQGMMVIDRGQFGLLEVAQSHGNPTRAPGGAAGSTGRIATCVLFACNSCGFVRMHSLAAIGLENMM*
Ga0070699_1012276111	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VTNFSKEQLDKVRALLEKSGVKPECPVCQRGMMVLDRGQFGLQEVAQLRQNPTEAPGGAAGPTGRIATCALFSCNTCGNVRMHALAALGLDSMM*
Ga0070697_1019837131	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTNFSKDQLDKVRALLDKVGVKPECPACKKGMMVLDRGQFGLHEVAHLPDPTGAPGGAAGSTGRTATCVLFACNSCGFVRMHSVTALGLETT*
Ga0070696_1001085876	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	ETTLKTKGVSVTNFSKEQLDKVRALLEKSGVKPECPVCQRGMMVLDRGQFGLQEVAQLRQNPTEAPGGAAGPTGRIATCALFSCNTCGNVRMHALAALGLDSMM*
Ga0070693_1011521672	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MTNFSREQLDRIRAFLEKVGVKPECAACKKGMMVIDRGQFGLQEVTQSRENPTGASEGKAGSTGRTATCVLLICNTCGFVRMHALTALGLDNVV*
Ga0070704_1000934022	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VTNFSKDQLDKIRAQLEKVGVKPECPACKRGMLVLDRGQFGLQEVAQARDTTTGAPGGTAESTGRIATCVLFACNSCGFVRMHSLTAIGLDNMM*
Ga0068863_1001732323	3300005841	Switchgrass Rhizosphere	VTNFSKDQLDKIRTLLDKFGVKPQCPACKQGMLVLDRGQFGLPEVAQVREDHPGASGGSAGSTGRIATCVLLACNSCGFVRMHSVAAMGLDNMM*
Ga0075288_10100273	3300005874	Rice Paddy Soil	VTNFSKEQLDKIRGLLEKVGVNQECPTCKKGTLVMDRGQFGLMEVTQLRENPAGASGGAGSTGRIATCVLFACNTCGFVRMHALTALDLDSMV*
Ga0075417_104288081	3300006049	Populus Rhizosphere	MIGGKGVSVTNFSKDQLDKIRAQLEKVGVKPECPACKRGMLVLDRGQFGLQEVAQARDTPTGAPVGTAESTGRIATCVLFACNSCGFVRMHSLTAIGLDNMM*
Ga0079222_101521002	3300006755	Agricultural Soil	MTNFSKEQVAQIRSLLEKAGVKPECATCQKGMLVIDGGQFGLLEVTQLRQNPTEAPGGTAGSTGRIATCVLLACNTCGFIRMHALTALGVDSML*
Ga0079220_103570751	3300006806	Agricultural Soil	MTNFSKEQVAQIRSLLEKAGVKPECPTCQKGMLVIDRGQFGLLEVTQLRQNPTEAPGGTAGSTGRIATCVLLACNTCGFIRMHALTALGVDSML*
Ga0075421_1011103472	3300006845	Populus Rhizosphere	VTEFSKDQLDKIRGILERAGVKPQCPACRQGMMVINRGQIGIMEVGQLQESPTAASGGGAGPTGRIATCVLFACNTCGFVRLHSMTALDMDGMR*
Ga0075420_1008524252	3300006853	Populus Rhizosphere	SFSKDQLDKIRAVLERVGVKPECPACQRGMLVLDRGQFGLQEVVQVREDPTAASGGTAGSTGRIATCVLFACNSCGFVRMHSLTAIGHDNLL*
Ga0075425_1014686182	3300006854	Populus Rhizosphere	VTNFSKDQLDKIRAQLEKVGVKPECPACKRGMLVLDRGQFGLQEVAQARDTPTGAPVGTAESTGRIATCVLFACNSCGFVRMHS
Ga0075434_1021103252	3300006871	Populus Rhizosphere	VTNFSKDQLDKIRALLEKVGVKPECPACKQGMLVLDRGQFGLFEVAQLRENPTAAPGGAAGSTGRIATCVLYTCNSCGFVRMHSLMALGLDDMM*
Ga0075426_112328821	3300006903	Populus Rhizosphere	VTNFSKDQLDKIRERLEKSGVKPKCPVCQKGTMVLDRGQFGLQEVGQSRQNATDAPGGTAGSTARVATCAFFGCNTCGYVRMHALAALGLDNMM*
Ga0075424_1002228853	3300006904	Populus Rhizosphere	VTNFSKDQLDKIRAQLEKVGVKPECPACKRGMLVLDRGQFGLQEVAQARDTPTGAPVGTAESTGRIATCVLFACNSCGFVRMHSLTAIGLDNMM*
Ga0105098_107828501	3300009081	Freshwater Sediment	VTNFSKEQLDKIRALLEKVGVKPECPACRRGMMVLDRGQFTLQEAAQSRENPTGAPGGAAGSTGRVATCVLLACNTCGFVRMHSLAAIGQDNMI*
Ga0099827_102626771	3300009090	Vadose Zone Soil	VTNFSKDQLDKIRALLERVGVKPECPACKQGMLVLDRGQFGLQEVAQLHENPTVAPSGTAGPTGRIATCVLFACNSCGFVRMHSLTAIGLDNMM*
Ga0105091_102481382	3300009146	Freshwater Sediment	VTNFSKDQLDKIRALLEKVGVKPECPACRRGTMVLDRGQFVLQEAAQSPAGTAGPTGRVATCVLLACNTCGFVRMHSVAAIGQDNMI*
Ga0114129_102993884	3300009147	Populus Rhizosphere	VTEFSKDQLDKIRGILERAGVKPQCPACRQGMMVINRGQIGIMEVAQLQESPTAASGSGAGPTGRIATCVLFACNTCGFVRLHSMTALDMDGMR*
Ga0114129_105287623	3300009147	Populus Rhizosphere	MTLRKGVAVTNFSKDQLDKIRAQLEKVGVKPECPACKRGMLVLDRGQFGLQEVGQARDTPTGAPGGTAESTGRIATCVLFACNSCGFVRMHSLTAIGLDNMM*
Ga0105092_103086442	3300009157	Freshwater Sediment	VTNFSKEQLDKIRALLEKVGVKPECPACRRGMMVLDRGQFILQEAAQSRENPTGDPGGAAGSTGRVATCVLLACNTCGFVRMHSLAAIGQDNMI*
Ga0105104_100337862	3300009168	Freshwater Sediment	VTNFSKDQLDKIRALLEKVGVKPECPACRRGTMVLDRGQFVLQEAAQSPAGTAGPTGRLATCVLLACNTCGFVRMHSLAAIGQDNMI*
Ga0126307_114021931	3300009789	Serpentine Soil	VTNFSKDQLDKIRAMLEKAGVKPECPACRKGMLVLDRGQFGLLEVAQRENPTGPSGGTAGSRGRIATCALSACSTCGFIRMHSLTAIGLENMI*
Ga0105068_10544202	3300009836	Groundwater Sand	VTNFSKDQLDKIRALLERVGVKPECPACQHGMLVLDRGQFGLQEVAQLRENPTGAPGGTAGPTGRIATCVLFACNSCGFVRMHSLMAIGLDNTM*
Ga0126305_103499432	3300010036	Serpentine Soil	VTNFSKDQLDKIRAMLEKAGVKPECPACRKGMLVLDRGQFGLLEVAQRENPTGGTAGSTGRIATCALSACSSCGFIRMHSLTAIGLDT*
Ga0126305_110171891	3300010036	Serpentine Soil	EKAGVKPECPACRKGMLVLDRGQFGLLEVAQRENPTGPSGGTAGSTGRIATCALSACSTCGFIRMHSLTAIGLENMI*
Ga0126304_100384864	3300010037	Serpentine Soil	VTNFSKDQLDKIRAMLEKAGVKPECPACRKGMLVLDRGQFGLLDVAQRENPTGPSGGTAGSTGRIATCALSACSSCGFIRMHSLTAIGLDT*
Ga0126308_109406611	3300010040	Serpentine Soil	VTNFSKDQLDKIRAMLEKAGVKPECPACRKGMLVLDRGQFGLLEVAQRENPTGPSGGTAGSTGRIATCALSACSTCGFIRMHSLTAIGLENMI*
Ga0126312_111955772	3300010041	Serpentine Soil	MTNFSKEQLDKIRALLEKLGVKPECPACKKGMLVIDRGQFGLQEVTQSRENPTGASGGAAGSTGRTATCVLLACNTCGFVRMHSLAAIGLDNMM*
Ga0126306_102369041	3300010166	Serpentine Soil	VTNFSKDQLDKIRAMLEKAGVKPECPACRKGMLVLDRGQFGLLEVAQRENPTGPSGGTAGSTGRIATCALSACSSCGFIRMHSLTAIGLDT*
Ga0134125_102611811	3300010371	Terrestrial Soil	MTNFSREQLDRIRAFLEKVGVKPECAACKKGMMVIDRGQFGLQEVTQSRENPMGASGGTAGSTARTATCVLLACNTCGFVRMHALAALGPDIVM*
Ga0134125_104068061	3300010371	Terrestrial Soil	VTNFSKDQLDKIRAQLEKVGVKPECPACKRGMLVLDRGQFGLREVAQARDTPTGAPGGTAESTGRIATCVLFACNSCGFVRMHSLTAIG
Ga0134126_104942101	3300010396	Terrestrial Soil	SVSRYEAKGVSMTNFSREQLDRIRAFLEKVGVKPECAACKKGMMVIDRGQFGLQEVTQSRENPMGASGGTAGSTARTATCVLLACNTCGFVRMHALAALGPDIVM*
Ga0134122_118616661	3300010400	Terrestrial Soil	VSVTNFSKDQLDKIRAQLEKVGVKPECPACKRGMLVLDRGQFGLREVAQARDTPTGAPGGTAESTGRIATCVLFACNSCGFVRMHSLTAIGLDNMM*
Ga0138514_1001125781	3300011003	Soil	MPNFSKDQLDKIRAFLEKVSVKPECPACKKGRLVIDRGQFGLQEVTQSRENLTGASGGPAGSTGRTATCVLLVCNTCGFVRMHALTALGLDSMM*
Ga0105246_123505261	3300011119	Miscanthus Rhizosphere	VTNFSKDQLDKIRALLEKVGVKPECPACTKGMLVIDRGQFGLQEVTQSRENPPGASGGTAGSTGRTATCVLSACNTCGFVRMHSLAAIALDNMM*
Ga0137463_10395692	3300011444	Soil	MTNFSKEQLDKIRAFLEKVGVKPECPACKKGMLVIDRGQFGLQEVTQSRENPTAASGGTAGSTGRTATCVLLACNTCGFVRMHALTALGLDNVT*
Ga0136631_103832121	3300012043	Polar Desert Sand	VTNFSKDQLDKIRALLERVGVKPECPACQHGMLVLDRGQFGLQEVAQLRENPPGASGGAAGPTGRIATCALFACNSCGFVRMHS
Ga0150985_1228426082	3300012212	Avena Fatua Rhizosphere	VTNFSKDQLDKIRALLEKVGVKPGCPACKQGMLVLDRGQFGLQEVAQLRENLTRAPGGTAGPTGRIATCVLLACNTCGFVRMHSLAAIGLDNMVVKSP*
Ga0137369_100971604	3300012355	Vadose Zone Soil	VTNFSKDQLDKIRALLEKAGVKPECPACKHGMLVLDRGQFGLQEAAQLRENPTVAPGGTAGPTGRIATCVLFACNSCGFVRMHSLAAIGLDNMM*
Ga0137394_115763732	3300012922	Vadose Zone Soil	VTNFSKDQLDKIRTLLDKVGVKPECPACKQGMMVLDRGQFGLQEVAQSRDNPTGAPGGAAGSTGRIATCVLFACNSCGFVRMHSLTAFGLDNMT*
Ga0137407_123984371	3300012930	Vadose Zone Soil	VTSFSKDQLDKIRAPLERVGVKPECPACKQGMLVLDRGQFGLQELMTQARDNPTGAPGGTAGPTGRIATCVLFVCNSCGFVRMHSLT
Ga0164300_108019072	3300012951	Soil	MTNFSKDELDKIRGLLEKAGVKPECPTCKKGMLVIDRGQFGLLEVAQLRENPPGATGGTAGSTGRIATCALLACNTCGFVRMHALTALGLESMT*
Ga0164298_100633792	3300012955	Soil	MTNFSKEQLDKIRGLLEKAGVKPECPTCKKGMLVIDRGQFGLREVTQLRENATEASGGTAGPTGRIATCVLLACNTCGFVRMHALTALGLDGMV*
Ga0164301_117213091	3300012960	Soil	MTNFSKDQLDKIRGLLEKAGVKPECPTCKKGMLVIDRGQFGLLEVAQLRENPPGATGGTAGSTGRIATCALLACNTCGFVRMHALTALGLESMT*
Ga0164307_112475682	3300012987	Soil	EQLDKIRGLLEKAGVKPECPTCKKGMLVIDRGQFGLREVTQLRENGTEASGGTAGPTGRIATCVLLACNTCGFVRMHALTALGLDGMV*
Ga0120123_10789671	3300013770	Permafrost	VTNFSKDQLDKIRALLEKVGVKPQCPACKQGMLVLDRGQFGLQEVAQLSENPTVAPGGPAGPRGRTATCVLFACNSCGFVRMHSLTAFGLDNMT*
Ga0132256_1013175162	3300015372	Arabidopsis Rhizosphere	VTNFSKDQLDKIRALLEKVGAKPECPACKQGMLVLDRGQFGLFEVAQLRENPTAAPGGTAGSTGRIATCVLFTCNSCGFVRMHSLMALGLDNMM*
Ga0184610_11714892	3300017997	Groundwater Sediment	VTNFSKDQLDKIRALLEKVGVKPECPACKQGMLVLDRGQFGLQEVAQLRENLTGAPGGTAGPTGRIATCVLFACNSCGLVRMHSLAAIDLDNTM
Ga0184610_12902772	3300017997	Groundwater Sediment	MTNFSKEQLDKIRAFLEKVGVKPECTACKKGMLVIDRGQFGLQEVTQSRENPTGASGGTAGSTGRTATCVLLACNTCGLVRMHSLAAIDLDNTM
Ga0184618_101584672	3300018071	Groundwater Sediment	VTNFSKDQLDKIRALLDKVGVKPECPACKKGMMVLDRGQFGLQEVAQLRENPTGAPGDAAGSTGRIATCVLFACNSCGFVRMHSLAAGGLETT
Ga0184632_101231052	3300018075	Groundwater Sediment	VTNFSKDQLDKIRTLLETAGVKPECPACRRGMLVLDRGQFGLQEVAQLRENPTGASGGTAGPTGRIATCVLFACNSCGFVRMHSLTAIGQDNML
Ga0184609_101323582	3300018076	Groundwater Sediment	VTNFSKDQLDKIRTLLETAGVKPECPACRRGMLVLDRGQFGLQEVAQLRENPTGASGGTAGPTGRIATCVLFACNSCGFVRMHSLTAIGQDNMI
Ga0184627_104500031	3300018079	Groundwater Sediment	VTNFSKDQLDKIRALLERVGVKPECPACQHGMLVLDRGQFGLQEVAQMRENPTEGPGGTAGPTGRIATCVLFACNSCGFARMHSLTAIGLDNPM
Ga0190265_100083797	3300018422	Soil	VTNFSKDQLDKIRALLEKVGVKPECPACRHGTLVLDRGQFGLQEVGQSPENLSGAPGGAAGPTGRIATCVLFACNSCGFVRMHSLTAIGLDNKM
Ga0190265_129650601	3300018422	Soil	VTNFSKDQLDKIRALLERVGVKPECPACQRGMLVLDRGQFGLQEVGQLRENPTGASGGMAGPTGRIATCVLFACNTCGFVRMHSLTAIGQDNML
Ga0190272_107253502	3300018429	Soil	VTNFSKDQLDKIRALLEKVGVKSECPACKQGMLVLDRGQFGLLEVAQVRDNPTEATGGAAGSTGRIATCVLFACNSCGLVRMHSLAAIGLDNTM
Ga0190272_107989782	3300018429	Soil	VTNFSKDQLDKIRALLERVGVKPECPACQRGTLVLDRGQFGLQEVGENPAGAPGGTAGPTGRIATCVLFACNGCGFVRMHSLTAIGLDNLV
Ga0190272_130004322	3300018429	Soil	VTNFSKDQLDKIRALLEKVGVKPECPACRHGTLVLDRGQFGLQEVGQSPENLSGAPGGAAGPTGRIATCVLFACNSCGFVRMHSLTAIGQDNMV
Ga0193743_11095911	3300019889	Soil	VTNFSKDQLDKIRALLEKVGVKSECPACKQGMLVLDRGQFGLLEVAQVRDNPTEATGGAAGSTGRIATCVLLACNTCGLV
Ga0210378_104066711	3300021073	Groundwater Sediment	VTNFSKDQLDKIRALLERVGVKPECPACQHGMLVLDRGQFGLQEVAQLPEPPTGAPSATAGPMGRIATCVLFACNSCGFVRMHSLTAIGQDNIV
Ga0210382_101864902	3300021080	Groundwater Sediment	VTNFSKDQLDKIRALLERVGVKPECPACKQGMLVLDRGQFGLQEVVQSRENPTVAPGGMAGPTGRIATCVLLACNSCGFVRMHSLAAIGLDNMM
Ga0193736_10614691	3300021412	Soil	VTNFSKDQLDKIRTLLETAGVKPECPACRRGMLVLDRGQFGLQEVAQLRENPTGASGGTATGRIATCVLFACNSCGFVRMHSLTAIGQDNML
Ga0207684_102497723	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTNFSKEQLDKIRAFLEKVGVKPECPACKKGMLVIDRGQFGLQEVTQSRENPTGASSSGTAGSTGRTATCVLLACNTCGFVRMHALTALGLDNVM
Ga0207646_106186542	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTNFSKDQLDKIRTLLEKVGVKPECSACKQGMMVIDRGQFGLLEVAQSHGNPTRAPGGAAGSTGRIATCVLFACNSCGFVRMHSLAAIGLENMM
Ga0208415_10081492	3300025993	Rice Paddy Soil	VTNFSKEQLDKIRGLLEKVGVNQECPTCKKGTLVMDRGQFGLMEVTQLRENPAGASGGAGSTGRIATCVLFACNTCGFVRMHALTALDLDSMV
Ga0207676_103621163	3300026095	Switchgrass Rhizosphere	MTNFSKDQLDKIRTLLDKVGVKPECPACKQGMMVLDRGQFGLHEVVQLRDNPTAAPGGTAGQTGRIATCVLFTCNRCGFVRMHSLAAIGLDSM
Ga0207674_121318321	3300026116	Corn Rhizosphere	MTNFSKEQLDKIRAFLEKVGVKPECPACKKGMMVIDRGQFGLQEVTQSRENPTGASEGKAGSTGRTATCVLLICNTCGFVRMHALTALGLDNVV
Ga0209683_103852921	3300027840	Wetland Sediment	MANFSKEQLDKIRALLEKVGVKPECPACKKGMLVIDRGQFGLQEVVQLRESPTGAAGGTAGSTGRIATCVLSACNTCGFVRMHALTALGLDT
Ga0209814_103385641	3300027873	Populus Rhizosphere	MIGGKGVSVTNFSKDQLDKIRAQLEKVGVKPECPACKRGMLVLDRGQFGLQEVAQARDTPTGAPVGTAESTGRIATCVLFACNSCGFVRMHSLTAIGLDNMM
Ga0209382_116918591	3300027909	Populus Rhizosphere	AVTEFSKDQLDKIRGILERAGVKPQCPACRQGMMVINRGQIGIMEVGQLQESPTAASGGGAGPTGRIATCVLFACNTCGFVRLHSMTALDMDGMR
Ga0209857_10933962	3300027957	Groundwater Sand	KIRALLERVGVKPECPACQHGMLVLDRGQFGLQEVAQLRENPTGAPGGTAGPTGRIATCVLFACNSCGFVRMHSLMAIGLDNTM
Ga0268265_120726052	3300028380	Switchgrass Rhizosphere	MTNFSKDQLDKIRTLLDKVGVKPECPACKQGMMVLDRGQFGLHEVVQLRDNPTAAPGGTAGQTGRIATCVLFTCNRCGFVRMHSLAAIGLDNMM
Ga0247822_117709021	3300028592	Soil	LEKVGVKPEFPACKQGMLVLDRGQFGLYEVAQLRENPTGAPGGTAGSTGRIATCVIFTCNSCGFVRMHSLMALGLDNMM
Ga0307307_101458321	3300028718	Soil	MTNFSKDQLDKIRALLEKVGVKPQCPACKQGMLVLDRGQFGLQEAAQLRENPTVAPGGTAGPTGRVATCVLFACNSCGFVRMHSLTAIGLDNML
Ga0307318_101424372	3300028744	Soil	RALLEKVGVKPECPACKHGMLVLDRGQFGLQEAAPLRENPTGAPGGAAGPTGRIATCVLFTCNSCGFVRMHSLAAIGLEPGGSS
Ga0307282_101583872	3300028784	Soil	MTNFSKDQLDKIRALLEKVGVKPQCPACKQGMLVLDRGQFGLQEVAQLSENPTVAPGGAAGPTGRTATCVLFACNSCGFVRMHSLTAFGLDNMT
Ga0307305_103490692	3300028807	Soil	VTNFSKDQLDKIRALLERADVKPECPACKQGMLVLDRGQFGLQEVAQLRENSTAAAGGTGGSTGRIATCVLFSCNRCGFVRMHSLAAIGLDNMM
Ga0307305_105624581	3300028807	Soil	FSKDQLDKIRALLDKVGVKPECPACKKGMMVLDRGQFGLQEVRDNPTGAPGDAAGSTGRIATCVLFACNSCGFVRMHSLAAGGLETT
Ga0307296_105142511	3300028819	Soil	RALLDKVGVKPECPACKKGMMVLDRGQFGLQEVAQLRENPTGAPGDAAGSTGRIATCVLFACNSCGFVRMHSLAAGGLETT
Ga0307310_100351233	3300028824	Soil	VTNFSKDQLDKIRALLERADVKPECPACKQGMLVLDRGQFGLQEVAQLRENSTASAGGTGGSTGRIATCVLFSCNRCGFVRMHSLAAIGLDNMM
Ga0307312_107811731	3300028828	Soil	VTNFSKDQLDKIRALLEKVGVKPECPACTKGMLVIDRGQFGLQEVTQSRENPTGASGGTAGSTGRTATCVLSACNTCGFVRMHSLAAIGLDNMM
Ga0299907_104027442	3300030006	Soil	VTNFSKDQLDKIRAVLEKVGVKPECPACQRGILVLDRGQFGLQEVGENPTGAPGGTAGPTGRIATCVLFACNSCGFVRMHSLTAIGQDNMV
Ga0299906_102123363	3300030606	Soil	MTNFTKDQLDKIRALLEKVGVKPECPACRRGMLVLDRGQFGLQEVGENPTGAPGATAGPTGRIATCVLFACNSCGFVRMHSLTAIGLENMM
Ga0308190_10297482	3300030993	Soil	VTNFSKDQLDKIRALLEKVGVKPECPACKHGMLVLDRGQFGLHEVTPGGTAGPAGRIATCVLFSCNRCGFV
Ga0307405_114000622	3300031731	Rhizosphere	LEKVGVKPECPACKKGMLVMDRGQFGLQEVTQSRENPTGAAGGTAGSTGRIATCVLLACNTCGFVRMHALAALGLDNVM
Ga0310900_113421842	3300031908	Soil	VTNFSKDQLDKIRALLEKVGVKPECPACKQGMLVLDRGQFGLYEVAQLRENPTGAPGGTAGSTGRIATCVIFTCNSCGFVRMHSLMALGLDNMM
Ga0308175_1001488102	3300031938	Soil	MTNFSTEQLAKIRALLEKVGVKPECPACKKGMLVLDRGQFGLQEVAQLREDSTGAPGGTAGPTGRIATCVLLACSSCGFIRMHSAAAMGLDRA
Ga0307414_119172722	3300032004	Rhizosphere	DKIRTLLERLGVKPECPACTKGMLVLDRGQFGLQEVAQLHENPTASPGGTAASTGRIATCALLACSSCGFIRMHSLAAIGLEGML
Ga0247830_102700223	3300033551	Soil	VTNFSKDQLDKIRALLEKVGVKPESPACKQGMLVLDRGQFGLYEVAQLRENPTGAPGGTAGSTGRIATCVIFTCNSCGFVRMHSLMALGLDNMM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087009

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences