NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F087051

Metagenome Family F087051

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087051
Family Type Metagenome
Number of Sequences 110
Average Sequence Length 45 residues
Representative Sequence MFDKYIYIFLDKVMEWSGKINSWAWVKHLKYVEKRRFERNYGKRKR
Number of Associated Samples 76
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 58.18 %
% of genes near scaffold ends (potentially truncated) 30.91 %
% of genes from short scaffolds (< 2000 bps) 94.55 %
Associated GOLD sequencing projects 67
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (55.455 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(55.454 % of family members)
Environment Ontology (ENVO) Unclassified
(78.182 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(97.273 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 55.41%    β-sheet: 0.00%    Coil/Unstructured: 44.59%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF137592OG-FeII_Oxy_5 15.45
PF00961LAGLIDADG_1 11.82
PF03592Terminase_2 2.73
PF13589HATPase_c_3 0.91
PF11753DUF3310 0.91
PF01327Pep_deformylase 0.91
PF02195ParBc 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG3728Phage terminase, small subunitMobilome: prophages, transposons [X] 2.73
COG0242Peptide deformylaseTranslation, ribosomal structure and biogenesis [J] 0.91


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms67.27 %
UnclassifiedrootN/A32.73 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10071566All Organisms → cellular organisms → Bacteria1591Open in IMG/M
3300000148|SI47jul10_100mDRAFT_c1000428Not Available11402Open in IMG/M
3300000256|LP_F_10_SI03_120DRAFT_1032215All Organisms → cellular organisms → Bacteria1035Open in IMG/M
3300001460|JGI24003J15210_10100282All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300002482|JGI25127J35165_1062384All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300002482|JGI25127J35165_1076089All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300002483|JGI25132J35274_1106392Not Available567Open in IMG/M
3300002483|JGI25132J35274_1123628All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300005057|Ga0068511_1008582All Organisms → cellular organisms → Bacteria1305Open in IMG/M
3300005057|Ga0068511_1038721Not Available756Open in IMG/M
3300005057|Ga0068511_1046509Not Available704Open in IMG/M
3300006735|Ga0098038_1049307All Organisms → cellular organisms → Bacteria1523Open in IMG/M
3300006735|Ga0098038_1088171All Organisms → cellular organisms → Bacteria1081Open in IMG/M
3300006735|Ga0098038_1091377All Organisms → cellular organisms → Bacteria1057Open in IMG/M
3300006735|Ga0098038_1104998Not Available971Open in IMG/M
3300006735|Ga0098038_1115951All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300006735|Ga0098038_1118125All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M903Open in IMG/M
3300006735|Ga0098038_1176746Not Available700Open in IMG/M
3300006737|Ga0098037_1077848All Organisms → cellular organisms → Bacteria1166Open in IMG/M
3300006737|Ga0098037_1109243All Organisms → cellular organisms → Bacteria952Open in IMG/M
3300006737|Ga0098037_1272116Not Available539Open in IMG/M
3300006749|Ga0098042_1158526Not Available552Open in IMG/M
3300006754|Ga0098044_1102169All Organisms → cellular organisms → Bacteria1173Open in IMG/M
3300006789|Ga0098054_1306176Not Available568Open in IMG/M
3300006922|Ga0098045_1129151Not Available588Open in IMG/M
3300006923|Ga0098053_1051251All Organisms → cellular organisms → Bacteria853Open in IMG/M
3300006924|Ga0098051_1212582Not Available503Open in IMG/M
3300006925|Ga0098050_1053957Not Available1055Open in IMG/M
3300006928|Ga0098041_1139920Not Available780Open in IMG/M
3300006929|Ga0098036_1068526All Organisms → cellular organisms → Bacteria1095Open in IMG/M
3300008012|Ga0075480_10151889Not Available1256Open in IMG/M
3300008216|Ga0114898_1134557Not Available719Open in IMG/M
3300008416|Ga0115362_100130777All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300009550|Ga0115013_11072894All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300009593|Ga0115011_10998995All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300009602|Ga0114900_1180440All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300010148|Ga0098043_1024640All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1915Open in IMG/M
3300010148|Ga0098043_1068509All Organisms → Viruses → Predicted Viral1064Open in IMG/M
3300010149|Ga0098049_1138693Not Available753Open in IMG/M
3300010149|Ga0098049_1251243Not Available537Open in IMG/M
3300010150|Ga0098056_1176577All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300010153|Ga0098059_1161824All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300010300|Ga0129351_1105298Not Available1131Open in IMG/M
3300010316|Ga0136655_1161165All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300012936|Ga0163109_10725267All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300013253|Ga0116813_1061374All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300017708|Ga0181369_1116423Not Available545Open in IMG/M
3300017717|Ga0181404_1160309All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300017721|Ga0181373_1085852Not Available559Open in IMG/M
3300017730|Ga0181417_1129791All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300017732|Ga0181415_1026364All Organisms → cellular organisms → Bacteria1346Open in IMG/M
3300017732|Ga0181415_1097756Not Available661Open in IMG/M
3300017733|Ga0181426_1022226All Organisms → cellular organisms → Bacteria1245Open in IMG/M
3300017738|Ga0181428_1063657All Organisms → cellular organisms → Bacteria860Open in IMG/M
3300017818|Ga0181565_10135933All Organisms → Viruses → Predicted Viral1724Open in IMG/M
3300017951|Ga0181577_10458001Not Available803Open in IMG/M
3300017951|Ga0181577_10785478All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300017951|Ga0181577_10864128All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300017951|Ga0181577_10925963All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300017985|Ga0181576_10410800All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300018415|Ga0181559_10126373All Organisms → cellular organisms → Bacteria1529Open in IMG/M
3300018416|Ga0181553_10109257All Organisms → Viruses → Predicted Viral1695Open in IMG/M
3300018416|Ga0181553_10499161Not Available650Open in IMG/M
3300018418|Ga0181567_10176656Not Available1468Open in IMG/M
3300018420|Ga0181563_10525616All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300018420|Ga0181563_10734994All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300018428|Ga0181568_10672962Not Available811Open in IMG/M
3300018876|Ga0181564_10288242All Organisms → cellular organisms → Bacteria920Open in IMG/M
3300020264|Ga0211526_1097519Not Available501Open in IMG/M
3300020403|Ga0211532_10271399Not Available659Open in IMG/M
3300020414|Ga0211523_10146794Not Available988Open in IMG/M
3300021347|Ga0213862_10109891All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium969Open in IMG/M
3300021375|Ga0213869_10090347Not Available1508Open in IMG/M
3300021378|Ga0213861_10028072All Organisms → cellular organisms → Bacteria3840Open in IMG/M
3300021378|Ga0213861_10273427All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300022164|Ga0212022_1025290All Organisms → cellular organisms → Bacteria900Open in IMG/M
(restricted) 3300022931|Ga0233433_10002297All Organisms → Viruses16941Open in IMG/M
(restricted) 3300024339|Ga0233445_1153711All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300024344|Ga0209992_10098976All Organisms → cellular organisms → Bacteria1311Open in IMG/M
3300025070|Ga0208667_1003042Not Available5221Open in IMG/M
3300025070|Ga0208667_1025306All Organisms → cellular organisms → Bacteria1108Open in IMG/M
3300025083|Ga0208791_1020195All Organisms → Viruses → Predicted Viral1369Open in IMG/M
3300025083|Ga0208791_1063653All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300025085|Ga0208792_1017729All Organisms → cellular organisms → Bacteria1512Open in IMG/M
3300025086|Ga0208157_1103149All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300025086|Ga0208157_1121816All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300025098|Ga0208434_1060641All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300025099|Ga0208669_1042996All Organisms → cellular organisms → Bacteria1055Open in IMG/M
3300025099|Ga0208669_1048953All Organisms → cellular organisms → Bacteria972Open in IMG/M
3300025101|Ga0208159_1070594Not Available677Open in IMG/M
3300025101|Ga0208159_1071225Not Available672Open in IMG/M
3300025102|Ga0208666_1046102All Organisms → cellular organisms → Bacteria1241Open in IMG/M
3300025102|Ga0208666_1081005All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M836Open in IMG/M
3300025102|Ga0208666_1084479Not Available810Open in IMG/M
3300025102|Ga0208666_1093822Not Available750Open in IMG/M
3300025120|Ga0209535_1058803All Organisms → Viruses1583Open in IMG/M
3300025120|Ga0209535_1103410All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300025127|Ga0209348_1042518All Organisms → Viruses → Predicted Viral1570Open in IMG/M
3300025131|Ga0209128_1001054All Organisms → Viruses19327Open in IMG/M
3300025132|Ga0209232_1065458All Organisms → cellular organisms → Bacteria1291Open in IMG/M
3300025133|Ga0208299_1018579Not Available3145Open in IMG/M
3300025151|Ga0209645_1088734All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M1018Open in IMG/M
3300025151|Ga0209645_1092832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium988Open in IMG/M
3300025151|Ga0209645_1115710Not Available855Open in IMG/M
3300027906|Ga0209404_10596091All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300028600|Ga0265303_11644001All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300029318|Ga0185543_1014206All Organisms → Viruses → Predicted Viral1931Open in IMG/M
3300029318|Ga0185543_1106830All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300029319|Ga0183748_1027589All Organisms → Viruses1888Open in IMG/M
3300029319|Ga0183748_1072918All Organisms → cellular organisms → Bacteria875Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine55.45%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh12.73%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine6.36%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater5.45%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater3.64%
Marine WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water2.73%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean1.82%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.82%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.82%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.82%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.91%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.91%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.91%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.91%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.91%
SedimentEnvironmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment0.91%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.91%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000148Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 47 07/07/10 100mEnvironmentalOpen in IMG/M
3300000256Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - ample_F_10_SI03_120EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300002482Marine viral communities from the Pacific Ocean - ETNP_2_30EnvironmentalOpen in IMG/M
3300002483Marine viral communities from the Pacific Ocean - ETNP_6_30EnvironmentalOpen in IMG/M
3300005057Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2umEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006749Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008416Sea floor sediment microbial communities from Gulf of Mexico Methane Seep - MPC12BEnvironmentalOpen in IMG/M
3300009550Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 MetagenomeEnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009602Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231EnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300012936Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaGEnvironmentalOpen in IMG/M
3300013253Marine hypoxic microbial communities from the Gulf of Mexico, USA - 10m_Station4_GOM_MetagenomeEnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017721Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaGEnvironmentalOpen in IMG/M
3300017730Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13EnvironmentalOpen in IMG/M
3300017732Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11EnvironmentalOpen in IMG/M
3300017733Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23EnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017985Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018415Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018418Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018876Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020264Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556116-ERR599158)EnvironmentalOpen in IMG/M
3300020403Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)EnvironmentalOpen in IMG/M
3300020414Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)EnvironmentalOpen in IMG/M
3300021347Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300022164Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2)EnvironmentalOpen in IMG/M
3300022931 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_100_MGEnvironmentalOpen in IMG/M
3300024339 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_100_MGEnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025083Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025085Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025099Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025101Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025102Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028600Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160317 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300029318Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289EnvironmentalOpen in IMG/M
3300029319Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1007156633300000101MarineMFDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRREERHYGKRKR*
SI47jul10_100mDRAFT_1000428133300000148MarineMFDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRRMERLYGKRKR*
LP_F_10_SI03_120DRAFT_103221513300000256MarineGKMFDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRRMERLYGKRKR*
JGI24003J15210_1010028233300001460MarineMLDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRREERLYGKRKR*
JGI25127J35165_106238423300002482MarineMLDKYIYMFLDKVMEWSGKINAWAWVKHLKYIEKKRFKRYHEKK*
JGI25127J35165_107608923300002482MarineMLDKYIYKFLDFVMEWSGKINSWAWVKHLKYIEKRREERYFGKRKRSDRS*
JGI25132J35274_110639223300002483MarineMLDKYIXMFLDKVMEWSGKINAWAWVKHLKYIEKKRFKRYHEKK*
JGI25132J35274_112362823300002483MarineMLDKYIYKFLDFVMEWSGKINSWAWVKHLKYIEKRXEERYFGKRKR*
Ga0068511_100858243300005057Marine WaterMLDKYIYMFLDKVMEWSGKINSCAWVKHLKYVEKRRFEKNFGKKK*
Ga0068511_103872123300005057Marine WaterMLDKYIYKFLDKVMEWSGKINAWAWVKHLKYIEKRREERYFGKRKR*
Ga0068511_104650933300005057Marine WaterMLDKYIYKFLDFVMEWSGKINSWAWVKHLKYIEKRRMIRNYGKRKR*
Ga0098038_104930723300006735MarineMFDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRRMEKLYGKRKR*
Ga0098038_108817133300006735MarineMFDKYIYIFLDKVMEWSGKINSWAWVKHLKYVEKRRFERNYGKRKR*
Ga0098038_109137733300006735MarineMFDKYIYMFLDKTMEWSGKINAWAWVKHLKYIEKRRFERLYGKRKR*
Ga0098038_110499813300006735MarineMFDKYIYIFLDKVMEWSGKINSWAWVKHLKYVEKRRFERNYGRRKR*
Ga0098038_111595123300006735MarineMFDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRRQERHYGKRKR*
Ga0098038_111812533300006735MarineMFDKYIYMFLDRVMEWSGKINSWAWVKHLKYVEKRRMERLYGKRKR*
Ga0098038_117674633300006735MarineMFDKYIYKFLDKVMEWSGKINAWAWVKHLKYIEKKRFKRYHEKK*
Ga0098037_107784853300006737MarineMFDKYVYMFLDKTMEWSGKINAWAWVKHLKYVEKRRFERLYGKRKR*
Ga0098037_110924333300006737MarineMLDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRREQRYYGKRKR*
Ga0098037_127211633300006737MarineIYMFLDRVMEWSGKINSWAWVKHLKYVEKRRMERLYGKRKR*
Ga0098042_115852633300006749MarineLDKTMEWSGKINSWAWVKHLKYVEKRREERHYGKRKR*
Ga0098044_110216933300006754MarineMQKKLIYKFLNFVMKWSSKIHAWAWVKHLKYTEKGRFERHYEKNY*
Ga0098054_130617613300006789MarineMNTKWLEKMFDKYIYMFLDRVMEWSGKINSWAWVKHLKYVEKRRMERLYGKRKR*
Ga0098045_112915113300006922MarineMNTKWLEKMFDKYIYMFLDRIMEWSGKINSWAWVKHLKYVEKRRMERLYGKRKR*
Ga0098053_105125113300006923MarineKMFDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRRMERLYGKRKR*
Ga0098051_121258233300006924MarineLDRIMEWSGKINSWAWVKHLKYVEKRRMERLYGKRKR*
Ga0098050_105395743300006925MarineYMFLDRVMEWSGKINSWAWVKHLKYVEKRRMERLYGKRKR*
Ga0098041_113992013300006928MarineMNIDKIVYKFLDFVMEWSGKINAWAWVKHLKYVEKNREERYFGKRKR*
Ga0098036_106852643300006929MarineMFDKYIYMFLDKTMEWSGKINAWAWVKHLKYVEKRRFERLYGKRKR*
Ga0075480_1015188913300008012AqueousMNIERYKKMFDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRREERHYGKRKR*
Ga0114898_113455733300008216Deep OceanMFDKYIYMFLDKIMEWSGKINAWAWVKHLKYVEKRRFERLYGKRKR*
Ga0115362_10013077723300008416SedimentMLDKYIYKFLDFVMEWSGKINSWAWVKHLKYIEKRREERYFGKRKR*
Ga0115013_1107289423300009550MarineMFDKYIYLFLDKVMEWSGKINSWAWVKHLKYVEKKREERYYGKRKR*
Ga0115011_1099899523300009593MarineMFDKYIYLFLDKVMEWSGKINSWAWVKHLKYVEKRRFERHYGKRKKR*
Ga0114900_118044023300009602Deep OceanMFDKYIYMFLDKIMEWSGKINAWAWVKHLKYVEKRRMQRLYSKKFDDVE*
Ga0098043_102464043300010148MarineMNIDKIVYKFLDFVMEWSGKINAWAWVKHLKYIEKNREERYFGKRKR*
Ga0098043_106850933300010148MarineMFDKYIYKFLDFMMEWSGKINAWAWVKHLKYIEKRRFERHYGKRKR*
Ga0098049_113869313300010149MarineKYIYMFLDRVMEWSGKINSWAWVKHLKYVEKRRMERLYGKRKR*
Ga0098049_125124313300010149MarineIFLDKVMEWSGKINSWAWVKHLKYVEKRRFERNYGKRKR*
Ga0098056_117657723300010150MarineMFDKYIYIFLDKTMEWSGKINAWAWVKHLKYIEKRRFERLYGKRKR*
Ga0098059_116182443300010153MarineMFDKYIYMFLDRIMEWSGKINSWAWVKHLKYVEKRR
Ga0129351_110529813300010300Freshwater To Marine Saline GradientMFLDKTMEWSGKINSWAWVKHLKYVEKRREERHYGKRKR*
Ga0136655_116116533300010316Freshwater To Marine Saline GradientMFDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRREE
Ga0163109_1072526723300012936Surface SeawaterMFDKYIYKFLDFVMEWSGKINSWAWVKHLKYIEKRRFERHFGKNEKK*
Ga0116813_106137423300013253MarineMLDKYVYKFLDFVMEWSGKINSWAWVKHLKYIEKRREERYFGKRKR*
Ga0181369_111642313300017708MarineFLDKVMEWSGKINAWAWVKHLKYIEKRREERFFGKRKR
Ga0181404_116030923300017717SeawaterMFDKYIYIFLDKVMEWSGKINSWAWVKHLKYVEKRRFQRNYGKRKR
Ga0181373_108585213300017721MarineKYIYIFLDKVMEWSGKINSWAWVKHLKYVEKRRFERNYGKRKR
Ga0181417_112979133300017730SeawaterDKTMEWSGKINSWAWVKHLKYVEKRRMERLYGKRKR
Ga0181415_102636463300017732SeawaterMLDKYIYMFLDKTMEWSGKINSWAWVKHLKYVGKRREQR
Ga0181415_109775633300017732SeawaterMFDKYIYIFLDKTMEWSGKINSWAWVKHLKYVEKRREERLYGKRKR
Ga0181426_102222633300017733SeawaterMFDKYIYISLDTVMEWSGKINSWAWVKHLKYVEKRRFQRNYGKRKR
Ga0181428_106365723300017738SeawaterMLDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKKREQRYYGKRKR
Ga0181565_1013593353300017818Salt MarshMLDKYIYKFLDFVMEWSGRINSWAWVKHLKYIEKRRFERHFGKHEKK
Ga0181577_1045800123300017951Salt MarshMLDKYIYKFLDFVMEWSGKINSWAWVKHLKYIEKRRFERHFGKHEKK
Ga0181577_1078547823300017951Salt MarshMLDKYIYKFLDKVMEWSGKINAWAWVKHLKYIEKRREERYFGKRKR
Ga0181577_1086412823300017951Salt MarshMFDKYIYMFLDKVMEWSGKINAWAWIKHLKYIEKKRFRRNFKKKFDDT
Ga0181577_1092596323300017951Salt MarshMLDKYIYKFLDFVMEWSGKINSWAWVKHLKYIKKRRMIRNYGKRKR
Ga0181576_1041080033300017985Salt MarshMLDKYIYKFLDFVMEWSGKINSWAWVKHLKYIEKRRFERHFGKNEKK
Ga0181559_1012637313300018415Salt MarshMLDKYIYKFLDKVMEWSGKINAWAWVKHLKYIEKRREERY
Ga0181553_1010925723300018416Salt MarshMFDKYIYMFLDKVMEWSGKINSWAWIKHLKYVEKKRFRRNFKKKFDDTE
Ga0181553_1049916123300018416Salt MarshMFDKYIYKFLDKIMEWSGKINAWAWVKHLKYIEKRRYERNWKNKK
Ga0181567_1017665633300018418Salt MarshMLDKYIYKFLDFVMEWSGKINSWAWVKHLKYVEKRRFERHFGKHEKK
Ga0181563_1052561613300018420Salt MarshMFDKYIYKFLDKVMEWSGKINAWAWVKHLKYIEKRREERYFGKRKR
Ga0181563_1073499423300018420Salt MarshMFDKYIYKFLDKIMEWSGKINAWAWVKHLKYIEKKREEKYFGKRKKYDR
Ga0181568_1067296213300018428Salt MarshDFVMEWSGKINSWAWVKHLKYVEKRRFERHFGKHEKK
Ga0181564_1028824233300018876Salt MarshMLDKYIYKFLDKVMEWSGKINAWAWVKHLKYIEKKRFKRFHEKK
Ga0211526_109751923300020264MarineKYIYKFLDFVMEWSGKINAWAWVKHLKYIEKKRFKRYHEKK
Ga0211532_1027139913300020403MarineKMLDKYIYKFLDFVMEWSGKINSWAWVKHLKYIEKRRYQRNFKKEK
Ga0211523_1014679423300020414MarineMFDKYIYKFLDFVMEWSGKINSWAWVKHLKYIEKRRFERNYGKRKR
Ga0213862_1010989123300021347SeawaterMFDKYIYKFLDFMMEWSGKINAWAWVKHLKYIEKRRFERHYGKRKR
Ga0213869_1009034743300021375SeawaterMFDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRREERHYGKRKR
Ga0213861_10028072153300021378SeawaterMFDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRR
Ga0213861_1027342713300021378SeawaterMLDKYIYKFLDFVMEWSGKINSWAWVKHLKYIEKRREERYFGK
Ga0212022_102529013300022164AqueousMFDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRREERHYGKRKG
(restricted) Ga0233433_10002297163300022931SeawaterMFDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRRMERLYGKRKR
(restricted) Ga0233445_115371123300024339SeawaterFDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRRMERLYGKRKR
Ga0209992_1009897623300024344Deep SubsurfaceMFDKYIYMFLDKIMEWSGKINAWAWVKHLKYVEKRRFERLYGKRKR
Ga0208667_1003042123300025070MarineMFDKYIYMFLDRVMEWSGKINSWAWVKHLKYVEKRRMERLYGKRKR
Ga0208667_102530633300025070MarineMLDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRREQRYYGKRKR
Ga0208791_102019543300025083MarineYIYKFLDFVMEWSGKINAWAWVKHLKYIEKKRFERNYGKRKK
Ga0208791_106365313300025083MarineMNTKWLEKMFDKYIYMFLDRVMEWSGKINSWAWVKHLKYVEKRRMERLYGKRK
Ga0208792_101772933300025085MarineMNTKWLEKMFDKYIYMFLDRVMEWSGKINSWAWVKHLKYVEKRRMERLYGKRKR
Ga0208157_110314933300025086MarineMFDKYIYMFLDKTMEWSGKINAWAWVKHLKYIEKRRFER
Ga0208157_112181613300025086MarineMNTKWLEKMFDKYIYMFLDRVMEWSGKINSWAWVKHLKYVEKRRMERL
Ga0208434_106064133300025098MarineMNTKWLEKMFDKYIYMFLDRVMEWSGKINSWAWVKHLKYVEKRRMERLY
Ga0208669_104299633300025099MarineMFDKYIYIFLDKVMEWSGKINSWAWVKHLKYVEKRRFERNYGKRKR
Ga0208669_104895333300025099MarineFLDFVMEWSGKINAWAWVKHLKYIEKRREERYFGKRKR
Ga0208159_107059433300025101MarineDRVMEWSGKINSWAWVKHLKYVEKRRMERLYGKRKR
Ga0208159_107122513300025101MarineMNIDKIVYKFLDFVMEWSGKINAWAWVKHLKYVEKNREERYFGKRKR
Ga0208666_104610243300025102MarineMFDKYIYMFLDKTMEWSGKINAWAWVKHLKYIEKRRFERLYGKRKR
Ga0208666_108100533300025102MarineMFDKYIYMFLDRVMEWSGKINSWAWVKHLKYVEKRRMERLYGK
Ga0208666_108447913300025102MarineYIYIFLDKVMEWSGKINSWAWVKHLKYVEKRRFERNYGKRKR
Ga0208666_109382223300025102MarineMFDKYIYKFLDKVMEWSGKINAWAWVKHLKYIEKKRFKRYHEKK
Ga0209535_105880353300025120MarineMLDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRREERLYGKRKR
Ga0209535_110341033300025120MarineMFDKYIYMFLDKAMEWSGKINSWAWIKHLKYVEKRREERNHGKRKR
Ga0209348_104251823300025127MarineMLDKYIYMFLDKVMEWSGKINAWAWVKHLKYIEKKRFKRYHEKK
Ga0209128_1001054183300025131MarineMFDKIIYMFLDKVMEWSGKINSWAWVKHLKYVEKRRMERLYGKRKR
Ga0209232_106545833300025132MarineMLDKYIYKFLDFVMEWSGKINSWAWVKHLKYIEKRREERYFGKRKRSDRS
Ga0208299_1018579123300025133MarineMQKKLIYKFLNFVMKWSSKIHAWAWVKHLKYTEKGRFERHYE
Ga0209645_108873423300025151MarineMKKGEKVLDKYIYNFLDFVMEWSGKINSWAWVKHLKYVEKRREERYFGKRKNYDK
Ga0209645_109283213300025151MarineFRIYKGGTMNIDKIVYKFLDFVMEWSGKINAWAWVKHLKYVEKNREERYFGKRKR
Ga0209645_111571023300025151MarineMLDKYIYKFLDFVMEWSGKINSWAWVKHLKYIEKRRFQRHFGKHEKK
Ga0209404_1059609133300027906MarineMFDKYIYLFLDKVMEWSGKINSWAWVKHLKYVEKRRFERHYGKRKR
Ga0265303_1164400123300028600SedimentMNIERYKKMFDKYIYMFLDKTMEWSGKINSWAWVKHLKYVEKRREERHYGKRKR
Ga0185543_101420613300029318MarineMLDKYIYKFLDFVMEWSGKINSWAWVKHLKYIEKKRFERNYGKRKR
Ga0185543_110683023300029318MarineFLDFVMEWSGKINSWAWVKHLKYIEKRREERYFGKRKRSDRS
Ga0183748_102758933300029319MarineMFDKYIYKFLDKVMEWSGKINAWAWVKHLKYIEKKREERYFGKRKKYDR
Ga0183748_107291823300029319MarineMLDKYIYMFLDKVMEWSGKINSWAWVKHLKYVEKRRFERNFKKGKENGNDKR


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