Metagenome Family F087053

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087053
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	53 residues
Representative Sequence	DIVGDPNDYEATEKAIEGIKKDLKPFVKGKIYQGFADGVKKFVKQRGGKV
Number of Associated Samples	82
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	26.36 %
% of genes from short scaffolds (< 2000 bps)	26.36 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (90.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (50.909 % of family members)
Environment Ontology (ENVO)	Unclassified (89.091 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.15% β-sheet: 0.00% Coil/Unstructured: 53.85%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01743	PolyA_pol	43.64
PF12627	PolyA_pol_RNAbd	9.09
PF12838	Fer4_7	6.36
PF00082	Peptidase_S8	3.64
PF04973	NMN_transporter	2.73
PF03851	UvdE	1.82
PF03061	4HBT	1.82
PF05118	Asp_Arg_Hydrox	0.91
PF01844	HNH	0.91
PF01467	CTP_transf_like	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0617	tRNA nucleotidyltransferase/poly(A) polymerase	Translation, ribosomal structure and biogenesis [J]	43.64
COG3201	Nicotinamide riboside transporter PnuC	Coenzyme transport and metabolism [H]	2.73
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	1.82
COG3555	Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily	Posttranslational modification, protein turnover, chaperones [O]	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.00 %
All Organisms	root	All Organisms	10.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.00 %
Viruses	superkingdom	All Organisms → Viruses	8.18 %
cellular organisms	root	All Organisms → cellular organisms	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.27 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.91 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	0.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.27 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	0.91 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.91 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.27 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	0.91 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.91 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.27 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.91 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.27 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.91 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.91 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.27 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.91 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.91 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.27 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	0.91 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.91 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.27 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	0.91 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.91 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000115\|DelMOSum2011_c10087691	All Organisms → Viruses → Predicted Viral	1058	Open in IMG/M
3300006735\|Ga0098038_1032201	All Organisms → Viruses → Predicted Viral	1953	Open in IMG/M
3300006749\|Ga0098042_1147583	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	577	Open in IMG/M
3300006754\|Ga0098044_1379483	Not Available	533	Open in IMG/M
3300006928\|Ga0098041_1038679	Not Available	1551	Open in IMG/M
3300009413\|Ga0114902_1154485	Not Available	579	Open in IMG/M
3300009593\|Ga0115011_10732607	Not Available	812	Open in IMG/M
3300010148\|Ga0098043_1220952	Not Available	520	Open in IMG/M
3300010883\|Ga0133547_10615432	All Organisms → Viruses → Predicted Viral	2168	Open in IMG/M
3300011013\|Ga0114934_10444144	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	576	Open in IMG/M
3300012920\|Ga0160423_10126263	All Organisms → Viruses → Predicted Viral	1802	Open in IMG/M
3300012920\|Ga0160423_10348811	Not Available	1015	Open in IMG/M
3300012920\|Ga0160423_11012661	Not Available	556	Open in IMG/M
3300012936\|Ga0163109_11411785	Not Available	507	Open in IMG/M
3300017729\|Ga0181396_1063144	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	741	Open in IMG/M
3300017743\|Ga0181402_1024802	All Organisms → Viruses → Predicted Viral	1694	Open in IMG/M
3300017752\|Ga0181400_1176904	Not Available	596	Open in IMG/M
3300017753\|Ga0181407_1029627	All Organisms → Viruses → Predicted Viral	1480	Open in IMG/M
3300017757\|Ga0181420_1088416	Not Available	961	Open in IMG/M
3300017757\|Ga0181420_1204791	Not Available	572	Open in IMG/M
3300017771\|Ga0181425_1072455	All Organisms → Viruses → Predicted Viral	1112	Open in IMG/M
3300017786\|Ga0181424_10273341	Not Available	704	Open in IMG/M
3300017986\|Ga0181569_10391195	Not Available	952	Open in IMG/M
3300020432\|Ga0211556_10475272	Not Available	551	Open in IMG/M
3300020438\|Ga0211576_10471005	Not Available	637	Open in IMG/M
3300025101\|Ga0208159_1037495	All Organisms → Viruses → Predicted Viral	1064	Open in IMG/M
3300025120\|Ga0209535_1122174	Not Available	883	Open in IMG/M
3300029319\|Ga0183748_1042557	Not Available	1352	Open in IMG/M
3300029319\|Ga0183748_1116711	Not Available	584	Open in IMG/M
3300029792\|Ga0183826_1064655	Not Available	555	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Strait	Environmental → Aquatic → Marine → Strait	50.91%
Oceanic	Environmental → Aquatic → Marine → Oceanic	30.91%
Unclassified	Environmental → Aquatic → Marine → Unclassified	10.00%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.73%
Volcanic	Environmental → Aquatic → Marine → Volcanic	2.73%
Coastal	Environmental → Aquatic → Marine → Coastal	1.82%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	50.91%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	26.36%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	10.00%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.55%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.82%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.82%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.91%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	50.91%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	24.55%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	10.00%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	3.64%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	2.73%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.82%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.82%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.91%
Marine Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water	0.91%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.91%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.91%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300005057	Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2um	Environmental	Open in IMG/M
3300005522	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV257	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300009058	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02	Environmental	Open in IMG/M
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009550	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300011252	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, permeate	Environmental	Open in IMG/M
3300011253	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, permeate	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017724	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017726	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300017729	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11	Environmental	Open in IMG/M
3300017730	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13	Environmental	Open in IMG/M
3300017732	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11	Environmental	Open in IMG/M
3300017733	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017739	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017745	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017770	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020315	Marine microbial communities from Tara Oceans - TARA_B100000405 (ERX555948-ERR598972)	Environmental	Open in IMG/M
3300020374	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020432	Marine microbial communities from Tara Oceans - TARA_B100002052 (ERX556103-ERR599100)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300020584	Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555983-ERR599011)	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029792	Marine giant viral communities collected during Tara Oceans survey from station TARA_041 - TARA_Y100000052	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2011_100876912	3300000115	Marine	VYDVKVKDAYIVLDIVGDPNDYEATEKTLKEITKDLKPFVKGKIYQGFSDGVKKFVKQRGGKV*
Ga0068511_10856561	3300005057	Marine Water	IVIDILGDPNDFDATDKVLKKIKKDLKKYTKGKILTGFADGVKKFVKQRGGKV*
Ga0066861_102771591	3300005522	Marine	IDIVGDPNDYDATEKALKQVKKDLKPFVKGKIYQGFADGVKMFVRRRGGKV*
Ga0098038_10322011	3300006735	Marine	AYIVIDIVGDPNDYDATEKALKQVKKDLKPFVKGKIYQGFASGVKKFVKQRGGKV*
Ga0098038_11369561	3300006735	Marine	ALKQVKKDLKPFVKGKIYQGFADGVKMFVRRRGGKV*
Ga0098037_11699602	3300006737	Marine	AYIVIDIVGDPNDYDATEKALKQVKKDLKPFVKGKIYQGFADGVKMFVRRRGGKV*
Ga0098042_11475832	3300006749	Marine	YNELLVYDTKVKDAYIVIDAVGDPNDFEATNKALDDIKKDLKPVVKGKIFTGFVDGVKKFIKKRGGKV*
Ga0098039_13150681	3300006753	Marine	KIKDAYIVIDVIGDPNDYETTQKAIKDITKDLKPYVKGKIFTGFASGVKKWIKKRGGKV*
Ga0098039_13341272	3300006753	Marine	IGDPNDYETTQKAIKDITKDLKPYVKGKIFTGFANGVKKFVKQRGGKV*
Ga0098044_13794832	3300006754	Marine	YNELLVYDVKVKDAYIVIDAVGDPNDFEATDKALDDIKKDLKPVVKGKIFTGFVNGVKKFIKQRGGKV*
Ga0098044_14086052	3300006754	Marine	DGICDPNEYETTQKAIKDIKKDLKPVVKGKIFTGFANGVKKWIKKRGGKV*
Ga0098041_10386791	3300006928	Marine	NDYDATEKALKQVKKDLKPFVKGKIYQGFASGVKKFVKQRGGKV*
Ga0098036_10524881	3300006929	Marine	VKVKDAYIVIDVIGDPNDFETTEKAIKDIKKDLKPVVKGKIFTGFADGVKKFIKKRGGKV
Ga0102854_11014782	3300009058	Estuarine	DPNDYDATEKALNQVKKDLKPFVKGKIFTGFMPGVKKFIKQRGGKV*
Ga0114902_11544852	3300009413	Deep Ocean	ELLVYDVKVKDAYIVLDIVGDPNDFEATEKTIKEIQKDLKPVVKGKIFTGFVDGVKKFIKQRGGKV*
Ga0114932_104860551	3300009481	Deep Subsurface	KDAYIVIDVIGDPNDFETTEKAIKDIKKDLKPVVKGKIFTGFVDGVKKFIKQRGGKV*
Ga0115013_103730532	3300009550	Marine	TDKALDDIKKDLKPVVKGKIFTGFVDGVKKFIKQRGGKV*
Ga0115011_107326071	3300009593	Marine	VYDVQIKDVYIVLDYVGDPNDFEATEKTIEGIKKDLKPYVKGKIYQGFASGVKMFVRRRGGKV*
Ga0115011_119058572	3300009593	Marine	LDIVGDPNDFDATDKAVNDIKKDLKRYVKGKIFTGFAGGVKKWIKQRGGKV*
Ga0115000_100680821	3300009705	Marine	IVLDIVGDPNDFDKTEKILEDIKKDLKPFVKGKIFTGFMPGVKKFIKQRGGKV*
Ga0115000_106311301	3300009705	Marine	NDYEATEKTIKNIKKDLNPFVKGKIFTGFASGAKTFIKQRGGKA*
Ga0098043_12209521	3300010148	Marine	LLVYDVKIKDAYIVIDVLGDPNDFDATEKVLKQIKKDLKPSVKGKIYQGFADGVKKFVKQRGGKV*
Ga0098056_11218381	3300010150	Marine	IVIDAVGDPNDFEATDKALDDIKKDLKPVVKGKIFTGFVDGVKKFIKQRGGKV*
Ga0098059_12073151	3300010153	Marine	AYIVIDAVGDPNDFEATDKALDDIKKDLKPVVKGKIFTGFVNGVKKFIKQRGGKV*
Ga0098059_12779902	3300010153	Marine	AYIVIDAVGDPNDFEATDKALDDIKKDLKPVVKGKIFTGFVDGVKKFIKQRGGKV*
Ga0098059_13876251	3300010153	Marine	FEATDKALNDIKKDLKPVVTGKIFTGFVDGVKKFIKKRGGKV*
Ga0133547_106154321	3300010883	Marine	PNDFDKTEKILEDIKKDLKPFVKGKIFTGFMPGVKKFIKQRGGKV*
Ga0114934_104441442	3300011013	Deep Subsurface	LVYDVKIKDAYIVIDILGDPNDYDATEAVLKKIKKDLKPYVKGKIYQGFADGVKKFVKQRGGKV*
Ga0151674_10029274	3300011252	Marine	KVKDAYIVIDAVGDPNDFKATDKALKDIKKDLKPFVKGKIFPGFSDGVKKFVKQRGGKV*
Ga0151671_10944201	3300011253	Marine	PNDFDATEAEIKKIKKDLKPFVKGKIYQGFVSGVKKFIKQRGGKV*
Ga0160422_104325712	3300012919	Seawater	FKATEKALKDIKKDLKPFVKGKIFTGFVDGVKKFIKKRGGKV*
Ga0160423_101262631	3300012920	Surface Seawater	LLVYDVKVKDAYIVIDAVGDPNDFEATDKALNDIKKDLKPFVKGKIYQGFASGVKKFVKQRGGKV*
Ga0160423_103488112	3300012920	Surface Seawater	VIDILGDPNDFDATDKVLKKIKKDLKKYTKGKIFTGFADGVKKFVKQRGGKV*
Ga0160423_110126612	3300012920	Surface Seawater	YDVKVKDAYIVIDILGDPNDFDATDKVLKKIKKDLKKYTKGKILTGFADGVKKFVKQRGGKV*
Ga0163109_114117851	3300012936	Surface Seawater	DKALNDVKKDLKPFVKGKIFTGFVDGVKKFIKKRGGKV*
Ga0181404_10309041	3300017717	Seawater	IVGDPNDYDATEKTIKEITKDLKPFVKGKIYQGFASGVKKFIKKRGGKV
Ga0181404_11221531	3300017717	Seawater	DYDKTEEIVDQIKKDLKPFVKGKIFTGFAQGVKKFVKQRGGKVX
Ga0181390_11302242	3300017719	Seawater	VYDVKVKDAYIVLDIVGDPNDYEATEKAIEGIKKDLKPFVKGKIYQGFSDGVKKFVKQRGGKV
Ga0181383_12057671	3300017720	Seawater	DVKVKDAYIVIDILGDPNDYDATDKVLKKIKKDLKKYTKGKILTGFVDGVKKFIKQRGGKVX
Ga0181383_12171321	3300017720	Seawater	AYIVLDIVGDPNDYDKTEEIVNQIKKDLKPFVKGKIYSGFMSGVKKFIKQRGGKV
Ga0181383_12193732	3300017720	Seawater	DPNDFDKTEKILEDIKKDLKPFVKGKIYQGFADGVKKFIKQRGGKVX
Ga0181388_10941402	3300017724	Seawater	DATEKALNQVKKDLKPFVKGKIFTGFAGGVKKFIKQRGGKV
Ga0181398_10264484	3300017725	Seawater	AYIVLDIVGDPNDYDATEKTIKEITKDLKPFVKGKIYQGFASGVKKFIKKRGGKV
Ga0181398_11198852	3300017725	Seawater	IVGDPNDYEATEKAIEGIKKDLKPFVKGKIYQGFSDGVKKFVKQRGGKV
Ga0181398_11451272	3300017725	Seawater	KDAYIVLDIVGDPNDYDATEKTIKEITKDLKPFVKGKIYQGFSDGVKKFVKQRGGKV
Ga0181381_11184902	3300017726	Seawater	DIVGDPNDYEATEKAIEGIKKDLKPFVKGKIYQGFADGVKKFVKQRGGKV
Ga0181419_10213212	3300017728	Seawater	LDIGGDPNDYDATEKTIKEITKDLKPFVKGKIYQGFASGVKMFVRRRGGKV
Ga0181419_10385051	3300017728	Seawater	KVKDAYIVLDIVGDPNDYEATEKTIKEIQKDLKPFVKGKIYQGFSDGVKKFVKQRGGKV
Ga0181419_10869232	3300017728	Seawater	ATDKALDDIKKDLKPVVKGKIFTGFVDGVKKFIKQRGGKV
Ga0181396_10172704	3300017729	Seawater	VKDAYIVLDIVGDPNDFEATEKTIKEITKNLKPFVKGKIYQGFASGVKKFIKKRGGKV
Ga0181396_10631442	3300017729	Seawater	LLVYDVKVKDAYIVLDIVGDPNDFDATEKAIEGIKKDLKPFVKGKIYQGFSDGVKKFVKQRGGKV
Ga0181417_10467732	3300017730	Seawater	ATEKAIEGIKKDLKPFVKGKIYQGFADGVKKFVKQRGGKV
Ga0181417_10937682	3300017730	Seawater	AYIVLDIVGDPNDYDATEKTIKEITKDLKPFVKGKIYQGFASGVKMFVRRRGGKV
Ga0181415_11601982	3300017732	Seawater	KDAYIVLDIVGDPNDYEATEKAIEGIKKDLKPFVKGKIYQGFASGVKMFVRRRGGKV
Ga0181426_10016361	3300017733	Seawater	EKERREATEKTIKEIQKDLKPFVKGKIYQGFSDGVKKFVKQRGGKV
Ga0181426_10171451	3300017733	Seawater	LDIVGDPNDYEATEKAIEGIKKDLKPFVKGKIYQGFADGVKKFVKQRGGKV
Ga0181428_10060001	3300017738	Seawater	VKDAYIVLDIVGDPNDYEATEKTIKEIQKDLKPFVKGKIYQGFSDGVKKFVKQRGGKV
Ga0181433_10849802	3300017739	Seawater	DPNDYEATEKAIEGIKKDLKPFVKGKIYQGFADGVKKFVKQRGGKV
Ga0181418_11832951	3300017740	Seawater	AYIVIDVIGDPNDYETTEKAIKDIKKDLKSVVKGKIFTGFADGVKKFIKKRGGKV
Ga0181421_10176411	3300017741	Seawater	VKDAYIVLDIVGDPNDFDATEKAIEGIKKDLKPFVKGKIYQGFADGVKKFVKQRGGKV
Ga0181399_10883721	3300017742	Seawater	VGDPNDYEATEKAIEGIKKDLKPYVKGKIFTGFAGGVKKWVKQRGGKI
Ga0181402_10248021	3300017743	Seawater	IRELLVYDVKVKDAYIVLDIVGDPNDFDATEKAIEGIKKDLKPFVKGKIYQGFADGVKKFVKQRGGKV
Ga0181397_10815452	3300017744	Seawater	AVGDPNDFEATDKALDDIKKDLKPVVKGKIFTGFVGGVKKFIKQRGGKV
Ga0181397_11474413	3300017744	Seawater	IDVIGDPNDYETTQKAIKDITKDLKPVVKGKIFTGFANGVKKFIKKRGGKV
Ga0181427_10158473	3300017745	Seawater	IVGDPNDYEATEKAIEGIKKDLKPFVKGKIYQGFADGVKKFVKQRGGKV
Ga0181392_11397902	3300017749	Seawater	YIVIDAVGDPNDFEATDKALDDIKKDLKPVVKGKIFTGFVDGVKKFIKQRGGKV
Ga0181400_11769041	3300017752	Seawater	LLVYDVKVKDAYIVLDIVGDPNDYEATEKAIEGIKKDLKPFVKGKIYQGFSDGVKKFVKQRGGKV
Ga0181407_10296274	3300017753	Seawater	VYDVKVKDAYIVLDIVGDPNDYDATEKTIKEITKNLKPFVKGKIYQGFASGVKKFIKKRGGKV
Ga0181407_11199772	3300017753	Seawater	VYDVKVKDAYIVLDIVGDPNDYDATEKTIKEITKDLKPFVKGKIYQGFSDGVKKFVKQRGGKV
Ga0181411_12106831	3300017755	Seawater	GDPNDYDKTEEIVNQIKKDLKPFVKGKIYQGFAGGVKKFVKQRGGKV
Ga0181382_10053171	3300017756	Seawater	DIVGDPNDYEATEKTIKEIQKDLKPFVKGKIYQGFSDGVKKFVKQRGGKV
Ga0181420_10884161	3300017757	Seawater	LLVYDVKIKDAYIVIDVLGDPNDFEATEKVLKQIKKDLKPYVKGKIYQGFADGVKKFIKQRGGKV
Ga0181420_12047911	3300017757	Seawater	LVYDVKVKDAYIVIDILGDPNDFEATESVLKKIKKDLKRYTKGKIFTGFADGVKKFVKQRGGKV
Ga0181408_10660053	3300017760	Seawater	VIDAVGDPNDFEATDKALDDIKKDLKPVVKGKIFTGFVDGVKKFIKQRGGKV
Ga0181408_11159492	3300017760	Seawater	VGDPNDFEATDKALDDIKKDLKPVVKGKIFTGFVGGVKKFIKQRGGKV
Ga0181422_12596411	3300017762	Seawater	VGDPNDFEATDKALDDIKKDLKPVVKGKIFTGFVDGVKKFVKQRGGKV
Ga0181410_11212072	3300017763	Seawater	IVGDPNDYDATEKTIKEITKDLKPFVKGKIYQGFSDGVKKFVKQRGGKV
Ga0181410_11288963	3300017763	Seawater	KALDDIKKDLKPVVKGKIFTGFVDGVKKFIKQRGGKV
Ga0181413_12307902	3300017765	Seawater	DVKIKDAYIVIDVLGDPNDFEATEKVLKQIKKDLKPYVKGKIYQGFADGVKKFIKQRGGK
Ga0187220_10161131	3300017768	Seawater	YIVLDIVGDPNDFDATEKAIEGIKKDLKPFVKGKIYQGFADGVKKFVKQRGGKV
Ga0187217_12831062	3300017770	Seawater	KVKDAYIVLDIVGDPNDYEATEKTIKEIQKDLKPFVKGKIFTGFAGGVKKFIKQRGGKV
Ga0181425_10229965	3300017771	Seawater	AYIVLDIVGDPNDYEATEKTIKEIQKDLKPFVKGKIYQGFSDGVKKFVKQRGGKV
Ga0181425_10724553	3300017771	Seawater	YDVKVKDAYIVLDIVGDPNDYDATEKTIKEITKDLKPFVKGKIYQGFASGVKKFIKKRGGKVXLN
Ga0181430_10659681	3300017772	Seawater	IDIVGDPNDYDATEKALNQVKKDLKPFVKGKIFTGFAGGVKKFVKQRGGKV
Ga0181430_10859061	3300017772	Seawater	DKALDDIKKDLKPVVKGKIFTGFVGGVKKFIKQRGGKV
Ga0181386_10117918	3300017773	Seawater	DPNDFEATDKALDDIKKDLKPVVKGKIFTGFVGGVKKFIKQRGGKV
Ga0181432_13055931	3300017775	Seawater	IQKQLKFIKKLLKPYVKGKIYSGFVSGVKKFVKQRGGKV
Ga0181394_100337116	3300017776	Seawater	AYIVLDIVGDPNDYDKTEGIVNQIKKDLKPFVKGKIYQGFSDGVKKFVKQRGGKV
Ga0181394_11003561	3300017776	Seawater	ATDKALDDIKKDLKPVVKGKIFTGFVDGVKKFIKQRGGKVXLN
Ga0181395_11840712	3300017779	Seawater	YIVIDAVGDPNDFEATDKALDDIKKDLKPVVKGKIFTGFVGGVKKFIKQRGGKV
Ga0181424_102733412	3300017786	Seawater	VGDPNDYDATEKALNQVKKDLKPFVKGKIFTGFAGGVKKFIKQRGGKV
Ga0181569_103911951	3300017986	Salt Marsh	KDAYIVIDILGDPNDYEATESVLKKIKKDLKKYTKGKIFTGFADGVKKFVKQRGGKV
Ga0181572_109162032	3300018049	Salt Marsh	VLDIVGDPNDFEATEKTIKEITKDLKPFVKRKIYQGFADGVKMFVRRRGGKV
Ga0211589_10500471	3300020315	Marine	VKDAYLVLDALGDPNDFEATESVIKKIKKDLKPFVKGKIYQGFADGVKKFVKQRGGKV
Ga0211477_102450311	3300020374	Marine	DPNDFEATDKALDDIKKDLKPVVKGKIFTGFVDGVKKFIKQRGGKV
Ga0211587_104316822	3300020411	Marine	YDIQVKDAYIVIDAVGDPNDFNTTEKVLKKIKKDLKPYVNGKIYTGFADGVKKFVKKRGGKV
Ga0211556_104752721	3300020432	Marine	LLVYDVKVKDAYLVLDNLGDPNDFEATESVIKKIKKDLKPFVKGKIFTGFVSGVKKFIKQRGGKV
Ga0211576_104710051	3300020438	Marine	VYDVKVKDAYIVLDIVGDPNDYEATEKAIEGIKKDLKPFVKGKIYQGFSDGVKKFVKQRGGKVXYI
Ga0211543_106021512	3300020470	Marine	VKDAYIVIDVVGDPNDFNATEKAISDIKKDLKPFVKGKIYQGFADGVKKFVKQRGGKV
Ga0211547_105977191	3300020474	Marine	AYIVIDVIGDPNDFETTEKAIKDIKKDLKPVVKGKIFTGFADGVKKFLKKRGGKV
Ga0211540_10573921	3300020584	Marine	VKDAYIVIDILGDPNDFDATDKVLKKIKKDLKKYTKGKILTGFADGVKKFVKQRGGKV
Ga0209992_101953601	3300024344	Deep Subsurface	NDFETTEKAIKDIKKDLKPVVKGKIFTGFADGVKKFIKKRGGKV
Ga0208159_10374951	3300025101	Marine	NELLVYDVKVKDAYIVIDAVGDPNDFEATNKALDDIKKDLKPVVKGKIFTGFVDGVKKFIKKRGGKVX
Ga0208793_11663001	3300025108	Marine	DVKVKDAYIVIDAVGDPNDFEATDKALDDIKKDLKPVVTGKIFTGFVDGVKKFIKKRGGK
Ga0209535_11221742	3300025120	Marine	YDATEKALNQVKKDLKPFVKGKIFTGFAGGVKKFIKQRGGKV
Ga0208919_12602371	3300025128	Marine	AVGDPNDFEATDKALDDIKKDLKPVVKGKIFTGFVDGVKKFIKKRGGKV
Ga0209232_11922111	3300025132	Marine	PNDYEATEKALKQVKKDLKPFVKGKIYQGFASGVKMFVRRRGGKV
Ga0183748_10425571	3300029319	Marine	DPNNFDATEAEIKKIKKDLKPFVKGKIYQGFADGVKKFVKKRGGKV
Ga0183748_11167112	3300029319	Marine	NELLVYDVKVKDAYIVIDILGDPNDYDATDKVLKKIKKDLKKYTKGKIFTGFADGVKKFVKQRGGKV
Ga0183826_10646552	3300029792	Marine	KDVYIVIDLVGDPNDYETTEKALSDIKKDLKPFVKGKIFTGFVDGVKKFIKKRGGKV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087053

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences