Metagenome Family F087343

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F087343
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	70 residues
Representative Sequence	MAVYRIYLVHDDGRLQPDESFYCKTDVEAVARLRPPARADIRAELWQGGRFIAVAGSLRRPGEARPHATR
Number of Associated Samples	77
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.09 %
% of genes near scaffold ends (potentially truncated)	13.64 %
% of genes from short scaffolds (< 2000 bps)	70.91 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere (14.546 % of family members)
Environment Ontology (ENVO)	Unclassified (58.182 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.12% β-sheet: 31.63% Coil/Unstructured: 62.24%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.61.1.1: LigT-like	d1jh6a_	1jh6	0.77
c.77.1.2: Isocitrate/Isopropylmalate dehydrogenase-like	d2b0ta_	2b0t	0.68
b.1.1.1: Immunoglobulin	d1tvda_	1tvd	0.65
d.61.1.0: LigT-like	d5h7fa_	5h7f	0.65
b.1.1.1: Immunoglobulin	d2ap2a1	2ap2	0.64

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00903	Glyoxalase	13.64
PF09360	zf-CDGSH	9.09
PF12681	Glyoxalase_2	7.27
PF11730	DUF3297	4.55
PF07589	PEP-CTERM	4.55
PF02518	HATPase_c	4.55
PF00196	GerE	1.82
PF06186	DUF992	0.91
PF05299	Peptidase_M61	0.91
PF02965	Met_synt_B12	0.91
PF02771	Acyl-CoA_dh_N	0.91
PF14559	TPR_19	0.91
PF02803	Thiolase_C	0.91
PF08448	PAS_4	0.91
PF16313	DUF4953	0.91
PF07676	PD40	0.91
PF02678	Pirin	0.91
PF12840	HTH_20	0.91
PF04116	FA_hydroxylase	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.91
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	0.91
COG1410	Methionine synthase I, cobalamin-binding domain	Amino acid transport and metabolism [E]	0.91
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.91
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.91
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.91
COG3975	Predicted metalloprotease, contains C-terminal PDZ domain	General function prediction only [R]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	94.55 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	87.27 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	53.64 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	53.64 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.91 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	50.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.91 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Phenylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium	44.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.91 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Phenylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	44.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.91 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.91 %
Unclassified	root	N/A	0.91 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10886798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	539	Open in IMG/M
3300005327\|Ga0070658_10097896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2422	Open in IMG/M
3300005327\|Ga0070658_10109738	All Organisms → cellular organisms → Bacteria	2284	Open in IMG/M
3300005327\|Ga0070658_10257209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1482	Open in IMG/M
3300005327\|Ga0070658_10539769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1009	Open in IMG/M
3300005327\|Ga0070658_11658241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300005329\|Ga0070683_101162576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	741	Open in IMG/M
3300005331\|Ga0070670_101514966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	616	Open in IMG/M
3300005335\|Ga0070666_11145226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	579	Open in IMG/M
3300005336\|Ga0070680_100218614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1608	Open in IMG/M
3300005339\|Ga0070660_100857673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300005366\|Ga0070659_100000700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24395	Open in IMG/M
3300005456\|Ga0070678_100829486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	841	Open in IMG/M
3300005529\|Ga0070741_10146275	All Organisms → cellular organisms → Bacteria	2384	Open in IMG/M
3300005529\|Ga0070741_11291306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	611	Open in IMG/M
3300005530\|Ga0070679_100161448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	2215	Open in IMG/M
3300005530\|Ga0070679_100914003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	821	Open in IMG/M
3300005535\|Ga0070684_100647832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	983	Open in IMG/M
3300005537\|Ga0070730_10000200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	76728	Open in IMG/M
3300005537\|Ga0070730_10739831	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300005539\|Ga0068853_100511808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1134	Open in IMG/M
3300005543\|Ga0070672_101559652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	592	Open in IMG/M
3300005555\|Ga0066692_10417377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	852	Open in IMG/M
3300005563\|Ga0068855_102537129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	509	Open in IMG/M
3300005616\|Ga0068852_102423258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	545	Open in IMG/M
3300005840\|Ga0068870_10432810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	863	Open in IMG/M
3300005841\|Ga0068863_101160473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	778	Open in IMG/M
3300005944\|Ga0066788_10124038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	648	Open in IMG/M
3300006028\|Ga0070717_10114003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2309	Open in IMG/M
3300006028\|Ga0070717_10137847	All Organisms → cellular organisms → Bacteria → Proteobacteria	2102	Open in IMG/M
3300006237\|Ga0097621_101684239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	604	Open in IMG/M
3300006881\|Ga0068865_100010326	All Organisms → cellular organisms → Bacteria → Proteobacteria	5808	Open in IMG/M
3300009093\|Ga0105240_10013359	All Organisms → cellular organisms → Bacteria → Proteobacteria	11280	Open in IMG/M
3300009093\|Ga0105240_10031159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	6920	Open in IMG/M
3300009093\|Ga0105240_11417045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	730	Open in IMG/M
3300009093\|Ga0105240_11747544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	649	Open in IMG/M
3300009098\|Ga0105245_11251392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	790	Open in IMG/M
3300009174\|Ga0105241_11214721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	715	Open in IMG/M
3300009551\|Ga0105238_11019280	All Organisms → cellular organisms → Bacteria → Proteobacteria	849	Open in IMG/M
3300009551\|Ga0105238_12354675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300009686\|Ga0123338_10319785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	673	Open in IMG/M
3300010371\|Ga0134125_10142740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2666	Open in IMG/M
3300010371\|Ga0134125_11860210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	654	Open in IMG/M
3300010371\|Ga0134125_12165871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	605	Open in IMG/M
3300010373\|Ga0134128_10289676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1835	Open in IMG/M
3300010373\|Ga0134128_12596562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	558	Open in IMG/M
3300010375\|Ga0105239_12051364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	664	Open in IMG/M
3300010375\|Ga0105239_13508301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	510	Open in IMG/M
3300010376\|Ga0126381_102578693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	728	Open in IMG/M
3300010396\|Ga0134126_10193528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2437	Open in IMG/M
3300013100\|Ga0157373_11286922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	553	Open in IMG/M
3300013104\|Ga0157370_10424089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1224	Open in IMG/M
3300013306\|Ga0163162_10753361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1093	Open in IMG/M
3300013307\|Ga0157372_11022611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	957	Open in IMG/M
3300014325\|Ga0163163_10070174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3489	Open in IMG/M
3300014969\|Ga0157376_11090515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	824	Open in IMG/M
3300015206\|Ga0167644_1016758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3350	Open in IMG/M
3300015242\|Ga0137412_11225063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	526	Open in IMG/M
3300020034\|Ga0193753_10056104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	2090	Open in IMG/M
3300021170\|Ga0210400_10000243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65547	Open in IMG/M
3300021403\|Ga0210397_11559849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300021404\|Ga0210389_10072296	All Organisms → cellular organisms → Bacteria → Proteobacteria	2645	Open in IMG/M
3300021404\|Ga0210389_10478618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	980	Open in IMG/M
3300021475\|Ga0210392_10465047	Not Available	929	Open in IMG/M
3300025903\|Ga0207680_10472633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	891	Open in IMG/M
3300025903\|Ga0207680_10757219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	696	Open in IMG/M
3300025909\|Ga0207705_10003940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11287	Open in IMG/M
3300025909\|Ga0207705_10244064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1369	Open in IMG/M
3300025909\|Ga0207705_10692760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	792	Open in IMG/M
3300025909\|Ga0207705_10918333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	678	Open in IMG/M
3300025912\|Ga0207707_10126675	All Organisms → cellular organisms → Bacteria	2233	Open in IMG/M
3300025913\|Ga0207695_10003616	All Organisms → cellular organisms → Bacteria → Proteobacteria	21617	Open in IMG/M
3300025913\|Ga0207695_10078886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	3339	Open in IMG/M
3300025913\|Ga0207695_10144022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	2329	Open in IMG/M
3300025913\|Ga0207695_10299893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1498	Open in IMG/M
3300025913\|Ga0207695_10714800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	882	Open in IMG/M
3300025920\|Ga0207649_10960192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300025921\|Ga0207652_10451434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1159	Open in IMG/M
3300025924\|Ga0207694_10838156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	777	Open in IMG/M
3300025924\|Ga0207694_11357596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	601	Open in IMG/M
3300025927\|Ga0207687_11078938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	689	Open in IMG/M
3300025932\|Ga0207690_10000220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	43152	Open in IMG/M
3300025941\|Ga0207711_10000882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	28942	Open in IMG/M
3300025972\|Ga0207668_11172226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300025981\|Ga0207640_10441242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1070	Open in IMG/M
3300026041\|Ga0207639_10245891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1558	Open in IMG/M
3300026041\|Ga0207639_10399890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1237	Open in IMG/M
3300026067\|Ga0207678_11340203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	633	Open in IMG/M
3300026088\|Ga0207641_10620487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1060	Open in IMG/M
3300026095\|Ga0207676_10686648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	991	Open in IMG/M
3300026142\|Ga0207698_11030917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	834	Open in IMG/M
3300026142\|Ga0207698_11082700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	814	Open in IMG/M
3300026334\|Ga0209377_1179619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	742	Open in IMG/M
3300026555\|Ga0179593_1085075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	2229	Open in IMG/M
3300027378\|Ga0209981_1002396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	2384	Open in IMG/M
3300027574\|Ga0208982_1078844	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300027857\|Ga0209166_10000965	All Organisms → cellular organisms → Bacteria → Proteobacteria	26284	Open in IMG/M
3300030520\|Ga0311372_10320995	All Organisms → cellular organisms → Bacteria → Proteobacteria	2424	Open in IMG/M
3300030520\|Ga0311372_11214342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	964	Open in IMG/M
3300031910\|Ga0306923_11037958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	888	Open in IMG/M
3300031938\|Ga0308175_100029361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4520	Open in IMG/M
3300031938\|Ga0308175_100389417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1452	Open in IMG/M
3300031938\|Ga0308175_101799502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	686	Open in IMG/M
3300031939\|Ga0308174_10006456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6411	Open in IMG/M
3300031939\|Ga0308174_10227809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1436	Open in IMG/M
3300031939\|Ga0308174_10345942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1184	Open in IMG/M
3300032074\|Ga0308173_10354326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1279	Open in IMG/M
3300032174\|Ga0307470_11703572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	531	Open in IMG/M
3300033180\|Ga0307510_10003000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	19429	Open in IMG/M
3300034268\|Ga0372943_0140734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1458	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	56.36%
Environmental	Environmental	43.64%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	56.36%
Terrestrial	Environmental → Terrestrial	42.73%
Aquatic	Environmental → Aquatic	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	39.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.55%
Roots	Host-Associated → Plants → Roots	2.73%
Peat	Environmental → Terrestrial → Peat	1.82%
Freshwater	Environmental → Aquatic → Freshwater	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	18.18%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.64%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.82%
Ice	Environmental → Aquatic → Freshwater → Ice	0.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.91%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.91%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	18.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.27%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.82%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.82%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	0.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	14.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	12.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.36%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.82%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Glacier Valley	Environmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.91%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.91%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.91%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009686	Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - groundupSSSS metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027378	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_108867981	3300004633	Tropical Forest Soil	MAVYRIYLVHDDGRLDPDASFYCKEDAEAVRRLAPPDRPDVRAELWQGGRLIAVAGTRRRGAYPGQAAVET*
Ga0070658_100978964	3300005327	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDASFYCARDEEAIVRLRPPGRADVRAELWQGGRFIAVAGTIHRHAGGHPHPGG*
Ga0070658_101097383	3300005327	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDESFYCARDEEAIIRLRPPGSANTRAELWQGGRFIAVAGTIHPHAGAHPHPGG*
Ga0070658_102572092	3300005327	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDVSFYCKSDDEALGRLRPPHFQDVRAALWQGGRFIAVAGHARRRGGAMWPGLNP*
Ga0070658_105397692	3300005327	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDESFYCTSDEDAVVRLRPPPRADLRAELWQGGRFIAVAGSRRAQVEDRPLPH*
Ga0070658_116582412	3300005327	Corn Rhizosphere	MAVYRIYLVHDDGRLEPDASYYCTTDEEAVSRLRPPPRSDIRAELWQGGRFVAVAGSLRARPQDRPLAP*
Ga0070683_1011625761	3300005329	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDESFYCARDEEAIVRLRPPQRADIRAELWQGGRFIAVAGTIHPHAGRHPHPGG*
Ga0070670_1015149662	3300005331	Switchgrass Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCREDLEALRRLRAPHRDDIRAELWQGGRLIAVAGSRRSRGGGAGVEANP*
Ga0070666_111452261	3300005335	Switchgrass Rhizosphere	YLVHDDGRLEPDESFYCREDLEALRRLRAPNRDDIRAELWQGGRLIAVAGSRRPRGGGAGVEANP*
Ga0070680_1002186142	3300005336	Corn Rhizosphere	MAVYRIYRVHDDGRLEPAESFYCKTDAEAVGRLTPPARADVRAELWQGGRFVGAAGHTRRPGEERPHATP*
Ga0070660_1008576732	3300005339	Corn Rhizosphere	TMAVYRIYLVHDDGRLEPDESFYCTTDYEAVVRLRPPGREDIRAELWQGGRFIAAAGYLRPRSDERPRAIG*
Ga0070659_10000070020	3300005366	Corn Rhizosphere	MAVYRIYLVHDDGRLQADASFYCARDEEAIVRLRPPGRADIRAELWQGGRFIAVAGTIRRHAGEHPHPAG*
Ga0070678_1008294861	3300005456	Miscanthus Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCTTDYEAVVRLRPPGREDIRAELWQGGRFIAAAGYLRPRSDERPRAIG*
Ga0070741_101462756	3300005529	Surface Soil	MPVYRIYLVHDDGRLEPDESFYVKEDAEAVRRLAPPGRADVRAELWQGGRLIAVAGTRRRSEPLEGRPQAEF*
Ga0070741_112913061	3300005529	Surface Soil	MPVYRIYLVHDDGRLEPDASFYVKADVEAVRRLSAPERPDVRAELWQGGRLVAVAGTRRRPGPLAPNRDAGL*
Ga0070679_1001614484	3300005530	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDASFYCARDEEAIVRLRPPGRADVRAELWQGGRFIAVAGTI
Ga0070679_1009140031	3300005530	Corn Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCTTDYEAVVRLRPPGREDIRAELWQGGRFIAAAGYLRPRSDERPRATG*
Ga0070684_1006478322	3300005535	Corn Rhizosphere	MPVYRIYLVHDDGRLEPDESFYTKEDMDAVRHLHAPERPDVRAELWQGGRLIAVAGTRRRGGSIGPDLNVGL*
Ga0070730_1000020028	3300005537	Surface Soil	MAVYRIYLVHDDGRLEPAESFYCTADAEAVSRIVPPSRPDIRAELWQGGRFIAAAGHRSRPAVGERPHAG*
Ga0070730_107398311	3300005537	Surface Soil	MAVYRIYLVHDDGRLEPDESFYCKTDCEAVNRLRRPTRADIRAELWQGGRFVAVAGSHRPPADDRPYVTH*
Ga0068853_1005118083	3300005539	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDASFYCARDEDAIVRLRPPGRADVRAELWQGGRFIAVAGTVRRHGFAHPHPAG*
Ga0070672_1015596521	3300005543	Miscanthus Rhizosphere	MAVYRIYMVHDDGRLEPGDSFYCHGDDEAVGRLPTPSRVDLRTELWQGGRFIAAAGYRRRPDPDIRPIALG*
Ga0066692_104173772	3300005555	Soil	MAIYRIYLVHDDGRLQPDESFYCKTDEEAVRKLRPPGQVDLRAELWQGGRFVGAAGHIRRRPDDRPRAVG*
Ga0068855_1025371292	3300005563	Corn Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCITDAEAVGRLRPPVEADVRAELWQGGRFVAVAGSLRRPGAEARPRPAG*
Ga0068852_1024232582	3300005616	Corn Rhizosphere	MPVYRIYLVHDEGRLEPDESFYTKEDMDAVRHLHAPERPDVRAELWQGGRLIAVAGTRRRGGSIGPDLNVGL*
Ga0068870_104328102	3300005840	Miscanthus Rhizosphere	MAVYRIYLVHDDGRLEPAESFYCKSDVEAVSHLWPPPREDIRAELWQGGRFVGAAGSMRRHVSDRPHATG*
Ga0068863_1011604732	3300005841	Switchgrass Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCKEDFEALRRLRAPGREDIRAELWQGGRLIAVAGSRRSRGMDSGVEARR*
Ga0066788_101240381	3300005944	Soil	MAVYRIYLVHDDGRLEPDASFYCRSDEEAASKLRPPPRADIRAELWQGGRFIAVAGSRRARGEDRPPHGSAHTR*
Ga0070717_101140032	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCKTDEEAVVRLRPPGPLDVRAELWQGGRFIAVAGSVRRPGAEEPARV*
Ga0070717_101378472	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAVYRIYLVHDDGRLEPDDAFYCKTDEEAVRRLAPPTRQDVRAELWQGGRFIAIAGHLRQPSRADARPNAVG*
Ga0097621_1016842392	3300006237	Miscanthus Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCREDFEALRRLRAPHREDIRAELWQGGRLIAVAGSRRS
Ga0068865_1000103264	3300006881	Miscanthus Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCREDLEALRRLRAPNRDDIRAELWQGGRLIAVAGSRRPRGGGAGVEANP*
Ga0105240_100133593	3300009093	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDESFYCTTDEDAVVRLRPPPRPDMRAELWQGGRFVAVAGRRRVHVEDRPLPR*
Ga0105240_100311597	3300009093	Corn Rhizosphere	MAVYRIYLVHDDGRLEPAESFYCKSDDEAVAHLKPPTRPDVRAELWQGGRFVGVAGSMRRRGGDQPHVTG*
Ga0105240_114170452	3300009093	Corn Rhizosphere	MAVYRIYLVHDDGRLEPGESFYCTTDEEALARIAPPSRPDIRAELWQGGRFIAAAGSRRRRAEDPAHPG*
Ga0105240_117475441	3300009093	Corn Rhizosphere	MAVYRIYLVHDDGRLEPDESSYCREDLEALRRLRAPNRDDIRAELWQGGRLIAVAGSRRPRGGGAGVEANP*
Ga0105245_112513921	3300009098	Miscanthus Rhizosphere	MAVYRIYLVHDDGRLAPDKSFYCATDEEAVSKLSPPRRADIRAELWQGGRFVAVAGSRRAQAEGRPLSR*
Ga0105241_112147213	3300009174	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDESFYCKTDEEAVVRLHPPGPRDVRAELWQGGRFIAIAGSLRRPGAEERPRA*
Ga0105238_110192801	3300009551	Corn Rhizosphere	MAVYRIYLVHDDGRLEPDASYYCTTDEEAVSRLRPPPRSDIRAELWQGGRFVAVAGSLRARPEDRPLAP*
Ga0105238_123546751	3300009551	Corn Rhizosphere	VYRIYLVHDDGRLQPDESFYCTTDEDAVVRLRPPPRPDMRAELWQGGRFIAVAGTIHPHAGAHPHPGG*
Ga0123338_103197852	3300009686	Glacier Valley	MAVYRIYLVHDDGRLQPDESFYCVTDDEAVGRFRPPSRDDLRAELWQGGRFIAAAGRIRHEVASRPHATG*
Ga0134125_101427404	3300010371	Terrestrial Soil	MAVYRIYLVHDDGRLQPDESFYCARDEEAMVRLRPPGRADVRAELWQGGRLIAVAGTLRRHAGSDPHPGSYS*
Ga0134125_118602101	3300010371	Terrestrial Soil	MPVYRIYLVDDDGHLDPHESFYCKADDEAVRRLSAPHRPEIRAELWQGGRLVAVAGTRRR
Ga0134125_121658712	3300010371	Terrestrial Soil	MAVYRIYLVHDDGRLQPDESFYCKTDVEAVARLRPPARADIRAELWQGGRFIAVAGSLRRPGEARPHATR*
Ga0134128_102896764	3300010373	Terrestrial Soil	MPVYRIYLVDDDGHLDPHESFYCKADDEAVRRLSAPNRPEIRAELWQGGRLVAVAGTRRRPGPLDLHLGPES*
Ga0134128_125965621	3300010373	Terrestrial Soil	ARSLVMPVYRIYLVDDDGRLEPDESFYCKADAEAVRRLSAPDRAEIRAELWQGGRLVAVAGTRRRRGPLDLRLGPEP*
Ga0105239_120513641	3300010375	Corn Rhizosphere	MAVYRIYLVHDDGRLEPAESFYCKSDVEAVSHLRPPPREDIRAELWQGGRFVGAAGSMRRHVSDRPHATG*
Ga0105239_135083012	3300010375	Corn Rhizosphere	MPVYRIYLVHDDGRLEPDESFYCTTDQEAVARLKPPGREDIRSELWQGGRFIAAAGYLRR
Ga0126381_1025786931	3300010376	Tropical Forest Soil	MPVYRIYLVHDDGRLEPDESFYCKEDVEAVRKLSPPARADVRAELWQGGRMVAMAGTRRRQGPIDLDLGAGP*
Ga0134126_101935284	3300010396	Terrestrial Soil	MAVYRIYLVHDDGRLQPDESFYCTTDEEAVGKLHPPRRADARAELWQGGRLIAVAGSRRVKAEGAPLFR*
Ga0157373_112869221	3300013100	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDASFYCARDEEAIVRLRPPGRADVRAELWQGGRFVGAAGHTRRPGEERPHATP*
Ga0157370_104240893	3300013104	Corn Rhizosphere	MAVYRIYRVHDDGRLEPAESFYCKTDAEAVGRLTPPARADVRAELWQGGRFIAVAGTIHRHAGGHPHPGG*
Ga0163162_107533612	3300013306	Switchgrass Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCTTDYEAVARLRPPGREDIRAELWQGGRFIAAAGYLRPRSDERPRAIG*
Ga0157372_110226112	3300013307	Corn Rhizosphere	MPVYRIYLVHDDGRLEPDESFYTKEDMDAVRRLHAPERPDVRAELWQGGRLIAVAGTRRRGGSIGPDLNVGL*
Ga0163163_100701744	3300014325	Switchgrass Rhizosphere	MAVYRIYLVHGDGRLEPDESFYCRTDEEAVGKLRPSPRADVRTELWQGGRFIAVAGHVRRRPEIHPFAPI*
Ga0157376_110905152	3300014969	Miscanthus Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCREDFEALRRLQSPSREDIRAELWQGGRLIAVAGSRRSHGASAGTEAAP*
Ga0167644_10167585	3300015206	Glacier Forefield Soil	MAVYRIYLVHDDGRLQPDESFFCKTDEEAVRRLAPPLRADIRAELWQGGRFIAIAGSRRTPTDDRPYAAG*
Ga0137412_112250631	3300015242	Vadose Zone Soil	MAVYRIYLVHDDGRLEPDKSFYCKTDEEAVVRLRPPGPLDVRAELWQGGRFIAIAGSLRRPGAEERARAAP*
Ga0193753_100561043	3300020034	Soil	MAIYRIYLVHNDGRLQPDESFYCKTDEDAVTKLSPPARADVRAELWQGGRFIATAGPGRRPSDDRPHAPG
Ga0210400_1000024362	3300021170	Soil	MAVYRIYLVHDDGRLEPDESFYCKTDCEAVNRLRRPTRADIRAELWQGGRFVAVAGSHRPPADDRPYVTH
Ga0210397_115598491	3300021403	Soil	YRIYLVHEDGRLEPDASFYCTTDEEAVCKLHHPPRADVRAELWQGGRFIAVAGQVRRRPGAGPGSVHV
Ga0210389_100722963	3300021404	Soil	MAVYRIYLVHDDGRLEPDESFYCKLDEEAVARLRPPGRADIRAELWQGGRFIAAAGHARRRPPGRPDDRPHTAG
Ga0210389_104786182	3300021404	Soil	MAVYRIYLVHEDGRLEPDASFYCTTDEEAVCKLHHPPSARVRAELWQGGRFIAVAGRVRRRPDEGERSVHA
Ga0210392_104650472	3300021475	Soil	MAVYRVYLVHDDGRLEPDVSFYCASDQEAVARLEPPPRADIRAELWQGGRYIAVAGRRRPPMGGPTQVFG
Ga0207680_104726332	3300025903	Switchgrass Rhizosphere	MAVYRIYLVHDDGRLQPDESFYCNSDEDAVVRLRPPGRTDIRAELWQGGRFIGAAGTLGPNVRNFPHPV
Ga0207680_107572192	3300025903	Switchgrass Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCREDLEALRRLRAPNRDDIRAELWQGGRLIAVAGSRRPRGGGAGVEANP
Ga0207705_1000394010	3300025909	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDASFYCARDEEAIVRLRPPGRADVRAELWQGGRFIAVAGTIHRHAGGHPHPGG
Ga0207705_102440641	3300025909	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDESFYCARDEEAIIRLRPPGSANTRAELWQGGRFIAVAGT
Ga0207705_106927602	3300025909	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDVSFYCKSDDEALGRLRPPPCEDVRAELWQGGRFIAVAGHARRRGGAMWPGLNP
Ga0207705_109183332	3300025909	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDESFYCTSDEDAVVRLRPPPRADLRAELWQGGRFIAVAGSRRAQVEDRPLPH
Ga0207707_101266754	3300025912	Corn Rhizosphere	MAVYRIYRVHDDGRLEPAESFYCKTDAEAVGRLTPPARADVRAELWQGGRFVGAAGHTRRPGEERPHATP
Ga0207695_100036163	3300025913	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDESFYCTTDEDAVVRLRPPPRPDMRAELWQGGRFVAVAGRRRVHVEDRPLPR
Ga0207695_100788865	3300025913	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDESFYCARDEEAIIRLRPPGSANTRAELWQGGRFIAVAGTIHPHAGAHPHPGG
Ga0207695_101440222	3300025913	Corn Rhizosphere	MAVYRIYLVHDDGRLEPAESFYCKSDDEAVAHLKPPTRPDVRAELWQGGRFVGVAGSMRRRGGDQPHVTG
Ga0207695_102998933	3300025913	Corn Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCITDAEAVGRLRPPVEADVRAELWQGGRFVAVAGSLRRPGAEARPRPAG
Ga0207695_107148001	3300025913	Corn Rhizosphere	MPVYRIYLVHDDGRLEPDESFYTKEDMDAVRHLHAPERPDVRAELWQGGRLIAVAGTRRRGGSIGPDLNVGL
Ga0207649_109601922	3300025920	Corn Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCREDSEALRRLRAPARVDVRAELWQGGRLIAVAGSRRRGRGASGAEAGRKDLSA
Ga0207652_104514342	3300025921	Corn Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCTTDYEAVVRLRPPGREDIRAELWQGGRFIAAAGYLRPRSDERPRATG
Ga0207694_108381562	3300025924	Corn Rhizosphere	MAVYRIYLVHDDGRLAPDKSFYCATDEEAGSKLSPPRRADIRAELWQGGRFVAVAGSRRAQAEGRPLSR
Ga0207694_113575962	3300025924	Corn Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCREDLEALRRLRAPHRDDIRAELWQGGRLIAVAGSRRSRGGGAGVEANP
Ga0207687_110789381	3300025927	Miscanthus Rhizosphere	MAVYRIYLVHDDGRLAPDKSFYCATDEEAVSKLSPPRRADIRAELWQGGRFVAVAGSRRAQAEGRPLSR
Ga0207690_1000022030	3300025932	Corn Rhizosphere	MAVYRIYLVHDDGRLQADASFYCARDEEAIVRLRPPGRADIRAELWQGGRFIAVAGTIRRHAGEHPHPAG
Ga0207711_1000088227	3300025941	Switchgrass Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCKTDEEAVVRLHPPGPLDVRAELWQGGRFIAIAGSLRRPGAEERPRV
Ga0207668_111722261	3300025972	Switchgrass Rhizosphere	IYLVHDDGRLEPDESFYCREDLEALRRLRAPNRDDIRAELWQGGRLIAVAGSRRPRGGGAGVEANP
Ga0207640_104412422	3300025981	Corn Rhizosphere	MAVYRIYRVHDDGRLEPAETFYCKTDAEAVGRLTPPARADVRAELWQGGRFVGAAGHTRRPGEERPHATP
Ga0207639_102458913	3300026041	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDASFYCARDEDAIVRLRPPGRADVRAELWQGGRFIAVAGTVRRHGFAHPHPAG
Ga0207639_103998901	3300026041	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDESFYCARDEEAIVRLRPPQRADIRAELWQGGRFIAVAGTIHPHAGRHPHPGG
Ga0207678_113402031	3300026067	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDESFYCARDEEAIIRLRPPGSANTRAELWQGGRFIAVAGTIHRHAGGHPHPGG
Ga0207641_106204872	3300026088	Switchgrass Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCKEDFEALRRLRAPGREDIRAELWQGGRLIAVAGSRRSRGMDSGVEARR
Ga0207676_106866481	3300026095	Switchgrass Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCREDYEALRRLRAPSRDDIRAELWQGGRLIAVAGTRRARGAGAGAQATP
Ga0207698_110309171	3300026142	Corn Rhizosphere	MAVYRIYLVHDDGRLEPDESFYCREDSEALRRLRAPARVDVRAELWQGGRLIAVAGS
Ga0207698_110827001	3300026142	Corn Rhizosphere	MAVYRIYLVHDDGRLQPDESFYCVSDVEAVSRLRPPAREDVRAELWQGGRFIAVAGSLRRRGAEARPRPPG
Ga0209377_11796192	3300026334	Soil	MAIYRIYLVHDDGRLQPDESFYCKTDEEAVRKLRPPGQVDLRAELWQGGRFVGAAGHIRRRPDDRPRAVG
Ga0179593_10850751	3300026555	Vadose Zone Soil	MAVYRIYLVHDDGRQDPDASFYCKTDEEAVARLRPPPREDMRAELWQGGRFIAVAGYLRRRPDERPHVLV
Ga0209981_10023962	3300027378	Arabidopsis Thaliana Rhizosphere	MAVYRIYLVHDDGRLDPDESFYCKTDLEALRHLKPSPQPDIRAELWQGGRFIGAAGYIRRRGAADAQVAG
Ga0208982_10788442	3300027574	Forest Soil	MAVYRIYLVHEDGRLEPDASFYCTTDEEAVCKLHHPPGPGVRAELWQGGRFIAVAGHVRRRPGAGPSSVHL
Ga0209166_100009656	3300027857	Surface Soil	MAVYRIYLVHDDGRLEPAESFYCTADAEAVSRIVPPSRPDIRAELWQGGRFIAAAGHRSRPAVGERPHAG
Ga0311372_103209952	3300030520	Palsa	MAIYRIYLVHDDGRLEPDASFYCKTDEDAVSKLSPPVRSDIRAELWQGGRFIAVAGHRRLPGARQPHAAR
Ga0311372_112143421	3300030520	Palsa	MAVYRIYLVHDDGRLQPDESFYCATDEEAMFKLRPPPRRDIRAELWQGGRFIAVAGSRRIPSEIRPPAP
Ga0306923_110379581	3300031910	Soil	MPVYRIYLVHDDGRLEPGDSFYMKEDSDAVRRLVAPERPDARAELWQGGRLIAVAGTRRRPGPSSPDLGAEL
Ga0308175_1000293612	3300031938	Soil	MPVYRIYLVHDDGRLEPDESFYTKEDSEALVRLSAPERPDVRAELWQGGRLIAVAGSRQRPRGPGAERGAEL
Ga0308175_1003894172	3300031938	Soil	MAVYRIYLVHDDGRLQPDASFYCARDEEAIVRLRPPGRADVRAELWQGGRFIAVAGTIHRHAGDRPHPVTGR
Ga0308175_1017995022	3300031938	Soil	MAVYRIYLVHDDGRLEPDEAFYCKTDEEAVMRLRPPGRQDVRAELWQGGRFIAIAGSTRRPGSPGGLHPPA
Ga0308174_100064566	3300031939	Soil	MAVYRIYLVDDDGRLQPDESFYCKTDEEALGRLRPPQRADIRAELWQGGRFVAVAGSRRARAEGSPLIP
Ga0308174_102278094	3300031939	Soil	MAVYRIYLVHDDGRLQPDASFYCARDEEAFVRLRPPGRADVRAELWQGGRFIAVAGTIHRHAGDRPHPVAER
Ga0308174_103459421	3300031939	Soil	MPVYRIYLVHDDGRLEPDESFYCRQDYEALQRLQPPARSDIRAELWQGGRLIAVAGSRRPHADGAETGAEAGR
Ga0308173_103543261	3300032074	Soil	RLEPDESFYCREDSEALRRLRAPTTADVRAELWQGGRLIAVAGSRRRGSGATGPEARR
Ga0307470_117035721	3300032174	Hardwood Forest Soil	MAVYRIYLVHDDGRLQPDESFYCATDEEAVRKLRPPGQVDIRAELWQGGRFVGAAGHIHRRPDDRPRAMG
Ga0307510_1000300013	3300033180	Ectomycorrhiza	MAVYRIYLVHDDGRLEPDESFYCKTDLEAVTHLRPADRPDQHAELWQGGRFIAVALRRRADDARPQPGA
Ga0372943_0140734_252_467	3300034268	Soil	MPVYRIYLVHDDGRLEPDDSFYCRQDYEAVQRLRPPARDDVRAELWQGGRLIAVAGTPQPRPDGAGAEARR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087343

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences