NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F087518

Metagenome / Metatranscriptome Family F087518

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F087518
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 128 residues
Representative Sequence TEITWDSRSRVAFVRYAFGASLTGPDGPFLVDALASWIGATGEPFAVLADAKGLRGTNAEYRASASRFFRQHRDHAFIALINLGPVIHVVVEMFRVGTGIQLKTFPDEAAARSWLRTKGIAA
Number of Associated Samples 82
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 59.09 %
% of genes near scaffold ends (potentially truncated) 41.82 %
% of genes from short scaffolds (< 2000 bps) 80.00 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.87

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (54.545 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(28.182 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(59.091 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 33.33%    β-sheet: 22.67%    Coil/Unstructured: 44.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.87
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
c.13.1.1: CRAL/TRIO domaind1r5la21r5l0.71209
c.14.1.4: Biotin dependent carboxylase carboxyltransferase domaind1on3a11on30.70654
c.14.1.3: Crotonase-liked1sg4a11sg40.69173
c.14.1.0: automated matchesd3fdua13fdu0.69088
c.14.1.3: Crotonase-liked6n96a_6n960.69013


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF13426PAS_9 10.00
PF01590GAF 8.18
PF00989PAS 5.45
PF11964SpoIIAA-like 5.45
PF03740PdxJ 3.64
PF13188PAS_8 3.64
PF00072Response_reg 1.82
PF13472Lipase_GDSL_2 1.82
PF02518HATPase_c 1.82
PF00582Usp 0.91
PF00873ACR_tran 0.91
PF11790Glyco_hydro_cc 0.91
PF01326PPDK_N 0.91
PF03601Cons_hypoth698 0.91
PF11528DUF3224 0.91
PF12706Lactamase_B_2 0.91
PF003936PGD 0.91
PF02645DegV 0.91
PF00512HisKA 0.91
PF13185GAF_2 0.91
PF12244DUF3606 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0854Pyridoxine 5'-phosphate synthase PdxJCoenzyme transport and metabolism [H] 3.64
COG03626-phosphogluconate dehydrogenaseCarbohydrate transport and metabolism [G] 0.91
COG0574Phosphoenolpyruvate synthase/pyruvate phosphate dikinaseCarbohydrate transport and metabolism [G] 0.91
COG10236-phosphogluconate dehydrogenase (decarboxylating)Carbohydrate transport and metabolism [G] 0.91
COG2855Uncharacterized membrane protein YadS, UPF0324 familyFunction unknown [S] 0.91


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A54.55 %
All OrganismsrootAll Organisms45.45 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001401|JGI20189J14885_1039173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria609Open in IMG/M
3300004092|Ga0062389_102666878All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus665Open in IMG/M
3300005541|Ga0070733_10136456All Organisms → cellular organisms → Bacteria1585Open in IMG/M
3300005591|Ga0070761_10022992All Organisms → cellular organisms → Bacteria3475Open in IMG/M
3300005602|Ga0070762_10062467All Organisms → cellular organisms → Bacteria2078Open in IMG/M
3300005602|Ga0070762_10737121All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus663Open in IMG/M
3300005610|Ga0070763_10113611All Organisms → cellular organisms → Bacteria1379Open in IMG/M
3300005610|Ga0070763_10731716Not Available581Open in IMG/M
3300005712|Ga0070764_10238009All Organisms → cellular organisms → Bacteria1033Open in IMG/M
3300005921|Ga0070766_10107762All Organisms → cellular organisms → Bacteria1659Open in IMG/M
3300005921|Ga0070766_11013772Not Available571Open in IMG/M
3300005944|Ga0066788_10073128All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300005950|Ga0066787_10062942All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300005993|Ga0080027_10000519All Organisms → cellular organisms → Bacteria16435Open in IMG/M
3300005993|Ga0080027_10032501All Organisms → cellular organisms → Bacteria1865Open in IMG/M
3300006176|Ga0070765_100022230All Organisms → cellular organisms → Bacteria4772Open in IMG/M
3300006176|Ga0070765_101775136Not Available579Open in IMG/M
3300006638|Ga0075522_10003551All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae11339Open in IMG/M
3300012210|Ga0137378_11334862Not Available632Open in IMG/M
3300012918|Ga0137396_11289384Not Available508Open in IMG/M
3300014489|Ga0182018_10218914All Organisms → cellular organisms → Bacteria1058Open in IMG/M
3300014495|Ga0182015_10592825Not Available703Open in IMG/M
3300014501|Ga0182024_10894385All Organisms → cellular organisms → Bacteria1071Open in IMG/M
3300014501|Ga0182024_11919822Not Available658Open in IMG/M
3300018476|Ga0190274_13125925Not Available557Open in IMG/M
3300020027|Ga0193752_1038147All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium2155Open in IMG/M
3300020034|Ga0193753_10119554All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1290Open in IMG/M
3300020172|Ga0211729_10514993Not Available552Open in IMG/M
3300021180|Ga0210396_11715907Not Available510Open in IMG/M
3300021339|Ga0193706_1000390All Organisms → cellular organisms → Bacteria26200Open in IMG/M
3300021363|Ga0193699_10184610Not Available864Open in IMG/M
3300021401|Ga0210393_10418804All Organisms → cellular organisms → Bacteria1092Open in IMG/M
3300021401|Ga0210393_10934375Not Available703Open in IMG/M
3300021401|Ga0210393_11154610Not Available624Open in IMG/M
3300021402|Ga0210385_10113446All Organisms → cellular organisms → Bacteria1905Open in IMG/M
3300021407|Ga0210383_10171528All Organisms → cellular organisms → Bacteria1850Open in IMG/M
3300021408|Ga0193708_1001082All Organisms → cellular organisms → Bacteria6972Open in IMG/M
3300021408|Ga0193708_1008408Not Available2642Open in IMG/M
3300021432|Ga0210384_11257132Not Available645Open in IMG/M
3300021433|Ga0210391_11048453Not Available634Open in IMG/M
3300021474|Ga0210390_10626787Not Available900Open in IMG/M
3300021477|Ga0210398_10135133All Organisms → cellular organisms → Bacteria2005Open in IMG/M
3300021559|Ga0210409_10705325Not Available880Open in IMG/M
3300022894|Ga0247778_1014767All Organisms → cellular organisms → Bacteria1802Open in IMG/M
3300022917|Ga0247777_1047345All Organisms → cellular organisms → Bacteria1532Open in IMG/M
3300023267|Ga0247771_1016129Not Available2299Open in IMG/M
3300023272|Ga0247760_1083087Not Available814Open in IMG/M
3300025703|Ga0208357_1040255Not Available1593Open in IMG/M
3300025862|Ga0209483_1003005All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae11271Open in IMG/M
3300026281|Ga0209863_10007501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin123563Open in IMG/M
3300026281|Ga0209863_10009494All Organisms → cellular organisms → Bacteria → Proteobacteria3110Open in IMG/M
3300027853|Ga0209274_10028236All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin1222587Open in IMG/M
3300027867|Ga0209167_10400232All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300027879|Ga0209169_10094149Not Available1549Open in IMG/M
3300027884|Ga0209275_10149810All Organisms → cellular organisms → Bacteria1235Open in IMG/M
3300027884|Ga0209275_10169267Not Available1167Open in IMG/M
3300027889|Ga0209380_10181161All Organisms → cellular organisms → Bacteria1235Open in IMG/M
3300027895|Ga0209624_10233011Not Available1224Open in IMG/M
3300027908|Ga0209006_10584810Not Available924Open in IMG/M
3300027908|Ga0209006_10659961Not Available859Open in IMG/M
3300027908|Ga0209006_10904703Not Available708Open in IMG/M
3300028666|Ga0265336_10205882Not Available585Open in IMG/M
3300028745|Ga0302267_10410682Not Available557Open in IMG/M
3300028783|Ga0302279_10114146Not Available1403Open in IMG/M
3300028800|Ga0265338_10572184Not Available789Open in IMG/M
3300028879|Ga0302229_10336142All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus676Open in IMG/M
3300028882|Ga0302154_10513517Not Available569Open in IMG/M
3300028906|Ga0308309_10008729All Organisms → cellular organisms → Bacteria → Proteobacteria6251Open in IMG/M
3300029882|Ga0311368_10409335Not Available996Open in IMG/M
3300029907|Ga0311329_10371771Not Available1010Open in IMG/M
3300029907|Ga0311329_10737267Not Available635Open in IMG/M
3300029943|Ga0311340_10836941Not Available772Open in IMG/M
3300029945|Ga0311330_10483441Not Available1002Open in IMG/M
3300029945|Ga0311330_10877341Not Available673Open in IMG/M
3300029951|Ga0311371_11028099All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae976Open in IMG/M
3300030007|Ga0311338_10784296Not Available952Open in IMG/M
3300030503|Ga0311370_10371824All Organisms → cellular organisms → Bacteria1811Open in IMG/M
3300030520|Ga0311372_11486974Not Available836Open in IMG/M
3300030520|Ga0311372_11681242Not Available767Open in IMG/M
3300030524|Ga0311357_11796530All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus510Open in IMG/M
3300030617|Ga0311356_10191824All Organisms → cellular organisms → Bacteria2093Open in IMG/M
3300031090|Ga0265760_10239495Not Available625Open in IMG/M
3300031233|Ga0302307_10465888Not Available641Open in IMG/M
3300031234|Ga0302325_10175736All Organisms → cellular organisms → Bacteria3756Open in IMG/M
3300031234|Ga0302325_10654851Not Available1528Open in IMG/M
3300031234|Ga0302325_11855091Not Available752Open in IMG/M
3300031236|Ga0302324_100234014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2888Open in IMG/M
3300031236|Ga0302324_100642381All Organisms → cellular organisms → Bacteria1512Open in IMG/M
3300031236|Ga0302324_101161944Not Available1032Open in IMG/M
3300031236|Ga0302324_101228649Not Available996Open in IMG/M
3300031236|Ga0302324_101536901Not Available862Open in IMG/M
3300031258|Ga0302318_10357898Not Available733Open in IMG/M
3300031456|Ga0307513_10018392All Organisms → cellular organisms → Bacteria8349Open in IMG/M
3300031524|Ga0302320_10131621All Organisms → cellular organisms → Bacteria3858Open in IMG/M
3300031524|Ga0302320_10748344Not Available1096Open in IMG/M
3300031525|Ga0302326_11025668Not Available1156Open in IMG/M
3300031525|Ga0302326_11401130All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300031525|Ga0302326_13251550Not Available547Open in IMG/M
3300031649|Ga0307514_10158679All Organisms → cellular organisms → Bacteria → PVC group1502Open in IMG/M
3300031708|Ga0310686_109484156Not Available657Open in IMG/M
3300031708|Ga0310686_118695584Not Available697Open in IMG/M
3300031715|Ga0307476_11414250Not Available506Open in IMG/M
3300031726|Ga0302321_103146882Not Available538Open in IMG/M
3300031753|Ga0307477_10441278Not Available889Open in IMG/M
3300031788|Ga0302319_10887423Not Available868Open in IMG/M
3300031962|Ga0307479_10003853All Organisms → cellular organisms → Bacteria13727Open in IMG/M
3300031962|Ga0307479_10708194All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300031962|Ga0307479_10750156All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300032157|Ga0315912_10791022Not Available755Open in IMG/M
3300034163|Ga0370515_0427354Not Available559Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa20.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil14.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.00%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog10.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.55%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil3.64%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil3.64%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.64%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter3.64%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.82%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.82%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.82%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa1.82%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.82%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza1.82%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.82%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.91%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.91%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.91%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.91%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001401Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005944Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048EnvironmentalOpen in IMG/M
3300005950Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047EnvironmentalOpen in IMG/M
3300005993Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300020027Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1EnvironmentalOpen in IMG/M
3300020034Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2EnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021339Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021408Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c1EnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022894Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L049-202B-5EnvironmentalOpen in IMG/M
3300022917Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5EnvironmentalOpen in IMG/M
3300023267Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L197-509C-6EnvironmentalOpen in IMG/M
3300023272Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L171-409R-4EnvironmentalOpen in IMG/M
3300025703Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025862Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)EnvironmentalOpen in IMG/M
3300026281Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027879Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028666Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaGHost-AssociatedOpen in IMG/M
3300028745Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3EnvironmentalOpen in IMG/M
3300028783Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300028879Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3EnvironmentalOpen in IMG/M
3300028882Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029907I_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029945I_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030524II_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031233Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031258Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1EnvironmentalOpen in IMG/M
3300031456Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EMHost-AssociatedOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031649Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EMHost-AssociatedOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20189J14885_103917313300001401Arctic Peat SoilIASVRYAAGASLAGPDGPFLVDALTRWIGATGEPFAVLADGAGLRGTNAEYRANVSRFFRQHRQAARIALINLGPVIHVVVEMFRVGTGVQLKTFADEAAARSWLRTKGIAA*
Ga0062389_10266687813300004092Bog Forest SoilVSPTSEPTVSSPSTVIRWHPASRVAFVRYASGASLTSEDGAFLVDALTDWIGDDGAPFAVLADAAGLRGTDGDYRAKASGFFRQHRDHAFIALVNLGPVIHVVVEMFRVGTGIQLKTFPDEAGARSWLRAKGIAA
Ga0070733_1013645613300005541Surface SoilKVTSPSTEIMQDARSRVAFVRYSPGAILASTDGTLLVGALTGSIGADSESFAVLADAGGLEGTDAESCAQASRFFRQHRDHAFIALLNLGPVIHIVVEMFRVGTGIQLKTFTDEAEARCWLRAKGIAA*
Ga0070761_1002299223300005591SoilMSGDTVTSDSTTIRWDAHSRVALVRYTAGANLTGADGPVLIDALTGWIGAKPERFAVLADGAGLQGTNAEYRASVSRFFRQYRDTAFIALVNLGPVIHVVVEMFRVGTGIQLKAFAGEAAARSWLRTKGIAA*
Ga0070762_1006246723300005602SoilVVTVVSPSTEIAWDPDQRLASVRYTKGATLRGPDGDFLVEALRGWIGGQNQPFAVLADAAGLLGTDAEYRAKASGFFRQHRDTSFIALINLGPVIHVVVELFRVGTGIQLKTFANAPAARDWLRGKGIAA*
Ga0070762_1073712113300005602SoilMTPSNESTVTSPSTHITWHAPSRVAFVRYALGASLTGPDGPFLVDALTGWIGTAGEPFAVLADAKGLQGTNAEYRASASRFFRQHRDHAFIALINLGPVIHVVVEMFRVGTGIQLKTFPDEAAARSWLRTKGIAA*
Ga0070763_1011361123300005610SoilVVTVVSPSTEIAWDPDQRLANVRYTKGATLRGPDGDFLVEALRGWIGGQNQPFAVLADAAGLLGTDAEYRAKASGFFRQHRETSFIALINLGPVIHIVVELFRVGTGIQLKTFANEPSARDWLRGKGIAA*
Ga0070763_1073171623300005610SoilWDGPSRIAAVRYSQGAVLTSKDGTFLVDALSGWIGEHRDPFAVLANGAGLGGTDAEYRAKASRFFRQHRDHAFIALINLGPVIHVVVEMFRVGTSIQLKTFSDEAAARSWLQTKGVAA*
Ga0070764_1023800923300005712SoilSRNSSPCGSSTTDFASGDTVTNGSMEIRWDLPSRIAFVRYVPGAVLTAADGAVLVDALSAWIGTTGEAFAVLADGKGLRGTSAPYRAHVSRFFRQHRDTARIALINLGPVIQIVVEMFRVGTGIQLKAFASEAEARSWLTAKGIAA*
Ga0070766_1010776213300005921SoilMWDARSRVAFVRYSPGAILASTDGTFLADALTGWVGVDGESFAVLADAAGLGGTDAEYRAKASHFFRQHRDHAFIALLNLGPVIHVVVEMFRIGTGIQLKTFADEAEARSWLRAKGIAA*
Ga0070766_1101377213300005921SoilLMTAPDQTTVTSPSTEITWDSRSRVATVRYAPGADLAGPDGPFLVDALTGWIGADGEPFAVLADAQGLRGTNAEYRASASRFFREHRDHAFIALTNLGPVIHVVVEMFRVGTGIQLKTFPDEAAARSWLRTKGIAA*
Ga0066788_1007312823300005944SoilMVSRNSSPCGWSITTSVHGDTATSESMEIRWDPRSRIAAVLYAPDSNLTAEDGDILVDALTGWIGTQGERFAVLADGTGLRSTSAPYRAKASRFFRVHRDTACIALVNLGPVIQIVVEMFRVGTGIQLKAFASEAAARSWLAAKGIAA*
Ga0066787_1006294223300005950SoilIGPDGPFLVDALTRWIGATGEPFAVLADAAGLRGTNAAYRAHVSRFFRQHRDTAFIALINLGPVIHVVVEMFRVGTGIQLKTFADEAAARSWLRTKGIAG*
Ga0080027_10000519103300005993Prmafrost SoilMNTSTNGDTVKSGSTEIRWNPVSRVAFVRYSAGASLGRVDGPFLVDALTGWIGSKGEPFSVLADGAGLRATDAEYRAHVSRFFRRHRHTACIALINLGPVLRVVVEMFGIGTGIPLKTFADEEAARSWLRAQGIAA*
Ga0080027_1003250123300005993Prmafrost SoilVVKVTSPSTEISWSARERLASVRYMPGTMLASKDGDFLIESLSDWIGKEGEPFAVFANAAGLHGTDAEYRARASGFFRQHRDTAFIALINLGPVIHVVVELFRVGTGIQLKTFANEAAARSWLRAKGIAV*
Ga0070765_10002223023300006176SoilVIPANGHTVTSPSTEIMWDARSRVAFVRYSPGAILASTDGTFLADALTGWVGVDGESFAVLADAAGLGGTDAEYRAKASHFFRQHRDHAFIALLNLGPVIHVVVEMFRIGTGIQLKTFADEAEARSWLRAKGIAA*
Ga0070765_10177513613300006176SoilVVTVVSPSTEIAWDPDQRLANVRYTKGATLRGPDGDFLVEALRGWIGGQNQPFAVLADAAGLLGTDAEYRAKASGFFRQHRETSFIALINLGPVIHIVVELFRVGTGIQLKTFANEPSARDWLRGKVIAA*
Ga0075522_1000355183300006638Arctic Peat SoilLVTVSSPSTEISWDQDQRLAGVRYTKGVTLRGPDGDFLVASLTGWIGEQHQPFAVLADAAGLLGTDAEYRAKASGFFRQHRESAFIALINLGPVIHVVVELFRIGTGIQLRTFANEPAARVWLRNRGIAA*
Ga0137378_1133486213300012210Vadose Zone SoilKDGDFLVEALTGWIGAKGQPFAVFADAAGLHGTDAEYRAKASGFFRQHRDTAFIALINLGPVIHVVVELFRVGTGIQLKTFSNEAAARSWLRTKGIAV*
Ga0137396_1128938423300012918Vadose Zone SoilMTSTSESTVTSPSAVITWHAPSRVAVVRYTPGAILTSEDGTFLVGALTSWIGAGPEPFAVLADGNGLRGTDAAYRAKASRFFRQYRDKAFIALINLGPVIHVVVEMFRIGTGI
Ga0182018_1021891423300014489PalsaMIWRPASRIAAVRYTQGTNLNVVDGAFLVDSLTGWIGESAEPFAVLADAAGLHGTDAAYRAKASAFFREHKDEAFIALINLGPVIHIVVEMFRIGTGIQLKTFTDEAAAHAWLRTKGIKA
Ga0182015_1059282513300014495PalsaMGDSDSVANASTEIRWDPGSRVASVRYTAGVTLTAPDGPFLVDALTGWVGTERQPFAVLADAAGLRGTNAEYRATASRFFRQHRDHACIAILNASPVVHVIVEMFRLATGIQLKSFADEADARAWLRTRGIAA*
Ga0182024_1089438523300014501PermafrostNLTAAAGVFLVEALTRWVGVDRQPFGVLADGSGLRGTDSEYRAKASAFFRQHRDTSYIALFHLGPVIHVVVEMFRVGTAIQLRSFGDEAAARAWLRTKGIAA*
Ga0182024_1191982223300014501PermafrostGPDGPFLVDALTGWIGTAGEPFAVLADAKGLHGTNAEYRASASRFFRQHRDRAFIALINLGPVIHVVVEMFRVGTGIQLKTFADEAAARSWLRTKGIAA*
Ga0190274_1312592513300018476SoilMKVLGEGADGMVKVTSPSTEVSWSPAERLTGVRYTPGITLTIRDGDFLVDALTGWIGTKGQPFAVLADAAGLQGTDAEYRAKASGFFRQHRDTAFIALINVGPVIHVVVEL
Ga0193752_103814723300020027SoilVSAAAEVTCASTGIAWSPEQRVAHVRYTRGATLTSTDGDFLVDALTSWVGGEGEPFAVLADAAGLHGTDAAYRAKASGFFRQHRGTAFIALTNVGPVIHVVVELFRVGTGIQLKTFPSEVAARTWLRAKGIAA
Ga0193753_1011955423300020034SoilVNGTITSAAADITWDSESRVAFVRYKLDARLGAGDGVLLVDALTGWIGTEATPFAVVADAKELRGTDGHYRAHASKFFRRHRETAFIALLNMGPVIHIVVEMFRLGTGIQLKTFGDEALARAWLRTKGIAA
Ga0211729_1051499313300020172FreshwaterMTNIVASDSTHIAWDSEQRVAAVRYVADASLVSKDADFLVESLTRWIGADAKPFAVLADGAGLRGTNAEYRAGASQFFRQHRGNAYIALINLGPAIYVLVELFRLGTGIQLKSFETEAMARAWLRTKAIAA
Ga0210396_1171590723300021180SoilPDGPFLVDALASWIGADGEPFAVLADAKGLRGTNAEYRASASRFFRQHRDQAFIARINLGPVIHIVVEMFRVGTGIQLKTFPDEAAARSWLRAKGIAA
Ga0193706_1000390163300021339SoilMRVLGEGADGMVKVTSPSTEISWSPEERVAGVRYTPGITLTSRDGDFLVDALTGWIGTQGQPFAVLADAAGLQGTDGAYRARASGFFRQHQDTAFIALINLGPVIHVVVELFRVGTGIQLKTFASETAARAWLRTKGIAV
Ga0193699_1018461023300021363SoilMVKVTSPSTELTWSAEERLATVRYTAGITLKSKDGDFLAETLTGWIGVTGEPFAVFADAAGLHGTDAEYRAKASGFFRQHRDTAFIALINVGPVIHVVVELFRVGTGIQLKTFANEAAARSWLRTKGIAV
Ga0210393_1041880423300021401SoilVGDGPWSEFAGASSAVRVSSVDPRWVVTPPSSGDSVRSDSTEIHWDPEARVASVRYAAGASLTGPDGPLLVDALMRWIGTAGEPFAVLADGAGLRGTNAEYRANVGRFFRQHRHAARIALINLGPVIHVVVEMFRVGTGIQLKTFADEAAARSWLRTKGIAA
Ga0210393_1093437513300021401SoilMDSLRRRDEGMTQTNADRAVSASTEISWHTPSRVATVCYTPGASLTGADGTFLVDALAGWVGDDCEPFASLADGTGLRGTDAPYRARASHFFRQHRATAFVALINLGPVIHVVVEMFRVGTGIQLKTFADEAAARTWLRTKGIAA
Ga0210393_1115461023300021401SoilVVTVVSPSTEIAWDPDQRLASVRYTKGATLRGPDGDFLVEALRGWIGGQNQPFAVLADAAGLLATDAEYRAKASGFFRQHRDTSFIALINLGPVIHVVVELFRVGTGIQLKTFTNEPAARDWLRGKGIAA
Ga0210385_1011344633300021402SoilVVTVVSPSTEIAWDPDQRLANVRYTKGATLRGPDGDFLVAALRGWIGGQNQPFAVLADAAGLLGTDAEYRARASGFFRQHRDTSFIALINLGPVIHVVVELFRVGTGIQLKTFAHEAAARDWLRGKGIAA
Ga0210383_1017152823300021407SoilMTVPNDSTVTSPSTQITWHAPSRVAVVRYAHGAALTGKDGRFLVDALTAWIGPDPDPFAVLADAAGLGGTDGEYRTEAGRFFRQHRDGAFIALTNLGPVIHVVVEMFRVGTGIQLKTFADEVAARCWLRTKGIAA
Ga0193708_100108233300021408SoilVAATTNGDAVTCASTAITWQPSARVAFVRYADGATLTAPDGSFLVDALTGWIGMARKPFAVLADAKGLRGTDAPYRALVSRFFRQHRDTAFIALINMGPVIHIIVEMFRIGTGIQLKTFADEAAARAWLRNKGLAA
Ga0193708_100840813300021408SoilAWSPEERVAGVRYTPGITLTSRDGDFLVDALTGWIGTQGQPFAVLADAAGLQGTDGAYRARASGFFRQHQDTAFIALINLGPVIHVVVELFRVGTGIQLKTFASETAARAWLRTKGIAV
Ga0210384_1125713213300021432SoilMGDEVKPEVDSGKVTSPSTTIAWDASSRVALVRYSLGATLASTDAAFLVDALTGWVGTDGAPFGVLADGAGLRGTDAQYRSKVSRFFKAHRSHAFIALFNLGPVIHVVVELFRVGTG
Ga0210391_1104845313300021433SoilCYSVGVVLTIGDARFLVNALTGWVGAGGEPFAVLADGARLGGTDGEYRAEASRFFRQHRDHAFIALINLGPMMHVVVEMFRVGTGIQLKTFADETAARAWLRTKGIAA
Ga0210390_1062678723300021474SoilVVTVVSPSTEIAWDPDQRLANVRYTKGATLRGPDGDFLVEALRGWIGGQNQPFAVLADAAGLLGTDAEYRAKASGFFRQHRETSFIALINLGPVIHIVVELFRVGTGIQLKTFANEPSARDWLRGKGIAA
Ga0210398_1013513323300021477SoilMTPSNESTVTSPSTHITWHAPSRVAFVRYALGASLTGPDGPFLVDALTGWIGTAGEPFAVLADAKGLQGTNAEYRASASRFFRQHRDHAFIALINLGPVIHVVVEMFRVGTGIQLKTFPDEAAACSWLRTKGIAA
Ga0210409_1070532523300021559SoilMTAPSESTVKSPGATISWHAMSRVAYVRYSQGAVLTSKDGTFLVEALTGWVGGDREPFAVLADAAGLGGTNGEYRAKASRFFRQHRERAFIALINLGPVIHVVVEMFRVGTGIQLKTFADEAAARSWLRTKGIAA
Ga0247778_101476723300022894Plant LitterMTPTVKLASASSELSWSHEQRLACVRYTPGATLALKDGDFLVTALGGWIGDAGEPFAVLAYASGLRGTDAEYRAKASGFFRQYRDTGFIALIDVGPVIRVVVELFRVGTGIQLKTFASEADALGWLRSKGIAA
Ga0247777_104734523300022917Plant LitterMTPVKLTSASSEISWEPETRLARVRYTPGATLTLKDSDFLVQALTGWIGAEGEPFAVLAYASGLRGTDAEYRAKTSAFFRRYRDIGYIALIDVGPVIRIVVELFRVGTGIQLKTFTSEAAAHEWLRTMGIAA
Ga0247771_101612923300023267Plant LitterSGANLTSPDGDFLAGTLAGWVGASAQPFAILADAAGLQSTDAAYRAKASGFFRLHREHSFIALVNVGPLIQVVVELFGLGTGIPLKTFASEAAARTWLRSKGIAA
Ga0247760_108308723300023272Plant LitterMSGNTTVESATTEIRWDSEQRVAHVRYRSGASLTSPDGDFLAGTLAGWVGASAQPFAILADAAGLQSTDAAYRAKASGFFRLHREHSFIALVNVGPLIQVVVELFGLGTGIPLKTFASEAAARTWLRSKGIAA
Ga0208357_104025523300025703Arctic Peat SoilLRGPDGDFLVASLTGWIGEQHQPFAVLADAAGLLGTDAEYRAKASGFFRQHRESAFIALINLGPVIHVVVELFRIGTGIQLRTFANEPAARVWLRNRGIAA
Ga0209483_100300523300025862Arctic Peat SoilLVTVSSPSTEISWDQDQRLAGVRYTKGVTLRGPDGDFLVASLTGWIGEQHQPFAVLADAAGLLGTDAEYRAKASGFFRQHRESAFIALINLGPVIHVVVELFRIGTGIQLRTFANEPAARVWLRNRGIAA
Ga0209863_1000750123300026281Prmafrost SoilMNTSTNGDTVKSGSTEIRWNPVSRVAFVRYSAGASLGRVDGPFLVDALTSWIGSKGEPFSVLADGAGLRATDAEYRAHVSRFFRRHRHTACIALINLGPVLRVVVEMFGIGTGIPLKTFADEEAARSWLRAQGIAA
Ga0209863_1000949423300026281Prmafrost SoilVVKVTSPSTEISWSARERLASVRYMPGTMLASKDGDFLIESLSDWIGKEGEPFAVFANAAGLHGTDAEYRARASGFFRQHRDTAFIALINLGPVIHVVVELFRVGTGIQLKTFANEAAARSWLRAKGIAV
Ga0209274_1002823623300027853SoilMSGDTVTSDSTTIRWDAHSRVALVRYTAGANLTGADGPVLIDALTGWIGAKPERFAVLADGAGLQGTNAEYRASVSRFFRQYRDTAFIALVNLGPVIHVVVEMFRVGTGIQLKAFAGEAAARSWLRTKGIAA
Ga0209167_1040023223300027867Surface SoilTEIMQDARSRVAFVRYSPGAILASTDGTLLVGALTGSIGADSESFAVLADAGGLEGTDAESCAQASRFFRQHRDHAFIALLNLGPVIHIVVEMFRVGTGIQLKTFTDEAEARCWLRAKGIAA
Ga0209169_1009414913300027879SoilMVSRNSSPWGSAAPATLADGDTVTNGSMEIRWDLPSRIAFVRYVPGAVLTAADGAVLVDALSAWIGTTGEAFAVLADGKGLRGTSAPYRAHVSRFFRQHRDTARIALINLGPVIHVVVELFRVGTGIQLKTFANEAAARDWLRGKGIAA
Ga0209275_1014981023300027884SoilMTPSNESTVTSPSTHITWHAPSRVAFVRYALGASLTGPDGPFLVDALTGWIGTAGEPFAVLADAKGLQGTNAEYRASASRFFRQHRDHAFIALINLGPVIHVVVEMFRVGTGIQLKTFPDEAAARSWLRTKGIAA
Ga0209275_1016926723300027884SoilRLTQGKRWATIAPAAGREDGSAVVTVVSPSTEIAWDPDQRLASVRYTKGATLRGPDGDFLVEALRGWIGGQNQPFAVLADAAGLLGTDAEYRAKASGFFRQHRDTSFIALINLGPVIHVVVELFRVGTGIQLKTFANAPAARDWLRGKGIAA
Ga0209380_1018116123300027889SoilMWDARSRVAFVRYSPGAILASTDGTFLADALTGWVGVDGESFAVLADAAGLGGTDAEYRAKASHFFRQHRDHAFIALLNLGPVIHVVVEMFRIGTGIQLKTFADEAEARSWLRAKGIAA
Ga0209624_1023301123300027895Forest SoilMLNVTNATTEISWSPEERVAGVRYAPDATLGSQDGDFLVESLRGWIGTEGVPFAIFADAAGLRATDAEYRAKASRFFRQHRETAFIALINLGPVIQVVVELFRVGTGIQLKTFPSEAAARAWLRTKGIAA
Ga0209006_1058481023300027908Forest SoilMVSRNSSPCGSSTATFANGDTVTNGSMEIRWDLPSRIAFVRYVPGAVLTAADGAVLVDALTGWIGTTGQAFAVLADGKGLRGTSAPYRAHVSRFFRQHRDTARIALINLGPVIQIVVEMFRLGTGIQLKAFDSEAAARSWLTAKGIAA
Ga0209006_1065996123300027908Forest SoilMTVTSPSTEITWDPRTRVAVVRYTPGASLAGPDGPFLVDALTGWIGTSGEPFAVLADAKGLRGTDAEYRASVSRFFRQYRDHAFIALTNVSAVIHVVVEMFRIGTGIQLKTFPDEAAARSWLRKNGIAA
Ga0209006_1090470323300027908Forest SoilLTQGKRWATIAPAAGREDGSAVLTVVSPSTEIAWDPDQRLANVRYTKGATLGGPDGDFLVEALRGWIGGQSQPFAVLADAAGLLGTDAEYRAKASGFFRQHRDTSFIALINLGPVIHVVVELFRVGTGIQLKTFANEPAARDWLRSKGIAA
Ga0265336_1020588223300028666RhizosphereMVKVTSPTTEIVWSPDKRVADVRYTRGTTLRSEDGDFLVATLTGWIGANGDPFAVLADAAGLEGTDAEYRAKANRFFREHRRTAFIALINLGPVIHVVVELFRVGTGIQLKTFSDDPAARAWLRTKGIAA
Ga0302267_1041068223300028745BogSGETAVSGTTEIHWDATSRLAFVRYSAGAGLTGADGSFLVDALSGWIGTAGKPFGVLADGRGLRATNAEYRACASRFFRQQRDVACVALINVSPVIYVVVEMFRVGTGVQLKSFGDEASARVWLRTMGIPA
Ga0302279_1011414613300028783BogVIGELYDRGAASGETAVSGTTEIHWDATSRLAFVRYSAGAGLTGADGSFLVDALSGWIGTAGKPFGVLADGRGLRATNAEYRACASRFFRQQRDVACVALINVSPVIYVVVEMFRVGTGVQLKSFGDEASARVWLRTMGIPA
Ga0265338_1057218423300028800RhizosphereVVMDDDSIANGSTQISWHSSSRVALVRYTSGAHLAASDGVFLVDAPTTWLGASGTPFAILADANGLRETDAPCRSRVSKFFKQHRDTAVIALVNLGPVIHIVVEMFRLGTGIQLKTFESEPAARSWLRARGIAA
Ga0302229_1033614213300028879PalsaMTAPGQMTFTGPSTEITWDSRSRVAVVRYAPGASLAGPDGPFLIDALTGWIGADGEPFAVLADAKGLRGTNAEYRASASRFFRQHRDHAFIALTNLGPVIHVVVEMFRVGTGIQLKTFPDEAAARSWL
Ga0302154_1051351713300028882BogDTVTTDSMEIRWDPASRFATVRYTPGTTLGDADGVALVDALTGWIGAHGEPFAVLADGTGLRGTDGEYRARVSRFFRLHRDTACIALVHLSPVIQIVVEMFRLGTGIPLKTFSTEAAARSWLRTRGVTA
Ga0308309_1000872943300028906SoilVIPANGHTVTSPSTEIMWDARSRVAFVRYSPGAILASTDGTFLADALTGWVGVDGESFAVLADAAGLGGTDAEYRAKASHFFRQHRDHAFIALLNLGPVIHVVVEMFRIGTGIQLKTFADEAEARSWLRAKGIAA
Ga0311368_1040933513300029882PalsaMTAPGQMTFTGPSTEITWDSRSRVAVVRYAPGASLAGPDGPFLIDALTGWIGADGEPFAVLADAKGLRGTNAEYRASASRFFRQHRDHAFIALTNLGPVIHVVVEMFRVGTGIQLKTFPDEAAARSWLRTKGIAA
Ga0311329_1037177123300029907BogGSFLVDALSGWIGTAGKPFGVLADGRGLRATNAEYRACASRFFRQQRDVACVALINVSPVIYVVVEMFRVGTGVQLKSFGDEASARVWLRTMGIPA
Ga0311329_1073726713300029907BogDPASRFATVRYTPGTTLGDADGVALVDALTGWIGAHGEPFAVLADGTGLRGTDGEYRARVSRFFRLHRDTACIALVHLSPVIQIVVEMFRLGTGIPLKTFSTEAAARSWLRTRGVTA
Ga0311340_1083694123300029943PalsaVTTAATGGRDRTSSDSTRIAWDALSRIACVRYALGAVLTNEAGTFLVDALAGWIGVDGEPFAVLADAEGLGGTDAEYRVVASRFFRRHRDHVFIALINLGPVIHVVAEMFRVGTGIQLKTFPDEVSARSWLCTKGIAT
Ga0311330_1048344113300029945BogVALVDALTGWIGAHGEPFAVLADGTGLRGTDGEYRARVSRFFRLHRDTACIALVHLSPVIQIVVEMFRLGTGIPLKTFSTEAAARSWLRTRGVTA
Ga0311330_1087734113300029945BogVDALSVWIGTAGKPFGVLADGRGLRATNAEYRACASRFFRQQRDVACVALINVSPVIYVVVEMFRVGTGVQLKSFGDEASARVWLRTMGIPA
Ga0311371_1102809923300029951PalsaMIPTTSADIVANVSTEIRWDPRGRIALVRYAAGASLVGADGPLSTDALTAWIGAGDEPFAVLADGAGLRGTNAECRAFVSRFFKEHRKTAHIALINLGPVIQIVVDMFRVVTGVKLKAFPDEAA
Ga0311338_1078429613300030007PalsaLSRIACVRYALGAVLTNEAGTFLVDALAGWIGVDGEPFAVLADAEGLGGTDAEYRVVASRFFRRHRDHVFIALINLGPVIHVVAEMFRVGTGIQLKTFPDEVSARSWLCTKGIAT
Ga0311370_1037182413300030503PalsaMTAPGQMTFTGPSTEITWDSRSRVAVVRYAPGASLAGPDGPFLVDALRGWIGADGEPFAVLADAKGLRGTNAEYRASASRFFRQHRDHAFIALTNLGPVIHVVVEMFRVGTGIQLKTFPDEAAARSWLRTKGIAA
Ga0311372_1148697423300030520PalsaGDSVASDSTQIRWDAASRIASVRYTAGVSLTGPDGPFLVDALTKWIGVTGEAFAVLADARGLRSTDAAYRAASGNFFKQHRATTYVALTNVGPVIRVVVEMFRLGTGIQLKTFADESAARGWLRSKGIAA
Ga0311372_1168124223300030520PalsaGDPVASDSTEIRWDPGSRVAMVRYAAGASLAAADGPFLVDALTAWIGTKGEPFAVLADGAGLRGTNAEYRASASRFFRLHRTAAFIALINLGPVINVVVEMFRIGTGIQLKAFADEGAARSWLRTKGIAA
Ga0311357_1179653013300030524PalsaMTAPGQMTFTGPSTEITWDSRSRVAVVRYAPGASLAGPDGPFLIDALTGWIGADGEPFAVLADAKGLRGTNAEYRASASRFFRQHRDHAFIALTNLGPVIHVVVEMFRVGTGIQLKTFPDEAAARSWLRTK
Ga0311356_1019182423300030617PalsaWDSRSRVAVVRYAPGASLAGPDGPFLVDALRGWIGADGEPFAVLADAKGLRGTNAEYRASASRFFRQHRDHAFIALTNLGPVIHVVVEMFRVGTGIQLKTFPDEAAARSWLRTKGIAA
Ga0265760_1023949513300031090SoilMTPSNESTVTSPSTHITWHAPSRVAFVRYTFGASLTGPDGPFLVDALTGWIGTAGEPFAVLADAKGLHGTNAEYRASASRFFRQHRDRAFIALINLGPVIHVVVEMFRVGTGIQLKTFADEAAARSWLRTKGIAA
Ga0302307_1046588813300031233PalsaTAPGQMTFTGPSTEITWDSRSRVAVVRYAPGASLAGPDGPFLIDALTGWIGADGEPFAVLADAKGLRGTNAEYRASASRFFRQHRDHAFIALTNLGPVIHVVVEMFRVGTGIQLKTFPDEAAARSWLRTKGIAA
Ga0302325_1017573613300031234PalsaVTIPENGETVTSGSTEITWDPGSRVASVCYADGASLTGADGPLLVDALTRWIGVTSAPFAVLANGAGLRGTNAEYRASVSGFFRQHRDTAFIALINLGPVIHIVVEMFRIGTGIQLKAFADDAAARSWLRAKGIAA
Ga0302325_1065485123300031234PalsaVITPANGDTVVSDTTEIHWDPPSRIAFVRYEDGASLKGPDGPFLVDALTGWIGADGKPFAVLADARGLRGTNAEYRASASRFFREHRDTACIALINVGPVIHVVVEMFRVGTGIQLKTFADETTARTWLRSKGIAA
Ga0302325_1185509123300031234PalsaQPMTISTNGDTVASDSTEIRWDPGSRVAMVRYAAGASLAAADGPFLVDALTAWIGTKGEPFAVLADGAGLRGTNAEYRASASRFFRLHRTAAFIALINLGPVINVVVEMFRIGTGIQLKAFADEGAARSWLRTKGIAA
Ga0302324_10023401433300031236PalsaMTTENEAILGSAVTSGSTEVRWSSTSRVALVRYTQGAILTELDGVFLVEALERWIGPGGEPFGVLADGTGLRGTEGGYRALVGRFFRQHRRDARIALINLGPVIHVVVEMFRLGTGVPLRSFGDEAAARAWLRGEGIAA
Ga0302324_10064238113300031236PalsaPENGETVTSGSTEITWDPGSRVASVCYADGASLTGADGPLLVYALTSWIGVTSAPFAVMANGAGLRGTNAEYRASVSGFFRQHRDTAFIALINLGPVIHIVVEMFRIGTGIQLKAFADDAAARSWLRAKGIAA
Ga0302324_10116194423300031236PalsaMGDSDSVANASTEIRWDPGSRVASVRYTAGVTLTAPDGPFLVDALTGWVGTERQPFAVLADAAGLRGTNAEYRATASRFFRQHRDHACIAILNASPVVHVIVEMFRLATGIQLKSFADEADARAWLRTRGIAA
Ga0302324_10122864913300031236PalsaMITPANGDAVFSDTTEIRWDAASRLASVRYRDGASLTAPDGPFLVDALTVWIGTEGKPFGVLADAKGLRGTSPEYRASASRFFRKHRDIAFIALINLGPVIHVVVEMFRVGTGIQLKTFADETTARAWLRSKGIAA
Ga0302324_10153690113300031236PalsaATGGRDRTSSDSTRIAWDALSRIACVRYALGAVLTNEAGTFLVDALAGWIGVDGEPFAVLADAEGLGGTDAEYRVVASRFFRRHRDHVFIALINLGPVIHVVAEMFRVGTGIQLKTFPDEVSARSWLCTKGIAT
Ga0302318_1035789813300031258BogVTPVTDRDTVTTDSMEIRWDPASRFATVRYTPGTTLGDADGVALVDALTGWIGAHGEPFAVLADGTGLRGTDGEYRARVSRFFRLHRDTACIALVHLSPVIQIVVEMFRLGTGIPLKTFSTEAAARSWLRTRGVT
Ga0307513_10018392113300031456EctomycorrhizaVIAAAVKVTSESTEISWSPPERLASVRYTAGITLTNKDGDFLVEALTGWIGTSREPFAVFADALGLHGTDAEYRAKASNFFRKHRGTAFIALINLGPMIHVVVELFRVGTGIQLKTFA
Ga0302320_1013162113300031524BogFDVRSERWCRVTPVTDRDTVTTDSMEIRWDPASRFATVRYTPGTTLGDADGVALVDALTGWIGAHGEPFAVLADGTGLRGTDGEYRARVSRFFRLHRDTACIALVHLSPVIQIVVEMFRLGTGIPLKTFSTEAAARSWLRTRGVTA
Ga0302320_1074834423300031524BogVIGELYDRGAASGETAVSGTTEIHWDATSRLAFVRYSAGAGLTGADGSFLVDALSGWIGTAGKPFGVLADGRGLRATNAEYRACASRFFRQQRDVACVALINVSPVIYVVVEMFRVGTGVQLKSFGDEASAR
Ga0302326_1102566813300031525PalsaMGDSDSVANASTEIRWDPGSRVASVRYTAGVTLTAPDGPFLVDALTGWVGTERQPFAVLADAAGLRGTNAEYRATASRFFRQHRDHACIAILNASPVVHVIVEMFRLATGIQLK
Ga0302326_1140113013300031525PalsaMMPSNDSTLVSPSTAITWHSHSRVAFVRYTSGANLTGEDGAFLVDALERWIGEHCDPFAVLADAAGLRGTDGDYRAKASGFFRQHRDHAFIALINLGPVIHVVVEMFRLGTGIQLKTFPDEAAARSWLRAKGIAA
Ga0302326_1325155023300031525PalsaMTIPTTGHPAASDSTEIRWDPGSRVAMVRYAAGASLAAADGPFLVDALTAWIGTKGEPFAVLADGAGLRGTNAEYRASASRFFRLHRTAAFIALINLGPVINVVVEMFRIGTGIQLKAFADEGAARSWLRTKGIAA
Ga0307514_1015867923300031649EctomycorrhizaMGSDEADGMVKVTNPSTEIAWNAEERVASVRYTANATLTSKDGDFLVEALTSWIGTSAEPFAVLANAAGLRGTEAEYRAKASSFFRQHRETAFIALTDLGSVIHVVVELFRIGTGIQLKTFASEADARSWLRTKGIAA
Ga0310686_10948415613300031708SoilMMTATNGENVASYSTEIHWDAASRLASVRYREGASLTAPDGPFLVDALTVWIGTEGKPFGVLADAKGLRGTSPEYRASASRFFRKHRDTGCIALINVGPVIHVVVEMFRVGTCIQLKTFADEAAARLWLRAKGVA
Ga0310686_11869558413300031708SoilMTAPGQMTFTGPSTEITWDSRSRVAVVRYAPGASLEGPDGPFLVDALTGWIGTAGEPFAVLADAKGLHGTNAEYRASASRFFRQHCDHAFIALTNLGPVIHVVVEMFRVGTGIQLKTFPDEAAARSWLRTKGIAA
Ga0307476_1141425013300031715Hardwood Forest SoilMTAPSASTVTCPSTQITWHSPSRVALVRYTSGAILKSQDGTFLVETLSGWVGADRETFAVLADAAGLGGTDTEYRAKASQFFRDHRDRAFIALINLGPVIHVVVEMFRVATGVPLKAFGDEASARSWLRTNGIGA
Ga0302321_10314688223300031726FenMVTVTSQSTAITWSTEQRLATVRYTPGVTLRGTDGDLLVESLSGWIGSPPEPFAVLADAAGLRGTDAEYRAKASRFFRAHHAVAFIALVNLGPVIHVVVELFRVGTGIQLKTF
Ga0307477_1044127823300031753Hardwood Forest SoilVSAPATVTSHSTEITWDAKSRIARVRYTSGASLEGPDGPFLVDALASWIGADGEPFAVLADAKGLRGTNAEYRASASRFFRQHRDQAFIALINLGPVIHIVVEMFRVGTGIQLKTFPDEAAARSWLRAKGIAA
Ga0302319_1088742323300031788BogRTNRLCRGARRRNRRVFDVRSERWCRVTPVTDRDTVTTDSMEIRWDPASRFATVRYTPGTTLGDADGVALVDALTGWIGAHGEPFAVLADGTGLRGTDGEYRARVSRFFRLHRDTACIALVHLSPVIQIVVEMFRLGTGIPLKTFSTEAAARSWLRTRGVTA
Ga0307479_1000385353300031962Hardwood Forest SoilVSAPATVTSHSTEITWDAKSRIARVRYTSGASLEGPDGPFLVDALMGWIGAAGEPFAVLADAKGLQGTNAEYRAGVSRFFRQHREHAFIALINLGPVIHVVVEMFRIGTGIQLKTLADEAAACCWLRTKGIAA
Ga0307479_1070819413300031962Hardwood Forest SoilTEITWDSRSRVAFVRYAFGASLTGPDGPFLVDALASWIGATGEPFAVLADAKGLRGTNAEYRASASRFFRQHRDHAFIALINLGPVIHVVVEMFRVGTGIQLKTFPDEAAARSWLRTKGIAA
Ga0307479_1075015613300031962Hardwood Forest SoilMTTTADHDTIKNLAAEITWDPSSRVAFVRYALDARLKAIDGPFLVDALTGWIGTSAAPFAVLADAKGLRGTDGAYRAHASKFFRQHRHTAFIAIINVGPVIHIVVEMFRIGTGIQLKTFASEPAARSWLRTKGIAA
Ga0315912_1079102213300032157SoilMVSVASLSTEIAWSVEERLASVRYTHGTILGAMDGDFLVEALKSWIGTTDEPFAVLADAAGLHGTDAEYRAKASGFFRQHRDTAFIALINLGPVIRVVVELFRIGTSIQLKAFATDAAARSWLRTKGIAV
Ga0370515_0427354_237_5573300034163Untreated Peat SoilAPGASLAGPDGPFLVDALTGWIGADGEPFAVLADAKGLRGTNAEYRASASRFFRQHRDHAFIALTNLGPVIHVVVEMFRVGTGIQLKTFPDEAAARSWLRTKGIAA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.