Metagenome / Metatranscriptome Family F087536

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087536
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	75 residues
Representative Sequence	CGPSDWSGTVHTHVALYTEDLPSTRFSAQDRGVMRRWYERWHADGVFCVVYSARDAHCEADGVVGGMRSRPVMVR
Number of Associated Samples	98
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.48 %
% of genes near scaffold ends (potentially truncated)	84.55 %
% of genes from short scaffolds (< 2000 bps)	86.36 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.455 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.909 % of family members)
Environment Ontology (ENVO)	Unclassified (24.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.545 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.59% β-sheet: 25.24% Coil/Unstructured: 61.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF04173	DoxD	42.73
PF00326	Peptidase_S9	10.00
PF07681	DoxX	8.18
PF01432	Peptidase_M3	4.55
PF04264	YceI	1.82
PF10282	Lactonase	1.82
PF12850	Metallophos_2	0.91
PF00805	Pentapeptide	0.91
PF00723	Glyco_hydro_15	0.91
PF13200	DUF4015	0.91
PF02897	Peptidase_S9_N	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	50.91
COG4270	Uncharacterized membrane protein	Function unknown [S]	8.18
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	4.55
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	4.55
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	1.82
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.91
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.91
COG1770	Protease II	Amino acid transport and metabolism [E]	0.91
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.45 %
Unclassified	root	N/A	4.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.45 %
Unclassified	root	N/A	4.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.45 %
Unclassified	root	N/A	4.55 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	51.82 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	4.55 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	4.55 %
Unclassified	root	N/A	4.55 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.91 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	51.82 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	4.55 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	4.55 %
Unclassified	root	N/A	4.55 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.91 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	39.09 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	4.55 %
Unclassified	root	N/A	4.55 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	2.73 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.82 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.91 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	39.09 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	4.55 %
Unclassified	root	N/A	4.55 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	2.73 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.82 %
Planctomycetes bacterium Pla133	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium Pla133	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	39.09 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	4.55 %
Unclassified	root	N/A	4.55 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	2.73 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.82 %
Planctomycetes bacterium Pla133	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium Pla133	0.91 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	39.09 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	4.55 %
Unclassified	root	N/A	4.55 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	2.73 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.82 %
Planctomycetes bacterium Pla133	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium Pla133	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908006\|FWIROz_GJ87FRN02FVMS4	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	533	Open in IMG/M
3300002568\|C688J35102_118850893	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	604	Open in IMG/M
3300002568\|C688J35102_119808049	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	781	Open in IMG/M
3300003267\|soilL1_10114790	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1077	Open in IMG/M
3300003321\|soilH1_10087382	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300003322\|rootL2_10305677	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300004463\|Ga0063356_104962319	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	572	Open in IMG/M
3300004479\|Ga0062595_101418478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	634	Open in IMG/M
3300005171\|Ga0066677_10237510	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300005340\|Ga0070689_100696105	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	887	Open in IMG/M
3300005467\|Ga0070706_101164093	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	709	Open in IMG/M
3300005535\|Ga0070684_100531428	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300005536\|Ga0070697_100499845	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300005549\|Ga0070704_100668968	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	918	Open in IMG/M
3300005553\|Ga0066695_10678989	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300005713\|Ga0066905_102238338	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	510	Open in IMG/M
3300005884\|Ga0075291_1032193	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	664	Open in IMG/M
3300006175\|Ga0070712_101432186	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	603	Open in IMG/M
3300006844\|Ga0075428_101854676	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	627	Open in IMG/M
3300006847\|Ga0075431_100846360	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	886	Open in IMG/M
3300006904\|Ga0075424_100660117	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300007790\|Ga0105679_10597420	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300009081\|Ga0105098_10144205	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1065	Open in IMG/M
3300009162\|Ga0075423_12668580	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	546	Open in IMG/M
3300009553\|Ga0105249_10929428	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300009840\|Ga0126313_11365410	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300010039\|Ga0126309_10192007	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300010039\|Ga0126309_10727663	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	640	Open in IMG/M
3300010041\|Ga0126312_10787577	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	689	Open in IMG/M
3300010042\|Ga0126314_11506398	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	505	Open in IMG/M
3300010166\|Ga0126306_10815052	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	753	Open in IMG/M
3300010373\|Ga0134128_11394008	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	772	Open in IMG/M
3300010400\|Ga0134122_10663087	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300010403\|Ga0134123_10370186	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1301	Open in IMG/M
3300010403\|Ga0134123_13529868	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	506	Open in IMG/M
3300012360\|Ga0137375_10487572	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300012684\|Ga0136614_10904172	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	611	Open in IMG/M
3300012943\|Ga0164241_10894351	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	649	Open in IMG/M
3300012943\|Ga0164241_11393954	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300012951\|Ga0164300_10874831	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300012957\|Ga0164303_10834826	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	638	Open in IMG/M
3300012984\|Ga0164309_10703915	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	802	Open in IMG/M
3300014263\|Ga0075324_1010952	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1486	Open in IMG/M
3300014745\|Ga0157377_10282012	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300015373\|Ga0132257_103555450	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300018028\|Ga0184608_10131644	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300018063\|Ga0184637_10136321	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300018422\|Ga0190265_13710842	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	509	Open in IMG/M
3300018429\|Ga0190272_10191359	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300018465\|Ga0190269_10471526	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300018466\|Ga0190268_10362826	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	909	Open in IMG/M
3300019259\|Ga0184646_1473546	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	519	Open in IMG/M
3300019377\|Ga0190264_11428766	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	595	Open in IMG/M
3300019877\|Ga0193722_1040532	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300019877\|Ga0193722_1077537	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300021073\|Ga0210378_10191487	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300021080\|Ga0210382_10111560	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1147	Open in IMG/M
3300021080\|Ga0210382_10136273	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1045	Open in IMG/M
3300021090\|Ga0210377_10056516	All Organisms → cellular organisms → Bacteria	2702	Open in IMG/M
3300022534\|Ga0224452_1135247	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	759	Open in IMG/M
3300022694\|Ga0222623_10018460	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2594	Open in IMG/M
3300022694\|Ga0222623_10296144	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300025326\|Ga0209342_10395088	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1175	Open in IMG/M
3300025556\|Ga0210120_1003950	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3217	Open in IMG/M
3300025795\|Ga0210114_1085993	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium Pla133	640	Open in IMG/M
3300025915\|Ga0207693_11020777	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300025920\|Ga0207649_11459332	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	541	Open in IMG/M
3300025937\|Ga0207669_10804675	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	780	Open in IMG/M
3300025944\|Ga0207661_10539745	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300025949\|Ga0207667_11237918	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	725	Open in IMG/M
3300025996\|Ga0208777_1008251	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	884	Open in IMG/M
3300026088\|Ga0207641_10371900	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300028590\|Ga0247823_10537929	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	881	Open in IMG/M
3300028608\|Ga0247819_10644582	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	642	Open in IMG/M
3300028755\|Ga0307316_10343260	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	549	Open in IMG/M
3300028799\|Ga0307284_10179146	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	827	Open in IMG/M
3300028803\|Ga0307281_10387305	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	533	Open in IMG/M
3300028811\|Ga0307292_10082406	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300028828\|Ga0307312_10433811	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	865	Open in IMG/M
3300028884\|Ga0307308_10468469	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	604	Open in IMG/M
3300028885\|Ga0307304_10133244	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1023	Open in IMG/M
3300028889\|Ga0247827_11320738	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	505	Open in IMG/M
3300030336\|Ga0247826_10130663	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300030620\|Ga0302046_10988906	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	669	Open in IMG/M
3300030620\|Ga0302046_11506289	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	520	Open in IMG/M
3300031548\|Ga0307408_100114957	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2074	Open in IMG/M
3300031548\|Ga0307408_100271623	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300031548\|Ga0307408_100489570	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1074	Open in IMG/M
3300031731\|Ga0307405_10036817	All Organisms → cellular organisms → Bacteria	2935	Open in IMG/M
3300031852\|Ga0307410_10483996	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1016	Open in IMG/M
3300031852\|Ga0307410_11063646	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	700	Open in IMG/M
3300031901\|Ga0307406_10023909	All Organisms → cellular organisms → Bacteria	3643	Open in IMG/M
3300031938\|Ga0308175_100010238	All Organisms → cellular organisms → Bacteria	7008	Open in IMG/M
3300031949\|Ga0214473_10192676	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2362	Open in IMG/M
3300031995\|Ga0307409_100829492	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	934	Open in IMG/M
3300032003\|Ga0310897_10013514	All Organisms → cellular organisms → Bacteria	2482	Open in IMG/M
3300032005\|Ga0307411_10044028	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2859	Open in IMG/M
3300032012\|Ga0310902_10063241	All Organisms → cellular organisms → Bacteria	1856	Open in IMG/M
3300032126\|Ga0307415_100631923	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	957	Open in IMG/M
3300032205\|Ga0307472_102137267	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	564	Open in IMG/M
3300033233\|Ga0334722_10559631	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	818	Open in IMG/M
3300033412\|Ga0310810_10340282	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300033475\|Ga0310811_10978411	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	746	Open in IMG/M
3300034090\|Ga0326723_0367305	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	651	Open in IMG/M
3300034178\|Ga0364934_0206548	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	744	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.27%
Host-Associated	Host-Associated	22.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.73%
Plants	Host-Associated → Plants	22.73%
Aquatic	Environmental → Aquatic	14.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.18%
Freshwater	Environmental → Aquatic → Freshwater	8.18%
Sediment	Environmental → Aquatic → Sediment	4.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.64%
Marine	Environmental → Aquatic → Marine	1.82%
Peat	Environmental → Terrestrial → Peat	0.91%
Floodplain	Environmental → Terrestrial → Floodplain	0.91%
Rhizome	Host-Associated → Plants → Rhizome	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.36%
Loam	Environmental → Terrestrial → Soil → Loam	11.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.73%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.82%
Lake	Environmental → Aquatic → Freshwater → Lake	0.91%
Ice	Environmental → Aquatic → Freshwater → Ice	0.91%
Sand	Environmental → Terrestrial → Soil → Sand	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.27%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.36%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.91%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.91%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.91%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.36%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	5.45%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.64%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.73%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.73%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.82%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.82%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.91%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.91%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.91%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.91%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908006	Soil microbial communities from sample at FACE Site Metagenome WIR_Oz2	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014254	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2	Environmental	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025556	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025795	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025996	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIROz_05826600	2124908006	Soil	VERCGPPDWAGTVHTHVALYSDDLPSKRFSAQDRGVMRRWYERWHADGVFCLVYSPRDAHCEADGVVGGMRGRPRIMR
C688J35102_1188508932	3300002568	Soil	GPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYQRWHTDGVFCLVYSRRDAHCEADGVIGGIRSQPSVTR*
C688J35102_1198080491	3300002568	Soil	MGISATGSVEECGPPTWSGTVHTHIAMYSDSLPSTRFSAQDRTAMGLWYDRWHSDGVFCLIYSSRDAYCEADGVVGGMRSQPKVVGQ*
soilL1_101147901	3300003267	Sugarcane Root And Bulk Soil	EWSGTVHSHVAEYDNGLPSTTFSAQDRGVMRRWYERWRTDGVFCVVYSRQSAHCEADGVVGGIRSRPTLTR*
soilH1_100873823	3300003321	Sugarcane Root And Bulk Soil	MSIGSDASVERCGPPDWVGTVHTHVAEYDNGVPSSTFSAQDRGVMRRWYQRWQSDGVFCVAYSARDAHCEADGVVGGMRSRPVLK*
rootL2_103056771	3300003322	Sugarcane Root And Bulk Soil	VGTVHTHVAEYDNGVPSSTFSAQDRGVMRRWYQRWQSDGVFCVAYSARDAHCEADGVVGGMRSRPVLK*
Ga0063356_1049623191	3300004463	Arabidopsis Thaliana Rhizosphere	TASVEQCGPPDWDGTVHTHVALYTEDSPSQRFSGQDRTVMRMWYDRWRTDGVFCVAYSEQSAHCEADGVVGGMRSRPRYVH*
Ga0062595_1014184782	3300004479	Soil	TVHTHVAEYDNGLPSAIFSAQDRGVMHRWYQRWQADGVFCVAYSARDAHCEADGVVGGMRSTPVLK*
Ga0066677_102375101	3300005171	Soil	VNQCGPPEWSGTVHTHIALYTKDLPSTKFSGQDRIAMRLWYDRWHTDGVFCLIYSKQDAHCEADGVVGGMRSTPRLVR*
Ga0070689_1006961051	3300005340	Switchgrass Rhizosphere	MTIASDESIERCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYQRWRADGVFCVVYSRRDAHCEADGVIGGIRSQPSVTR*
Ga0070706_1011640932	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SGTVHTHVALYTADLPSTKFSAQDRGVMRQWYERWHADGVFCLVYSARSAHCEADGVVGGMRSRPVIVR*
Ga0070684_1005314281	3300005535	Corn Rhizosphere	SHVAEYSDGLPSTTFSAQDRGVMRRWYERWRADGVFCVIYSRRDAHCEADGVVGGIRSQPSVTR*
Ga0070697_1004998453	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	PEWSGTVHSHIALYTDESPSTRFSAQDRIAMRLWYDRWHADGVFCLIYSAHDAHCEADGVAGGMHTKPRMVR*
Ga0070704_1006689682	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MGISATASIEKCGPPEWSGTVHSHIALYTDDRPSTRFSAQDRTAMRLWYDRWHSDGVFCLIYSEHDAHCEADGVVGGMRSTPRIVR*
Ga0066695_106789891	3300005553	Soil	VHTHVALYTADLPSTKFSAQDRGVMRQWYQRWHADGVFCLVYSARSAHCEADGVVGGMRSRPVIVR*
Ga0066905_1022383382	3300005713	Tropical Forest Soil	DWDGTVHTHVALYTEDSPSRRFSGQDRTVMQMWYDRWHADAVFCVVYSEQSAHCEADGVVGGLRSRPRYVH*
Ga0075291_10321932	3300005884	Rice Paddy Soil	VALYTEDSPSMRFSAQDRGVMSRWYQRWHADGVFCLVYSARDAHCEADGVVGGMRSAPVMVR*
Ga0075292_10747802	3300005887	Rice Paddy Soil	ALYTADLPSTRFSAQNRGVMSRWYERWHSDGVFCVVYSARDAHCEADGVVGGMRRGPPANVR*
Ga0070712_1014321861	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ASIERCGPPEWAGTVHTHVALYSDDLPSKRFSAQDRGVMRQWYERWHADGVFCVVYSARDAHCEADGVVGGMRARPRMMR*
Ga0075428_1018546761	3300006844	Populus Rhizosphere	ASIEQCGPPEWDGTVHTHVALYTEDSPSRRFSGQDRTVMRMWYDRWHADGVFCIAYSEQSAHCEADGVVGGMRSRPRYVH*
Ga0075431_1008463601	3300006847	Populus Rhizosphere	THVALYTEDSPSQRFSGQDRTVMRMWYDRWRSDGVFCVVYSERSAHCEADGVVGGMRSRPRVVR*
Ga0075424_1006601173	3300006904	Populus Rhizosphere	IAAYDGDRPSTRFSGQDRVVQRMWYDRWHSDGVFCVVYSEQDAHCEADGVVGGIRRSRPHTVP*
Ga0105679_105974203	3300007790	Soil	GPPDWDGTVHTHVALYTDDSPSRRFSGQDRTVMRLWYDRWHADGVFCVAYSERSAHCEADGVVGGMRSRPRYVH*
Ga0105098_101442052	3300009081	Freshwater Sediment	CGPPTWSGTVHTHVALYTDDSPSRRFSGQDRVAMSLWYDRWHADGVFCVIWSDRDARCEADGVLGGLRSRPRTAQ*
Ga0075423_126685801	3300009162	Populus Rhizosphere	IERCGPPEWAGTVHTHVAPYTGDLPSTHFSAQDRGVMRRWYERWHADGVFCLVYSAHDAHCEADGVVGGMRGRPAIVR*
Ga0105249_109294281	3300009553	Switchgrass Rhizosphere	IERCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYQRWRADGVFCVVYSRRDAHCEADGVIGGIRSQPSVTR*
Ga0126313_113654101	3300009840	Serpentine Soil	IASTASVERCGPPEWQGTVHTHVALYDDAPSKRFSAQDRGVMRQWYARWNADGVFCLVYSARDAHCEADGVIGGLRSKPILVR*
Ga0126309_101920071	3300010039	Serpentine Soil	ASVEHCGPPEWSGTVHSHIALYTEDRPSSRFSAQDRIAMRLWYDRWHADGVFCLVYSADDAHCEADGVVGGLRSPPRVVR*
Ga0126309_107276631	3300010039	Serpentine Soil	MGISATASVESCGPPNWSGTVHTHISEYANGKPSSKFSAQDRTAMRLWYDRWHSDGVFCLIYSEEDAHCEADGVVGGMRSLPRTVQ*
Ga0126312_107875772	3300010041	Serpentine Soil	GVGSSESIERCGPPKWSGTVHTHVALYSDTLPSTRFSAQDRGVMRRWYQRWHADGVFCLVYSARDAHCEADGVVGGMRARPRIAR*
Ga0126314_115063982	3300010042	Serpentine Soil	DQCGLPTCSGTLHTHIAMYSDSLPSTRFSAQDRTAMRLWYDRWHANGVFCLIYSARDAHCEADGVAGGMRSQPRVVNE*
Ga0126306_108150522	3300010166	Serpentine Soil	EECGPPTWSGTVHTHIALYTDDLPSTRFSAQDRTAMRLWYDRWHSDGVFCLIYSRENAHCEADGVVGGLRSPPRVIR*
Ga0134128_113940081	3300010373	Terrestrial Soil	CGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWHQRWHTDGVFCVVYSRRDAHCEADGVIGGIRSQPSVTR*
Ga0134122_106630873	3300010400	Terrestrial Soil	IGSDASIERCGPPDWSGTVHTHVAAYDNDVPSTTFSAQDRGVMRRWYERWQADGVFCLVYSARDAHCEADGVVGGMRSRPSMK*
Ga0134123_103701861	3300010403	Terrestrial Soil	MGISATTSVEQCGPPTWSGTVHTHIAMYTDSLPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSARDAHCEADGVVGGMRSQPRVVNE*
Ga0134123_135298682	3300010403	Terrestrial Soil	AISATASIERCGPPDWAGTVHTHIAAYDGDRPSTRFSGQDRVVQRMWYDRWHSDGVFCVVYSEQDAHCEADGVVGGIRRSRPHTVP*
Ga0105246_102869463	3300011119	Miscanthus Rhizosphere	YSDGLPSTTFSAQDRGVMRRWYQRWRADGVFCVVYSRRDAHCEADGVIGGIRSQPSVTR*
Ga0137375_104875723	3300012360	Vadose Zone Soil	GPPEWSGTVHTHVAMYSDSLPSTLFSAQDRGVMRRWYQRWHSDAVFCLLYSARDAHCEADGVVGGLRSRPTIVR*
Ga0136614_109041722	3300012684	Polar Desert Sand	VPAWAGTVHTHVAPYANGLPSRRFSAQDRGVMRRWYTRWRADGVFCVVYSARHAHCEADGVVGGVRSAPVLVEDGSS*
Ga0164241_108943511	3300012943	Soil	WSGTVHTHVALYTDDAPSKRFSGQDRIAMSLWYERWHADGVFCVVWSERDAHCEADGVVGGLRSRPRPAQ*
Ga0164241_113939542	3300012943	Soil	SGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYERWRADGVFCVVYSRRDAHCEADGVIGGIRSRPSVTR*
Ga0164300_108748311	3300012951	Soil	DWSGTVHTHVALYTEDLPSTRFSAQDRGVMRRWYERWHADGVFCVVYSARDAHCEADGVVGGMRSRPVMVK*
Ga0164303_108348261	3300012957	Soil	MGISATASIDKCGPPEWSGTVHTHIALYTEDRPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSEHDAHCEADGVVGGMRSTPRI
Ga0164309_107039152	3300012984	Soil	HVAAYDKDLPSTIFSAQDRGVMRRWYQRWQADGVFCLVYSARDAHCEADGVVGGMRSRPIVR*
Ga0075312_11444512	3300014254	Natural And Restored Wetlands	LYTDDSPSQRFSGQDRTAMQMWYDRWRADGVFCVAYSEQSAHCEADGVVGGMRSRPRYVH
Ga0075324_10109522	3300014263	Natural And Restored Wetlands	TASIEQCGPPEWDGTVHTHVALYTDDSPSQRFSGQDRTAMQMWYDRWRADGVFCVAYSEQSAHCEADGVVGGMRSRPRYVH*
Ga0157377_102820123	3300014745	Miscanthus Rhizosphere	SHVAEYSDGLPSTTFSAQDRGVMRRWYQRWRADGVFCVVYSRRDAHCEADGVIGGIRSQPSVTR*
Ga0132257_1035554501	3300015373	Arabidopsis Rhizosphere	IDKCGPPQWSGTVHTHVALYTEEAPSRRFSGQDRVAMSLWYDRWHADGVFCVVWSERDAHCEADGVAGGLRSRPRPAP*
Ga0184608_101316443	3300018028	Groundwater Sediment	GPPEWSGTVHSHIALYTDDSPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSAHDAHCEADGVMGGMRTRPHLVR
Ga0184637_101363213	3300018063	Groundwater Sediment	EQCGPPQWSGTVHSHIALYTDELPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRRR
Ga0190265_137108422	3300018422	Soil	SALASVEQCAPPAWSGTVHTHIALYSDDSPSSRFSGQDRIAMRLWYDRWHSDGVFCLIYSDRNAHCEADGVVGGMRSRPHMVR
Ga0190272_101913593	3300018429	Soil	SATRSVEECGPPRWSGTVHTHIALYTDDLPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRRKAGRR
Ga0190269_104715261	3300018465	Soil	TVHTHVALYDERGPSRRFSGQDRTVMRMWYDRWHADGVFCVVYSERDAHCEADGVVGGLRSRPRIVQ
Ga0190268_103628262	3300018466	Soil	MGISALASVEQCGPPAWSGTVHTHIALYSDDSPSSRFSGQDRVAMRLWYDRWHSDGVFCLIYSDRNAHCEADGVVGGMR
Ga0184646_14735461	3300019259	Groundwater Sediment	GTVHTHIALYTDDLPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRRKAGGR
Ga0190264_114287662	3300019377	Soil	SISATASVERCGPPEWQGTAHTHVALYTDEPSKRFSAQDRGVMRQWYGRWNADGVFCLIYSARDAHCAADGVVGGLRSRPTIVR
Ga0193722_10405321	3300019877	Soil	MGISATASIERCGPPEWSGTVHSHIALYTDDSPSTRFSAQDRTAMRLWYDRWHTDGVFCLIYSAHDAHCEADGVAGGMRTKPRMVR
Ga0193722_10775372	3300019877	Soil	GTVHTHVAMYSDSLPSTLFSAQDRGVMRRWYQRWHSDGVFCLLYSARDAHCEADGVVGGLRSRPTMVR
Ga0210378_101914872	3300021073	Groundwater Sediment	THVALYTEDSPSRRFSGQDRIAMRMWYDRWRSDGVFCIAYSEGSAHCEADGVVGGLRSRPRVVR
Ga0210381_101273593	3300021078	Groundwater Sediment	VALYTAESPSKRFSAQDRGVMRQWYERWKSDGVFCLIYSARDAHCEADGVVGGLRSRPTIVR
Ga0210382_101115601	3300021080	Groundwater Sediment	CGPPEWSGTVHSHIALYTDESPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSAHDAHCEADGVMGGMRATPLLVR
Ga0210382_101362732	3300021080	Groundwater Sediment	EWQGTAHTHVALYSDEPSKRFSAQDRGVMHQWYGRWNADGVFCVVYSARDAHCEADGVVGGLRSPPIIVR
Ga0210377_100565163	3300021090	Groundwater Sediment	PQWSGTVHTHIALYTDDLPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRSTRGRRR
Ga0224452_11352471	3300022534	Groundwater Sediment	SATRSVEQCGPPQWSGTVHTHIALYTDDLPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRRR
Ga0222623_100184601	3300022694	Groundwater Sediment	SIGISATRSVEQCGPPQWSGTVHSHIALYTDDLPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSARDAHCEADGVVGGMRRR
Ga0222623_102961442	3300022694	Groundwater Sediment	WDGTVHTHVALYTEDSPSRRFSGQDRIAMRMWYDRWRSDGVFCIAYSERSAHCEADGVVGGLRSRPRVVR
Ga0209342_103950882	3300025326	Soil	THVALYTTELPSTRFSAQDRGVMRQWYERWHADGVFCVAYSPRDARCEADGVVGGMRLPVTITH
Ga0210120_10039501	3300025556	Natural And Restored Wetlands	SCGPPEWQGTAHTHVALYTDSLPSTRFSAQDRGVMHQWYQRWNADGVFCVVYSARDAHCEADGVVGGLRSPPIIR
Ga0210114_10859932	3300025795	Natural And Restored Wetlands	CGPPDWAGTVHTHVALYTEDSPSRRFSGQDRAVMRMWYDRWRADAVFCVAYSERSAHCEADGIVGGLRSRPRYVH
Ga0207693_110207772	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VHTHVALYSDDLPSKRFSAQDRGVMRQWYERWHADGVFCVVYSARDAHCEADGVVGGMRARPRMMR
Ga0207649_114593321	3300025920	Corn Rhizosphere	RCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYERWQADGVFCVVYSRRDAHCEADGVIGGIRSQPSVTR
Ga0207669_108046751	3300025937	Miscanthus Rhizosphere	CGPSDWSGTVHTHVALYTEDLPSTRFSAQDRGVMRRWYERWHADGVFCVVYSARDAHCEADGVVGGMRSRPVMVR
Ga0207661_105397453	3300025944	Corn Rhizosphere	HSHVAEYSDGLPSTTFSAQDRGVMRRWYERWQADGVFCVVYSRRDAHCEADGVIGGIRSQPGVTR
Ga0207667_112379182	3300025949	Corn Rhizosphere	EWQGTAHTHVALYTDEPSKRFSAQDRGVMRQWYGRWNADGVFCLIYSARDARCEADGVVGGLRSRPAIVR
Ga0208777_10082511	3300025996	Rice Paddy Soil	SVERCGPPQWAGTVHTHVALYTDSLPSTRFSAQDRGVMSRWYERWHADGVFCVVYSAHDAHCEADGVVGGMHSRPRIVR
Ga0207641_103719001	3300026088	Switchgrass Rhizosphere	ERCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYERWRADGVFCVIYSRRDAHCEADGVVGGIRSQPSVTR
Ga0247823_105379291	3300028590	Soil	IERCGPPAWSGTVHSHVAEYSDGLPSTTFSAQDRGVMRRWYQRWRADGVFCVVYSRRDAHCEADGVIGGIRSEPSVTR
Ga0247819_106445822	3300028608	Soil	SLGVSATASIEQCGPPEWDGTVHTHVALYTDDSPSQRFSGQDRTAMQMWYDRWHADGVFCVAYSKQSAHCEADGVVGGMRSRPRYVH
Ga0307316_103432602	3300028755	Soil	CGPPEWSGTVHSHIALYTDDSPSTRFSAQDRTAMRLWYDRWHTDGVFCLIYSAHDAHCEADGVAGGMRTKPRMVR
Ga0307284_101791461	3300028799	Soil	ADSMSISATASVERCGPPEWQGTAHTHVALYTDAPSKRFSAQDRGVMRQWYGRWNADGVFCLIYSARDAHCEADGVVGGLRSRPVMVR
Ga0307281_103873051	3300028803	Soil	CGPPEWAGTVHTHVYLYTDSMPSTTFSAQDRGVMRMWYERWHSDGVFCVVYSARNAHCEADDVVGGMRARPRMVR
Ga0307292_100824061	3300028811	Soil	CGPPEWSGTVHSHIALYTDDSPSTRFSAQDRTAMRLWYDRWHTDGVFCLIYSAHDAHCEADGVAGGMRTKPRMIR
Ga0307312_104338111	3300028828	Soil	THVALYTDSLPSKRFSAQDRGVMHQWYGRWNADGVFCVVYSAHDAHCEADGVVGGLRSRPIIVR
Ga0307308_104684692	3300028884	Soil	TAHTHVALYSDEPSKRFSAQDRGVMHQWYGRWNADGVFCVVYSARDAHCEADGVVGGLRSPPIIVR
Ga0307304_101332441	3300028885	Soil	GTVHTHVALYADSLPSKRFSAQDRGVMHQWYARWNADGVFCLVYSAHDAHCEADGVVGGLRSPPLIVR
Ga0247827_113207381	3300028889	Soil	VHSHVAEYSDGLPSTTFSAQDRGVMRRWYQRWRADGVFCVVYSRRDAHCEADGVIGGIRSQPSVTR
Ga0247826_101306633	3300030336	Soil	VHSHVAEYSDGLPSTTFSAQDRGVMRRWYQRWRADGVFCVVYSRRDAHCEADGVIGGIRSQPGVTR
Ga0302046_109889063	3300030620	Soil	HTHVAFYTEDSPSRRFSGQDRTVMRMWYDRWRSDGVFCIVYSERSAHCEADGVIGGLRSRPRVVR
Ga0302046_115062891	3300030620	Soil	THIALYTDDRPSTRFSGQDRIAMRLWYDRWKSDGVFCLIYSSRDAHCEADGVVGGMRRRPGRR
Ga0307408_1001149572	3300031548	Rhizosphere	MGISALASVEQCGPPAWSGTVHTHIASYSDDSPSSRFSGQDRVAMRLWYDRWQSDGVFCLIYSDRNAHCEADGVVGGMRSGLRMVR
Ga0307408_1002716231	3300031548	Rhizosphere	AGTVHTHVATYDERGPSRRFSGQDRTVMRMWYDRWQADGVFCVVYSERDAHCEADGVVGGLRSRPRVVR
Ga0307408_1004895702	3300031548	Rhizosphere	MGISALASVEQCGPPAWSGTVHTHIALYSDDSPSSRFSGQDRVAMRLWYDRWHSDGVFCLIYSDRNAHCEADGVVGGMRSGARIVR
Ga0307405_100368172	3300031731	Rhizosphere	MGISALASVEQCGPPAWSGTVHTHIALYSDDSPSSRFSGQDRVAMRLWYDRWHSDGVFCLIYSDRNAHCEADGVVGGMRSGPRIVR
Ga0307410_104839961	3300031852	Rhizosphere	ISAAASVERCGPPEWSGTVHTHIALYTDDFPSTKFSAQDRTAMRLWYDRWHADGVFCLLYSREDAHCEADGVVGGLRSRPRVVQ
Ga0307410_110636462	3300031852	Rhizosphere	VHTHVALYTDSLPSKRFSAQDRGVMRQWYARWNADGVFCLVYSATDAHCEADGVVGGMRSRPTLVR
Ga0307406_100239094	3300031901	Rhizosphere	SGTVHTHIASYSDDTPSRRFSGQDRVAMRLWYDRWQSDGVFCLIYSDRNAHCEADGVVGGMRSGLRMVR
Ga0307406_105635523	3300031901	Rhizosphere	ATYDERGPSRRFSGQDRTVMRMWYDRWQADGVFCVVYSERDAHCEADGVVGGLRSRPRVV
Ga0308175_1000102381	3300031938	Soil	TVHTHVAAYDNDLPSTTFSAQDRGVMRRWYQRWQADGVFCVAYSAKDAHCEADGVVGGMRAPPVLK
Ga0214473_101926761	3300031949	Soil	AEASIERCGPPEWSGTLHTHIALYADGQPSRRFSGQDRVVMRMWYDRWHADGVFCVVYSARDANCEADGVVGGLRSRPRSAQ
Ga0307409_1008294922	3300031995	Rhizosphere	MGISALASVEECGPPAWSGTVHTHIAMYSDDSPSTRFSGQDRVAMRLWYDRWHSDGVFCLIYSDRDAHCEADGVVGGMRSRPRVVR
Ga0310897_100135144	3300032003	Soil	ISATTSVEHCGPPSWSGTVHTHIAMYSDSLPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSARDAHCEADGVVGGMRTQPRVVNE
Ga0307411_100440284	3300032005	Rhizosphere	MGISALASVEQCGPPAWSGSVHTHIALYSDDSPSSRFSGQDRVAMRLWYDRWHSDGVFCLIYSDRNAHCEADGVVGGMRSGARIVR
Ga0310902_100632413	3300032012	Soil	MGISATTSVEHCGPPTWSGTVHTHIAMYTDSLPSTRFSAQDRTAMRLWYDRWHADGVFCLIYSARDAHCEADGVVGGMRSQPRVVNE
Ga0307415_1006319232	3300032126	Rhizosphere	DSMGVSATASIEQCGPPEWDGTVHTHVALYTEDSPSQRFSGQDRTVMRMWYDRWHADGVFCVAYSDDSAHCEADRVIGGMRERPRYAP
Ga0307472_1021372671	3300032205	Hardwood Forest Soil	SISSEASIDRCGPPDWAGTVHTHVAAYDNGVPSAMFSAQDRGVMRRWYERWQSDGVFCLVYSAEEAHCEADGVVGGMRSRPVVR
Ga0334722_105596312	3300033233	Sediment	SVERCGPPEWAGTVHTHVYLYTDSMPSTTFSAQDRGVMRMWYERWHSDGVFCVVYSARNAHCEADGVVGGMRARPRMVR
Ga0310810_103402821	3300033412	Soil	DWAGTVHTHVAAYDNDQPSTIFSAQDRGVMRRWYQRWQADGVFCLIYSTRDAHCEADGVVGGMRSRPTVR
Ga0310811_109784111	3300033475	Soil	MSISSDASIEHCGPPEWSGTVHTHVAAYDHDLPSTIFSAQDRGVMRRWYQRWQADGVFCLIYSARDAHCEADGVVGGMRSRPTLR
Ga0326723_0367305_384_644	3300034090	Peat Soil	MSISSDASIDRCGPPEWAGTVHTHVAAYDDGVPSTMFSAQDRGVMRRWYERWQSDGVFCLVYSARDAHCEADGVVGGMRSRPMIVK
Ga0364934_0206548_507_743	3300034178	Sediment	VEQCGPPQWSGTVHTHIALYTDDLPSTRFSGQDRIAMRLWYDRWKSDAVFCLIYSARDAHCEADGVVGGMRSTPGLRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087536

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences