NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F087557

Metagenome Family F087557

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F087557
Family Type Metagenome
Number of Sequences 110
Average Sequence Length 70 residues
Representative Sequence VARTALSATSQRLRIALALPALLGIFGLGEAILDRRGLRLDLTPERRYTLSDHAKKILDELPADVR
Number of Associated Samples 100
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 90.65 %
% of genes near scaffold ends (potentially truncated) 97.27 %
% of genes from short scaffolds (< 2000 bps) 94.55 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.273 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(25.455 % of family members)
Environment Ontology (ENVO) Unclassified
(30.909 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.545 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 41.49%    β-sheet: 0.00%    Coil/Unstructured: 58.51%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF12679ABC2_membrane_2 48.18
PF12698ABC2_membrane_3 9.09
PF09822ABC_transp_aux 3.64
PF00005ABC_tran 3.64
PF10094DUF2332 0.91
PF03176MMPL 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG1033Predicted exporter protein, RND superfamilyGeneral function prediction only [R] 0.91
COG2409Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamilyGeneral function prediction only [R] 0.91

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.27 %
UnclassifiedrootN/A2.73 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2006207004|lwFormate_BCIX10707_g1All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium834Open in IMG/M
3300004281|Ga0066397_10049371All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300005093|Ga0062594_100700105All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300005174|Ga0066680_10189526All Organisms → cellular organisms → Bacteria1298Open in IMG/M
3300005177|Ga0066690_10179179All Organisms → cellular organisms → Bacteria1404Open in IMG/M
3300005181|Ga0066678_10814813All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300005181|Ga0066678_11002137All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300005332|Ga0066388_102900275All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300005367|Ga0070667_100969177All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300005445|Ga0070708_100209166All Organisms → cellular organisms → Bacteria1828Open in IMG/M
3300005446|Ga0066686_11004561All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300005447|Ga0066689_10436720All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300005447|Ga0066689_10572350All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300005447|Ga0066689_11035698All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300005455|Ga0070663_101331311All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300005467|Ga0070706_101481391All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300005468|Ga0070707_101425943All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300005518|Ga0070699_101246687All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300005536|Ga0070697_100683842All Organisms → cellular organisms → Bacteria905Open in IMG/M
3300005549|Ga0070704_101912054All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium550Open in IMG/M
3300005552|Ga0066701_10205903All Organisms → cellular organisms → Bacteria1207Open in IMG/M
3300005554|Ga0066661_10220432All Organisms → cellular organisms → Bacteria1176Open in IMG/M
3300005558|Ga0066698_10599475All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300005561|Ga0066699_10254390All Organisms → cellular organisms → Bacteria1241Open in IMG/M
3300005568|Ga0066703_10497951All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300005586|Ga0066691_10093010All Organisms → cellular organisms → Bacteria1684Open in IMG/M
3300005598|Ga0066706_11068010All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300005719|Ga0068861_101573838All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300005764|Ga0066903_106227176All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300006034|Ga0066656_10955229All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300006175|Ga0070712_100613416All Organisms → cellular organisms → Bacteria922Open in IMG/M
3300006797|Ga0066659_11187830All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300006800|Ga0066660_10433525All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300006806|Ga0079220_12096447All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium506Open in IMG/M
3300006845|Ga0075421_100881602All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300006871|Ga0075434_101180447All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300006903|Ga0075426_11509735All Organisms → cellular organisms → Bacteria → Proteobacteria511Open in IMG/M
3300006904|Ga0075424_100956286All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300006969|Ga0075419_10551981All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300006969|Ga0075419_11322766All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300009012|Ga0066710_102644683All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium719Open in IMG/M
3300009012|Ga0066710_103165173All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium634Open in IMG/M
3300009088|Ga0099830_10770996All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium793Open in IMG/M
3300009090|Ga0099827_10523009All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1020Open in IMG/M
3300009094|Ga0111539_13321010All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium518Open in IMG/M
3300009147|Ga0114129_13420251All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium510Open in IMG/M
3300009156|Ga0111538_12221363All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium689Open in IMG/M
3300009156|Ga0111538_12812860All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium609Open in IMG/M
3300010043|Ga0126380_11931153All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium538Open in IMG/M
3300010323|Ga0134086_10129973All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium908Open in IMG/M
3300010360|Ga0126372_10674115All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1005Open in IMG/M
3300010366|Ga0126379_12092390All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium668Open in IMG/M
3300010391|Ga0136847_11272102All Organisms → cellular organisms → Bacteria811Open in IMG/M
3300010399|Ga0134127_11702339All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium706Open in IMG/M
3300010399|Ga0134127_12141578All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium638Open in IMG/M
3300010400|Ga0134122_10391512All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1224Open in IMG/M
3300012189|Ga0137388_10532499All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1092Open in IMG/M
3300012198|Ga0137364_10317602All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1158Open in IMG/M
3300012285|Ga0137370_10537669All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium718Open in IMG/M
3300012362|Ga0137361_10413934All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1238Open in IMG/M
3300012918|Ga0137396_10474211All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium927Open in IMG/M
3300012922|Ga0137394_10240588All Organisms → cellular organisms → Bacteria1547Open in IMG/M
3300012927|Ga0137416_10427564All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1127Open in IMG/M
3300012972|Ga0134077_10083354All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1220Open in IMG/M
3300013306|Ga0163162_10812926All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1052Open in IMG/M
3300015358|Ga0134089_10310075All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium657Open in IMG/M
3300015373|Ga0132257_101863784All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium773Open in IMG/M
3300017792|Ga0163161_11176203All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium662Open in IMG/M
3300017993|Ga0187823_10347805All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium527Open in IMG/M
3300018058|Ga0187766_10896581All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium625Open in IMG/M
3300021560|Ga0126371_11264913All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium872Open in IMG/M
3300025905|Ga0207685_10478491All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium652Open in IMG/M
3300025907|Ga0207645_10260491All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1149Open in IMG/M
3300025910|Ga0207684_10444751All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1113Open in IMG/M
3300025916|Ga0207663_10083763All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2096Open in IMG/M
3300025922|Ga0207646_10471868All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1132Open in IMG/M
3300025925|Ga0207650_10394988All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1144Open in IMG/M
3300025931|Ga0207644_10959024All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium717Open in IMG/M
3300025931|Ga0207644_10992418All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium705Open in IMG/M
3300025939|Ga0207665_10667765All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium815Open in IMG/M
3300025972|Ga0207668_10298477All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1329Open in IMG/M
3300025986|Ga0207658_11405496All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium638Open in IMG/M
3300026023|Ga0207677_12315106All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium500Open in IMG/M
3300026089|Ga0207648_10193716All Organisms → cellular organisms → Bacteria1802Open in IMG/M
3300026118|Ga0207675_101192981All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium781Open in IMG/M
3300026310|Ga0209239_1158095All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium888Open in IMG/M
3300026323|Ga0209472_1101330All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1148Open in IMG/M
3300026329|Ga0209375_1039207All Organisms → cellular organisms → Bacteria2471Open in IMG/M
3300026329|Ga0209375_1177208All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium851Open in IMG/M
3300026332|Ga0209803_1086974All Organisms → cellular organisms → Bacteria1298Open in IMG/M
3300026342|Ga0209057_1249970All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium505Open in IMG/M
3300026547|Ga0209156_10366249All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium615Open in IMG/M
3300027646|Ga0209466_1112394All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium553Open in IMG/M
3300027748|Ga0209689_1153073All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1102Open in IMG/M
3300027748|Ga0209689_1207203All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium852Open in IMG/M
3300027815|Ga0209726_10063122All Organisms → cellular organisms → Bacteria2460Open in IMG/M
3300027831|Ga0209797_10469768All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium502Open in IMG/M
3300031720|Ga0307469_10769429All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium880Open in IMG/M
3300031747|Ga0318502_10382158All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium836Open in IMG/M
3300031854|Ga0310904_10347474All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium955Open in IMG/M
3300032065|Ga0318513_10252616All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium854Open in IMG/M
3300032075|Ga0310890_10919967All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium699Open in IMG/M
3300032090|Ga0318518_10229838All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium951Open in IMG/M
3300032180|Ga0307471_103121891All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium587Open in IMG/M
3300033233|Ga0334722_10737584All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium699Open in IMG/M
3300033433|Ga0326726_11462001All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium665Open in IMG/M
3300033513|Ga0316628_102922351All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium626Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil25.45%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere10.91%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere9.09%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.18%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere5.45%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.55%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.64%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.73%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.73%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.73%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.82%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.82%
SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Sediment0.91%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.91%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.91%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.91%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.91%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.91%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.91%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.91%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.91%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.91%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2006207004Sediment methylotrophic communities from Lake Washington - Formate enrichmentEnvironmentalOpen in IMG/M
3300004281Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBioEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017993Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300027646Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027831Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
LWFOR_300522006207004SedimentVARAALTARGQRLRVAAAVPALAAIFLFGLALLDRRGWRLDLTPGRRYTLSDHAERVLEALPADVRILAFLRSQDPRNVVIRDL
Ga0066397_1004937113300004281Tropical Forest SoilVAGAALSAWTQRLRLALALPALVGIFLLGQAILDARAIRLDLTPERRYTLSDHAKK
Ga0062594_10070010523300005093SoilMARAPLSARAQRLRIALAVPPLLAILLLGQGILDARGWRLDLTPERSYTLSDHAQKILDGLPADVRVI
Ga0066680_1018952613300005174SoilMARTALSATSQRLRVALALPALLGIFFLGQAILDRRGLRLDLTAERRYTLSDHAKKILDD
Ga0066690_1017917933300005177SoilMARTALSATSQRLRVALALPALLGIFFLGQAILDRRGLRLDLTAERRYTLSDHAKKILDDLPSDVRILAFLR
Ga0066678_1081481313300005181SoilVSGTGHEARAQRLRIALMVPALVGIFLLGQAILDRRAIRVDLTPENRYTLSDHARKILD
Ga0066678_1100213723300005181SoilVARTALSATSQRLRIALALPALLGIFGLGEAILDRRGLRLDLTPERRYTLSDHAKKILDELPADVR
Ga0066675_1066034623300005187SoilMRVGAQRLRIALALPALAGIFLLGQAILDRRAWRLDLTPERRYTLSDQGRK
Ga0066388_10290027523300005332Tropical Forest SoilVAGAALSAWTQRLRLALAFPALFGIFLLGQAILDARTIRLDLTPERRYTLSDHAKKILDGLPADVRVIAFLRAQDPRNLLI
Ga0070667_10096917713300005367Switchgrass RhizosphereVARAALTAGGQRLRVIAAVPALIAIFLLGQGVLDRHAWRLDLTPERRYTLSDHAERILDALTTDVRVLAFLRSQDPRNL
Ga0070708_10020916633300005445Corn, Switchgrass And Miscanthus RhizosphereMRVGAQRLRIALALPALAGIFLLGQAILDRRAWRLDLTPERRYTLSDQGRKILDG
Ga0066686_1100456113300005446SoilMRVGAQRLRIALALPALAGIFLLGQAILDRRAWRLDLTPERRYTLSDQGRKILDGLP
Ga0066689_1043672023300005447SoilMRVGAQRLRIVLALPALAGIFLLGQAILDRRAWRLDLTPERRYTLSDQGRKILD
Ga0066689_1057235013300005447SoilMARTALSATSQRLRIVLALPALVGIFGLGEAILDRRGLRLDLTPEQRYSLSDHGKKILDDLP
Ga0066689_1103569823300005447SoilVAGAALNAWTQRLRLVLAIPALVGIFFLGQAILDARAVRLDLTPERRYTLSDHARKILD
Ga0070663_10133131123300005455Corn RhizosphereVARETLTARSQRLRIVLAVPALLAIFLLGQGILDAYGVRLDLSAERRYTLSDRANKILDGLPADVRIIAFLRSQDPRNQQIDNLLRQVERRTT
Ga0070706_10148139123300005467Corn, Switchgrass And Miscanthus RhizosphereVAREALTARAERLRIVLAVPALLAIFLLGQGILDALGIRLDLTPERRYTLSDHANKIL
Ga0070707_10142594313300005468Corn, Switchgrass And Miscanthus RhizosphereMARTALSATSQRLRILLALPALVGIFGLGEAILDRRGLRLDLTPEQRYSLSDHGKKILDDLPSDVRILAFLRSQDPRNPAILDLLRRVEGRSGRIHV
Ga0070699_10124668713300005518Corn, Switchgrass And Miscanthus RhizosphereVAGASLSAWTQRLRLALALPALVGIFLLGQAILDARTIRLDLTPERRYTLSDHAKKILDGLPADVRVIAFLRAQDPRNLL
Ga0070697_10068384223300005536Corn, Switchgrass And Miscanthus RhizosphereMARTALSATSQRLRILLALPALVGIFGLGEAILDRRGLRLDLTPEQRYSLSDHGKKILD
Ga0070704_10191205423300005549Corn, Switchgrass And Miscanthus RhizosphereVARTPLSARGQRLRVVAAVPALVAIFFLGQGVLDRRGWRLDLTPERTYTLSEHAAGVLAGLTSDVRILAFLRSQDPRNMIIRDLLRQFELRSPRVTVDAV
Ga0066701_1020590313300005552SoilMRVGAQRLRIAFAVPALAGIFLLGQAILDRRAWRLDLTPERRYTLSDQGRKVL
Ga0066661_1022043213300005554SoilMARTALSATSQRLRVALALPALLGIFFLGQAILDRRGLRLDLTAERRYTLSDHAKKILDDLPSDVR
Ga0066698_1059947523300005558SoilVARTALSATSQRLRIVLALPALLGIFGLGEAILDRRGLRLDLTPERRYTLSDHAKKILDELPADVRILAFLRSQDP
Ga0066699_1025439013300005561SoilMRVGAQRLRIVLALPALAGIFLLGQAILDRRAWRLDLTPERRYTLSDQGRKILDGLPADVHVMAFL
Ga0066703_1049795123300005568SoilMARTALSATSQRLRVALALPALLGIFFLGQAILDRRGLRLDLTAERRYTLSDHARKILDDLPADVRILA
Ga0066691_1009301013300005586SoilVAGAALNAWTQRLRLVLAIPALVGIFFLGQAILDARAVRLDLTPERRYTLSDHARKILDGLPADVRVIAFLRAQDPRNLLIRDLLRQVALRSPRVH
Ga0066706_1106801013300005598SoilMRVGAQRLRIVLAVPALLGIFLLGQAILDRRAWRLDLTPERRYTLSDQGRKIL
Ga0068861_10157383823300005719Switchgrass RhizosphereMARAALSARAQRLRIALAVPPLLAILLLGQGILDARGIRFDLTPERSYTLSDHAQKILDDLPADVRIIAFLRSQDPRNQVIDNLLRQVERRTPRVTITRFEVNRHP
Ga0066903_10622717613300005764Tropical Forest SoilVAGASLTARGQRLRIALAVPALLGIFVLGIAILDRRAVRIDLTPERRHTLSDHAQKIIDGLPANVRVLAFLRTQDPRNLQ
Ga0066656_1095522923300006034SoilMRVGAQRLRIALALPALAGSFLLGQAILDRRAWRLDLTPERRYTLSDQGRKILDGLPAD
Ga0070712_10061341613300006175Corn, Switchgrass And Miscanthus RhizosphereMTPVAANEARAQRLRIVLIVPALVGIFFLGQAILDHRAIRIDLTPENRYTLSDHAGKILDGLPAPVHVIAFLRSQDPRNPLIEDLLRQVVA
Ga0066659_1118783023300006797SoilVARTALSATSQRLRIALALPALLGIFGLGEAILDRRALRLDLTPEQRYSLSDHAKKILDELPVDVRI
Ga0066660_1043352533300006800SoilMARTALSATSQRLRVALALPALLGIFFLGQAILDRRGLRLDLTAERRYTLPDHAKKILDDLPSDVRS
Ga0079220_1209644713300006806Agricultural SoilVTARAQLAAGSQRTRIALAVPALLGIFFFGQAILDRRDVRLDLNPDSRYTLSDHAQKILDGLPADVRVIAFLRAQDPRNVLIDQLLRQVSARTPRV
Ga0075421_10088160233300006845Populus RhizosphereVARAALTAGAQRLRIVLAVPALLAIFLLGQGILDAYGLRIDLTPERRYTLSDHATRILDGLPADVRILAFL
Ga0075434_10118044713300006871Populus RhizosphereVAGAALNAWTQRLRLALALPALVGIFLLGQAILDARAVRLDLTPERRYTLSDHAKKILDGLPADVRVIAFL
Ga0075426_1150973523300006903Populus RhizosphereMSRSLPAAADARRQRLRIALVVPPLVGIFFLGQAILDRRAARIDLTPESRYTLSDHARKILD
Ga0075424_10095628623300006904Populus RhizosphereVAGPTLTAAGQRLRIGLMVPALVGIFFVGQAILDRRMWRIDLTPEARYTLSDHATKILAALPADVRVIAFLRAQDPRNPLIEDMLRQV
Ga0075419_1055198123300006969Populus RhizosphereVARETLTSRSQRLRIALAVPALLAIFLLGQGILDAYGLRLDLSAERRYTLSDRANKILDGLPA
Ga0075419_1132276623300006969Populus RhizosphereMARAPLSARAQRLRIALAVPPLLAILLLGQGILDARGWRLDLTPERSYTLSDHAQKILDGLPADVRVIAFLRTQDPRN
Ga0066710_10264468323300009012Grasslands SoilVARTPLSATSQRLRIALALPALLGIFGLGEAILDRRGLRLDLTPEQRYTLSDHAKKILDDLPADVRILAFLRSQDPRNPAILDLL
Ga0066710_10316517313300009012Grasslands SoilMRVGAQRLRIVLALPALAGNFLLGQTILDRRAWRLDLTPERRYTLSDQGRKILDGLPADVHVMAFLRAQDPRNLFIR
Ga0099830_1077099613300009088Vadose Zone SoilMRAGAQRLRIALALPALAGVFLLGQAILDRRAWRLDLTPERRYTLSDQGRKVLDG
Ga0099827_1052300913300009090Vadose Zone SoilMARTALSATSQRLRVALALPALLGIFFLGQAILDRRGLRLDLTAERRYTLSDHAKKILDDLPSDVRILAFL
Ga0111539_1332101023300009094Populus RhizosphereMARAPLSARGQRLRIALAVPPLLAILLLGQGILDARGWRLDLTPERSYTLSDHAQKILDGLPADVRVIAFLRTQDPRNQVI
Ga0114129_1342025113300009147Populus RhizosphereVARAALMAGGQRLRVIAAVPALIAIFLFGQGVLDRRAWRLDLTPERRYTLSDHAERILDALTTDVRVLAFLR
Ga0111538_1222136313300009156Populus RhizosphereVARATLTASGQRLRMIAAVPALIAIFLFGQGVLDRRAWRLDLTPERRYTLSDHAERILDALTTDVRVLAFL
Ga0111538_1281286023300009156Populus RhizosphereVARETLTARSQRLRIVLAVPALLAIFLLGQGILDAYGVRLDLSAERRYTLSDRANKILDGLPADVR
Ga0126380_1193115323300010043Tropical Forest SoilVARPALTLRAQVLRVALAIPELLGIFFLGQALLDARSWRLDFTPGRRYTLSSHARQVLGGLESDVRVLAFMRSQDPRNPLIA
Ga0134086_1012997323300010323Grasslands SoilMRVGAQRLRIVLALPALAGIFLLGQAILDRRAWRLDLTPERRYTLSDQGRKILDGLPAD
Ga0126372_1067411513300010360Tropical Forest SoilVAGTALTAARQRLLILLALPALLGIFFLGQAILDHRALRLDLTPEGRYTLSDHAARVLDGLASDVRILAFLRSQDPRNTIIRDLLHQ
Ga0126378_1070765713300010361Tropical Forest SoilVARQALSPRGQAVRVALAIPALIAIFFLGQGLLDARSWRLDLTPERRYTLSEHARQVLGGLDRDVRVLAFL
Ga0126379_1209239023300010366Tropical Forest SoilVARQALSLRGQAVRVALAIPALIAIFFLGQGLLDARSWRLDLTPERRYTLSEHARRVLGGLDRDVRVLAFLRSQDPRNPLIE
Ga0136847_1127210213300010391Freshwater SedimentVTASGQRLRITLAVPALLGIFFLGQAILDRRAIRLDLTPEQRYTLSDQAEKILDALPVDVRILA
Ga0134127_1170233923300010399Terrestrial SoilMAGTTLTAHGQRLRVVAAVPALIAIFFLGQGVLDRRSWRLDLTPERRYTLSDHAE
Ga0134127_1214157823300010399Terrestrial SoilVARETLTARSQRLRIVLAVPALLAIFLLGQGILDARGWRLDLTPERSYTLSDHAQKILDGLP
Ga0134122_1039151233300010400Terrestrial SoilVRRALSAGSQRLRVALAVPALLGIFPLGQAILNAHSWRLDLTPERRYTLSDHAKRILDGLEPLGADVRIIAFLRSQDPR
Ga0137388_1053249913300012189Vadose Zone SoilMARTALSATSQRLRVALALPALLGIFFLGQAILDRRGLRLDLTAEQRYTLSDHGKKILDDLPS
Ga0137364_1031760233300012198Vadose Zone SoilMARTALSATSQRLRVALALPALLGIFFLGQAILDRRGLRLDLTAERRYTLSDHAKKILDDLL
Ga0137370_1053766913300012285Vadose Zone SoilMRVGAQRLRIALALPALAGIFLLGQAILDRRAWRLDLTPERRYTLSDQGRKVLDGLPADVHV
Ga0137361_1041393413300012362Vadose Zone SoilVAGAALNAWTQRLRLVLAIPALVGIFFLGQAILDARAVRLDLTPERRYTLSDHARKILDGLPADVRVIA
Ga0137396_1047421113300012918Vadose Zone SoilVAGSALNAWTQRLRLVLAIPALVGIFFLGQAILDARAVRLDLTPERRYTLSDHARKILDGLPADVRVIA
Ga0137394_1024058833300012922Vadose Zone SoilVAGASLSAWTQRLRLALALPALVGIFLLGQAILDARTIRLDLTPERRYTLSDHAKKILDD
Ga0137416_1042756433300012927Vadose Zone SoilMSVGAQRLRIVLALPALAGIFLLGQAILDRRAWRLDLTPESRYTLSDQGRKILDGLPA
Ga0134077_1008335433300012972Grasslands SoilVARTALSATSQRLRIVLALPALLGIFGLGEAILDRRGLRLDLTPERRYTLSDHAKKILDELP
Ga0163162_1081292623300013306Switchgrass RhizosphereLTAGGQRLRVIAAVPALVAIFLLGQGVLDRRAWRLDLTPERRYSLSDHAERILAAL
Ga0134089_1031007513300015358Grasslands SoilMRVGAQRLRIALALPALAGIFLLGQAILDRRAWRLDLTPERRYTLSDQGRKVLDGLPADVHVM
Ga0132257_10186378413300015373Arabidopsis RhizosphereVARETLTARSQRLRIVLAVPALLAIFLLGQGILDAYGVRLDLSAERRYTLSDRANKILDGLPADVRIIAFLRSQ
Ga0163161_1117620323300017792Switchgrass RhizosphereVSAWGQRLRVVLAVPALVAIFLFSQGILDARGWRLDLSPEHRYTLSDHARKVLEALPADVRVIA
Ga0187823_1034780513300017993Freshwater SedimentVARTPLSARTQRLRIALAVPALVGIFFVGQAILDHRALRLDLTPERLYTLSDQARKILDALPADVTIHAFLRTQ
Ga0187766_1089658113300018058Tropical PeatlandMNARSERLRIALAVPALFGIFLVGQAILDRRAIRLDLTPESRYTLSDHARKILDALPADVHVMAFLRSQDPRNLLIE
Ga0126371_1126491323300021560Tropical Forest SoilVARQALSFRGQAVRVALAIPPLIAIFFLGQGLLEARSWRLDLTPERRYTLSEHARRVLGGLDRDVRVLAFLRSQDPRNSL
Ga0207685_1047849123300025905Corn, Switchgrass And Miscanthus RhizosphereMARLALTARGQRLRVIAAVPALVAIFLLGQGLLDRAGWRLDLTPERRYTLSDHAERVLDGLETDIRILGFLRNQDPRNLLI
Ga0207645_1026049133300025907Miscanthus RhizosphereLTAGGQRLRVIAAVPALVAIFLLGQGVLDRRAWRLDLTPERRYSLSDHAERILAALDTDVKVLAFLRSQDPRN
Ga0207684_1044475113300025910Corn, Switchgrass And Miscanthus RhizosphereMARAALSAGSQRLRVVLALPALIGIFLLGQAILDRRGLRLDLTAERRYTLSDHARKILDDLPADVRILAFLRSQDAR
Ga0207663_1008376313300025916Corn, Switchgrass And Miscanthus RhizosphereVAGPTLTAAGQRLRIGLMVPALVGIFFVGQAILDRRMWRIDLTPEARYTLSDHATKILAALPADVRVIAFLRAQDPRNQ
Ga0207646_1047186833300025922Corn, Switchgrass And Miscanthus RhizosphereVAREALTARAERLRIVLAVPALLAIFLLGQGILDALGIRLDLTPERRYTLSDHANKILDDLPADVRIIAFLRS
Ga0207650_1039498823300025925Switchgrass RhizosphereMARAPLSARGQRLRIALAVPPLLAILLLGQGILDARGWRLDLTPERSYTLSDHAQKILDGLPA
Ga0207644_1095902423300025931Switchgrass RhizosphereVARAALSAGGQRLRVIAAVPALIAIFLLGQGVLDRRAWRLDLTPERRYTLSDHAERILDALTTD
Ga0207644_1099241813300025931Switchgrass RhizosphereVARPALTAGGQRLRVIAAVPALIAIFLLGQGVLDRRAWRLDLTPGHRYSLSDHAERILAALDTDVKV
Ga0207665_1066776513300025939Corn, Switchgrass And Miscanthus RhizosphereVAGPTLTAAGQRLRIGLMVPALVGIFFVGQAILDRRMWRIDLTPEARYTLSDHATKILAALP
Ga0207668_1029847733300025972Switchgrass RhizosphereLTAGGQRLRVIAAVPALVAIFLLGQGVLDRRAWRLDLTPERRYSLSDHAERILTALDTDVKVLAFLRSQDPRNTLIRD
Ga0207658_1140549613300025986Switchgrass RhizosphereVARAALTAGGQRLRVIAAVPALIAIFLLGQGVLDRHAWRLDLTPERRYTLSDHAERILDALTTDVRVL
Ga0207677_1231510613300026023Miscanthus RhizosphereMARAPLSARAQRLRIALAVPPLLAILLLGQGILDARGWRLDLTPERSYTLSDHAQKILDGLPADVRVIAFLRTQDP
Ga0207648_1019371613300026089Miscanthus RhizosphereLTAGGQRLRVIAAVPALVAIFLLGQGVLDRRAWRLDLTPERRYSLSDHAERILAALDTDVKVLAFLRSQDPRNML
Ga0207675_10119298123300026118Switchgrass RhizosphereMARAALSARAQRLRIALAVPPLLAILLLGQGILDARGIRFDLTPERSYTLSDHAQKILDDLPADVRIIAFLRSQDPRNQVIDNLLRQVER
Ga0209239_115809513300026310Grasslands SoilMARTALSATSQRLRVALALPALLGIFFLGQAILDRRGLRLDLTAERRYTLSDHARKILDD
Ga0209472_110133013300026323SoilMRVGAQRLRIVLALPALAGIFLLGQAILDRRAWRLDLTPERRYTLSDQGRKILDGLPADVHV
Ga0209375_103920713300026329SoilMRVGAQRLRIALALPALAGIFLLGQAILDRRAWRLDLTPERRYTLSDQGRKVLDGLP
Ga0209375_117720813300026329SoilVARTALSATSQRLRIALALPALLGIFGLGEAILDRRALRLDLTPEQRYSLSDHAKKILDELPVDVRILAF
Ga0209803_108697413300026332SoilMRVGAQRLRIALALPALAGIFLLGQAILDRRAWRLDLTPERRYTLSDQGRKVLDGLPADV
Ga0209057_124997023300026342SoilMARTALSATSQRLRVALALPALLGIFFLGQAILDRRGLRLDLTAERRYTLSDHARKILDDLPADV
Ga0209159_104055453300026343SoilMRVGAQRLRIALALPALAGIFLLGQAILDRRAWRLDLTPERRYTLSDQGRKV
Ga0209156_1036624913300026547SoilMRVGAQRLRIALALPALAGIFLLGQAILDRRAWRLDLTPERRYTLSDQGRKVLDGLPAD
Ga0209466_111239423300027646Tropical Forest SoilVTGTTDARGQRLRIALVVPPLVGIFFLGQAILDRRAVRVDLTPESRYTLSDHARKI
Ga0209689_115307313300027748SoilVAGAALNAWTQRLRLVLAIPALVGIFFLGQAILDARAVRLDLTPERRYTLSDHARKILDGLPADVRVIAFL
Ga0209689_120720323300027748SoilMARTALSATSQRLRIVLALPALVGIFGLGEAILDRRGLRLDLTPEQRYSLSDHGKKILDDLPTDVR
Ga0209726_1006312213300027815GroundwaterMARPALSATSQRLRIVAAVPALIGIFFFGQSLLDARKLRLDLTPERRYTLSDHAAKVLDGLPADVRILAFLRSQDPRNPFIRDLLGRFA
Ga0209797_1046976823300027831Wetland SedimentMARAALTAGAQRLRVAATVPALIAIFFLGLGILDALGWRLDLTPERRYSLSERATRVLAALPVDVRILAFLRSQDPRNVL
Ga0307469_1076942923300031720Hardwood Forest SoilMTAAATTSAGSERLRIAAAVPALFGIFLLGQAILDRRAIRLDLTPESRYTLSDHARKILDGLPADVRVIAFLRSQDP
Ga0318502_1038215823300031747SoilVAGAALNAWSQRLRILLAVPAILGIFLLGQLLLDRHPLRLDLTPQARYTLSDHARRVLDGLPADVRLL
Ga0310904_1034747413300031854SoilVARAALTAGGQRLRVIAAVPALIAIFLLGQGVLDRRAWRLDLTPERRYTLSDHAERILDALTTDVRVLAFLRSQDPRN
Ga0318513_1025261623300032065SoilMARPALTLRGQALRIALAIPALIGIFFLGQAILDARSWRIDLTPDRRYTLSEHARQVLGGLDRDVRVLAFLRSQDPRNPLIDDLLRQV
Ga0310890_1091996723300032075SoilMARATLSARGQRLRIALAVPPLLAILLLGQGILDSRGWRFDLTPERSYTLSDHAQKILDGLPADIRVIAFLRSQDPRNQVIDNLLRQVQRRTPRVSVERFEVNRHP
Ga0318518_1022983823300032090SoilMARPALTLRGQALRIALAIPALIGIFFLGQAILDARSWRIDLTPDRRYTLSEHARQVLGGLDRDVRVLAFLRSQDPRNPLIDDLLRQVRAVG
Ga0307471_10312189123300032180Hardwood Forest SoilMARTALSATSQRLRIVLALPALLGIFGLGEAILDRRGLRLDLTPEQRYSLSDHGKKILDDLPSD
Ga0334722_1073758423300033233SedimentVAGAALSAWTQRLRLVLAIPALVGIFFLGQAILDARAVRLDLTPERRYTLSDHARKILD
Ga0326726_1146200123300033433Peat SoilVARPALTAISQRVRIALALPALLAIFGFGQGILDRRAWRLDLTAERRYTLSDHARRVLDA
Ga0316628_10292235113300033513SoilVARPAVSAGGGRLRVLAAVPALVAIFFLGQAALDRRGWRLDLTPERRYTLSGHAEGVLRGLDADVRILGFLRS

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.