Metagenome / Metatranscriptome Family F087579

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087579
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	103 residues
Representative Sequence	MGCNLPRVTYEGYRTGDGWEVVVKRSGQPLRLLDLPLRKGEWALRILTDYLGDEGRAADLHNDFAALTIRRFTADWELTETDIEKALGEIEILRARMRIALARG
Number of Associated Samples	82
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	51.38 %
% of genes near scaffold ends (potentially truncated)	39.09 %
% of genes from short scaffolds (< 2000 bps)	83.64 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.909 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.727 % of family members)
Environment Ontology (ENVO)	Unclassified (24.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.15% β-sheet: 17.42% Coil/Unstructured: 42.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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SCOP family	SCOP domain	Representative PDB	TM-score
e.58.1.1: Viral ssDNA binding protein	d1urja_	1urj	0.54482
c.107.1.2: Exonuclease RecJ	d1ir6a_	1ir6	0.52292
f.38.1.1: Glycerol-3-phosphate transporter	d1pw4a1	1pw4	0.51737
c.92.2.3: Nitrogenase iron-molybdenum protein	d4wesb_	4wes	0.51564
a.144.1.0: automated matches	d6h7aa1	6h7a	0.51047

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00884	Sulfatase	18.18
PF13610	DDE_Tnp_IS240	1.82
PF04264	YceI	1.82
PF06803	DUF1232	1.82
PF05193	Peptidase_M16_C	0.91
PF00092	VWA	0.91
PF10415	FumaraseC_C	0.91
PF06725	3D	0.91
PF03705	CheR_N	0.91
PF06742	DUF1214	0.91
PF00155	Aminotran_1_2	0.91
PF01738	DLH	0.91
PF02771	Acyl-CoA_dh_N	0.91
PF02954	HTH_8	0.91
PF08242	Methyltransf_12	0.91
PF01381	HTH_3	0.91
PF11769	DUF3313	0.91
PF13649	Methyltransf_25	0.91
PF06863	DUF1254	0.91
PF00924	MS_channel	0.91
PF02581	TMP-TENI	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	1.82
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	1.82
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	1.82
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	1.82
COG0352	Thiamine monophosphate synthase	Coenzyme transport and metabolism [H]	0.91
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.91
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.91
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.91 %
Unclassified	root	N/A	39.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.91 %
Unclassified	root	N/A	39.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.91 %
Unclassified	root	N/A	39.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.09 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	13.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.64 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.27 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.64 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.91 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.91 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.27 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.73 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Epsilonproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.27 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.55 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.82 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.82 %
Campylobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales	0.91 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.91 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.27 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	4.55 %
Xanthobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter	1.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.82 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.91 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.91 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.91 %
Sulfurovaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Sulfurovaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.27 %
Afipia clevelandensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	3.64 %
unclassified Xanthobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → unclassified Xanthobacter	1.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.82 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.91 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	0.91 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.91 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.91 %
Sulfurovaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Sulfurovaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.27 %
Afipia clevelandensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	3.64 %
Xanthobacter sp. 126	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → unclassified Xanthobacter → Xanthobacter sp. 126	1.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.82 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.91 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	0.91 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.91 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.91 %
Sulfurovaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Sulfurovaceae	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_100548928	All Organisms → cellular organisms → Bacteria	1860	Open in IMG/M
3300002245\|JGIcombinedJ26739_101374529	Not Available	599	Open in IMG/M
3300004080\|Ga0062385_10144130	All Organisms → cellular organisms → Bacteria → Proteobacteria	1221	Open in IMG/M
3300004080\|Ga0062385_10197751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1082	Open in IMG/M
3300004082\|Ga0062384_100136288	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300004082\|Ga0062384_101009867	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300004091\|Ga0062387_100438829	Not Available	892	Open in IMG/M
3300004091\|Ga0062387_100455716	Not Available	879	Open in IMG/M
3300004091\|Ga0062387_100477672	Not Available	863	Open in IMG/M
3300004092\|Ga0062389_100182105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2035	Open in IMG/M
3300004092\|Ga0062389_100229612	All Organisms → cellular organisms → Bacteria	1858	Open in IMG/M
3300004092\|Ga0062389_100969414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1034	Open in IMG/M
3300004092\|Ga0062389_101872556	Not Available	778	Open in IMG/M
3300004092\|Ga0062389_103320786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → unclassified Xanthobacter → Xanthobacter sp. 126	603	Open in IMG/M
3300004092\|Ga0062389_103844308	Not Available	564	Open in IMG/M
3300004092\|Ga0062389_104042378	Not Available	551	Open in IMG/M
3300004104\|Ga0058891_1332766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300004152\|Ga0062386_100288696	All Organisms → cellular organisms → Bacteria → Proteobacteria	1306	Open in IMG/M
3300004152\|Ga0062386_101641795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	536	Open in IMG/M
3300004631\|Ga0058899_11271519	All Organisms → cellular organisms → Bacteria → Proteobacteria	575	Open in IMG/M
3300004631\|Ga0058899_12276904	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300004635\|Ga0062388_100321146	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300004635\|Ga0062388_100666367	All Organisms → cellular organisms → Bacteria → Proteobacteria	965	Open in IMG/M
3300005337\|Ga0070682_100307056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1166	Open in IMG/M
3300005339\|Ga0070660_100117595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2120	Open in IMG/M
3300005364\|Ga0070673_100018513	All Organisms → cellular organisms → Bacteria	4977	Open in IMG/M
3300005365\|Ga0070688_100189079	Not Available	1433	Open in IMG/M
3300005438\|Ga0070701_11263368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	526	Open in IMG/M
3300005457\|Ga0070662_101278092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	631	Open in IMG/M
3300005530\|Ga0070679_100915930	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300005535\|Ga0070684_101753642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	586	Open in IMG/M
3300005548\|Ga0070665_102401685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	529	Open in IMG/M
3300005564\|Ga0070664_100020714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5416	Open in IMG/M
3300005616\|Ga0068852_100763716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300006028\|Ga0070717_11321750	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Sulfurovaceae	655	Open in IMG/M
3300006046\|Ga0066652_100777853	Not Available	914	Open in IMG/M
3300006086\|Ga0075019_11142148	Not Available	507	Open in IMG/M
3300006175\|Ga0070712_100240401	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300006176\|Ga0070765_100233254	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300006176\|Ga0070765_101871635	Not Available	562	Open in IMG/M
3300006237\|Ga0097621_100169541	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300006358\|Ga0068871_101517237	Not Available	633	Open in IMG/M
3300006854\|Ga0075425_101358690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Xanthobacter → unclassified Xanthobacter → Xanthobacter sp. 126	805	Open in IMG/M
3300009098\|Ga0105245_10506362	All Organisms → cellular organisms → Bacteria → Acidobacteria	1224	Open in IMG/M
3300009176\|Ga0105242_10508534	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300009176\|Ga0105242_11329442	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300009177\|Ga0105248_12059803	Not Available	649	Open in IMG/M
3300010373\|Ga0134128_11099309	Not Available	878	Open in IMG/M
3300011120\|Ga0150983_15234102	Not Available	785	Open in IMG/M
3300011120\|Ga0150983_16665704	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300012189\|Ga0137388_11321484	Not Available	660	Open in IMG/M
3300012212\|Ga0150985_106262014	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300012469\|Ga0150984_110914332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	921	Open in IMG/M
3300012986\|Ga0164304_11460387	Not Available	564	Open in IMG/M
3300012987\|Ga0164307_11298970	Not Available	608	Open in IMG/M
3300012989\|Ga0164305_11930150	Not Available	537	Open in IMG/M
3300013100\|Ga0157373_10897739	Not Available	657	Open in IMG/M
3300013102\|Ga0157371_10462158	Not Available	934	Open in IMG/M
3300013307\|Ga0157372_10183021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2426	Open in IMG/M
3300014501\|Ga0182024_10082840	All Organisms → cellular organisms → Bacteria	4769	Open in IMG/M
3300014969\|Ga0157376_10232058	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1715	Open in IMG/M
3300015371\|Ga0132258_10603312	Not Available	2756	Open in IMG/M
3300015371\|Ga0132258_13222867	Not Available	1125	Open in IMG/M
3300016422\|Ga0182039_10738121	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300019881\|Ga0193707_1122960	Not Available	754	Open in IMG/M
3300020579\|Ga0210407_10012606	All Organisms → cellular organisms → Bacteria	6287	Open in IMG/M
3300020579\|Ga0210407_10447325	Not Available	1011	Open in IMG/M
3300020581\|Ga0210399_10059623	Not Available	3077	Open in IMG/M
3300020583\|Ga0210401_10366218	Not Available	1303	Open in IMG/M
3300020583\|Ga0210401_10695507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300021088\|Ga0210404_10095329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1491	Open in IMG/M
3300021168\|Ga0210406_10064253	All Organisms → cellular organisms → Bacteria	3173	Open in IMG/M
3300021168\|Ga0210406_11369474	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300021181\|Ga0210388_10345375	Not Available	1308	Open in IMG/M
3300021402\|Ga0210385_10426059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	999	Open in IMG/M
3300021404\|Ga0210389_10508078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	948	Open in IMG/M
3300021405\|Ga0210387_10118183	All Organisms → cellular organisms → Bacteria → Acidobacteria	2237	Open in IMG/M
3300021405\|Ga0210387_10284713	All Organisms → cellular organisms → Bacteria → Acidobacteria	1452	Open in IMG/M
3300021406\|Ga0210386_10046389	All Organisms → cellular organisms → Bacteria	3443	Open in IMG/M
3300021406\|Ga0210386_10665373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	898	Open in IMG/M
3300021406\|Ga0210386_10904959	Not Available	755	Open in IMG/M
3300021406\|Ga0210386_11723693	Not Available	517	Open in IMG/M
3300021420\|Ga0210394_10285721	Not Available	1446	Open in IMG/M
3300021420\|Ga0210394_10498979	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300021432\|Ga0210384_10249000	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300021478\|Ga0210402_10427278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1231	Open in IMG/M
3300021559\|Ga0210409_10145047	All Organisms → cellular organisms → Bacteria	2176	Open in IMG/M
3300022533\|Ga0242662_10341932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300025911\|Ga0207654_10046711	All Organisms → cellular organisms → Bacteria	2470	Open in IMG/M
3300025921\|Ga0207652_10889497	Not Available	787	Open in IMG/M
3300025930\|Ga0207701_10206145	Not Available	1727	Open in IMG/M
3300025931\|Ga0207644_10623781	Not Available	896	Open in IMG/M
3300025934\|Ga0207686_10354168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1106	Open in IMG/M
3300025945\|Ga0207679_10012910	All Organisms → cellular organisms → Bacteria	5464	Open in IMG/M
3300026142\|Ga0207698_10739344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300026910\|Ga0207840_1027412	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	557	Open in IMG/M
3300027768\|Ga0209772_10225361	Not Available	594	Open in IMG/M
3300027829\|Ga0209773_10448279	Not Available	533	Open in IMG/M
3300027908\|Ga0209006_10256346	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300027908\|Ga0209006_11366671	Not Available	544	Open in IMG/M
3300027911\|Ga0209698_10172960	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1759	Open in IMG/M
3300031708\|Ga0310686_105794100	All Organisms → cellular organisms → Bacteria	8280	Open in IMG/M
3300031708\|Ga0310686_109195284	Not Available	828	Open in IMG/M
3300031720\|Ga0307469_12146503	Not Available	543	Open in IMG/M
3300031754\|Ga0307475_10290034	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300031912\|Ga0306921_12012004	Not Available	615	Open in IMG/M
3300031962\|Ga0307479_11838158	Not Available	557	Open in IMG/M
3300032180\|Ga0307471_100179189	Not Available	2088	Open in IMG/M
3300033289\|Ga0310914_10277012	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.36%
Host-Associated	Host-Associated	23.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.36%
Plants	Host-Associated → Plants	23.64%
Aquatic	Environmental → Aquatic	20.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.36%
Freshwater	Environmental → Aquatic → Freshwater	18.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.55%
Sediment	Environmental → Aquatic → Sediment	1.82%
Roots	Host-Associated → Plants → Roots	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.18%
Loam	Environmental → Terrestrial → Soil → Loam	17.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.18%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	18.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.82%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	18.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.73%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026910	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 65 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1005489283	3300000955	Soil	MGGVLSRVTYKGYWTGDGWEVVVKRPSKALRLLDLPARKGQWALSILTDYLDDQDRAANLHDDFAALTIRRFTEDWELSENDIQNVLNEVEILRARLRIALARG*
JGIcombinedJ26739_1013745292	3300002245	Forest Soil	MIDCDLPGVTYKGYATSNGWEVIVKRPGQPLRPLDLPRRKGEWALSILTDYLRDQGRAADLHNDFDALTIRRFTADWELSESDIEKVLGEVEILRARLRIAFARG*
Ga0062385_101441302	3300004080	Bog Forest Soil	MEWNLPRVTYKGYWTGDGWEVIVKKPGQPMRPLNLPPRKGQWAMSILTDYLDDQGRAADLHHDFAALTIHRFTTDWELGESDIERVLGEVEILRARLRIALARG*
Ga0062385_101977512	3300004080	Bog Forest Soil	MYKGYWTGEGWEVVVKRPNQPLRLLDLPPRKGEWALSILTDYLGDEGRAASLHNDFAALTIRRFTQDWELSESDIERTLMEVEILRLRWRIALARG*
Ga0062384_1001362882	3300004082	Bog Forest Soil	LWDYENTMTIWDLPGVTYKGYWTGEGWEVIVKRTGQPLRPLDLPPRKGEWGLSILTDFLQDQGRAADLHHDFAALTIRRFTADWELSETDIENVLGEVEILRARLRIALARG*
Ga0062384_1010098671	3300004082	Bog Forest Soil	CPVTSTRGGRPLWDYGNNTTRMDCNPPGVTYKGYWTGEGWEVVVTRPGQPARLLDLPLRNGEWALSILTNYLGDEGRAADLQHDFAALTIRRFTTDWELKETDINNALTEIEILRARWRIALARG*
Ga0062387_1004388292	3300004091	Bog Forest Soil	LWDYENTMTIWDLPGVTYKGYWTGEGWEVIVKRTGQPLRPLDLPPRKGEWGLSILTDFLQDQGRAADLHHDFAALTIRRFTADWELSETDIENVL
Ga0062387_1004557162	3300004091	Bog Forest Soil	MDLIFAKVTYQGFRTSQGWEVVVKRPGQPLRLLDLPVRKGEWALSILTNYLDDAGRATDLHNDFAALTLRRFTTDWELTDSDIESALREVEMLRARLRIALARG*
Ga0062387_1004776722	3300004091	Bog Forest Soil	MSWDLPGVTYKGYWTGEGWEVIVKRTGQPMRPLDLPPRKGEWAFSILTNYLGDERRAAELHNDFAALTIRRFTSDWELSENDIENVLGEVEILWARLRIALARG*
Ga0062389_1001821052	3300004092	Bog Forest Soil	MDCNPPGVTYKGYWTGEGWEVVVTRPGQPARLLDLPLRNGEWALSILTNYLGDEGRAADLQHDFAALTIRRFTTDWELKETDINNALTEIEILRARWRIALARG*
Ga0062389_1002296122	3300004092	Bog Forest Soil	MDENLPEITYRGYWIGDGWEVIVKKPGQPLRPLDLPRRKGDWALSILTNYLGDEARAAELHHDFAALTLRRFTGDWELSEGDIDSALMEVDMLRTRWSLALARG*
Ga0062389_1009694142	3300004092	Bog Forest Soil	MGRNAPRVTYKGYWTGEGWEVVVKRPGRPLRLLDFPLRKGEWALSILTNYLGDERRAADLHNDFAALTIRRFTTDWELNESDMDDALVEIEVLRARLRIALARG*
Ga0062389_1018725561	3300004092	Bog Forest Soil	MDGNLPGITYKGYWTGDGWEVVVQRPGQRVRMLDLPRRKGEWAVSILTDYLGDSDRVADLHNDFAALTIRRFTQDWELSERDIDNALSEVEILRARLRIALARG*
Ga0062389_1033207861	3300004092	Bog Forest Soil	KVIYQGYRIGEGWEVVVKRPGQRLRLLDVPQRKGEWTMNLLTDYLGDERRAADLHYDFAALTIRLFTTDWELTECDIDEALTEIEILRARRRIASPRG*
Ga0062389_1038443082	3300004092	Bog Forest Soil	YWTGEGWEVIVKRTGQPMRPLDLPPRKGEWAFSILTNYLGDERRAAELHNDFAALTIRRFTSDWELSENDIENVLGEVEILRARLRIALARG*
Ga0062389_1040423781	3300004092	Bog Forest Soil	MVGWDLPGVTYKGYRTGEGWEVVVKRPGQPLRLLDLPQRKGEWALSLLTNYLDDPSRAEDLHNDFAALTIRRFTADWELSERDIENVL
Ga0058891_13327661	3300004104	Forest Soil	TSEGWEVVVKRSGQPLRLLDLPLRKGEWALSILTDCLGDEGRAADLHDDFAALTIRRFTSDWEMSESDIENVLMEVEILRARWRIALARG*
Ga0062386_1002886961	3300004152	Bog Forest Soil	GLPGVMYQGYWTGEGWEVVVKKPGQRMRLLDLPRRKGEWALSILTDYLGDEGRAADLHHDFAALTIRRFTADWELSEDDIDNALMEVEILRARLRIALARG*
Ga0062386_1016417951	3300004152	Bog Forest Soil	VPAKLFLGTLWDDDKMGSNQIKVTYRGYWTEAGWEVVVERLGQRPRMLDLPKRKGEWALSILRNYLGDEGRAADLHNDFAALTIRRFTTDWELSETDIDNALIEVEILRARWRIALARA*
Ga0058899_112715192	3300004631	Forest Soil	NKVTYKGYRTAEGWEVVVKRPGNPLRLLDLPRRSEEWAHSILRDYLGDEGRAADLHHDFAALTIRRFTEDWELTESNIEDALMEVEILRARWRIALARG*
Ga0058899_122769042	3300004631	Forest Soil	GYWTGEGWEVVVKRPGQRMRLLDLPRRQGEWAHSILMDYLGDEGRAADLHHDFGELTIRRLNGDWELRASDIEAALTEVEILRARWRIALARG*
Ga0062388_1003211462	3300004635	Bog Forest Soil	MDCNPPGVTYKGYWTGEGWEVVVTRPGQPARLLDLPLRKGEWALSILTNYLGDEGRAADLQHDFAALTIRRFTTDWELKETDINNALTEIEILRARWRIALARG*
Ga0062388_1006663672	3300004635	Bog Forest Soil	MTSENLPKVTYKGYRTGEGWEVIVKRPGQPLRPLDLPPRKGEWAVSILANYLEDRGRAEDLHNDFAALTIRRFTADWELSESDIDNVLREVEILRARLRIALARG*
Ga0070682_1003070562	3300005337	Corn Rhizosphere	EGWEVAVKRHGQPLRLLDLPHRKGEWALSILADYLSDEARAAELHNDFAALTIRRFTENWELKDSDIDNTLMQVEILRARWRIALARG*
Ga0070660_1001175951	3300005339	Corn Rhizosphere	MGCNLPRVTYEGYRTGDGWEVVVKRLGQPLRLLDLPLRKGEWALRILTDYLGDEGRAADLHNDFAALTIRRFTADWELTETDIEKALGEIEILRARMRIALARG*
Ga0070673_1000185136	3300005364	Switchgrass Rhizosphere	MKKMGLNPAGVTYKGYWTGKDWEVIVKRPGQPLRPLDLPRRKGEWAMSILTDYLDDQGRAADLQNDFAALTIRRFTADWELSESEIQNVLREVEILRARLRIALARG*
Ga0070688_1001890792	3300005365	Switchgrass Rhizosphere	MGQDLPRVTYRGYWTGDGWEVIVKRPTQPSRPLDLPPRKGQWALSILTDCLGDPGRAADLHNDFAALTIRRFTADWELSETDIQNVLGEVEILRARLRIALARG*
Ga0070701_112633681	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MGWNLPKVTYKGYRTSEGWEVVMKRAGQPLRLLDLPRRKEDWALSILTDYLGDEGRAADLHNDFAALTIRRFTSDWELNESDIDNALMEVEILRAQWRIALARG*
Ga0070662_1012780921	3300005457	Corn Rhizosphere	RAGEAQLRDRCALWNHGNSTTMGCNLPRVTYEGYRTGDGWEVVVKRLGQPLRLLDLPLRKGEWALRILTDYLGDEGRAADLHNDFAALTIRRFTADWELTETDIEKALGEIEILRARMRIALARG*
Ga0070679_1009159302	3300005530	Corn Rhizosphere	MSWNLTRVTYKGYRTVEGWEVAVKRHGQPLRLLDLPHRKGEWALSILADYLSDEARAAELHNDFAALTIRRFTENWELKDSDIDNTLMQVEILRARWRIALARG*
Ga0070684_1017536421	3300005535	Corn Rhizosphere	LPRVTYEGYRTGDGWEVVVKRLGQPLRLLDLPLRKGEWALRILTDYLGDEGRAADLHNDFAALTIRRFTADWELTETDIEKALGEIEILRARMRIALARG*
Ga0070665_1024016851	3300005548	Switchgrass Rhizosphere	CALWNHGNSTTMGCNLPRVTYEGYRTGDGWEVVVKRLGQPLRLLDLPLRKGEWALRILTDYLGDEGRAADLHNDFAALTIRRFTADWELTETDIEKALGEIEILRARMRIALARG*
Ga0070664_1000207143	3300005564	Corn Rhizosphere	MGCNLPRVTYEGYRTGDGWEVVVKRLGQPLRLLDLPLRKGEWALRILTDYLGDEGRGADLHNDFAALTIRRFTADWELTETDIEKALGEIEILRARMRIALARG*
Ga0068852_1007637161	3300005616	Corn Rhizosphere	GWEVAVKRHGQPLRLLDLPHRKGEWALSILADYLSDEARAAELHNDFAALTIRRFTENWELKDSDIDNTLMQVEILRARWRIALARG*
Ga0070717_113217501	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ITFKGYWTGDGWEVVVKRAGQRVRLLDLPRDKSDWALHILTDYLGDEDRAGDLHKDFAALTVRRFSGDWELNESDIEDALMEVEMLRARFRIAFARG*
Ga0066652_1007778532	3300006046	Soil	MGLNPPGVMYKGYRTGEGWEVIVKRPGQPWRPLDLPRRKGEWALSILTDYLDDQGRAADLHNDFAALTIRRFTRDWELSESDIENVLGEVETLRTRLRIALARG*
Ga0075019_111421481	3300006086	Watersheds	MMDRNLTKVTYRGYRTGLGWEVVVQRPGQGLRLLELPRTKGGWARIILTDYLKDESRAADLHEDFDALTIGRFTEDWELNEKDIELALMEVEILRARWRTVLLRG*
Ga0070712_1002404012	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDWNPPKVTYKGYRTSKGWEVVMERAGQPLRLLDLPRRKGEWALSILTDYLGDEGRAADIHYDFAALTIRRFTEDWELSESDIESALLEVETLRAQWRIALARG*
Ga0070765_1002332541	3300006176	Soil	MGLSPAKVTYRGFRTGQRWEVVVKRAGQPVRLLALPRREGEWALSILADYLGDEARAADLHHDFAGLTIRRFTQDWELSERDIENALMEVEILRARWRIALARG*
Ga0070765_1018716352	3300006176	Soil	MSPNRPGPTYNGYRIRDGWEIVVKTAGQPLRLLDRPLREGELALNLLADYLGDERRAAELHSDFAALTIRRFTADWELSGSDIDKALTEVEILRARLRIALARG*
Ga0097621_1001695413	3300006237	Miscanthus Rhizosphere	GWEVVVKRLGQPLRLLDLPLRKGEWALRILTDYLGDEGRAADLHNDFAALTIRRFTADWELTETDIEKALGEIEILRARMRIALARG*
Ga0068871_1015172371	3300006358	Miscanthus Rhizosphere	GYRTSKGWEVVMERAGQPLRLLDLPRRKGEWALSILTDYLGDEGRAADIHYDFAALTIRRFTEDWELSESDIESALLEVETLRARWRIALARG*
Ga0075425_1013586901	3300006854	Populus Rhizosphere	MGWNPPKVTYKGYRTSKGWEVVMERAGQPLRLLDLPRRKEEWALSILTDYLGDEGRAADIHYDFAALTIRRFTEDWELSESDIESALLEVETLRAQWRIALARG*
Ga0105245_105063621	3300009098	Miscanthus Rhizosphere	MGWTPPEVTYKGYRTSEGWEIAVKRSGQPLRLLDPPPRKADWALPALTDYLGDETRAANLHRDFAALAGPRFTGDWELTARDIENILTELEILRSRWRIALTRG*
Ga0105242_105085342	3300009176	Miscanthus Rhizosphere	MADSKYLRSTARPWDYEVIIRMGWNRAGVMYKGYRVAEGWEVVVKRSGQPMRMLDLPLRKGEWALRILTDYLGDEGRAADLHNDFASITIRRFTTDWELSKSDIDKALMEVEILRARLRIALARG*
Ga0105242_113294422	3300009176	Miscanthus Rhizosphere	MGEIRGKVTYKGYRTGNGWEVVVKRPGQPLRPLDLPPRKGEWAVSILTDYLDDQGRAADLHNDFAVLTIRRFTADWELSESDIENVLNEVDILRARLHIALARG*
Ga0105248_120598032	3300009177	Switchgrass Rhizosphere	FDGNGRRCLRPLWDYGNITTMGRNLPGVTYTGYVAGEGWEVVVKKPGQRLRLLDLPLHKGEWALRILTDYLGDEGRAADLHNDFAALTIRRFTADWELNESDIDNALMEVEILRARWRIALARG*
Ga0134128_110993091	3300010373	Terrestrial Soil	MGCNLPRVTYEGYRTGDDWEVVVKRPGQPLRLLDLPLRKGEWALRILTDYLGDEGRAADLHNDFAALTIRRFTADRELTETDIEKALGEIEILRARMRIPLARG*
Ga0150983_152341022	3300011120	Forest Soil	GLASVTYNGFRTSEGWEVVVKRSGQPLRLLDLPLRKGEWALSILTDCLGDEGRAADLHDDFAALTIRRFTSDWEMSESDIENVLMEVEILRARWRIALARG*
Ga0150983_166657042	3300011120	Forest Soil	SEVKYEGYWTGEGWEVVVKRPGQRMRLLDLPRRQGEWAHSILMDYLGDEGRAADLHHDFGELTIRRLNGDWELRASDIEAALTEVEILRARWRIALARG*
Ga0137388_113214841	3300012189	Vadose Zone Soil	MGLSLAKVTYQGFRTREGWEVVVKRPGQSLRLLDLPQRSGEWALRILTDYLGDEGRAADLHNDFAALTIRRFTADWELSESHIDSALMEVEILRARWRIALARG*
Ga0150985_1062620142	3300012212	Avena Fatua Rhizosphere	CRIGEGWEIVVKKPGQRLRLLDVPLRKGEWAINLLTDYLGDERRAADLHDDFAALTIRRFTTDWELSESEIEDALTEVEILRARWRMALARG*
Ga0150984_1109143323	3300012469	Avena Fatua Rhizosphere	SSDLALSRVTYQGYRIGEGWEIVVKKPGQRLRLLDVPLRKGEWAINLLTDYLGDERRAADLHDDFAALTIRRFTTDWELSESEIEDALTEVEILRARWRMALARG*
Ga0164304_114603871	3300012986	Soil	PRVTYEGYRTGDDWEVVVKRPGQPLRLLDLPLRKGEWALRILTDYLGDEGRGADLHNDFAALTIRRFTADWELTETDIEKALGEIEILRARMRIALARG*
Ga0164307_112989701	3300012987	Soil	RTGDDWEVVVKRPGQPLRLLDLPLRKGEWALRILTDYLGDEGRAADLHNDFAALTIRRFTADWELTETDIEKALGEIEILRARMRIALARG*
Ga0164305_119301501	3300012989	Soil	MGCNLPRVTYEGYRTGDDWEVVVKRPGQPLRLLDLPLRKGEWALRILTDYLGDEGRAADLHNDFAALTIRRFTADWELTETDIERALVEIEILRARMRIALARG*
Ga0157373_108977391	3300013100	Corn Rhizosphere	MGCNLPRVTYEGYRTGDDWEVVVKRPGQPLRLLDLPLRKGEWALRILTDYLGDEGRAADLHNDFAALTIRRFTADWELTETDIEKALGEIEILRARMRIALARG*
Ga0157371_104621582	3300013102	Corn Rhizosphere	MGCNLPRVTYEGYRTGDGWEVVVKRLGQPLRLLDVPLRKGEWALRILTDYLGDEGRAADLHNDFAALTIRRFTADWELTETDIEKALGEIEILRARMRIALARG*
Ga0157372_101830211	3300013307	Corn Rhizosphere	RVTYEGYRTGDGWEVVVKRLGQPLRLLDLPLRKGEWALRILTDYLGDEGRAADLHNDFAALTIRRFTADWELTETDIEKALGEIEILRARMRIALARG*
Ga0182024_100828409	3300014501	Permafrost	VEAASIRTRNSISLNIRRSFFSLWDDEDTVGNVPKVTYKGYRTAGGWEVVVERRGERLRLLDLPLRKGEWALSVLTDYLGDEGRAADLHSDFAALTIRRFKVDWELSETDIDNALMEVEIVRLRWRIALARG*
Ga0157376_102320581	3300014969	Miscanthus Rhizosphere	MGCNLPRVTYEGYRTGDGWEVVVKRSGQPLRLLDLPLRKGEWALRILTDYLGDEGRAADLHNDFAALTIRRFTADWELTETDIEKALGEIEILRARMRIALARG*
Ga0132258_106033125	3300015371	Arabidopsis Rhizosphere	YKGFLTAGGWEIVVERPGQPLRLLDVPQRAGEWALRILFDYLGNEDRARDLHEEFAAVTIRRFSKDWELTGNDIEDALLEVEILRARWRIALMRG*
Ga0132258_132228671	3300015371	Arabidopsis Rhizosphere	MDWNLAQVTYQGFWTGTGWEVVVKRPGQRLRLLELPRSKGEWARSILTDYLSDEGRAADLHEDFAALTIRRFTEDWELSANDIENSL
Ga0182039_107381211	3300016422	Soil	MNRNLTTVTYQGFRTGGGWEVAVARPGQPLRLLDLPSRPGELASILLTDFLGDPARAADLHRDFASLTIDRFTDDWELSGSDIENAIMEVEILRARWRVAITRG
Ga0193707_11229601	3300019881	Soil	MCRNPQAVTYKGYAAGEGWEVVVKRPGQPLRLLDLPVRKGEWALRILTDYLGDEGRAADLHNDFAALTIRRFTTDWELSESDIDKALTEIEILRARLRIALARG
Ga0210407_100126064	3300020579	Soil	MWDHRHITTMGLASVTYNGFRTSEGWEVVVKRSGQPLRLLDLPLRKGEWALSILTDCLGDEGRAADLHDDFAALTIRRFTSDWEMSESDIENVLMEVEILRARWRIALARG
Ga0210407_104473252	3300020579	Soil	MGCNLPGAVTYKGYWTGEGWEVVAKRPGQRLRLLDLPRHQREWALSILTDYLGDEDHAADLHNDFAALTIRRFSVDWELSECDIEDALLEVEILRARWRIALARG
Ga0210399_100596231	3300020581	Soil	MWDHRHITTMGLASVTYNGFRTSEGWEVVVKRSGQPLRLLDLPLRKGEWALSILTDCLGDEGRAADLHDDFAALTIRRFTSDWEMSESDIENVLMEGEI
Ga0210401_103662182	3300020583	Soil	MMDWNLPGVTYKGYWTGEGWEVVVKRTGQPLRPLDLPRRKGEWAMSILTDYLHDQGRAADLHNDFAALTIRRFTADWELSENDIENVLGEIEVLRARLQIALARG
Ga0210401_106955071	3300020583	Soil	ASVTYNGFRTSEGWEVVVKRSGQPLRLLDLPLRKGEWALSILTDCLGDEGRAADLHDDFAALTIRRFTSDWEMSESDIENVLMEVEILRARWRIALARG
Ga0210404_100953293	3300021088	Soil	MGLASVTYNGFRTSEGWEVVVKRSGQPLRLLTLPLRKGEWALSILTDCLGDEGRAADLHDDFAALTIRRFTSDWEMSESDIENVLMEVEILRARWRIALARG
Ga0210406_100642533	3300021168	Soil	MGSGLPGVTYQGYRAGEVWEIVVKRPGQPIRLLDLPQCPAEWALNMLTDYLGDEVRAAEVHHDFAALTSRRFTGDWELSGSDLEQALMEVEVLRARLRIALARG
Ga0210406_113694742	3300021168	Soil	AGWEVVVARPGQRLRLLDLPQRKGEWALSILKNYLGDEGRAADLHNDFDALTIRRFKADWELSESDIESALMEVEILRARWRIALARG
Ga0210388_103453751	3300021181	Soil	MVDGRVRKITYKGYRTGEGWEVVVARPNQRLRMLDLPQRKGEWALNILTNYLGDEARAADLHNDFAALTIRRFTQDWELSESDIDNALMEVEILRARLRIALARG
Ga0210385_104260591	3300021402	Soil	TYRGFRAGEGWEVAVKRPGQPLRLLDLPQRRGEWALRILTNYLGDEDRAADLHQDFAALSIRRFTEDWEMSESDIEKTLVEVETVRARWHLALARG
Ga0210389_105080781	3300021404	Soil	VAVKRPGQPLRLLDLPQRRGEWALRILTNYLGDEDRAADLHQDFAALSIRQFTEDWEMGESDIEKTLVEVETVRARWHLALARG
Ga0210387_101181833	3300021405	Soil	YQGYWTGEGWEVIVKRPGQPLRPLNLPPRKGEWALSILTDFLGDSGRASELHNDFAALTIRRFKSDWELSEGDVVNALGEVELLRARLRIALARA
Ga0210387_102847133	3300021405	Soil	IRDGWEIVVKTAGQPLRLLDRPLREGELALNLLADYLGDERRAAELHSDFAALTIRRFTADWELSGSDIDKALTEVEILRARLRIALARG
Ga0210386_100463892	3300021406	Soil	MDWNLPGVTYKGYWTGEGWEVVVKRTGQPLRPLDLPRRKGEWAMSILTDYLHDQGRAADLHNDFAALTIRRFTADWELSENDIENVLGEIEVLRARLQIALARG
Ga0210386_106653732	3300021406	Soil	MACSLAKVTYRGFRAGEGWEVAVKRPGQPLRLLDLPQRRGEWALRILTNYLGDEDRAADLHQDFAALSIRRFTEDWEMSESDIEKTLVEVETVRARWHLALARG
Ga0210386_109049592	3300021406	Soil	MVDGKVRKITYKGYRTGEGWEVVVARPNQRLRMLDLPQRKGEWALNILTNYLGDEARAADLHNDFAALTIRRFTQDWELSESDIDNALMEVEILRARLRIALARG
Ga0210386_117236932	3300021406	Soil	MGRNAQVTYKGFGTGDGWEVAVKRPGQPLRLLDLPVRKGEWALRILTDYLGDESRAEDLYHDFAALTIRRFTSDWELRENDIDNALTEVEILRARLRIALA
Ga0210386_117489881	3300021406	Soil	MWDHRHITTMGLASVTYNGFRTSEGWEVVVKRSGQPLRLLTLPLRKGEWALSILTDCLGDEGRAADLHDDFAALTIRRFTSDWEMSESDIEN
Ga0210394_102857212	3300021420	Soil	MGCNLPGAITYKGYWTGEGWEVVAKRPGQRLRLLDLPRHQREWALSILTDYLGDEDHAADLHNDFAALTIRRFSVDWELSECDIEDALLEVEILRARWRIALARG
Ga0210394_104989792	3300021420	Soil	NQRGVMYRGYWTGEGWEVVVKRPGQPARMLDLPLRKGEWGLPILTDYLGDENRAAGLHHDFAALTIRRFTQDWELSETNIESTLMEVEILRARWLIALARG
Ga0210384_102490002	3300021432	Soil	MGWNQLKVTYKGYWTEGGWEVVVERPGQRLRLLDLPGRKGEWALSILNNYLGDEGRAADLHNDFDALTIRRFKTDWELSEKDIDNALMEIEILRARWRIALARG
Ga0210402_104272783	3300021478	Soil	MDWNLAKVTYKGFRTSAGWEVVVKRAGQRLRLLELPRNKSEWARSILADYLNDERRVADLHEDFAALTIRRLAEDWELSASDIENSLMEVEILRARWRAALLRG
Ga0210409_101450473	3300021559	Soil	MWDHRHITTMGLASVTYNGFRTSEGWEVVVKRSGQPLRLLTLPLRKGEWALSILTDCLGDEGRAADLHDDFAALTIRRFTSDWEMSESDIENVLMEVEILRARWRIALARG
Ga0242662_103419321	3300022533	Soil	LASVTYNGFRTSEGWEVVVKRSGQPLRLLDLPLRKGEWALSILTDCLGDEGRAADLHDDFAALTIRRFTSDWEMSESDIENVLMEVEILRARWRIALARG
Ga0207654_100467112	3300025911	Corn Rhizosphere	MSWNLTRVTYKGYRTVEGWEVAVKRHGQPLRLLDLPHRKGEWALSILADYLSDEARAAELHNDFAALTIRRFTENWELKDSDIDNTLMQVEILRARWRIALARG
Ga0207652_108894971	3300025921	Corn Rhizosphere	MSWNLTRVTYKGYRTVEGWEVAVKRHGQPLRLLDLPHRKGEWALSILANYLSDEARAAELHNDFAALTIRRFTENWELKDSDIDNTLMQVEILRARWRIALARG
Ga0207701_102061453	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	QDLPRVTYRGYWTGDGWEVIVKRPTQPSRPLDLPPRKGQWALSILTDCLGDPGRAADLHNDFAALTIRRFTADWELSETDIQNVLGEVEILRARLRIALARG
Ga0207644_106237811	3300025931	Switchgrass Rhizosphere	MKKMGLNPAGVTYKGYWTGKDWEVIVKRPGQPLRPLDLPRRKGEWAMSILTDYLDDQGRAADLQNDFAALTIRRFTADWELSESEIQNVLREVEILRARLRIALARG
Ga0207686_103541682	3300025934	Miscanthus Rhizosphere	MYKGYRVAEGWEVVVKRSGQPMRMLDLPLRKGEWALRILTDYLGDEGRAADLHNDFASITIRRFTTDWELSKSDIDKALMEVEILRARLRIALARG
Ga0207679_100129102	3300025945	Corn Rhizosphere	MGCNLPRVTYEGYRTGDGWEVVVKRLGQPLRLLDLPLRKGEWALRILTDYLGDEGRGADLHNDFAALTIRRFTADWELTETDIEKALGEIEILRARMRIALARG
Ga0207698_107393442	3300026142	Corn Rhizosphere	GWEVAVKRHGQPLRLLDLPHRKGEWALSILADYLSDEARAAELHNDFAALTIRRFTENWELKDSDIDNTLMQVEILRARWRIALARG
Ga0207840_10274121	3300026910	Tropical Forest Soil	MMDRNLTKVTYRGYRTGLGWEVVVQRAGQGLRLLELPRTKREWARIILTDYLKDEGRAADLHEDFDALTIGRYTEDWELSEKDIDLALMEVEILRARWRTVLLRG
Ga0209772_102253612	3300027768	Bog Forest Soil	MTASSWDHGNISMTSENLPKVTYKGYRTGEGWEVIVKRPGQPLRPLDLPPRKGEWAVSILANYLEDRGRAEDLHNDFAALTIRRFTADWELSESDIDNVLREVEILRARLRIALARG
Ga0209773_104482791	3300027829	Bog Forest Soil	MKWPRRLVQNLCRYRPARDGRSLWDYENTMTIWDLPGVTYKGYWTGEGWEVIVKRTGQPLRPLDLPPRKGEWGLSILTDFLQDQGRAADLHHDFAALTIRRFTADWELSETDIENVLGEVEILRARLRIAL
Ga0209006_102563462	3300027908	Forest Soil	MGWDLAGVSYKGYRTGEGWEVVVHRPGKPVRMLDLPRRKGAWALSLLTDYLGDEGRAADLHNDFAALTIRRFTADWELRGSDIENALMEVEILRARLRIALARG
Ga0209006_113666711	3300027908	Forest Soil	MARLSVVRSVSLWDHESSTMIGCNLPEVTYQGYWTGEGWEVIVKRPGQPLRPLNLPPRKGEWALSILTDFLGDSGRASELHNDFAALTIRRFKSDWELSEGDVVNALGEVELLRARLRIALARA
Ga0209698_101729603	3300027911	Watersheds	SGVTYQGYRIGEGWEIVVKRPGQPLRLLDLPRRKGEWALSILTDYLCDEDRAEDLHHEFAALTICRFTTDWELSQSDIENALMEVEILRARWRIALARG
Ga0310686_1057941004	3300031708	Soil	MGWNVSKVTYKGYRTAEGWEVAVKRPGQPLRLLDLPLRAGEWALSILSDYLGDASRAAELHNDFAALTIRRFTADWELSESDIDGTLTEVEILRARVRIALARG
Ga0310686_1091952842	3300031708	Soil	MEPSLAKVTYQGFRTGAGWEIVVNRPGQRLRLLDLPRCKGEWALNLLRDYLEDEDRATDLHNDFAAITIRRFTGDWELSENDIENALKEIEILRARLRIALARG
Ga0307469_121465031	3300031720	Hardwood Forest Soil	MGLASVTYNGFRTSEGWEVVVKRSGQPLRLLDLPLRKGEWALSILTDCLGDEGRAADLHDDFAALTIRRFTSDWEMSESDIENVLMEVEILRARWRIALARG
Ga0307475_102900342	3300031754	Hardwood Forest Soil	MGLASVTYNGFRTSEGWEVVVKRSGQPLRLLDLPLRKGEWALSILTDCLGDEGRAADLHDDFAALTIRRFTSDWEMSASDIENVLMEVEILRARWRIALARG
Ga0306921_120120041	3300031912	Soil	MGLNLAKVTYQGFRTSEGWEVVVKRPGQRLRLLELPSNGKWAFSILKDYLGDEYRAADLHNDFAALTIRRFTEDWEMSESEIEQVLAEVEILRLRWRVVLAKG
Ga0307479_118381581	3300031962	Hardwood Forest Soil	MGWNLPKVTYKGYRTSEGWEVVMKRAGQPLRLLDLPRRKGEWALGILTDYLGDEERAADLHNDFAALTIRRFTADWELNESDIESALLEVEILRARWRIALARG
Ga0307471_1001791892	3300032180	Hardwood Forest Soil	MGWNPPKVTYKGYRTSKGWEVVMERAGQPLRLLDLPRRKEEWALSILTDYLGDEGRAADIHYDFAALTIRRFTEDWELSESDIESALLEVETLRAQWRIALARG
Ga0310914_102770121	3300033289	Soil	GLPAVTYQGYRAGEVWEIVVTRPGQPMRLLDLPRCHAEWALNMLTDYLGDQVRAAEVHHDFAALTSRRFTGDWELSGSDLEQALMEVEILRARLRIALARG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087579

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences