Metagenome Family F087583

Basic Information
Family ID	F087583
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	63 residues
Representative Sequence	MNLDEQENGSDRQCQGVSPTDEPCNLPATVHCVKCDQWFCDVHAEDDKWHACMLVEGEEGGEA
Number of Associated Samples	89
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.64 %
% of genes near scaffold ends (potentially truncated)	30.00 %
% of genes from short scaffolds (< 2000 bps)	78.18 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Bacteria (99.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (13.636 % of family members)
Environment Ontology (ENVO)	Unclassified (31.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.091 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.49% β-sheet: 10.99% Coil/Unstructured: 83.52%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF07969	Amidohydro_3	33.64
PF13594	Obsolete Pfam Family	8.18
PF07238	PilZ	5.45
PF08448	PAS_4	1.82
PF00072	Response_reg	0.91
PF00291	PALP	0.91
PF03544	TonB_C	0.91
PF00982	Glyco_transf_20	0.91
PF04389	Peptidase_M28	0.91
PF00459	Inositol_P	0.91
PF13490	zf-HC2	0.91
PF00150	Cellulase	0.91
PF07681	DoxX	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.91
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.91
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.91
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	0.91
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	0.91
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.45 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.45 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.91 %
Unclassified	root	N/A	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17093702	All Organisms → cellular organisms → Bacteria	62496	Open in IMG/M
2162886013\|SwBSRL2_contig_7459445	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101498190	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101499548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300000559\|F14TC_100507672	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1021783	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300001431\|F14TB_102510299	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300004114\|Ga0062593_100000334	All Organisms → cellular organisms → Bacteria	14161	Open in IMG/M
3300004479\|Ga0062595_100056553	All Organisms → cellular organisms → Bacteria → Acidobacteria	1834	Open in IMG/M
3300004479\|Ga0062595_100246311	All Organisms → cellular organisms → Bacteria → Acidobacteria	1154	Open in IMG/M
3300004479\|Ga0062595_100285086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1101	Open in IMG/M
3300004633\|Ga0066395_10004977	All Organisms → cellular organisms → Bacteria	4633	Open in IMG/M
3300005293\|Ga0065715_10245008	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300005332\|Ga0066388_100164817	All Organisms → cellular organisms → Bacteria	2810	Open in IMG/M
3300005332\|Ga0066388_100217673	All Organisms → cellular organisms → Bacteria	2538	Open in IMG/M
3300005332\|Ga0066388_100273003	All Organisms → cellular organisms → Bacteria	2333	Open in IMG/M
3300005332\|Ga0066388_104930665	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300005332\|Ga0066388_105138206	All Organisms → cellular organisms → Bacteria → Proteobacteria	664	Open in IMG/M
3300005332\|Ga0066388_107866645	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005343\|Ga0070687_101120916	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005356\|Ga0070674_101851474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300005365\|Ga0070688_101816221	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005459\|Ga0068867_100116688	All Organisms → cellular organisms → Bacteria	2058	Open in IMG/M
3300005468\|Ga0070707_100299697	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300005531\|Ga0070738_10108568	All Organisms → cellular organisms → Bacteria → Acidobacteria	1455	Open in IMG/M
3300005534\|Ga0070735_10008147	All Organisms → cellular organisms → Bacteria	8282	Open in IMG/M
3300005537\|Ga0070730_10140813	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300005542\|Ga0070732_10207186	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300005548\|Ga0070665_100001094	All Organisms → cellular organisms → Bacteria	33493	Open in IMG/M
3300005607\|Ga0070740_10060871	All Organisms → cellular organisms → Bacteria → Acidobacteria	1848	Open in IMG/M
3300005617\|Ga0068859_102890198	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300005713\|Ga0066905_102005703	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300005718\|Ga0068866_10584011	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300005764\|Ga0066903_100037669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5632	Open in IMG/M
3300005764\|Ga0066903_100168616	All Organisms → cellular organisms → Bacteria	3196	Open in IMG/M
3300005764\|Ga0066903_101223636	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300005764\|Ga0066903_102117799	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300005764\|Ga0066903_106101897	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300005841\|Ga0068863_100706490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300005842\|Ga0068858_100051650	All Organisms → cellular organisms → Bacteria	3803	Open in IMG/M
3300005843\|Ga0068860_100208165	All Organisms → cellular organisms → Bacteria → Acidobacteria	1897	Open in IMG/M
3300005937\|Ga0081455_10419776	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300006175\|Ga0070712_100122917	All Organisms → cellular organisms → Bacteria	1956	Open in IMG/M
3300006237\|Ga0097621_100003973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	10246	Open in IMG/M
3300006755\|Ga0079222_10254007	Not Available	1108	Open in IMG/M
3300006852\|Ga0075433_10713410	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300006854\|Ga0075425_100332421	All Organisms → cellular organisms → Bacteria	1750	Open in IMG/M
3300006854\|Ga0075425_101022367	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300006871\|Ga0075434_100064156	All Organisms → cellular organisms → Bacteria	3657	Open in IMG/M
3300006904\|Ga0075424_101131273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300006914\|Ga0075436_101488651	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300007076\|Ga0075435_100187487	All Organisms → cellular organisms → Bacteria	1750	Open in IMG/M
3300009162\|Ga0075423_10740524	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300010046\|Ga0126384_10550827	All Organisms → cellular organisms → Bacteria → Acidobacteria	1002	Open in IMG/M
3300010047\|Ga0126382_10454494	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300010048\|Ga0126373_10117358	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2484	Open in IMG/M
3300010048\|Ga0126373_12996219	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300010359\|Ga0126376_10219997	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300010361\|Ga0126378_12613714	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300010362\|Ga0126377_11706943	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300010366\|Ga0126379_11682093	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300012948\|Ga0126375_11715736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300012971\|Ga0126369_10013818	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6304	Open in IMG/M
3300012971\|Ga0126369_10427731	All Organisms → cellular organisms → Bacteria → Acidobacteria	1368	Open in IMG/M
3300012971\|Ga0126369_10936777	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300012971\|Ga0126369_11659005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300013297\|Ga0157378_10086123	All Organisms → cellular organisms → Bacteria → Acidobacteria	2848	Open in IMG/M
3300013308\|Ga0157375_11419286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300015371\|Ga0132258_10023616	All Organisms → cellular organisms → Bacteria	13509	Open in IMG/M
3300015374\|Ga0132255_100278191	All Organisms → cellular organisms → Bacteria → Acidobacteria	2401	Open in IMG/M
3300016445\|Ga0182038_11957544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300017927\|Ga0187824_10033310	All Organisms → cellular organisms → Bacteria	1556	Open in IMG/M
3300021560\|Ga0126371_10554734	All Organisms → cellular organisms → Bacteria → Proteobacteria	1298	Open in IMG/M
3300021560\|Ga0126371_11827425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300025899\|Ga0207642_10626166	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300025918\|Ga0207662_10559328	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300025938\|Ga0207704_10988537	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300025938\|Ga0207704_11064274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300025941\|Ga0207711_11308881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300026088\|Ga0207641_10008737	All Organisms → cellular organisms → Bacteria	8369	Open in IMG/M
3300026089\|Ga0207648_11792591	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300027706\|Ga0209581_1000810	All Organisms → cellular organisms → Bacteria → Acidobacteria	47026	Open in IMG/M
3300027706\|Ga0209581_1186776	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300027857\|Ga0209166_10469934	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300027874\|Ga0209465_10007290	All Organisms → cellular organisms → Bacteria	4865	Open in IMG/M
3300028379\|Ga0268266_10001110	All Organisms → cellular organisms → Bacteria → Acidobacteria	33674	Open in IMG/M
3300028381\|Ga0268264_10182526	All Organisms → cellular organisms → Bacteria → Acidobacteria	1907	Open in IMG/M
3300031545\|Ga0318541_10780372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300031546\|Ga0318538_10474261	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300031564\|Ga0318573_10506602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300031564\|Ga0318573_10597431	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300031573\|Ga0310915_10446362	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300031715\|Ga0307476_11317422	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300031720\|Ga0307469_10113900	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300031744\|Ga0306918_10641025	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300031747\|Ga0318502_10566080	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300031753\|Ga0307477_10703002	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300031763\|Ga0318537_10388086	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300031764\|Ga0318535_10478392	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300031820\|Ga0307473_10088666	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300031821\|Ga0318567_10685907	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300031879\|Ga0306919_10993367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300031910\|Ga0306923_10311626	All Organisms → cellular organisms → Bacteria → Acidobacteria	1798	Open in IMG/M
3300031912\|Ga0306921_10021095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7152	Open in IMG/M
3300031947\|Ga0310909_11033569	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300032008\|Ga0318562_10403468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300032066\|Ga0318514_10665742	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300032076\|Ga0306924_10715744	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300032091\|Ga0318577_10208393	All Organisms → cellular organisms → Bacteria → Acidobacteria	935	Open in IMG/M
3300032205\|Ga0307472_102785094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.82%
Host-Associated	Host-Associated	28.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.91%
Plants	Host-Associated → Plants	28.18%
Aquatic	Environmental → Aquatic	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.73%
Freshwater	Environmental → Aquatic → Freshwater	0.91%
Roots	Host-Associated → Plants → Roots	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.82%
Loam	Environmental → Terrestrial → Soil → Loam	19.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.91%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.91%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.91%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.82%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.27%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.73%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03825290	2088090014	Soil	MDLNAEANGSDRRCQGVSPADEPCNLSATVHCVKCGQWFCDVHAEDDQWHSCMLVEGEEGGEA
SwBSRL2_0283.00001640	2162886013	Switchgrass Rhizosphere	MNLVEQENGPDRQCQGVSPTDEPCNLPATVHCVKCDQWFCDVHAEDDKWHACMLVEGEEGGEA
INPhiseqgaiiFebDRAFT_1014981902	3300000364	Soil	METKDQKEALDRVCQGVSPTDEPCNLPATVHCVQCSQWFCDVHAEDDQWHSCMLVEGEEGGEA*
INPhiseqgaiiFebDRAFT_1014995482	3300000364	Soil	MKLNEETNGVERMCQGVSPADEPCNLSATVHCVKCGQWFCDVHAEDDQWHSCMLVEGEEGGEA
F14TC_1005076722	3300000559	Soil	MNLNEEANGSDRMCQGVSPAHEPCNLSATVHCVKCGQWFCDVHAEDDQWHSCMLVEGEEGGEA*
AP72_2010_repI_A10DRAFT_10217832	3300000651	Forest Soil	MNLAEQEIGSDRICQGVSPTDEPCNLAATVHCAKCDQWFCDVHAEDEQWHPCMLAEGDEGGEA*
F14TB_1025102991	3300001431	Soil	MDPAEQESPSERICQGVSPVDEPCNLPATVHCVKCDQWFCDAHAEDDQWHACMLDEGEEGGEA*
Ga0062593_1000003344	3300004114	Soil	MNLDEQENGLDRQCQGVSPTDEPCNLPATVHCVKCDQWFCDIHAEDDQWHACMLVEGEEGGES*
Ga0062595_1000565532	3300004479	Soil	MNLEEQETSSDRNCQGVSPTDEPCNIAATVHCAKCDQWFCDAHAEDDQWHSCMLAEGEEGGEA*
Ga0062595_1002463112	3300004479	Soil	MELDEERNEPERKCQGVSPADEPCNLQATVHCVQCGQWFCDAHAEDDQWHPCMLVEGEEGGEA*
Ga0062595_1002850862	3300004479	Soil	MNLVEQENGPDRQCQGVSPTDEPCNLPATVHCVKCDQWFCDVHAEDDKWHACMLVEGEEGGEA*
Ga0066395_100049773	3300004633	Tropical Forest Soil	MNLNEQETGSDRMCQGVSPTDEPCNLAATVHCAKCDQWFCDVHAEDDQWHPCMLVEGEEGGEA*
Ga0065715_102450082	3300005293	Miscanthus Rhizosphere	MELDEEKYAPDRICQGVSPADEPCNLQATVHCVQCGQWFCDAHAEDAQWHPCALVEGEEGGEA*
Ga0066388_1001648172	3300005332	Tropical Forest Soil	MNLDEQETGSDRQCQGVSPRDEPCNLPATVHCVKCDQWFCDVHAEDDQWHACMLVEGDEGGEA*
Ga0066388_1002176733	3300005332	Tropical Forest Soil	MNLDEQENGSDRQCQGVSPSDEPCNLSATVHCVKCDQWFCDVHAEDDQWHACMLVEGEEGGEA*
Ga0066388_1002730031	3300005332	Tropical Forest Soil	MNFDEQETGADRICQGVSPTEEPCNLAATVHCAKCDQWFCDVHAEDDQWHSCMLAEGDEGGEA*
Ga0066388_1049306651	3300005332	Tropical Forest Soil	MNLAEQEIGSDRICQGVSPTDEPCNLAGTVHCAKCDQWFCDVHAEDEQWHPCMLAEGDEGGEA*
Ga0066388_1051382062	3300005332	Tropical Forest Soil	MNLEEQETGSDRICQGVSPTDEPCNLAATVHCAKCDQWFCDIHAEDDQWHSCMLAEGDEGGEA*
Ga0066388_1078666451	3300005332	Tropical Forest Soil	GSLAMNLAEQEIGSDRICQGVSPTDEPCNLAGTVHCAKCNLWFCDVHAEDEQWHPCMLAEGDEGGEA*
Ga0070687_1011209162	3300005343	Switchgrass Rhizosphere	MNLDEQENGSDRQCQGVSPADEPCNLPATVHCVKCDQWFCDVHAEDDKWHACMLVEGEEGGEA*
Ga0070674_1018514742	3300005356	Miscanthus Rhizosphere	MNLDEQENGLDRQCQGVSPTDEPCNLPATVHCVKCDQWFCDVHAEDDQWHACMLVEGEEG
Ga0070688_1018162211	3300005365	Switchgrass Rhizosphere	KYAPDRICQGVSPADEPCNLQATVHCVQCGQWFCDAHAEDAQWHPCALVEGEEGGEA*
Ga0068867_1001166882	3300005459	Miscanthus Rhizosphere	DRQCQGVSPTDEPCNLPATVHCVKCDQWFCDVHAEDDQWHACMLVEGEEGGEA*
Ga0070707_1002996972	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MELDEEKYAPDRICQGVSPADEPCNLQATVHCVQCGQWFCDAHAEDDQWHPCMLVEGEEGGEA*
Ga0070738_101085682	3300005531	Surface Soil	MLREPEPREQSDRACQGNPHGELPCNLSATVHCVRCDLWFCDVHAEDEVWHACMTAQNDEGGEA*
Ga0070735_100081474	3300005534	Surface Soil	MLREPEPREPSDRACQGNPHGELPCNLSATVHCVLCDLWFCDVHAEDEVWHACMTAQNDEGGEA*
Ga0070730_101408132	3300005537	Surface Soil	MLDTNDHETASDRACQGVSPTDEPCNLSATVHCVQCDLWFCDIHAEDDQWHSCILVEGEEGGEA*
Ga0070732_102071862	3300005542	Surface Soil	MLDTNDHETASDRACQGISPTDEPCNLSATVHCVQCDLWFCDIHAEDDQWHSCILVEGEEGGEA*
Ga0070665_10000109431	3300005548	Switchgrass Rhizosphere	MNLDEQENGLDRQCQGVSPTDEACNLPATVHCVKCDQWFCDVHAEDDQWHACMLVEGEEGGES*
Ga0070740_100608712	3300005607	Surface Soil	MLREPEPREASDRACQGNSHGELPCNLSATVHCVLCDLWFCDVHAEDEVWHACMMAQNDEGGEA*
Ga0068859_1028901982	3300005617	Switchgrass Rhizosphere	MNLDEQENGPDRQCQGVSPADEPCNLPATVHCVKCDQWFCDVHAEDDKWHACMLVEGEEGGEA*
Ga0066905_1020057031	3300005713	Tropical Forest Soil	MNLNEQETGSDRMCQGVSPTDEPCNLTATVHCAKCDQWFCDVHAEDDQWHPCMLVEGEEGGEA*
Ga0068866_105840112	3300005718	Miscanthus Rhizosphere	DRQCQGVSPADEPCNLPATVHCVKCDKWFCDVHAEDDKWHACMLVEGEEGGEA*
Ga0066903_1000376697	3300005764	Tropical Forest Soil	MNLEEQQTGSDRICQGVSPTDEPCNLAATVHCAKCDQWFCDIHAEDDQWHSCMLAEGDEGGEA*
Ga0066903_1001686162	3300005764	Tropical Forest Soil	MNLDERDNGSDRQCQGVSPTDEPCQLPATVHCVTCDLWFCDVHAEDDQWHACMLAEGEQGGEA*
Ga0066903_1012236362	3300005764	Tropical Forest Soil	MNLAEQEIGSDRICQGVSPTDEPCNLAATVHCAKCDLWFCDVHAEDEQWHPCMLAEGDEGGEA*
Ga0066903_1021177992	3300005764	Tropical Forest Soil	MLGTNDHENESDRLCQGVSPSDEPCNLPATVHCGQCDLWFCDVHAEDDQWHACMLLEGDVGGEA*
Ga0066903_1061018971	3300005764	Tropical Forest Soil	SLAMNFDEQETGADRICQGVSPTEEPCNLAATVHCAKCDQWFCDVHAEDDQWHSCMLAEGDEGGEA*
Ga0068863_1007064902	3300005841	Switchgrass Rhizosphere	MNLDEQETGLDRQCQGVSPTDEACNLPATVHCVKCDQWFCDVHAEDDQWHACMLVEGEEGGES*
Ga0068858_1000516504	3300005842	Switchgrass Rhizosphere	MELDKEKNGPDRICQGVSPADEPCNIQAIVHCVQCGQWFCDAHAEDDQWHPCMLVEGEEGGEA*
Ga0068860_1002081652	3300005843	Switchgrass Rhizosphere	MILNEEENGSDRMCQGTSPAGESCNLSATVHCVKCGQWFCDVHAEDDQWHACMLVEGEEGGEA*
Ga0081455_104197762	3300005937	Tabebuia Heterophylla Rhizosphere	MNLDEQETGSDRQCQGVSPTDAPCNLPATVHCGKCDLWFCDVHAEDDQWHACMLVEGEEGGEA*
Ga0070712_1001229171	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DRQCQGVSPADEPCNLPATVHCVKCDQWFCDVHAEDDKWHACMLVEGEEGGEA*
Ga0097621_1000039732	3300006237	Miscanthus Rhizosphere	MELNEEKNGLDRICRGVSPVDEPCNLPATVHCVKCDQWFCDVHAEDEQWHACMLAEGEEGGEA*
Ga0079222_102540072	3300006755	Agricultural Soil	MPSMLGPSEHEEGSDRACQGVSPSNGACNQPATVHCIKCHLWFCDLHAEDEQWHACMLPEGDEGGEG*
Ga0075433_107134102	3300006852	Populus Rhizosphere	MNLEQEIGSDRICQGVSPTDEPCNLAATVHCAKCDQWFCDVHAEDDQWHSCMLAEGEEGGEA*
Ga0075425_1003324212	3300006854	Populus Rhizosphere	MELDEEKNEPDRICQGVSPADEPCNLQATVHCVQCDRWFCDAHAEDDQWHPCMLVEGEEGGEA*
Ga0075425_1010223672	3300006854	Populus Rhizosphere	ELDEENNEPDRMCQGVSPSDEPCNLQASVHCVQCDQWFCDAHAEDDQWHPCMLVEGEEGGEA*
Ga0075434_1000641562	3300006871	Populus Rhizosphere	MELDEENNEPDRMCQGVSPSDEPCNLQASVHCVQCDQWFCDAHAEDDQWHPCMLVEGEEGGEA*
Ga0075424_1011312732	3300006904	Populus Rhizosphere	MNLEEQETSSDRICQGVSPTDEPCNIAATVHCAKCDQWFCDAHAEDDQWHSCMLAEGEEG
Ga0075436_1014886511	3300006914	Populus Rhizosphere	MELDEEKNEPDRICQGVSPADAPCNLQATVHCVQCDQWFCDVHAEDDQWHACMLVEGEEGGEA*
Ga0075435_1001874872	3300007076	Populus Rhizosphere	MELDEEKYAPDRICRGVSPADEPCNLQATVHCVQCGQWFCDAHAEDAQWHPCALVEGEEGGEA*
Ga0075423_107405241	3300009162	Populus Rhizosphere	EEKYAPDRICRGVSPADEPCNLQATVHCVQCGQWFCDAHAEDAQWHPCALVEGEEGGEA*
Ga0126384_105508272	3300010046	Tropical Forest Soil	MNLDEQEKASDRQCQGVSPTDEPCNLPATVHCVKCDQWFCDVHAEDDQWHACMLVEGDEGGEA*
Ga0126382_104544942	3300010047	Tropical Forest Soil	MKLDEQENGSDRLCQGVSPTDEPCNLAATVHCVKCDQWFCDVHAEDDQWHACMLAEGEEGGEA*
Ga0126373_101173582	3300010048	Tropical Forest Soil	MPEAIHEEPEDRNCQGVSPADEPCNLPATVHCTKCDQWFCDAHAEDDQWHACMLAEGDEGGEA*
Ga0126373_129962192	3300010048	Tropical Forest Soil	MNLEEQDSGSDRQCQGVSPKDEPCNLPATVHCVKCDQWFCDIHAEDDQWHACMLVEGEEGGEA*
Ga0126376_102199972	3300010359	Tropical Forest Soil	ARAVVESPHQAAESLAMNLEEQETGSDRICQGVSPTDEPCNLAATVHCAKCDQWFCDIHAEDDQWHSCMLAEGDEGGEA*
Ga0126378_126137142	3300010361	Tropical Forest Soil	ADRACQGVSPTDEPCNLPATVHCARCDLWFCDAHAEDDLWHPCMLPEGEEGGEA*
Ga0126377_117069431	3300010362	Tropical Forest Soil	DEQDSGSDRQCQGVSPTDEPCNLPATVHCVKCDQWFCDVHAEDDQWHACMLIEGEEGGEA
Ga0126379_116820932	3300010366	Tropical Forest Soil	MNLNEQETGSDRICQGVSPTDEPCNLAATVHCAKCDQWFCDVHAEDDQWHACMLAEGEEGGEA*
Ga0126375_117157362	3300012948	Tropical Forest Soil	MNFDEQETGADRICRGVSPTEEPCNLAATVHCAKCDQWFCDVHAEDDQWHSCMLAEGDEGGEA*
Ga0126369_100138182	3300012971	Tropical Forest Soil	MNRNEQETGSDRMCQGVSPTDEPCNLAATVHCAKCDQWFCDVHAEDDQWHPCMLVEGEEGGEA*
Ga0126369_104277312	3300012971	Tropical Forest Soil	MNFEEQETGSDRICQGVSPTEEPCNLAATVHCAKCDLWFCDVHAEDDQWHCCMLAEGDEGGEA*
Ga0126369_109367771	3300012971	Tropical Forest Soil	AAESLAMNFDEQETGADRICQGVSPTEEPCNLAATVHCAKCDQWFCDVHAEDDQWHSCMLAEGDEGGEA*
Ga0126369_116590052	3300012971	Tropical Forest Soil	MNFDEQETGSDRICQGVSPTEEPCNFAATVHCAKCDQWFCDEHAEDDQWHSCMLAEGDEGGEA*
Ga0157378_100861234	3300013297	Miscanthus Rhizosphere	MNLDEQENGSDRQCQGVSPADEPCNLPATVHCVKCDQWFCDVHAEDDQWHACMLVEGEEGGES*
Ga0157375_114192862	3300013308	Miscanthus Rhizosphere	MNLDEQENGSDRQCQGVSPTDEPCNLPATVHCVKCDQWFCDVHAEDDKWHACMLVEGEEGGEA*
Ga0132258_100236163	3300015371	Arabidopsis Rhizosphere	MNLDEQENGLDRQCQGVSPTDEPCNLPATVHCVKCDQWFCDVHAEDDQWHACMLVEGEEGGES*
Ga0132255_1002781913	3300015374	Arabidopsis Rhizosphere	MELDEEKYAPDRICQGVSPADEPCNLQATVHCVQCGQWFCDAHAEDAQWHPCMLVEGEEGGEA*
Ga0182038_119575442	3300016445	Soil	MLGTNDHETASDRLCQGVSPSDEPCNLPATVHCGQCDLWFCDVHAEDEQWHTCMLLEGDEGGE
Ga0187824_100333102	3300017927	Freshwater Sediment	MLDTNDHETASDRACQGVSPTDEPCNLSATVHCVQCDLWFCDIHAEDDQWHSCILVEGEEGGEA
Ga0126371_105547342	3300021560	Tropical Forest Soil	MNLEEQQTGSDRICQGVSPTDEPCNLAATVHCAKCDQWFCDIHAEDDQWHSCMLAEGDEGGEA
Ga0126371_118274252	3300021560	Tropical Forest Soil	MNLDERENGSDRLCQGVSPTDEPCQLPATVHCVTCDLWFCDVHAEDDQWHACMLAEGEQGGEA
Ga0207642_106261662	3300025899	Miscanthus Rhizosphere	EQENGSDRQCQGVSPADEPCNLPATVHCVKCDKWFCDVHAEDDKWHACMLVEGEEGGEA
Ga0207662_105593282	3300025918	Switchgrass Rhizosphere	MNLDEQENGSDRQCQGVSPADEPCNLPATVHCVKCDQWFCDVHAEDDKWHACMLVEGEEGGEA
Ga0207704_109885372	3300025938	Miscanthus Rhizosphere	LDRQCQGVSPTDEPCNLPATVHCVKCDQWFCDVHAEDDQWHACMLVEGEEGGES
Ga0207704_110642742	3300025938	Miscanthus Rhizosphere	MNLDEQENGSDRQCQGVSPADEPCNLPATVHCVKCDQWFCDVHAEDDQWHACMLVEGEEGGES
Ga0207711_113088811	3300025941	Switchgrass Rhizosphere	MELDEEKYAPDRICQGVSPADEPCNLQATVHCVQCGQWFCDAHAEDAQWHPCALVEGE
Ga0207641_100087379	3300026088	Switchgrass Rhizosphere	MELDEEKYAPDRICQGVSPADEPCNLQATVHCVQCGQWFCDAHAEDAQWHPCALVEGEEGGEA
Ga0207648_117925911	3300026089	Miscanthus Rhizosphere	MNLDEQENGSDRQCQGVSPADEPCNLPATVHCVKCDQWFCDVHAEDDQWHACMLVEGEE
Ga0209581_100081010	3300027706	Surface Soil	MLREPEPREPSDRACQGNPHGELPCNLSATVHCVLCDLWFCDVHAEDEVWHACMTAQNDEGGEA
Ga0209581_11867761	3300027706	Surface Soil	MLREPEPREASDRACQGNSHGELPCNLSATVHCVLCDLWFCDVHAEDEVWHACMMAQNDEGGEA
Ga0209166_104699342	3300027857	Surface Soil	MLDNNDHETASDRACQGVSPTDEPCNLPATVHCGQCDLWFCDIHAEDDQWHACILAQGEEGGEA
Ga0209465_100072903	3300027874	Tropical Forest Soil	MNLNEQETGSDRMCQGVSPTDEPCNLAATVHCAKCDQWFCDVHAEDDQWHPCMLVEGEEGGEA
Ga0268266_1000111030	3300028379	Switchgrass Rhizosphere	MNLDEQENGLDRQCQGVSPTDEACNLPATVHCVKCDQWFCDVHAEDDQWHACMLVEGEEGGES
Ga0268264_101825262	3300028381	Switchgrass Rhizosphere	MILNEEENGSDRMCQGTSPAGESCNLSATVHCVKCGQWFCDVHAEDDQWHACMLVEGEEGGEA
Ga0318541_107803721	3300031545	Soil	MNLEEQETGSDRICQGVSPTDEPCNLAATVHCAKCDQWFCDIHAEDDQWHSC
Ga0318538_104742611	3300031546	Soil	MLGTNDEETGSDRLCQGVSPTHQSCNLPATVHCGRCDLWFCDVHAEDDQWHACMLLEGDEGGEG
Ga0318573_105066022	3300031564	Soil	MNLEEQETGSDRICQGVSPTDEPCNLAATVHCAKCDQWFCDIHAEDDQWHSCMLAEGDEGGEA
Ga0318573_105974311	3300031564	Soil	MLGMNDQEAGSDRRCQGVSPADEPCNLPATVHCVQCDLWFCDVHAEDDQWHACMLVEGDEGGEA
Ga0310915_104463622	3300031573	Soil	RLCQGVSPTHQSCNLPATVHCGRCDLWFCDVHAEDDQWHACMLLEGDEGGEG
Ga0307476_113174222	3300031715	Hardwood Forest Soil	DRACQGVSPTDEPCNLPATVHCVQCDLWFCDIHAEDDQWHACILVEGEEGGEA
Ga0307469_101139002	3300031720	Hardwood Forest Soil	MNLVEQENGSDRQCQGVSPTDEPCNLPATVHCVKCDQWFCDVHAEDDKWHACMLVEGEEGGEA
Ga0306918_106410251	3300031744	Soil	EETGSDRLCQGVSPTHQSCNLPATVHCGRCDLWFCDVHAEDDQWHACMLLEGDEGGEG
Ga0318502_105660801	3300031747	Soil	VESRQRSVSRLRRRMLGTNDDQETGSDRLCQGVSPADEPCNLPATVHCVQCDLWFCDIHAEDDQWHACMLVEGEEGGEA
Ga0307477_107030022	3300031753	Hardwood Forest Soil	MLDNNDHETASDRACQGVSPTDEPCNLPATVHCVQCDLWFCDIHAEDDQWHACILVEGEEGGEA
Ga0318537_103880862	3300031763	Soil	VVESPRQAAESLAMNLEEQETGSDRICQGVSPTDEPCNLAATVHCAKCDQWFCDIHAEDDQWHSCMLAEGDEGGEA
Ga0318535_104783921	3300031764	Soil	HCSARAVVESPRQAAESLAMNLEEQETGSDRICQGVSPTDEPCNLAATVHCAKCDQWFCDIHAEDDQWHSCMLAEGDEGGEA
Ga0307473_100886662	3300031820	Hardwood Forest Soil	MNLDEQENGLDRQCQGVSPTDEPCNLPATVHCVKCDQWFCDVHAEDDKWHACMLVEGEEGGEA
Ga0318567_106859071	3300031821	Soil	WFLRCSARAVVESPRQAAESLAMNLEEQETGSDRICQGVSPTDEPCNLAATVHCAKCDQWFCDIHAEDDQWHSCMLAEGDEGGEA
Ga0306919_109933671	3300031879	Soil	MLGTNDDQETGSDRLCQGVSPADEPCNLPATVHCVQCDLWFCDIHAEDDQWHACMLVEGEEGGEA
Ga0306923_103116261	3300031910	Soil	MLGTNDHETASDRLCQGVSPSDEPCNLPATVHCGQCDLWFCDVHAEDEQWHTCMLLEGDEGGEA
Ga0306921_100210955	3300031912	Soil	MEELEGQRDDHRSCQGVSSQDESCDYPATVHCSQCGKWFCDAHAEDDGWHSCMLQPGEEGGEA
Ga0310909_110335692	3300031947	Soil	DQEAGSDRRCQGVSPADEPCNLPATVHCVQCDLWFCDVHAEDDQWHACMLVEGDEGGEA
Ga0318562_104034682	3300032008	Soil	MLGTNDEETGSDRLCQGVSPTRESCNLPATVHCGRCDLWFCDVHAEDDQWHACMLLEGDEGGEG
Ga0318514_106657421	3300032066	Soil	MLGTNDEETGSDRLCQGVSPTHQSCNLPATVHCGRCDLWFCDVHAEDDQWHACMLPEGDEGGEG
Ga0306924_107157442	3300032076	Soil	MLGTNDEETGSDRLCQGVSPTRESCNLPATVHCGRCDLWFCDVHAEDDQWHACMLPEGDEGGEG
Ga0318577_102083931	3300032091	Soil	MNLEEQETGSDRICQGVSPTDEPCNLAATVHCAKCDQWFCDIHAEDDQWHSCMLAEGDEG
Ga0307472_1027850941	3300032205	Hardwood Forest Soil	MNLVEQENGSDRQCQGVSPADEPCNLPATVHCVKCDQWFCDVHAEDDKWHACMLVEG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087583

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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