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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F087643 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 110 |
| Average Sequence Length | 53 residues |
| Representative Sequence | ATTQVHQGDALVIDHHLGEEGLVFLRDTENRSSDLPLPNSGQLMTAEARV |
| Number of Associated Samples | 96 |
| Number of Associated Scaffolds | 110 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 1.83 % |
| % of genes near scaffold ends (potentially truncated) | 96.36 % |
| % of genes from short scaffolds (< 2000 bps) | 89.09 % |
| Associated GOLD sequencing projects | 90 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.32 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (50.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.273 % of family members) |
| Environment Ontology (ENVO) | Unclassified (30.909 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (40.909 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 6.41% β-sheet: 30.77% Coil/Unstructured: 62.82% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.32 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 110 Family Scaffolds |
|---|---|---|
| PF00158 | Sigma54_activat | 90.91 |
| PF02954 | HTH_8 | 1.82 |
| PF07724 | AAA_2 | 0.91 |
| PF02321 | OEP | 0.91 |
| PF13667 | ThiC-associated | 0.91 |
| PF01208 | URO-D | 0.91 |
| PF08281 | Sigma70_r4_2 | 0.91 |
| COG ID | Name | Functional Category | % Frequency in 110 Family Scaffolds |
|---|---|---|---|
| COG1538 | Outer membrane protein TolC | Cell wall/membrane/envelope biogenesis [M] | 1.82 |
| COG0407 | Uroporphyrinogen-III decarboxylase HemE | Coenzyme transport and metabolism [H] | 0.91 |
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| Name | Rank | Taxonomy | Distribution |
| All Organisms | root | All Organisms | 50.00 % |
| Unclassified | root | N/A | 50.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 27.27% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 27.27% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 7.27% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 7.27% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 6.36% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.64% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 3.64% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 2.73% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 1.82% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 1.82% |
| Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 0.91% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 0.91% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.91% |
| Palsa | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa | 0.91% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 0.91% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.91% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.91% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.91% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.91% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.91% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.91% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.91% |
| Visualization |
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| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300002914 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm | Environmental | Open in IMG/M |
| 3300002917 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm | Environmental | Open in IMG/M |
| 3300004092 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
| 3300005187 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 | Environmental | Open in IMG/M |
| 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
| 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
| 3300005447 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 | Environmental | Open in IMG/M |
| 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
| 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
| 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
| 3300005555 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 | Environmental | Open in IMG/M |
| 3300005921 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 | Environmental | Open in IMG/M |
| 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
| 3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
| 3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
| 3300011270 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG | Environmental | Open in IMG/M |
| 3300011271 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG | Environmental | Open in IMG/M |
| 3300012189 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG | Environmental | Open in IMG/M |
| 3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
| 3300012207 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG | Environmental | Open in IMG/M |
| 3300012210 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG | Environmental | Open in IMG/M |
| 3300012211 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG | Environmental | Open in IMG/M |
| 3300012351 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG | Environmental | Open in IMG/M |
| 3300012356 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG | Environmental | Open in IMG/M |
| 3300012683 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG | Environmental | Open in IMG/M |
| 3300012685 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG | Environmental | Open in IMG/M |
| 3300012917 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG | Environmental | Open in IMG/M |
| 3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
| 3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
| 3300012944 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300014489 | Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG | Environmental | Open in IMG/M |
| 3300015052 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300015054 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300016270 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 | Environmental | Open in IMG/M |
| 3300016319 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H | Environmental | Open in IMG/M |
| 3300016341 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 | Environmental | Open in IMG/M |
| 3300017955 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2 | Environmental | Open in IMG/M |
| 3300019789 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
| 3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
| 3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
| 3300021170 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M | Environmental | Open in IMG/M |
| 3300021181 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O | Environmental | Open in IMG/M |
| 3300021403 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O | Environmental | Open in IMG/M |
| 3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
| 3300021407 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O | Environmental | Open in IMG/M |
| 3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
| 3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
| 3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
| 3300024288 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal | Environmental | Open in IMG/M |
| 3300024330 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026309 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes) | Environmental | Open in IMG/M |
| 3300026345 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-A | Environmental | Open in IMG/M |
| 3300026358 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B | Environmental | Open in IMG/M |
| 3300026467 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A | Environmental | Open in IMG/M |
| 3300026551 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes) | Environmental | Open in IMG/M |
| 3300026557 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal | Environmental | Open in IMG/M |
| 3300027174 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes) | Environmental | Open in IMG/M |
| 3300027432 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027629 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027875 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027908 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027910 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes) | Environmental | Open in IMG/M |
| 3300027915 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes) | Environmental | Open in IMG/M |
| 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300030967 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031128 | Oak Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031564 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21 | Environmental | Open in IMG/M |
| 3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
| 3300031736 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21 | Environmental | Open in IMG/M |
| 3300031748 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22 | Environmental | Open in IMG/M |
| 3300031754 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 | Environmental | Open in IMG/M |
| 3300031805 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23 | Environmental | Open in IMG/M |
| 3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
| 3300031823 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 | Environmental | Open in IMG/M |
| 3300031833 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178 | Environmental | Open in IMG/M |
| 3300031880 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25 | Environmental | Open in IMG/M |
| 3300031890 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2) | Environmental | Open in IMG/M |
| 3300031893 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28 | Environmental | Open in IMG/M |
| 3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
| 3300031941 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080 | Environmental | Open in IMG/M |
| 3300031942 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176 | Environmental | Open in IMG/M |
| 3300031954 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2) | Environmental | Open in IMG/M |
| 3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
| 3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
| 3300032039 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21 | Environmental | Open in IMG/M |
| 3300033289 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108 | Environmental | Open in IMG/M |
| 3300033290 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI25617J43924_100015628 | 3300002914 | Grasslands Soil | LKRAIERNVVCPLSRLLATGQLHQXDXXLIDWHRGEEGLVFLRDTEKRSSSAKIDFPVPNSGQLITAEVRV* |
| JGI25616J43925_103337092 | 3300002917 | Grasslands Soil | RAIERCLVYPIARLLATAQVHQGDVLIIDRHPREESLLFVRDTGKLSSSPNIDFLPNTGQLMTAEVPA* |
| Ga0062389_1024521222 | 3300004092 | Bog Forest Soil | SRLLATGQLHQGDSLLIDRQHGDEGLIFLRDTEKRSSGSKIDFPILGSGPLMTAEARV* |
| Ga0066675_104907841 | 3300005187 | Soil | ALVIDHHLGEQGLVFLRDMENRSADPKIDFRLANSGQLMAAEARV* |
| Ga0065715_109608232 | 3300005293 | Miscanthus Rhizosphere | RYVVYPIAKLLATAQVHQGDALLIDRHRGEEGLVFLRDPEERPSGSKIDFPIQGSGQLMTAEARV* |
| Ga0068868_1022091512 | 3300005338 | Miscanthus Rhizosphere | VVYPIAKLLATAQVHQGDALLIDRHRGEEGLVFLRDPEERPSGSKIDFPIQGSGQLMTAEARV* |
| Ga0066689_100831813 | 3300005447 | Soil | GDALVIDHHLGEEGLVFLRDKENRSSDLPLPNSGQLMTAEARV* |
| Ga0070707_1008995461 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | ATGQLHQGDLVLIGRQHGDEGLVFVRDTEKRSSGSKIDFPIQGSGQLMSADARV* |
| Ga0070699_1003464511 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | LLATAQVHQGDALVIDRHRGGEGLVFLRDPEKRPSGSKIDFPIQGSGQLMTAEARI* |
| Ga0070697_1002146141 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | VIDHHLGEEGLVFLRDTENRSSDLPLPNSGQLMTAEARV* |
| Ga0066692_102041041 | 3300005555 | Soil | EQGLVFLRDAENRSADPKVDFCLANSGQLMAAEARV* |
| Ga0070766_106921152 | 3300005921 | Soil | LSRLLATGQLQQGDVLLIDWQRGEEGLVFLRDTEKPSSSARIGFPVPGSEQLMTAEVRV* |
| Ga0070716_1007591531 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | RAIERYVVYPIARLLATAQVYQGDVLVIDRHPREEGLLFLRDTEARSSGTSLELLSNSGRLMTAEVPA* |
| Ga0070716_1016214182 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | VYPIAKLLATAQVHQGDALLIDRHRGEEGLVFLRDPEERPSSSKIDFPFQGSGQLMTSEARI* |
| Ga0099830_116059011 | 3300009088 | Vadose Zone Soil | AIERYVVYPIARLLATTQVHQGDALVIDHHFGEEGLVFLRDTENRSSDLPLPNSGQLMTAEARV* |
| Ga0099828_113196951 | 3300009089 | Vadose Zone Soil | DALVIDHHLGEEGLVFLRDTENRSSDLPLPNSGQLMTAEARV* |
| Ga0137391_101876553 | 3300011270 | Vadose Zone Soil | AQVHQGDALVIDHHLGEQGLVFLRDTEKRSTSVKIDFPVPSSGQLMTAEVRV* |
| Ga0137391_107034212 | 3300011270 | Vadose Zone Soil | RLLATAQVHQGDALVIDHHLGEQGLVFLRDQENRSSDLPLPNPGQLMTAEARV* |
| Ga0137393_106230012 | 3300011271 | Vadose Zone Soil | HQGDVFLIGWHCCEKGVVFLRDTEKRSSNSKIDFPVPGSGQLMTAEVRV* |
| Ga0137388_113519072 | 3300012189 | Vadose Zone Soil | ASERNVVCALSRRLATGQLHQGDVLLIDWHRGEEGLVVLRDTEKRSSSAKIDFPVPSSGQLMTAEVRV* |
| Ga0137362_103957381 | 3300012205 | Vadose Zone Soil | DALVIDHHLGEEGLVFLRDKENRSSDLPLPNSGQLMTAEARV* |
| Ga0137362_106946792 | 3300012205 | Vadose Zone Soil | ATAQVHQGDALVIDHHLGEQGLVFLRDTENWSADPKIDFRVANSGQLMAAEARV* |
| Ga0137381_102942831 | 3300012207 | Vadose Zone Soil | DHHLGEEGLVFLRDKENRSSDLPLPNSGQLMTAEARV* |
| Ga0137378_108932401 | 3300012210 | Vadose Zone Soil | EQGLVFLRDMENRSADPKIDFRLANSGQLMAAEARV* |
| Ga0137377_103104091 | 3300012211 | Vadose Zone Soil | QGDALVIDHHLGEQGLVFLRDTENRSADAKIDFRLANSGQLMAAEARV* |
| Ga0137377_103348053 | 3300012211 | Vadose Zone Soil | ATAQVHHGDALVIDHHLGEEGLVFLRDKENRSSDLPLPNSGQLMTAEARV* |
| Ga0137386_112318821 | 3300012351 | Vadose Zone Soil | LLATTQVHQGDALVIDHHLGEEGLVFLRDTENRSSDLPLPNSGQLMTAEARV* |
| Ga0137371_102479702 | 3300012356 | Vadose Zone Soil | TQVRQGDALVIDHHLGEEGLVFLRDTENRSSDLPLPNSGQLMTAEARV* |
| Ga0137398_105773202 | 3300012683 | Vadose Zone Soil | ERYVVYPIARLLATTQVHQGDALVIDHHLGEEGLVFLRDTENRSSDLPLPNSGQLMTAEARV* |
| Ga0137397_108429702 | 3300012685 | Vadose Zone Soil | AIERYVVYPIARLLATAQVHQDDVLVIDRHPREEGLLFLRDTETRSSGPSLELLSNSGRMMTAEVPA* |
| Ga0137395_104989412 | 3300012917 | Vadose Zone Soil | LGEEGLVFLRDTENRSSDLPLPNSGQLMTAEARV* |
| Ga0137395_109253961 | 3300012917 | Vadose Zone Soil | VVYPIARLLATAQVHQGDALVIDHYLGEQGLVFLRDTENRSADPKIDFRLANSGQLMAAEARV* |
| Ga0137394_101472085 | 3300012922 | Vadose Zone Soil | VLLIDRHSGEEGLVFLRDTEKRPSGSMINFPIQASGQLMTAEARV* |
| Ga0137359_117631802 | 3300012923 | Vadose Zone Soil | ATAQVHQGDALVIDHHLGEQGLVFLRDTENRSADPKIDFRLANSGQLMAAEARV* |
| Ga0137410_106634952 | 3300012944 | Vadose Zone Soil | VIDHHLGEEGLVFLRDKENRSSDLPLPNSGQLMTAEARV* |
| Ga0126369_122074482 | 3300012971 | Tropical Forest Soil | AQVHQGDALVIDRQRGEEALVFLRDMETRSSGPKIDFPLPDAAQLMTVGARV* |
| Ga0182018_100124377 | 3300014489 | Palsa | VHQGDALVIDHHFGEQGLVFLRDPENLSADPKIDFRLAKSGQLMAAEARV* |
| Ga0137411_10365584 | 3300015052 | Vadose Zone Soil | QLHQGDVLLIDWHRGEEGLVFLRDTEKRSCSAKVDFPVPSSGQLMTAEVRV* |
| Ga0137420_13510641 | 3300015054 | Vadose Zone Soil | DCTSQVHQGDALVIDHHLGEEGLVFLRDKENRSSDLPLPNSGQLMTAEARV* |
| Ga0132256_1003373333 | 3300015372 | Arabidopsis Rhizosphere | RGEEGLVFLRDTEKRSSSSKIDFPIQASGQLMTAEARV* |
| Ga0132257_1017566331 | 3300015373 | Arabidopsis Rhizosphere | AIERYVVYPIAKLLATAQVHQGDSLVIDRLCGEEGLVFLRDTEKRSSSSKIDFPIQASGQLMTAEARV* |
| Ga0182036_109238001 | 3300016270 | Soil | QVRQGDALVIDRQRGEEALVFLRDTEKRSSGPKIDFPLPDPGEVMTVEARV |
| Ga0182036_118771661 | 3300016270 | Soil | PIARLLATAQVHQGDALVIDRQRGEEALVFLRDMEKRSSGPKIDFPLPDAGQRTTVEVRV |
| Ga0182033_121695951 | 3300016319 | Soil | RYIVYPIARLVATAQVRQGDALVIDRQRGEEALVFLRDTEKRSSGPKIAFPLPDPGEVMTVEARV |
| Ga0182035_106229032 | 3300016341 | Soil | IVYPIARLVATAQVRQGDALVIDRQRGEEALVFLRDTEKRSSGPKIAFPLPDPGEVMTVEARV |
| Ga0187817_102739211 | 3300017955 | Freshwater Sediment | QVHQGDALVIDRHLGHEGLVFFRDTEKRSPGSKIDFPLQGSGKLMTVEARV |
| Ga0137408_12799974 | 3300019789 | Vadose Zone Soil | ATTQVHQGDALVIDHHLGEEGLVFLRDTENRSSDLPLPNSGQLMTAEARV |
| Ga0137408_13605482 | 3300019789 | Vadose Zone Soil | DHHLGEQGLVFLRDTENRSADPRIDFRLANSGQLMAAEARV |
| Ga0210403_102935471 | 3300020580 | Soil | RGDLVLIDRQYGDEGLVFLRDTEKRSSGSKIDFPIQGSGQLMTVEARV |
| Ga0210399_100512804 | 3300020581 | Soil | DRHRGEEGLAFLRDTEKRPSGSEMDFPIQGSGLLMPVEV |
| Ga0210406_100556264 | 3300021168 | Soil | HRGDALIIDHHLSEEGLVFLRDTENRSSDLPLPNSGQLMTAEARV |
| Ga0210406_100606964 | 3300021168 | Soil | HHLGEEGLVFLRDTENRFSDLPLPNSGQLMTAEALV |
| Ga0210400_111801331 | 3300021170 | Soil | ARLLATTQLHQGDVLLIDWHRGEEGLVFLRDTEKRSSRAKIDFPVPNSGRLMTAEVRV |
| Ga0210388_106631962 | 3300021181 | Soil | QGDLLLIDRQHGDEGLVFLRDTEKRSSGAKIDFPIQGSGPLMPAEARV |
| Ga0210397_116336242 | 3300021403 | Soil | QLHQGDALVIDHHLGEEGLVFLRDKEDRSSDIPLPNTGQLITAEARV |
| Ga0210387_103974131 | 3300021405 | Soil | HVVYPIARLLATAQVHRGDALIIDHHLSEEGLVFLRDKENRSSDLPLPNSGQLMTAEARV |
| Ga0210387_110818862 | 3300021405 | Soil | RGDALIIDHHLSEEGLVFLRDTENRSFDLPLPNSGQLMTAEARV |
| Ga0210383_101010454 | 3300021407 | Soil | HQGDALVIDHHPGEQELIFSRDAESRPADPKIDFRLANSGQVIASEARV |
| Ga0210402_102551591 | 3300021478 | Soil | HPIAKLVATAQVHQGDALVIDRHRGEEGLAFLRDTEKRPSGSEMDFPIQGSGLLMPVEV |
| Ga0210402_115955432 | 3300021478 | Soil | HQGDLLLIDRQHGDEGLVFLRDIEKRSSGSKIDFPIQGSGQAMTAEARV |
| Ga0210409_110490652 | 3300021559 | Soil | KLLATAQVHQGDALVIDRHRGEEGLVFLRDTEKRSSGSKIDFPVQASGQLMTAEVRV |
| Ga0126371_114152571 | 3300021560 | Tropical Forest Soil | PIARLVATAQVRQGDALVIDRQRGEEALVFLRDTEKRSSGPKIDFPLPDPGEVMTVEARV |
| Ga0179589_100372711 | 3300024288 | Vadose Zone Soil | DHHPGEQGLVFLRDAENRSADPKVDFCLANSGQLMAAEARV |
| Ga0179589_102333501 | 3300024288 | Vadose Zone Soil | IDHHLGEQGLVFLRDTENRSSDLPLPNSGQLMTAEARV |
| Ga0137417_12683172 | 3300024330 | Vadose Zone Soil | RAIERYVVYPIARLLATAQVHHGDALVIDHHLGEEGLVFLRDKENRSSDLPLPNSGQLMTAEARV |
| Ga0207646_112480641 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | RLLATGQLHQGDLVLIGRQHGDEGLVFVRDTEKRSSGSKIDFPIQGSGQLMSADARV |
| Ga0207700_104327191 | 3300025928 | Corn, Switchgrass And Miscanthus Rhizosphere | DVLLIDRQHGDEGLVFLRDTEKRSSGSKIDFPIQGSGQLMTAEARI |
| Ga0207686_100993273 | 3300025934 | Miscanthus Rhizosphere | VYPIARLLATAQVYQGDVLVIDRHPREEGLLFLRDTEARSSGTSLELLSNSGRLMTAEVP |
| Ga0207665_103722751 | 3300025939 | Corn, Switchgrass And Miscanthus Rhizosphere | RAIERYVVYPIARLLATAQVYQGDVLVIDRHPREEGLLFLRDTEARSSGTSLELLSNSGRLMTAEVPA |
| Ga0207711_104025851 | 3300025941 | Switchgrass Rhizosphere | AIERYVVYPIAKLLATAQVHQGDALLIDRHRGEEGLVFLRDPEERPSGSKIDFPIQGSGQLMTAEARV |
| Ga0209055_12019101 | 3300026309 | Soil | AIERYVVYPIARLLATTQVHQGDALVIDHHLGEEGLVFLRDTENRSSDLPLPNSGQLMTAEARV |
| Ga0257148_10053512 | 3300026345 | Soil | IDHHFGEEGLVFLRDTENRSSDLPLPNSGQLMTAEARV |
| Ga0257166_10255302 | 3300026358 | Soil | TAQVHQGDALVIDHHLGEQGLVFSRDTENRSADPKIDFRLANSGQLMAAEARV |
| Ga0257154_10054133 | 3300026467 | Soil | LLASAQVHQGDELVIDHHLGEEGLVFLRDKENRSSDLPLPNSGQLMTAEARV |
| Ga0209648_100131979 | 3300026551 | Grasslands Soil | SRLLATGQLHQGDVLLIDWHRGEEGLVFLRDTEKRSSSAKIDFPVPNSGQLITAEVRV |
| Ga0179587_110378122 | 3300026557 | Vadose Zone Soil | ARLLATVQVRQGDSLVIDHHLGEQGLVFLRDTENRSADRKIDFRLANSGQLMAAEARV |
| Ga0207948_10093001 | 3300027174 | Forest Soil | ERYVVYPIARLLATTQVHQGDALVIDHDLGEEGLVFLRDTENRFSDLPLPNSGHMMTAEVRV |
| Ga0209421_11304321 | 3300027432 | Forest Soil | DALVIDHHLGEEGLVFLRDTENRSADPKIDFRLANSGQLMAAEARV |
| Ga0209422_10397642 | 3300027629 | Forest Soil | PIARLLATAQVHQGDALVIDHHLGEEGLIFLREKEIRSYDLPLPNLGQLMTAEAQV |
| Ga0209283_106017481 | 3300027875 | Vadose Zone Soil | GEEGLVFSRDTEKRSPSAKIDFPVPNSGQLMTAEARV |
| Ga0209006_111749022 | 3300027908 | Forest Soil | QVHQGDALVIDHHLGEEGLVFLRDKENRSSDLPLPNSGQLMVAEARI |
| Ga0209583_100997382 | 3300027910 | Watersheds | LLATTQVHQGDALVIDHHLGKQGLVFLRDTEDRSAEPKIDFRLANAGQLMTAEARV |
| Ga0209069_108671891 | 3300027915 | Watersheds | GDALVIGHHLGEQGLVFLRDTENRSADPKIDFRLANSGQLMAAEARELSCVYSSMD |
| Ga0268264_105996871 | 3300028381 | Switchgrass Rhizosphere | ALLIDRHRGEEGLVFLRDPEERPSGSKIDFPIQGSGQLMTAEARV |
| Ga0075399_112832582 | 3300030967 | Soil | GDALLIDRHRGEEGLVFLRDPEKRPSGSKIDFPIQGSGQLMTAEARV |
| Ga0170823_119869292 | 3300031128 | Forest Soil | ARLLATAQVHQGDALVIDHHLGEEGLVFLRDKENRPSDLPLPNSGQLMTAEVRV |
| Ga0318573_106405992 | 3300031564 | Soil | TGQVQQGDALVIDRQRGEEALVFLKDMEKRSSGPKIDLPLPDAAQLMTVEARVCGVHHHAEASQR |
| Ga0307469_125237632 | 3300031720 | Hardwood Forest Soil | GDALVIDHHLGEEGLVFLRDTENRSADPKIDFRLANSGQLMAAEARV |
| Ga0318501_106001832 | 3300031736 | Soil | VATAQVRQGDALVIDRQRGEEALVFLRDTEKRSSGPKIAFPLPDPGEVMTVEARV |
| Ga0318492_100589722 | 3300031748 | Soil | VYPIARLLATAQVHQGDALVIDHNLGEKGLVFLRDKETRSSDLPVPNSGQLMTAEANA |
| Ga0307475_103718751 | 3300031754 | Hardwood Forest Soil | IERFVVYPIARLLATAQVHQGDVLVIDRHPREEGLLFVRDTGKLSASPNIDFLPNPGQLMTAEVPA |
| Ga0307475_111493162 | 3300031754 | Hardwood Forest Soil | RYVVYPIAKLLATAQVHQGDALVIDRHRGEEGLVFLRDTEKRPSGSKIDFPIQASGQLMTAEARV |
| Ga0318497_107095752 | 3300031805 | Soil | VRQGDALVIDRQRGEEALVFLRDTEKRSSGPKIDFPLPDPGEVMTVEARV |
| Ga0307473_103486512 | 3300031820 | Hardwood Forest Soil | HGDEGLVFLRDTEKRSSGSKIDFPIQGSGQLMTVEARV |
| Ga0307478_117099432 | 3300031823 | Hardwood Forest Soil | AIERYVVYPIAKLLATAQVHQGDALVIDRHRGGEGLVFLRDLEKRPSGSKIDFPIQGSGQLMTAEARV |
| Ga0310917_100849443 | 3300031833 | Soil | AIERYIVYPIARLVATAQVRQGDALVIDRQRGEEALVFLRDTEKRSSGPKIAFPLPDPGEVMTVEARV |
| Ga0318544_101240001 | 3300031880 | Soil | QVHQGDALVIDHNLGEKGLVFLRDKETRSSDLPVPNSGQLMTAEANA |
| Ga0306925_111126972 | 3300031890 | Soil | RQGDALVIDRQRGEEALVFLRDTEKRSSGPKIAFPLPDPGEVMTVEARV |
| Ga0318536_100598351 | 3300031893 | Soil | VHPIARLVATAQVHQGDALVIDRQRGEEALVFLRDTEKRSSGPKIAFPLPDPGEVMTVEARV |
| Ga0318536_101040851 | 3300031893 | Soil | IDHNLGEKGLVFLRDKETRSSDLPVPNSGQLMTAEANA |
| Ga0306921_114226322 | 3300031912 | Soil | IVYPIARLVATAQVRQGDALVIDRQRGEEALVFLRDTEKRSSGPKIDFPLPDPGEVMTVEARV |
| Ga0310912_102569332 | 3300031941 | Soil | LVIDHNLGEKGLVFLRDKETRSSDLPVPNSGQLMTAEANA |
| Ga0310916_108262312 | 3300031942 | Soil | ERYIVYPIARLVATAQVRQGDALVIDRQRGEEALVFLRDTEKRSSGPKIDFPLPDPGEVMTVEARV |
| Ga0306926_120160242 | 3300031954 | Soil | QVRQGDALVIDRPRGEEALVFLRDTEKRSSGPKIDFPLPDPGEVMTVEARV |
| Ga0307479_104751473 | 3300031962 | Hardwood Forest Soil | LKRAIERNVVGALSRLLATGQLHQGDMLLIDRHRGDEGLVFLRDTQKRSFGPKIDFPLPDSGQQMTAVARV |
| Ga0307479_109270471 | 3300031962 | Hardwood Forest Soil | LLIDWHRGEEGLVFLRDTGKRSSSAKIDFPVPSSGQLMTAEVRV |
| Ga0306922_110284211 | 3300032001 | Soil | ERYIVYPIARLVATAQVRQGDALVIDRQRGEEALVFLRDTEKRSSGPKIAFPLPDPGEVMTVEARV |
| Ga0318559_102614252 | 3300032039 | Soil | LVIDRQRGEEALVFLKDMEKRSSGPKIDLPLPDAAQLMTVEARVCGVHHHAEASQR |
| Ga0310914_108324022 | 3300033289 | Soil | RLVATAQVRQGDALVIDRQRGEEALVFLRDTEKRSSGPKIDFPLPDPGEVMTVEARV |
| Ga0318519_101818262 | 3300033290 | Soil | LVATAQVRQGDALVIDRQRGEEALVFLRDTEKRSSGPKIAFPLPDPGEVMTVEARV |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |