Metagenome / Metatranscriptome Family F087653

Basic Information
Family ID	F087653
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	94 residues
Representative Sequence	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTAVWLEP
Number of Associated Samples	102
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	11.93 %
% of genes near scaffold ends (potentially truncated)	99.09 %
% of genes from short scaffolds (< 2000 bps)	93.64 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Unclassified (59.091 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.182 % of family members)
Environment Ontology (ENVO)	Unclassified (25.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.61% β-sheet: 23.53% Coil/Unstructured: 63.87%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF13738	Pyr_redox_3	14.55
PF00743	FMO-like	5.45
PF03976	PPK2	0.91
PF00126	HTH_1	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	5.45
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
All Organisms	root	All Organisms	40.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
cellular organisms	root	All Organisms → cellular organisms	40.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	20.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13.64 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.82 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	4.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	7.27 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	7.27 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Oryzihumus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Oryzihumus	7.27 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Oryzihumus leptocrescens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Oryzihumus → Oryzihumus leptocrescens	7.27 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005175\|Ga0066673_10645829	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005331\|Ga0070670_100197400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Oryzihumus → Oryzihumus leptocrescens	1748	Open in IMG/M
3300005344\|Ga0070661_101165911	Not Available	644	Open in IMG/M
3300005406\|Ga0070703_10074963	Not Available	1139	Open in IMG/M
3300005434\|Ga0070709_11433970	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005436\|Ga0070713_100272847	Not Available	1549	Open in IMG/M
3300005436\|Ga0070713_101406773	Not Available	676	Open in IMG/M
3300005436\|Ga0070713_101438994	All Organisms → cellular organisms → Bacteria → Terrabacteria group	668	Open in IMG/M
3300005436\|Ga0070713_102038162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300005441\|Ga0070700_101514010	Not Available	571	Open in IMG/M
3300005445\|Ga0070708_100586067	Not Available	1051	Open in IMG/M
3300005466\|Ga0070685_11082379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300005471\|Ga0070698_101165527	Not Available	720	Open in IMG/M
3300005586\|Ga0066691_10574665	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005616\|Ga0068852_102518953	Not Available	534	Open in IMG/M
3300005937\|Ga0081455_10513118	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300006028\|Ga0070717_10401452	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300006173\|Ga0070716_100418360	Not Available	968	Open in IMG/M
3300006175\|Ga0070712_101933751	Not Available	516	Open in IMG/M
3300006755\|Ga0079222_11028160	Not Available	713	Open in IMG/M
3300006755\|Ga0079222_11203958	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300006804\|Ga0079221_10308819	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300006871\|Ga0075434_100215615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1939	Open in IMG/M
3300006881\|Ga0068865_101388549	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300007265\|Ga0099794_10392695	Not Available	724	Open in IMG/M
3300009012\|Ga0066710_103304227	Not Available	616	Open in IMG/M
3300010048\|Ga0126373_12808339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300010335\|Ga0134063_10166258	Not Available	1028	Open in IMG/M
3300010358\|Ga0126370_11867025	Not Available	583	Open in IMG/M
3300010373\|Ga0134128_11771795	Not Available	679	Open in IMG/M
3300010400\|Ga0134122_12343672	Not Available	580	Open in IMG/M
3300011107\|Ga0151490_1019280	Not Available	644	Open in IMG/M
3300011269\|Ga0137392_10133942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Oryzihumus → Oryzihumus leptocrescens	1989	Open in IMG/M
3300012207\|Ga0137381_10081308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Oryzihumus → Oryzihumus leptocrescens	2722	Open in IMG/M
3300012210\|Ga0137378_11822191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	512	Open in IMG/M
3300012353\|Ga0137367_10188914	Not Available	1495	Open in IMG/M
3300012356\|Ga0137371_10542199	Not Available	896	Open in IMG/M
3300012519\|Ga0157352_1020220	Not Available	800	Open in IMG/M
3300012924\|Ga0137413_10348688	Not Available	1050	Open in IMG/M
3300012957\|Ga0164303_10349877	Not Available	892	Open in IMG/M
3300013307\|Ga0157372_11928713	Not Available	679	Open in IMG/M
3300013307\|Ga0157372_12487394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	594	Open in IMG/M
3300014968\|Ga0157379_10673393	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300015242\|Ga0137412_10804416	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300015265\|Ga0182005_1301739	Not Available	505	Open in IMG/M
3300016319\|Ga0182033_10837929	Not Available	812	Open in IMG/M
3300021088\|Ga0210404_10842709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	524	Open in IMG/M
3300021374\|Ga0213881_10193553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	897	Open in IMG/M
3300021401\|Ga0210393_11679443	Not Available	503	Open in IMG/M
3300021475\|Ga0210392_11329821	Not Available	537	Open in IMG/M
3300021559\|Ga0210409_10079597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Oryzihumus → Oryzihumus leptocrescens	3038	Open in IMG/M
3300021560\|Ga0126371_12660014	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300022718\|Ga0242675_1050386	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300024222\|Ga0247691_1017760	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300024284\|Ga0247671_1071394	Not Available	568	Open in IMG/M
3300024290\|Ga0247667_1039112	Not Available	895	Open in IMG/M
3300024323\|Ga0247666_1094350	Not Available	595	Open in IMG/M
3300025898\|Ga0207692_10518472	Not Available	758	Open in IMG/M
3300025906\|Ga0207699_10160311	Not Available	1497	Open in IMG/M
3300025908\|Ga0207643_10200291	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300025910\|Ga0207684_10741188	Not Available	833	Open in IMG/M
3300025916\|Ga0207663_10775435	Not Available	762	Open in IMG/M
3300025920\|Ga0207649_11317311	Not Available	571	Open in IMG/M
3300025927\|Ga0207687_10441658	Not Available	1078	Open in IMG/M
3300025942\|Ga0207689_10058049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3183	Open in IMG/M
3300025972\|Ga0207668_10685079	Not Available	900	Open in IMG/M
3300026075\|Ga0207708_10117629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Oryzihumus → Oryzihumus leptocrescens	2068	Open in IMG/M
3300026118\|Ga0207675_101796622	All Organisms → cellular organisms → Bacteria → Terrabacteria group	632	Open in IMG/M
3300026340\|Ga0257162_1013866	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300026374\|Ga0257146_1021061	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300026497\|Ga0257164_1088684	Not Available	528	Open in IMG/M
3300027307\|Ga0209327_1051940	Not Available	594	Open in IMG/M
3300027787\|Ga0209074_10287643	Not Available	652	Open in IMG/M
3300027903\|Ga0209488_10549921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	842	Open in IMG/M
3300028718\|Ga0307307_10205887	Not Available	623	Open in IMG/M
3300028721\|Ga0307315_10248790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	558	Open in IMG/M
3300028875\|Ga0307289_10180322	Not Available	869	Open in IMG/M
3300028881\|Ga0307277_10040984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Oryzihumus → Oryzihumus leptocrescens	1868	Open in IMG/M
3300028906\|Ga0308309_10415852	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300031184\|Ga0307499_10070828	Not Available	900	Open in IMG/M
3300031681\|Ga0318572_10205305	Not Available	1151	Open in IMG/M
3300031765\|Ga0318554_10257226	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300031768\|Ga0318509_10061509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Oryzihumus → Oryzihumus leptocrescens	1946	Open in IMG/M
3300031771\|Ga0318546_10639703	Not Available	748	Open in IMG/M
3300031778\|Ga0318498_10069312	Not Available	1583	Open in IMG/M
3300031781\|Ga0318547_10424104	Not Available	818	Open in IMG/M
3300031820\|Ga0307473_10402096	Not Available	898	Open in IMG/M
3300031821\|Ga0318567_10014860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3661	Open in IMG/M
3300031835\|Ga0318517_10222560	Not Available	851	Open in IMG/M
3300031835\|Ga0318517_10516268	Not Available	538	Open in IMG/M
3300031860\|Ga0318495_10364260	Not Available	639	Open in IMG/M
3300031890\|Ga0306925_10465921	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300031910\|Ga0306923_10594157	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300031912\|Ga0306921_10392119	Not Available	1621	Open in IMG/M
3300031941\|Ga0310912_10816019	Not Available	720	Open in IMG/M
3300031947\|Ga0310909_10109385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Oryzihumus → Oryzihumus leptocrescens	2232	Open in IMG/M
3300031947\|Ga0310909_11618381	Not Available	513	Open in IMG/M
3300032008\|Ga0318562_10081434	Not Available	1817	Open in IMG/M
3300032043\|Ga0318556_10609361	Not Available	569	Open in IMG/M
3300032066\|Ga0318514_10087350	Not Available	1566	Open in IMG/M
3300032090\|Ga0318518_10200592	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300032090\|Ga0318518_10436322	Not Available	671	Open in IMG/M
3300032091\|Ga0318577_10499669	Not Available	580	Open in IMG/M
3300032174\|Ga0307470_11469551	Not Available	565	Open in IMG/M
3300032180\|Ga0307471_101835211	Not Available	757	Open in IMG/M
3300032828\|Ga0335080_11527546	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300032954\|Ga0335083_10683648	Not Available	835	Open in IMG/M
3300033412\|Ga0310810_10439884	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300033475\|Ga0310811_11106672	Not Available	671	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.45%
Host-Associated	Host-Associated	14.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.45%
Plants	Host-Associated → Plants	14.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.45%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.64%
Loam	Environmental → Terrestrial → Soil → Loam	19.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.82%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.91%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024284	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300027307	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066673_106458292	3300005175	Soil	MSAPGPTVRSVDQVAGSEISPGVTVREMLNSDHGCRGLHQRRLGLAAGTRLAGTVGGQGEAWYVITGTGSLGTERAGSAALAPGTAVWLEPGGYACEGDGLEILAVTVRAG
Ga0066675_103698331	3300005187	Soil	MSAPGPAVRSVDQVAGSEISPGVTVREMLNSDHGCRGLHQRRLGIDAGARLAGTADGQGEAWYVITGTGSL
Ga0070670_1001974002	3300005331	Switchgrass Rhizosphere	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAWARLAGTGGGQGEAWYVITGTGSLGT
Ga0070661_1011659112	3300005344	Corn Rhizosphere	MSADRPVVRRPDQVAGAETSAGVTVRQMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPG
Ga0070703_100749631	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTAVWLEPGCGYACEGDGLEILA
Ga0070709_114339701	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSAPGPAVRSLDQVAGSEISPGVTVREMLNADHGCRGLHQRRLGVAAGARLAGTAGGRGEAWYVITGSGSLDTERAGSAALAP
Ga0070713_1002728471	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSADRPVVRRPNQVAGAEVAPGVTVREMLNDDHGCRGLHQRRLKIAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPG
Ga0070713_1014067732	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSAPGPTVRSLDQVAGREISPGVTVREMLNTDHGCRGLHQRRLGVTAGARLAGTAGGQGEAWYVITGTGSLDTERAGSAALAPGTAVWLEPGTGYDARADGELAVLAVTL
Ga0070713_1014389942	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSADRPVVRHPNQVAGAETSAGVTAREMLNDDHGCRGLHQRRLEVADGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTA
Ga0070713_1020381622	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSAPGPAVRSLDQVAGSEISPGVTVREMLNADHGCRGLHQRRLGVAAGARLAGTAGGRGEAWYVITGSGSLDTERAGPAALAPGTAVWLEPGTGYD
Ga0070700_1015140102	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLEVADGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTAVWLEPG
Ga0070708_1005860671	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSAEGPAVRSLDQVATGPLGPGVTAAEMLGDAQGCRGLHQRRLGFAAGARLPGTAGGRGEAWYVITGTGSLDTERTGSLALAPGTAVWL
Ga0070685_110823791	3300005466	Switchgrass Rhizosphere	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTAVWLEPGGGYACEGDGL
Ga0070698_1011655272	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSAGPVVRSLARVPGTPLGPGVTVAEMLSDEHGCRGLHQRRLRFTAGARLAGTAGGRGEAWYVITGTGSLDTERAGSAALAPGTAVWLEPG
Ga0066691_105746651	3300005586	Soil	MSAPGPAVRSVDQVAGSEISPGVTVREMLNADHGCRGLHQRRLGVAAGARLAGTAGGRGEAWYVITGSGSLDTERAGSTALAPG
Ga0068852_1025189531	3300005616	Corn Rhizosphere	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAP
Ga0081455_105131181	3300005937	Tabebuia Heterophylla Rhizosphere	MSADRPVVRRLNQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTAVWLEPGGGYACAGD
Ga0070717_104014522	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERA
Ga0070716_1004183602	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSAPGPAVRSLDQVAGSEISPGVTVREMLNADHGCRGLHQRRLGVAAGARLAGTAGGRGEAWYVITGSGSLDTERAGSAALAPGTAVWLEPGTGYDCHADGELAVL
Ga0070712_1019337512	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSAPGPAVRSVDQVAGSEIGPGVTVREMLNADHGCRGLHQRRLGVAAGARLAGTAGGRGEAWYVITGSGSLDTERAGSAALAPGTAVWLEPGTG
Ga0079222_110281601	3300006755	Agricultural Soil	MSADRPVVRRPDQVAGAEISPGVTVRDMLNEDHGCRGLHQRRLRVAAGARLAGTAGGRGEAWYVITGTGSLGTERAGSAALAPGTAVW
Ga0079222_112039582	3300006755	Agricultural Soil	MSAPGPAVRSVDQVAGHEISPGVTVREMLNADHGCRGLHQRRLGIAAGARLAGTAGGQGEAWYVITGTGSLDTERAGPLALAPGTAVWLEPGLGYACQGEGLEILAVTVRAGSEC
Ga0079221_103088191	3300006804	Agricultural Soil	MSAGPSVRNLGQVAATPLGAGVTAAELLNDDDGCRRLHQRRLGFAGGARLAGTAGGRGEAWYVITGTGSLETERTGPIALAPGTAVWLAPGCGFACRGENLEVLAVTVR
Ga0075434_1002156153	3300006871	Populus Rhizosphere	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPG
Ga0068865_1013885492	3300006881	Miscanthus Rhizosphere	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTAVWLEPGRGYACEGDGLEILAVTVRAGS
Ga0099794_103926951	3300007265	Vadose Zone Soil	MGIDQPAPAVRRPDQVPGRTLGPGVTARELLNDEHGCRGLHHRRLRFAGGASLTGTAGGQGEAWYVITGTGLMDTERSGNIALAPGTAIWLEPALGYACQAQPGQDLEV
Ga0066710_1033042271	3300009012	Grasslands Soil	MSADSPVVRRLNQVAGAETSPGATVREMLNDDHGCRGLHQRRLGLAGGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALASGTAVWLESGGGYACEGDGLEILA
Ga0126373_128083392	3300010048	Tropical Forest Soil	MSAGPAVRSLEQVPAVPLGSGVTAAELLNDDHGCRGLHQRRLGFAGGARLAGTAGGRGEAWYVITGTGSLESERTGSLALAPGTAVWLEPGCGFTCHG
Ga0134063_101662582	3300010335	Grasslands Soil	MSAPGPAVRSVDQVAGSEISPGVTVREMLNSDHGCRGLHQRRLGIDAGARLAGTADGQGEAWYVITGTGSLDAERAGSAALAPGT
Ga0126370_118670252	3300010358	Tropical Forest Soil	MSAGPAVRHLGQVPAAPLGPGVTATELLNDDDGCRGLHQRRLGFAAAARLAGTAGGRGEAWYVITGTGSLDTERAGFVALAPGTAVWLEPGAGYDCRADG
Ga0134128_117717951	3300010373	Terrestrial Soil	MSADRPVVRRPDQVAGAEISPGVTVREMLNEDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTER
Ga0134122_123436721	3300010400	Terrestrial Soil	MSTDKPVVRRLNQVAGAETSAGVTAREMLNDDHGCRGLHQRRLGVAAGARLAGTASGQGEAWYVITGTGSLGTERAGSAALAPGTAVWLEPGG
Ga0151490_10192802	3300011107	Soil	MSEDRPVVRRPDQVAGAETSAGVTAREMLNDDHGCRGLHQRRLRFTAGARLTGTAGGRGEAWYVITGTGSLDTER
Ga0137392_101339422	3300011269	Vadose Zone Soil	VTVAEMLTGDQGCHGLHQRRLRLVNGAQNAGTAAGLGEAWYVITGTGLLDAERAGRIALAPGTAVWLEPGGAYGCQGQDLEILAVTVQAGAAADG
Ga0137381_100813083	3300012207	Vadose Zone Soil	VTVAEMLTGDQGCHGLHQRRLRLVNGAQNAGTAAGLGEAWYVIAGTGLLDAERAGRIALAPGTAVWLEPGAGYDCRADGELAVLVVTLRAGSECAGPSRPVVRLAD
Ga0137378_118221911	3300012210	Vadose Zone Soil	MAEVPGRTLGPGVTVVELLNQDQGCRGLHQRRLSFASGASLAGTAGGQGEAWYVITGTGLMDTERMGTIALAPGTAIWLEPDHGYTCQGQELEILAVTVRAGTATGG
Ga0137367_101889142	3300012353	Vadose Zone Soil	MSADRPVVRRPDQVAGAEISPGVTVRDMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAA
Ga0137371_105421992	3300012356	Vadose Zone Soil	MSAPGPAVRSLDQVAGHEISPGVTVREMLNADHGCRGLHQRRLGVAAGARLAGTAGGRGEAWYVITGSGSLDTERAG
Ga0157352_10202202	3300012519	Unplanted Soil	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTAVWLEPGGGYACEGDGLEIL
Ga0137413_103486881	3300012924	Vadose Zone Soil	MSTPGPAVRSLDQVAGREISPGVTVREMLNADHGCRGLHQRRLGVTAGARLAGTAGGQGEAWYVITGTGSLDTERAGSAALAPGTAVWLEPGTGYDAQ
Ga0164303_103498771	3300012957	Soil	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAGNVITGTGSRGTERAGSAVLAPGTAVWLEPGGAY
Ga0157372_119287131	3300013307	Corn Rhizosphere	MSAPGPAVRSLDQVAGSEISPGVTVREMLNADHGCRGLHQRRLGVAAGARLAGTAAGRGEAWYVTTGSGSLDTER
Ga0157372_124873942	3300013307	Corn Rhizosphere	MSADRPVVRRLNQVAGAETSAGVTAREMLNDDHGCRGLHQRRLEVADGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTAVWLEPGGGYACEGDGLEILAVTVRAGSP
Ga0157379_106733931	3300014968	Switchgrass Rhizosphere	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTAVW
Ga0137412_108044162	3300015242	Vadose Zone Soil	MSGDRPVVRRPNQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGRGEAWYVITGTGSLGTERAGSAALAPGTAVWLEPGTGYDCHADGELAVLAV
Ga0182005_13017391	3300015265	Rhizosphere	MSADSPVVRRLNQVAGAETSPGATVREMLNDDHGCRGLHQRRLGLAAEARLAGTVGGQGEAWYVITGTGSLGTERAGS
Ga0182033_108379291	3300016319	Soil	MSAGPAVRSLEQVPGLVISPGVTVREMLTADHGCRGLHQRRLGLAGAAQLAGTAGGRGEAWYVITGTGFLDTERTGHLALAPGTAVWLEPGLEYACQGDGLEI
Ga0210404_108427091	3300021088	Soil	MSAGPVVRSLAHVPRTPLGPGVTVAEMLSDEHGCRGLHQRRLRFTAGARLAGTAGGRGEAWYVITGTGSLDTERAGSAALAPGTAVWLEPGAGYDCQANGELAVLAATVQ
Ga0213881_101935531	3300021374	Exposed Rock	MSAGPAVRQLSEVTASPVTRGVTAAEMLGDAQGCQGLHQRRLSLAGGARLAGAGGGQGEAWYVITGTGFLETERTGRVALAPGTALWLEPGAGYTC
Ga0210393_116794431	3300021401	Soil	MSAGPVVRSLAHVPGTPLGPGVTVAEMLSDEHGCRGLHQRRLRFTAGARLAGTAGGRGEAWYMITGTGSLDTERAGSAALAPGTAVWLEPGAG
Ga0210392_113298212	3300021475	Soil	MSADRPVVRRPNQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGS
Ga0210409_100795973	3300021559	Soil	MSAPGPAVRSVDQVAGSEISPGVTVREMLNSDHGCRGLHQRRLGIAAGARLAGTAGGQGEAWYVITGTGSLDAERAGSAALAPGTAVWLEPGTGYDA
Ga0126371_126600142	3300021560	Tropical Forest Soil	MSAGPAVRTLDQVAGLESSPGVTVREMLNSDHGCRGLHQRRLGVAAGARLAGTAGGRGEAWYVITGTGSLDTERAGPLALAPG
Ga0242675_10503861	3300022718	Soil	MADTTGIVRRPEHVPAGALAPGVTAAEMLNDEHGCRGLHQRRLGIAAGARLAGTAGGQGEAWYVITGTGSLDTERAGSAALAPGTAVWLEPGTGYDAQADGELAVLAVTVRAGSEC
Ga0247691_10177601	3300024222	Soil	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAVLAP
Ga0247671_10713942	3300024284	Soil	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTAVWLEPGGGYACE
Ga0247667_10391121	3300024290	Soil	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTAV
Ga0247666_10943502	3300024323	Soil	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAAL
Ga0207692_105184722	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTAVWLEPGGGYT
Ga0207699_101603111	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSAPGPAVRSLDQVAGSEISPGVTVREMLNADHGCRGLHQRRLGVAAGARLAGTAGGRGEAWYVITGSGSLDTERAGSAALAPGTAV
Ga0207643_102002912	3300025908	Miscanthus Rhizosphere	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTAVWLEP
Ga0207684_107411882	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VSAEGPAVRSLDQVATGPLGPGVTAAEMLGDAQGCRGLHQRRLGFAAGARLAGTAGGRGEAWYVITGTGSLDTERTGFLALAPGTA
Ga0207663_107754352	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSAPGPAVRSVDQVAGSEISPGVTVREMLNADHGCRGLHQRRLGVTAGARLAGTAGGQGEAWYVITGTGSLDTERAGSAALAPGTAVWLEPGTGYDCHADGELAVLAVT
Ga0207649_113173112	3300025920	Corn Rhizosphere	MSADRPVVRRPDQVAGAETSAGVTVRQMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAVLAP
Ga0207687_104416581	3300025927	Miscanthus Rhizosphere	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTGGGQGEAWYVITGTGSLGTERAGSAVLAPGTAVWLEPGGGYACEGDGLEILAV
Ga0207689_100580493	3300025942	Miscanthus Rhizosphere	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTAVWLEPGGGYACEGDGLEILAVTVRAGSP
Ga0207668_106850791	3300025972	Switchgrass Rhizosphere	MSADRPVVRRLNQVAGAETSAGVTAREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAVLAPGTAVWLEPGGGYACEGDGLEILAVTVRAGSPG
Ga0207708_101176291	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MSADRPVVRRPDQVAGAETSAGVTVREMLNDDHGCRGLHQRRLEVADGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTAVWLEPGGGYACEGDGLEILA
Ga0207675_1017966221	3300026118	Switchgrass Rhizosphere	MSADRPVVRRLNQVAGAETSAGVTAREMLNDDHGCRGLHQRRLEVADGARLAGTAGGQGEAWYVITGTGSLGTE
Ga0257162_10138662	3300026340	Soil	VSAEGPVVRSLGQVPGATLGPGVTATEMLNDDHGCRGLHQRRLGFAGGARLAGTAGGQGEAWYVISGTGSLDTERAGS
Ga0257146_10210612	3300026374	Soil	VSAEGPVVRSLGQVPGATLGPGVTATEMLNDDHGCRGLHQRRLAVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTAVWLEPGGGYACEG
Ga0257164_10886842	3300026497	Soil	VSAEGPVVRSLGQVPGATLGPGVTATEMLNDDHGCRGLHQRRLGFAGGARLAGTAGGRGEAWYVISGTGSLDTERAGFAALAPGTAVWLGPGAGYDC
Ga0209327_10519401	3300027307	Forest Soil	MSADRPVVRRPNQVAGAETSAGVTVREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAP
Ga0209074_102876432	3300027787	Agricultural Soil	MSADRPVVRRPDQVAGAEISPGVTVRDMLNEDHGCRGLHQRRLRVAAGARLAGTAGGRGEAWYVITGTGSLGTERAGSAALAPGTAVWLEPGGGYACEGDGLEILAVTVRAGSPAT
Ga0209488_105499212	3300027903	Vadose Zone Soil	MSTPGPAVRSLDQVAGHEISPGVTVREMLNADHGCRGLHQRRLGIAAGARLAGTAGGRGEAWYVITGSGSLDTERAGSAALAPGTAVWLEPGTGYD
Ga0307307_102058871	3300028718	Soil	MSADRPVVRRLNQVAGAETSAGVTAREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSVALAPGTAVW
Ga0307315_102487902	3300028721	Soil	MSADRPVVRRLNQVAGAETSTGVTAREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSV
Ga0307289_101803222	3300028875	Soil	MSADRPVVRRLNQVAGAETSTGVTAREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSVALAPGTAVWLEPGGGYACEGDGLEILAVTVRAGSP
Ga0307277_100409841	3300028881	Soil	MSADRPVVRRPDQVAGAEISPGVTARAMLNEDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSVALAPGTAVWLEPGGGYACEGDGLEILAVTVRAGS
Ga0308309_104158522	3300028906	Soil	MSAPGPAVRSVDQVAGSEISPGVTVREMLNSDHGCRGLHQRRLGIAAGARLAGTAGGQGEAWYVITGTGSLDAERAGSAALAPGTAVWLEPGTGY
Ga0307499_100708282	3300031184	Soil	MSGDRPVVRRPDQVAGAEISPGVTVREMLTDDHGCRGLHQRRLGVAAGARLAGTADGRGEAWYVITGTGSLDTERAGSAALAPGTAVWLEPGGGYACEGDGLDILAVTVRAGSP
Ga0318572_102053052	3300031681	Soil	MSAGPAVRSLGQVPGRELSPGVTAAELLNDDHGCRGLHQRRLGFASGARLAGTAGGRGEAWYVITGTGSLESERTGSLALAPGTAMW
Ga0318554_102572261	3300031765	Soil	MSAGPAVRSLGQVPGREISPGVTVREMLTGDHGCRGLHQRRLGLTGAARLAGTAGGRGEAWYVITGTGSLATERAGPV
Ga0318509_100615091	3300031768	Soil	MSAGPAVRSLGQVPGRELSPGVTAAELLTDDHGCRGLHQRRLGFASGARLAGTAGGRGEAWYVITGTGSLESERTGSL
Ga0318546_106397031	3300031771	Soil	MSAGPAVRSLDQVAGLESSPGVTVREMLNSDHGCRGLHQRRLGVAAGARLAGTAGGRGEAWYVITGTGFLDTERA
Ga0318498_100693122	3300031778	Soil	MSAGPAVRSLGQVPGREISPGVTVREMLTGDHGCRGLHQRRLGLTGAARLAGTAGGRGEAWYVITGTGSLAAERAGQVALAPGTAVWLEPGLGYACQADGDLEVLAVTLRAGP
Ga0318547_104241041	3300031781	Soil	MSAGPAVRSLAQVPGLQISPGVTVREMLTADHGCRGLHQRRLGFTGAARLAGTAGGRGEAWYVITGTGSLAAERAGQVALAPGTAVWLEPGLGYACQADGDLEVLAVTLRAGPECA
Ga0307473_104020961	3300031820	Hardwood Forest Soil	MSADRPVVRRLNQVAGAETSAGVTAREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGRGEAWYVITGSGSLDTE
Ga0318567_100148606	3300031821	Soil	MSAGPAVRSLGQVPGRELSPGVTAAELLNDDHGCRGLHQRRLGFASGARLAGTAGGRGEAWYVITGTGSLESERTGSLALAPGTAVWLEPGCGY
Ga0318517_102225601	3300031835	Soil	MSAGPAVRSLDQVAGLESSPGVTVREMLNSDHGCRGLHQRRLGVAAGAGLAGTAGGCGEAWYVISGTGSLDTER
Ga0318517_105162681	3300031835	Soil	MSAGPAVRSLDQVAGLESSPGVTVREMLNSDHGCRGLHQRRLGVAAGARLAGTAGGRGEAWYVITGTGFLDTERAGPLALA
Ga0318495_103642602	3300031860	Soil	MSAGPAVRSLGQVPGREISPGVTVREMLTGDHGCRGLHQRRLGLTGAARLAGTAGGRGEAWYVITGTGSLATERAGQVALAPGTAVWREPGLGYACQADGDLE
Ga0306925_104659212	3300031890	Soil	MSAGPAVRSLGQVPGRELSPGVTAAELLNDDHGCRGLHQRRLGFASGARLAGTAGGRGEAWYVITGTGSLESERTGSLALASGTAVWLEPGCGYTCHGEGLEV
Ga0306923_105941571	3300031910	Soil	MSAGPAVRSLGQVPGREISPGVTVREMLTGDHGCRGLHQRRLGLTGAARLAGTAGGRGEAWYVITGTGSLATERAGQVALAPGTAVWLEPGLGYACQADGDLEVLAVTLRAGPECAG
Ga0306921_103921191	3300031912	Soil	MSAGPAVRSLGQVPGRELSPGVTAAELLNDDHGCRGLHQRRLGFASGARLAGTAGGRGEAWYVITGTGSLESERTGSLALASGTAVWLEPGC
Ga0310912_108160191	3300031941	Soil	MSAGPAVRSLGQVPGRELSPGVTAAELLNDDHGCRGLHQRRLGFASGARLAGTAGGRGEAWYVITGTGSLESERTGSLALAPGTAVWLEPGCGYTCHGEGLEVLAVTVR
Ga0310909_101093851	3300031947	Soil	MSAGPAVRSLGQVPGREISPGVTVREMLTADHGCRGLHQRRLGFAGAARLAGTAGGRGEAWYVITGTGSLATERAGQVALAPGTAVWLEPGLGYACQADGDLEVLAVTLRAG
Ga0310909_116183812	3300031947	Soil	MSAGPAVRSLEQVPGLVISPGVTVREMLTADHGCRGLHQRRLGFAGAARLAGTAGGWGEAWYVITGTGFLDTERTGHLALAPGTAVWLEPGLGYACQGDGL
Ga0318562_100814341	3300032008	Soil	MSAGPAVRSLGQVPGREISPGVTVREMLTGDHGCRGLHQRRLGLTGAARLAGTAGGRGEAWYVITGTGSLATERAGQVALAPGTAVWLEPGLGYACQADGDLEVLAVTLRAGP
Ga0318556_106093611	3300032043	Soil	MSAGPAVRSLAQVPGLQISPGVTVRDMLTADHGCHGLHQRRLGFTGAARLAGTAGGRGEAWYVITGTGSLATERAGPVALAPGTAVWLEPGLGYACQ
Ga0318514_100873501	3300032066	Soil	MSAGPAVRSLGQVPGRELSPGVTAAELLNDDHGCRGLHQRRLGFASGARLAGTAGGRGEAWYVITGTGSLESERTGSLALAPGTAVWLEPGCGYTCHGEGLE
Ga0318518_102005922	3300032090	Soil	MSAGPAVRSLDQVAGLESSPGVTVREMLNSDHGCRGLHQRRLGVAAGAGLAGTAGGCGEAWYVISGTGSLDTE
Ga0318518_104363222	3300032090	Soil	MSAGPAVRSLGQVPGREISPGVTVREMLTGDHGCRGLHQRRLGLTGAARLAGTAGGRGEAWYVITGTGSLATERAG
Ga0318577_104996691	3300032091	Soil	MSAGPAVRSLGQVPGREISPGVTVREMLTGDHGCRGLHQRRLGFASGARLAGTAGGRGEAWYVITGTGSLATERAGQVALAPGTAVWLEPGLGYACQA
Ga0307470_114695512	3300032174	Hardwood Forest Soil	MSADRPVVRHPNQVAGAETSAGVTAREMLNDDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLDTE
Ga0307471_1018352111	3300032180	Hardwood Forest Soil	MTAGPAVRNPGQVPGREISPGVTVREMLTADHGCRGLHQRRLGFAGGARLAGTAGGRGEAWYVITGTGSLDTERTGQVALAPGTAVWLEPGLRYACVPDAALEVL
Ga0335080_115275462	3300032828	Soil	MSAGPAVRRLQQVPGLVISPGVTVRDMLTADHGCHGLHQRRLGFTGAARLAGTAGGRGEAWYVITGTGSLATERAGPVALAPGTAVWL
Ga0335083_106836482	3300032954	Soil	MSAGRKAAVVRRAAEVPARPLGPGVTAAGMLHDDQGCRGLHQRRLRFTGGAGLTAAAGGQGEAWYVITGTGVLDTERTGSIALAPGTAVWLDPD
Ga0310810_104398841	3300033412	Soil	MSADRPVVRRPDQVAGAEISPGVTVREMLNEDHGCRGLHQRRLGVAAGARLAGTAGGQGEAWYVITGTGSLGTERAGSAALAPGTAVWLETGRGYACEGDGLEI
Ga0310811_111066722	3300033475	Soil	MSAPGPAVRSLDQVAGREISPGVTVREMLNADHGCRGLHQRRLGVAAGARLAGAAGGRGEAWYVITGSGSMDTERA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087653

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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