Metagenome / Metatranscriptome Family F087686

Basic Information
Family ID	F087686
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	90 residues
Representative Sequence	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMGGRTHQDFTAALQAVARILGS
Number of Associated Samples	84
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.55 %
% of genes near scaffold ends (potentially truncated)	11.82 %
% of genes from short scaffolds (< 2000 bps)	73.64 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (54.545 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (40.909 % of family members)
Environment Ontology (ENVO)	Unclassified (40.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.182 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.89% β-sheet: 0.00% Coil/Unstructured: 41.11%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00072	Response_reg	2.73
PF17167	Glyco_hydro_36	2.73
PF01936	NYN	2.73
PF01381	HTH_3	2.73
PF01904	DUF72	2.73
PF12844	HTH_19	2.73
PF13620	CarboxypepD_reg	1.82
PF14337	Abi_alpha	1.82
PF09650	PHA_gran_rgn	1.82
PF01068	DNA_ligase_A_M	1.82
PF05239	PRC	0.91
PF13545	HTH_Crp_2	0.91
PF12833	HTH_18	0.91
PF00011	HSP20	0.91
PF04191	PEMT	0.91
PF14903	WG_beta_rep	0.91
PF12728	HTH_17	0.91
PF00589	Phage_integrase	0.91
PF03235	DUF262	0.91
PF13391	HNH_2	0.91
PF13560	HTH_31	0.91
PF00593	TonB_dep_Rec	0.91
PF03571	Peptidase_M49	0.91
PF00069	Pkinase	0.91
PF03358	FMN_red	0.91
PF11999	Ice_binding	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.64
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	2.73
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	2.73
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.82
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.82
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG1479	DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains	Defense mechanisms [V]	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
All Organisms	root	All Organisms	45.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
cellular organisms	root	All Organisms → cellular organisms	45.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	19.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.64 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.73 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.91 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	1.82 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.82 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.91 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.82 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	1.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10096821	Not Available	580	Open in IMG/M
3300001593\|JGI12635J15846_10039778	All Organisms → cellular organisms → Bacteria	3672	Open in IMG/M
3300001593\|JGI12635J15846_10105759	All Organisms → cellular organisms → Bacteria → Proteobacteria	2011	Open in IMG/M
3300002245\|JGIcombinedJ26739_101393846	Not Available	594	Open in IMG/M
3300002917\|JGI25616J43925_10389157	Not Available	513	Open in IMG/M
3300004091\|Ga0062387_101018489	Not Available	636	Open in IMG/M
3300005534\|Ga0070735_10000926	All Organisms → cellular organisms → Bacteria	29539	Open in IMG/M
3300005534\|Ga0070735_10001583	All Organisms → cellular organisms → Bacteria	21768	Open in IMG/M
3300005534\|Ga0070735_10187613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1269	Open in IMG/M
3300006172\|Ga0075018_10710848	Not Available	544	Open in IMG/M
3300006640\|Ga0075527_10090570	Not Available	841	Open in IMG/M
3300006864\|Ga0066797_1323693	Not Available	539	Open in IMG/M
3300007258\|Ga0099793_10090416	Not Available	1406	Open in IMG/M
3300007265\|Ga0099794_10437683	Not Available	685	Open in IMG/M
3300007788\|Ga0099795_10050861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1509	Open in IMG/M
3300007788\|Ga0099795_10659642	Not Available	501	Open in IMG/M
3300009029\|Ga0066793_10413057	Not Available	774	Open in IMG/M
3300009038\|Ga0099829_10277668	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300009088\|Ga0099830_11308808	Not Available	602	Open in IMG/M
3300009089\|Ga0099828_10042588	All Organisms → cellular organisms → Bacteria → Acidobacteria	3729	Open in IMG/M
3300009090\|Ga0099827_10362373	Not Available	1234	Open in IMG/M
3300009143\|Ga0099792_10172973	Not Available	1209	Open in IMG/M
3300010379\|Ga0136449_102320692	All Organisms → cellular organisms → Bacteria → Acidobacteria	777	Open in IMG/M
3300010860\|Ga0126351_1118669	Not Available	812	Open in IMG/M
3300011120\|Ga0150983_11560419	Not Available	568	Open in IMG/M
3300011269\|Ga0137392_10336939	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300011269\|Ga0137392_10889769	Not Available	733	Open in IMG/M
3300011270\|Ga0137391_10631665	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300011271\|Ga0137393_10373254	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1220	Open in IMG/M
3300011271\|Ga0137393_10882032	Not Available	764	Open in IMG/M
3300011271\|Ga0137393_11661370	Not Available	528	Open in IMG/M
3300012096\|Ga0137389_11175680	Not Available	657	Open in IMG/M
3300012198\|Ga0137364_11151133	Not Available	582	Open in IMG/M
3300012202\|Ga0137363_10759274	Not Available	822	Open in IMG/M
3300012203\|Ga0137399_10503222	Not Available	1016	Open in IMG/M
3300012203\|Ga0137399_11016874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300012206\|Ga0137380_10713916	Not Available	870	Open in IMG/M
3300012207\|Ga0137381_10214634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1669	Open in IMG/M
3300012359\|Ga0137385_10763435	Not Available	805	Open in IMG/M
3300012363\|Ga0137390_10124033	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2559	Open in IMG/M
3300012363\|Ga0137390_11876857	Not Available	528	Open in IMG/M
3300012683\|Ga0137398_10211785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	1281	Open in IMG/M
3300012683\|Ga0137398_10258700	Not Available	1161	Open in IMG/M
3300012917\|Ga0137395_10053803	All Organisms → cellular organisms → Bacteria	2542	Open in IMG/M
3300012917\|Ga0137395_10190959	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300012917\|Ga0137395_10514748	Not Available	862	Open in IMG/M
3300012923\|Ga0137359_10038988	All Organisms → cellular organisms → Bacteria	4107	Open in IMG/M
3300012925\|Ga0137419_10257357	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1318	Open in IMG/M
3300012927\|Ga0137416_11335415	Not Available	648	Open in IMG/M
3300012927\|Ga0137416_12130042	Not Available	515	Open in IMG/M
3300012944\|Ga0137410_10020366	All Organisms → cellular organisms → Bacteria	4562	Open in IMG/M
3300012944\|Ga0137410_10566528	Not Available	935	Open in IMG/M
3300014501\|Ga0182024_10092146	All Organisms → cellular organisms → Bacteria → Proteobacteria	4454	Open in IMG/M
3300014501\|Ga0182024_10115013	All Organisms → cellular organisms → Bacteria	3868	Open in IMG/M
3300015193\|Ga0167668_1107366	Not Available	508	Open in IMG/M
3300015242\|Ga0137412_10087496	All Organisms → cellular organisms → Bacteria	2534	Open in IMG/M
3300015245\|Ga0137409_10769824	Not Available	797	Open in IMG/M
3300020004\|Ga0193755_1043502	Not Available	1472	Open in IMG/M
3300020170\|Ga0179594_10000273	All Organisms → cellular organisms → Bacteria	13821	Open in IMG/M
3300020199\|Ga0179592_10033486	All Organisms → cellular organisms → Bacteria	2320	Open in IMG/M
3300020579\|Ga0210407_10393823	Not Available	1084	Open in IMG/M
3300020580\|Ga0210403_10060365	All Organisms → cellular organisms → Bacteria	3037	Open in IMG/M
3300020581\|Ga0210399_10224057	All Organisms → cellular organisms → Bacteria → Acidobacteria	1566	Open in IMG/M
3300020581\|Ga0210399_10437615	Not Available	1090	Open in IMG/M
3300020583\|Ga0210401_10029212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22	5255	Open in IMG/M
3300021170\|Ga0210400_10001527	All Organisms → cellular organisms → Bacteria	22839	Open in IMG/M
3300021170\|Ga0210400_10022625	All Organisms → cellular organisms → Bacteria → Acidobacteria	4894	Open in IMG/M
3300021170\|Ga0210400_10077177	Not Available	2615	Open in IMG/M
3300021178\|Ga0210408_11286792	Not Available	555	Open in IMG/M
3300021420\|Ga0210394_10232441	Not Available	1612	Open in IMG/M
3300021420\|Ga0210394_11744690	Not Available	520	Open in IMG/M
3300021478\|Ga0210402_10219715	Not Available	1750	Open in IMG/M
3300021559\|Ga0210409_10354291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1318	Open in IMG/M
3300026376\|Ga0257167_1008437	Not Available	1329	Open in IMG/M
3300026515\|Ga0257158_1056365	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300026557\|Ga0179587_10163315	All Organisms → cellular organisms → Bacteria → Proteobacteria	1394	Open in IMG/M
3300027546\|Ga0208984_1111923	Not Available	590	Open in IMG/M
3300027565\|Ga0209219_1154561	Not Available	550	Open in IMG/M
3300027587\|Ga0209220_1134185	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300027591\|Ga0209733_1016096	All Organisms → cellular organisms → Bacteria	2003	Open in IMG/M
3300027591\|Ga0209733_1114338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300027616\|Ga0209106_1043931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	994	Open in IMG/M
3300027645\|Ga0209117_1198856	Not Available	506	Open in IMG/M
3300027651\|Ga0209217_1169309	Not Available	599	Open in IMG/M
3300027660\|Ga0209736_1004260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4729	Open in IMG/M
3300027663\|Ga0208990_1021562	All Organisms → cellular organisms → Bacteria	2094	Open in IMG/M
3300027674\|Ga0209118_1048368	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300027674\|Ga0209118_1192121	Not Available	553	Open in IMG/M
3300027678\|Ga0209011_1149017	Not Available	658	Open in IMG/M
3300027875\|Ga0209283_10359326	All Organisms → cellular organisms → Bacteria → Acidobacteria	954	Open in IMG/M
3300027882\|Ga0209590_10275332	Not Available	1077	Open in IMG/M
3300027903\|Ga0209488_10091919	All Organisms → cellular organisms → Bacteria	2268	Open in IMG/M
3300027986\|Ga0209168_10004556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9163	Open in IMG/M
3300027986\|Ga0209168_10005075	All Organisms → cellular organisms → Bacteria → Acidobacteria	8572	Open in IMG/M
3300027986\|Ga0209168_10060627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2004	Open in IMG/M
3300028047\|Ga0209526_10046981	All Organisms → cellular organisms → Bacteria	3038	Open in IMG/M
3300028047\|Ga0209526_10317008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1052	Open in IMG/M
3300028536\|Ga0137415_10503684	Not Available	1019	Open in IMG/M
3300028792\|Ga0307504_10391272	Not Available	545	Open in IMG/M
3300030991\|Ga0073994_12398432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2445	Open in IMG/M
3300030991\|Ga0073994_12398575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1386	Open in IMG/M
3300031057\|Ga0170834_112266564	Not Available	605	Open in IMG/M
3300031128\|Ga0170823_12819430	Not Available	701	Open in IMG/M
3300031231\|Ga0170824_122227176	Not Available	642	Open in IMG/M
3300031234\|Ga0302325_12673924	Not Available	589	Open in IMG/M
3300031236\|Ga0302324_101537023	Not Available	862	Open in IMG/M
3300031708\|Ga0310686_105893425	Not Available	769	Open in IMG/M
3300031708\|Ga0310686_106970035	Not Available	2310	Open in IMG/M
3300031823\|Ga0307478_11232305	Not Available	623	Open in IMG/M
3300032180\|Ga0307471_102833144	Not Available	616	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.18%
Aquatic	Environmental → Aquatic	1.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.36%
Peat	Environmental → Terrestrial → Peat	1.82%
Freshwater	Environmental → Aquatic → Freshwater	0.91%
Sediment	Environmental → Aquatic → Sediment	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.55%
Loam	Environmental → Terrestrial → Soil → Loam	18.18%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.18%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.82%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	40.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	18.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.82%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.82%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.91%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.91%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.91%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.91%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_100968212	3300001545	Forest Soil	MNEEQISPGAYLQKRITERSRKVAKSNNAAGYVTMWPEAVKEVLAKFPNLSPDERAALRGNVDGQIHSMGGRTHQDFTAALQSVARILGS*
JGI12635J15846_100397787	3300001593	Forest Soil	MNEEQMSPGAYLQKRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKYPNLSPDEKAALRGNVDGQIHSMGGRTHQDFTAALHAVARIFGS*
JGI12635J15846_101057591	3300001593	Forest Soil	MNEEKLSPGAYLQQRITERSRKVAKSNNTAGYVAMWPEAVKEVLAKFPNLSPDEKEALRGNVDGQIHSMGGRTHQDFTAALQAVARILG*
JGIcombinedJ26739_1013938462	3300002245	Forest Soil	MNEEKLSPGAYLQQRITERSRKVAKSNNIAGYVAMWPEAVKEVLAKFPNLSPDEKEALRGNVDGQIHSMGGRTHQDFTAALQAVARILG*
JGI25616J43925_103891571	3300002917	Grasslands Soil	MNEEKISPGAYFQRQITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTNQDFTAALQAVARILGS*
Ga0062387_1010184892	3300004091	Bog Forest Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMGARTKQDFTAALQAVARVLGS*
Ga0070735_1000092610	3300005534	Surface Soil	MNEEHMSPGAYLQKRITERSRKVAKSNNTAGYVAMWPEAVKDVLAKFPNLSPDEKEALRGNVDGQIHSMGGRTHQDFTAALHAVARILGS*
Ga0070735_1000158327	3300005534	Surface Soil	MNEEKLSPGAYLQKRITERSRKVAKSNSAAGYVAMWPEAVKEVLEKFPNLSPDEKEALRGNVDGQIHSMGGRIHQDFTAALQAVARILGS*
Ga0070735_101876132	3300005534	Surface Soil	MNEEKLSPGAYLQKCITERSRKVAKSNNAAGYVAMWPEAVKEVLEKFPNLSPDEKEALRGNVDGQIHSMGGRTHQDFTAALHAVARILGS*
Ga0075018_107108481	3300006172	Watersheds	MNEEQMTPGAYLQRRITERSRKVAKSNNSAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMGARTKQDFTAALQAVARVLGS*
Ga0075527_100905702	3300006640	Arctic Peat Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLVKFPNLSPTDKAALRGNVDGQIHSMGARTKQDFTAALQAVARVLGS*
Ga0066797_13236931	3300006864	Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPTDKAALRGNVDGQIHSMGARTKQDFTAALQAVARVLEP*
Ga0099793_100904162	3300007258	Vadose Zone Soil	MNEEKISPGAYFQRQITERSRKVAKSNNAAGYVAMWPEAVKEVLVKFPNLSPDEKAALRGNVDGQIHSMGGRTNQDFTAALQAVARILGS*
Ga0099794_104376831	3300007265	Vadose Zone Soil	MNEEKLSPGAYLQKRITERSRKVAKSNNAAGYVAMWPEAVKEVLARFPNLSPDEKEALRGNVDGQIHSMGGRTRQDFTAALHAVARILES*
Ga0099795_100508612	3300007788	Vadose Zone Soil	MNEEKLSPGAYLQKRITERSRKVAKSHNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTRQDFTAALQAVARILGS*
Ga0099795_106596421	3300007788	Vadose Zone Soil	MNEEKLSPGAYLQKRITERSRKVAKSNNTAGYVAMWPEAVKEVLAKFPNLSPDEKEALRGNVDGQIHSMGGRTHQDFTAALQAVARILGS*
Ga0066793_104130572	3300009029	Prmafrost Soil	QMNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKTALRGNVDGQIHSMGARTKQDFTAALQAVARVLGS*
Ga0099829_102776682	3300009038	Vadose Zone Soil	MNEEKISPGAFLQQQITQRSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPAEKMALRGNVDGQIHSMGARTKQDCTAALQAVARILGS*
Ga0099830_113088081	3300009088	Vadose Zone Soil	MNEQQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKDVLAKFPNLSPADKAALRGNVDGQIHSMGGRTHQDFTAALQAVARILGA*
Ga0099828_100425882	3300009089	Vadose Zone Soil	MNEEQISPGAYLQKRIVQRTRKVAKTNNSAGYVAMWPEAVKEVLAKFPDLSSAEKSALRGYVEGQIQSMSTRTRQDFTAAVQAVARILGS*
Ga0099827_103623732	3300009090	Vadose Zone Soil	MSDEQISPGAYLQKRIVQRTRKVAKTNNSAGYVSMWPEAVKEVLAKFPTLSSAEKSALRCYVEGQIHSMSTRTRQDFTAAVQAVAQILGS*
Ga0099792_101729732	3300009143	Vadose Zone Soil	MNEEKISPGAYFQRQITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTNQDFTAALQAVARILES*
Ga0136449_1023206922	3300010379	Peatlands Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMSARTKQDFTAALQAVARVLG*
Ga0126351_11186691	3300010860	Boreal Forest Soil	MNEEKLSPGAYLQQRITEKSRKVAKSNNTAGYVAMWPEAVKEVLAKFPNLSPDEKEALRGNVDGQIHSMGGRTHQDFTAALQAVARILG*
Ga0150983_115604191	3300011120	Forest Soil	MNEQQMTPGAYLQRRITERSRKVAKGNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMGGRTHQDFTAALQAVARVLGS*
Ga0137392_103369391	3300011269	Vadose Zone Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPTDKAALRGNVDGQIHSMGGRTHQDFTAALHAVARILGS*
Ga0137392_108897691	3300011269	Vadose Zone Soil	MNEQQMTPGAYLQRRITERSRKVAKGNNAAGYVAMWPEAVKEVLAKFPNLSSADKAALRGNVDGQIHSMGGRTHQDFTAALQAVARILGS*
Ga0137391_106316652	3300011270	Vadose Zone Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLTKCPNLSPADKAALRGTVEGQIHSMGGRPHQDFTTALQAVARVFGS*
Ga0137393_103732542	3300011271	Vadose Zone Soil	MNEEQMSPGAYLQKRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPTDKAALRGNVDGQIHSMGARTKQDFTAALQAVARVLES*
Ga0137393_108820321	3300011271	Vadose Zone Soil	MNEEKLSPGAYLQKRITERSRKVAKSNNTAGYVAMWPEAVKEVLAKFPNLSPAEKMALRSNVEGQIHSMGARTHQDFTAALQAVARILGS*
Ga0137393_116613701	3300011271	Vadose Zone Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMGGRTHQDFTAALQAVARILGS*
Ga0137389_111756801	3300012096	Vadose Zone Soil	MNEEKISPGAFLQQQITQRSRKVAKTNNAAGYVAMWPEAVKEVLAKFPNLSLAEKAALRGNVDGQIHSMGARTKQDFTAALQAVARILG
Ga0137364_111511331	3300012198	Vadose Zone Soil	AYFQRQITERSRKVAKSNNAAGYVAMWPDAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTNQDFTAALQAVARILGS*
Ga0137363_107592741	3300012202	Vadose Zone Soil	MNEQQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGSVDGQIHSMGARTHQDFTAALQAVARVLGS*
Ga0137399_105032221	3300012203	Vadose Zone Soil	MNEEKSSPGAFLQQQITQRLRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPSEKAALRGNVDGQIHSMGGRTNQDFTAALQAVARILGS*
Ga0137399_110168741	3300012203	Vadose Zone Soil	MGVKAMNEEKISPGAYFQRQITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTNQDFTAALQAVARILGS*
Ga0137380_107139162	3300012206	Vadose Zone Soil	MNEEKISPGAFLQKQITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGARTKQDCTAALQVVARILGS*
Ga0137381_102146342	3300012207	Vadose Zone Soil	MNEEKISPGAYFQRQITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGARTKQDCTAALQVVARILGS*
Ga0137385_107634351	3300012359	Vadose Zone Soil	MNEEKISPGAFLQKQITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSLAEKAALRGNVDGQIHSMGARTKQDFTAALQAVARILGS*
Ga0137390_101240334	3300012363	Vadose Zone Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAQFPNLSPTDKAALRGNVDGQIHSMGARTHQDFTAALQAVARVLGS*
Ga0137390_118768571	3300012363	Vadose Zone Soil	MNEQKISPGTFLLQQITQRLRKVAKSNNAAGYVAMWPEAVKEVLAKFSNLSLAEKAALRGNVDGQIHSMGARTKQDFTAALQAVARILGS*
Ga0137398_102117852	3300012683	Vadose Zone Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGARTKQDFTAALQAVARVLGS*
Ga0137398_102587003	3300012683	Vadose Zone Soil	MNEEKLSPGAYLQKQITERSRKVAKSNNTAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTRQDFTAALQAVARILGS*
Ga0137395_100538033	3300012917	Vadose Zone Soil	MNEEKISPGAFLQQQITQRSRKVAKTNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTHQDFTAALQAVARILGS*
Ga0137395_101909592	3300012917	Vadose Zone Soil	MSTISPGAFLQQRITEMSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTHQDFTAALQAVARILGS*
Ga0137395_105147482	3300012917	Vadose Zone Soil	MNEQQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMGGRTHQDFTAALQAVARILGS*
Ga0137359_100389885	3300012923	Vadose Zone Soil	MNEEKLSPGAYLQKQITERSRKVAKSNNAAGYVAMWSEAVKEVLAKFPNLSPDEKETLRGNVDGQIHSMGGRTHQDFTAALHAVARILET*
Ga0137419_102573572	3300012925	Vadose Zone Soil	MNEEKLSPGAYLQKRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKEALRGNVDGQIHSMGGRTHQDFTAALHAVARILGS*
Ga0137416_113354151	3300012927	Vadose Zone Soil	MNEEKLSPGAYLQKRITERSRKVAKSHNAAGYVAMWPEAVKEVLAKFPNLSPDEKEALRGNVDGQIHSMGGRTHQDFTAALHAVARILGS*
Ga0137416_121300422	3300012927	Vadose Zone Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMGARTKQDFTPALQAVARVLGS*
Ga0137410_100203663	3300012944	Vadose Zone Soil	MNEEKISPGAYLQRQITERSRKVAKSNKAAGYVAMWPEAVKEVLAKFPNLSPAEKAALRGNVDGQIHSMGGRTNQDFTAALHAVARILGS*
Ga0137410_105665282	3300012944	Vadose Zone Soil	MQMNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGSVDGQIHSMGARTHQDFTAALQAVARVLGS*
Ga0182024_100921466	3300014501	Permafrost	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPTDKEALRGNVDGQIHSMSARTKQDFTAALQAVSRVLGS*
Ga0182024_101150131	3300014501	Permafrost	MNEEQMTPGAYLQRRITERSRKVAKSNNATGYVAMWSEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMGARTKQDFTAALQAVARVLGS*
Ga0167668_11073661	3300015193	Glacier Forefield Soil	MNEEQISPGAYLQKRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTHQDFTAALQAVARILGS*
Ga0137412_100874962	3300015242	Vadose Zone Soil	MNEEKLSPGAYLQKRITERSRKVAKSHNAAGYVAMWSEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTHQDFTAALQAVARILGS*
Ga0137409_107698242	3300015245	Vadose Zone Soil	YLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGSVDGQIHSMGARTHQDFTAALQAVARVLGS*
Ga0193755_10435023	3300020004	Soil	MNEEQMTPGAYLQRRIRERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMGARTKQDFTAALQAVARVLGS
Ga0179594_100002736	3300020170	Vadose Zone Soil	MNEEKISPGAYFQRQITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTNQDFTAALQAVARILGS
Ga0179592_100334864	3300020199	Vadose Zone Soil	MNEQQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGSVDGQIHSMGARTHQDFTAALQAVARVLGS
Ga0210407_103938232	3300020579	Soil	MIEQQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGTVEGQIHSMGGRTHQDFTTALQAVARVFGS
Ga0210403_100603656	3300020580	Soil	MTEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMGGRTHQDFTAALQAVARVLGS
Ga0210399_102240574	3300020581	Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMGGRTHQDFT
Ga0210399_104376151	3300020581	Soil	MNEQQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGTIEGQIHSMGGRTHQDFTTALQAVARVFGS
Ga0210401_100292125	3300020583	Soil	MNQEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGTVEGQIHSMGGRTHQDFTAALQAVARVLGS
Ga0210400_1000152713	3300021170	Soil	MNEEKISPGAYLQQRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGARTRQDFTAALQAVARILGS
Ga0210400_100226258	3300021170	Soil	MNEEQMSPGAYLQKRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKEALRGNVDGQIHSMGGRTRQDFTAALQAVARILGS
Ga0210400_100771772	3300021170	Soil	MRGIAFRKDTLLRNGVKQMNEEKLSPGAYLQQRITEKSRKVAKGNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMAARTKQDCTAALQSVARILGS
Ga0210408_112867921	3300021178	Soil	QMNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHLMGARTKQDFTAALQAVARVLGS
Ga0210394_102324412	3300021420	Soil	MNEEKLSPGAYLQQRITERSRKVAKSNNTAGYVAMWPEAVKEVLAKFPNLTPDEKEALRGNVDGQIHSMGGRTHQDFTAALQAVARILG
Ga0210394_117446902	3300021420	Soil	MNEEQMTPGAYLQRRITERSRKLAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMGGRTHQDFTAALQAVARVLGS
Ga0210402_102197152	3300021478	Soil	MNEQQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGTVEGQIHSMGGRTHQDFTTALQAVARVFGS
Ga0210409_103542913	3300021559	Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHLMGARTKQDFTAALQAVARVLGS
Ga0257167_10084373	3300026376	Soil	RQITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTNQDFTAALQAVARILGS
Ga0257158_10563652	3300026515	Soil	MNEEKISPGAYLQQRITERSRKVAKSNNATGYVAMWPEAVKEVLARFPSLSAAEKAALRGNVDGQIHSMGGRTNQDFTAALHAIARILGS
Ga0179587_101633151	3300026557	Vadose Zone Soil	MNEQQMTPGAYLQRRITERSRKVAKGNNAAGYVAMWPEAVKEVLAKFPNLSPTDKAALRGTVEGQIHSMGGRTHQDFTTALQAVARVFGL
Ga0208984_11119232	3300027546	Forest Soil	MNEEKISPGAYFQRQITERSRKVAKSNNAAGYAAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTNQDFTAALQAVARILGS
Ga0209219_11545611	3300027565	Forest Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNTAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGARNKQDFTAALQSVARILGS
Ga0209220_11341852	3300027587	Forest Soil	MNEEQMSPGAYLQKRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKYPNLSPDEKAALRGNVDGQIHSMGGRTHQDFTAALHAVARIFGS
Ga0209733_10160961	3300027591	Forest Soil	MYLVARLSPGAYLQRRITEKSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTHQDFTAALHAVARIFGS
Ga0209733_11143382	3300027591	Forest Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMGARTKQDFTAALQAVARVLGS
Ga0209106_10439312	3300027616	Forest Soil	MNEEKISPGAYFQRQITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTNQDFTAALQAVARILG
Ga0209117_11988561	3300027645	Forest Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNTGGYVAMWPEAVKEVLAKFPNLSPAEKAALRGNVDGQIHSMGARTRQDFTAALQAVSRILGS
Ga0209217_11693091	3300027651	Forest Soil	MNEEQISPGAYLQKRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTHQDFTAALHAVARILGS
Ga0209736_10042601	3300027660	Forest Soil	MNEEKLSPGAYLQQRITERSRKVAKSNNTAGYVAMWPEAVKEVLAKFPNLSPDEKEALRGNVDGQIHSMGGRTHQDFTAALQAVARILG
Ga0208990_10215621	3300027663	Forest Soil	MNEEKISPGAYFQRQITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTNQDFTAALQ
Ga0209118_10483682	3300027674	Forest Soil	MSEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMGARTKQDFTAALQAVARVLGS
Ga0209118_11921211	3300027674	Forest Soil	MNEEKISPGAFLQQQITKRSRKVAKSSNAAGYVAMWPEAVKEVLAKFPNLSPAEKAALRGNVDGQIHSMGGRTNQDFTAALHAVAQILGS
Ga0209011_11490172	3300027678	Forest Soil	MNEEQISPGAYLQKRITERSRKVAKSNNAAGYVTMWPEAVKEVLAKFPNLSPAEKAALRGNVDGQIHSMGARTRQDFTAALQAVSRILGS
Ga0209283_103593262	3300027875	Vadose Zone Soil	MNEEQISPGAYLQKRIVQRTRKVAKTNNSAGYVAMWPEAVKEVLAKFPDLSSAEKSALRGYVEGQIQSMSTRTRQDFTAAVQAVARILGS
Ga0209590_102753322	3300027882	Vadose Zone Soil	MSDEQISPGAYLQKRIVQRTRKVAKTNNSAGYVSMWPEAVKEVLAKFPTLSSAEKSALRCYVEGQIHSMSTRTRQDFTAAVQAVAQILGS
Ga0209488_100919192	3300027903	Vadose Zone Soil	MNEEKLSPGAYLQKRITERSRKVAKSNNTAGYVAMWPEAVKEVLAKFPNLSPDEKEALRGNVDGQIHSMGGRTHQDFTAALHAVARILES
Ga0209168_100045561	3300027986	Surface Soil	MNEEKLSPGAYLQKRITERSRKVAKSNSAAGYVAMWPEAVKEVLEKFPNLSPDEKEALRGNVDGQIHSMGGRIHQDFTAALQAVARILGS
Ga0209168_100050758	3300027986	Surface Soil	MRGVASGVDTLLRSGDENKMNEEHMSPGAYLQKRITERSRKVAKSNNTAGYVAMWPEAVKDVLAKFPNLSPDEKEALRGNVDGQIHSMGGRTHQDFTAALHAVARILGS
Ga0209168_100606273	3300027986	Surface Soil	MNEEKLSPGAYLQKCITERSRKVAKSNNAAGYVAMWPEAVKEVLEKFPNLSPDEKEALRGNVDGQIHSMGGRTHQDFTAALHAVARILGS
Ga0209526_100469814	3300028047	Forest Soil	MNEEQMSPGAYLQKRITERSRKVAKSNNSAGYVTMWPEAVKEVLAKFPNLSPDERAALRGNVDGQIHSMGGRTHQDFTAALQSVARILGS
Ga0209526_103170081	3300028047	Forest Soil	MNEEQMTPGAYLQRTITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPAEKSALRGNVDGQIHSMGARTKQDCTAALQAVARILGS
Ga0137415_105036843	3300028536	Vadose Zone Soil	MNEEKLSPGAYLQKRITERSRKVAKSHNAAGYVAMWPEAVKEVLAKFPNLSPDEKEALRGNVDGQIHSMGGRTHQDFTAALQAVARILGS
Ga0307504_103912722	3300028792	Soil	MNEQQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMGGRTHQDFTAALQAVARILGS
Ga0073994_123984322	3300030991	Soil	MNEEKLSPGAYLQQRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMGARTKQDFTAALQAVARVLGS
Ga0073994_123985752	3300030991	Soil	MNKEKISPGAYFQRQITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNVDGQIHSMGGRTNQDFTAALQAVARILGS
Ga0170834_1122665642	3300031057	Forest Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLTKFPNLSPDEKEALRGNVDGQIHSIAARTKQDCTAALQSIARIFGS
Ga0170823_128194301	3300031128	Forest Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKEALRGNVDGQIHSMGGRTHQDFTAALQAVARILGS
Ga0170824_1222271761	3300031231	Forest Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPCDQAALRGTVEGQIHSMSGRTHQDFTTALQAVARVFGS
Ga0302325_126739242	3300031234	Palsa	HPILKPIDEEKISPGAFLQQRITEMSRKVAKTNNAAGYVAMWPEAVKEVLAKFPNLSPAEKAALRGNVDGQIHSMGARTKQDFTAALQAVARILGS
Ga0302324_1015370233	3300031236	Palsa	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEVVKEVLTKFPNLSPAEKVALRGHVDGQIHSMGARTHQDFTAALQAVARILGS
Ga0310686_1058934251	3300031708	Soil	MNEEQLTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPDEKAALRGNIDGQIHSMGARTHQDWTAALQAVARILGS
Ga0310686_1069700353	3300031708	Soil	MTPGAYLQRRITERSRKVAKSNNVAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMGGRTHQDFTAALQQVARILGS
Ga0307478_112323051	3300031823	Hardwood Forest Soil	MNEEQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSPADKAALRGNVDGQIHSMSGRTHQDFTAALQAVSRVLGS
Ga0307471_1028331441	3300032180	Hardwood Forest Soil	MIEQQMTPGAYLQRRITERSRKVAKSNNAAGYVAMWPEAVKEVLAKFPNLSSDEKAALRGNVDGQIHSMGGRTNKDFTAALQAVARILGS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087686

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign