Metagenome Family F087801

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087801
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	139 residues
Representative Sequence	MVRCLLIAAAVALLAAATPTATIQKPKAQTVTGGICRLTDDGSTLGVNIGPNATMPTLALTIGPRSAMADALHANTAKFAGPGKYANEIVALYLGKTALEDSYMGLGTVTIAADGKSGSFALNDGKAAGTFDCGAPPAK
Number of Associated Samples	85
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.55 %
% of genes near scaffold ends (potentially truncated)	31.82 %
% of genes from short scaffolds (< 2000 bps)	73.64 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.81

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.182 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (14.546 % of family members)
Environment Ontology (ENVO)	Unclassified (23.636 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.909 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 7.78% β-sheet: 34.73% Coil/Unstructured: 57.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.81
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.81
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
f.4.1.3: GNA1870 immunodominant domain-like	d3hola1	3hol	0.58595
f.4.1.0: automated matches	d3qraa_	3qra	0.57025
f.4.1.1: Outer membrane protein	d1p4ta_	1p4t	0.56968
f.4.1.3: GNA1870 immunodominant domain-like	d3hola2	3hol	0.56713
f.4.4.0: automated matches	d2x55a1	2x55	0.56402

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF13282	DUF4070	3.64
PF07228	SpoIIE	2.73
PF14559	TPR_19	2.73
PF00082	Peptidase_S8	2.73
PF02687	FtsX	2.73
PF01019	G_glu_transpept	1.82
PF13646	HEAT_2	1.82
PF06983	3-dmu-9_3-mt	1.82
PF13620	CarboxypepD_reg	1.82
PF00072	Response_reg	0.91
PF00873	ACR_tran	0.91
PF03551	PadR	0.91
PF02423	OCD_Mu_crystall	0.91
PF16811	TAtT	0.91
PF00903	Glyoxalase	0.91
PF00174	Oxidored_molyb	0.91
PF01636	APH	0.91
PF06445	GyrI-like	0.91
PF13174	TPR_6	0.91
PF08327	AHSA1	0.91
PF00115	COX1	0.91
PF01850	PIN	0.91
PF01957	NfeD	0.91
PF00691	OmpA	0.91
PF00069	Pkinase	0.91
PF08241	Methyltransf_11	0.91
PF07730	HisKA_3	0.91
PF00920	ILVD_EDD	0.91
PF00326	Peptidase_S9	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.64
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	1.82
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	1.82
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	1.82
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	1.82
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.91
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.91
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.91
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.91
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.91
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.91
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.91
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.91
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.91
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.18 %
Unclassified	root	N/A	41.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.18 %
Unclassified	root	N/A	41.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.18 %
Unclassified	root	N/A	41.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.82 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	32.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.82 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.18 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.82 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.91 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.55 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.18 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.55 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.27 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.91 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.91 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.91 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.55 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	1.82 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.82 %
Methylosinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus	0.91 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.91 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.91 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.55 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1.82 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1.82 %
Methylosinus trichosporium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → Methylosinus trichosporium	0.91 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.91 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.91 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.55 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1.82 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1.82 %
Micromonospora echinospora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora echinospora	0.91 %
Methylosinus trichosporium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → Methylosinus trichosporium	0.91 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.91 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10110027	Not Available	1136	Open in IMG/M
3300003324\|soilH2_10245330	All Organisms → cellular organisms → Bacteria → Acidobacteria	1178	Open in IMG/M
3300004156\|Ga0062589_100435750	Not Available	1079	Open in IMG/M
3300004479\|Ga0062595_100563068	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300004479\|Ga0062595_101362593	Not Available	643	Open in IMG/M
3300005093\|Ga0062594_100230092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1331	Open in IMG/M
3300005293\|Ga0065715_10619846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora echinospora	696	Open in IMG/M
3300005327\|Ga0070658_10950592	Not Available	747	Open in IMG/M
3300005445\|Ga0070708_102101310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → Methylosinus trichosporium	522	Open in IMG/M
3300005458\|Ga0070681_10772782	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300005458\|Ga0070681_11004026	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300005468\|Ga0070707_100052784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3898	Open in IMG/M
3300005529\|Ga0070741_10003129	All Organisms → cellular organisms → Bacteria	41952	Open in IMG/M
3300005529\|Ga0070741_10004192	All Organisms → cellular organisms → Bacteria	34029	Open in IMG/M
3300005530\|Ga0070679_100450019	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300005531\|Ga0070738_10011861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7603	Open in IMG/M
3300005531\|Ga0070738_10162940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1070	Open in IMG/M
3300005532\|Ga0070739_10009128	All Organisms → cellular organisms → Bacteria	9942	Open in IMG/M
3300005533\|Ga0070734_10000630	All Organisms → cellular organisms → Bacteria	67009	Open in IMG/M
3300005533\|Ga0070734_10040806	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	2871	Open in IMG/M
3300005536\|Ga0070697_100192804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1730	Open in IMG/M
3300005544\|Ga0070686_100250210	Not Available	1294	Open in IMG/M
3300005547\|Ga0070693_100519036	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	848	Open in IMG/M
3300005563\|Ga0068855_100925865	Not Available	919	Open in IMG/M
3300005713\|Ga0066905_101881954	Not Available	553	Open in IMG/M
3300005764\|Ga0066903_101367294	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300005764\|Ga0066903_102042498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1102	Open in IMG/M
3300006028\|Ga0070717_10548409	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300006046\|Ga0066652_101008976	Not Available	790	Open in IMG/M
3300006163\|Ga0070715_10573585	Not Available	657	Open in IMG/M
3300006806\|Ga0079220_11866512	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300006854\|Ga0075425_100002292	All Organisms → cellular organisms → Bacteria	19131	Open in IMG/M
3300006903\|Ga0075426_10099716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2083	Open in IMG/M
3300006903\|Ga0075426_11168558	Not Available	583	Open in IMG/M
3300006954\|Ga0079219_10077225	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300006954\|Ga0079219_12493599	Not Available	503	Open in IMG/M
3300007076\|Ga0075435_100001234	All Organisms → cellular organisms → Bacteria	16378	Open in IMG/M
3300009093\|Ga0105240_10006633	All Organisms → cellular organisms → Bacteria	16988	Open in IMG/M
3300009098\|Ga0105245_10070528	All Organisms → cellular organisms → Bacteria	3171	Open in IMG/M
3300010048\|Ga0126373_10050205	All Organisms → cellular organisms → Bacteria	3706	Open in IMG/M
3300010048\|Ga0126373_10142166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2271	Open in IMG/M
3300010048\|Ga0126373_10353808	Not Available	1481	Open in IMG/M
3300010048\|Ga0126373_12021494	Not Available	639	Open in IMG/M
3300010361\|Ga0126378_10672169	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1148	Open in IMG/M
3300010361\|Ga0126378_11582824	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	744	Open in IMG/M
3300010366\|Ga0126379_10076516	All Organisms → cellular organisms → Bacteria → Acidobacteria	2879	Open in IMG/M
3300010376\|Ga0126381_100076833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4185	Open in IMG/M
3300010376\|Ga0126381_100197365	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2687	Open in IMG/M
3300010376\|Ga0126381_100694528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1455	Open in IMG/M
3300010396\|Ga0134126_10477548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1439	Open in IMG/M
3300010397\|Ga0134124_13210462	Not Available	501	Open in IMG/M
3300012212\|Ga0150985_111543452	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300012469\|Ga0150984_118668407	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300012971\|Ga0126369_11779858	Not Available	705	Open in IMG/M
3300013306\|Ga0163162_11496580	Not Available	769	Open in IMG/M
3300014969\|Ga0157376_12360419	Not Available	571	Open in IMG/M
3300015371\|Ga0132258_10934638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2190	Open in IMG/M
3300016341\|Ga0182035_10213505	All Organisms → cellular organisms → Bacteria	1535	Open in IMG/M
3300016341\|Ga0182035_11049030	Not Available	724	Open in IMG/M
3300020580\|Ga0210403_10395152	Not Available	1129	Open in IMG/M
3300021405\|Ga0210387_11226018	Not Available	651	Open in IMG/M
3300021560\|Ga0126371_10026442	All Organisms → cellular organisms → Bacteria → Acidobacteria	5398	Open in IMG/M
3300021560\|Ga0126371_10179753	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	2199	Open in IMG/M
3300021560\|Ga0126371_11149908	All Organisms → cellular organisms → Bacteria → Acidobacteria	914	Open in IMG/M
3300021560\|Ga0126371_11470463	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300021560\|Ga0126371_13805420	Not Available	509	Open in IMG/M
3300025905\|Ga0207685_10424440	Not Available	686	Open in IMG/M
3300025909\|Ga0207705_10214593	Not Available	1460	Open in IMG/M
3300025913\|Ga0207695_10048153	All Organisms → cellular organisms → Bacteria → Acidobacteria	4504	Open in IMG/M
3300025921\|Ga0207652_10027717	All Organisms → cellular organisms → Bacteria	4723	Open in IMG/M
3300025922\|Ga0207646_10151342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2093	Open in IMG/M
3300025923\|Ga0207681_10879343	Not Available	750	Open in IMG/M
3300025924\|Ga0207694_11592202	Not Available	551	Open in IMG/M
3300025927\|Ga0207687_10133440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1875	Open in IMG/M
3300025939\|Ga0207665_10440378	Not Available	998	Open in IMG/M
3300025949\|Ga0207667_11867828	Not Available	563	Open in IMG/M
3300025960\|Ga0207651_11393723	Not Available	631	Open in IMG/M
3300025981\|Ga0207640_10181099	Not Available	1580	Open in IMG/M
3300026041\|Ga0207639_10564887	Not Available	1046	Open in IMG/M
3300026142\|Ga0207698_10948203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300027706\|Ga0209581_1005289	All Organisms → cellular organisms → Bacteria → Acidobacteria	9930	Open in IMG/M
3300027773\|Ga0209810_1062458	Not Available	1860	Open in IMG/M
3300027775\|Ga0209177_10426135	Not Available	537	Open in IMG/M
3300027817\|Ga0209112_10002996	All Organisms → cellular organisms → Bacteria	4345	Open in IMG/M
3300027826\|Ga0209060_10006546	All Organisms → cellular organisms → Bacteria → Acidobacteria	7931	Open in IMG/M
3300027826\|Ga0209060_10227028	All Organisms → cellular organisms → Bacteria → Acidobacteria	857	Open in IMG/M
3300031231\|Ga0170824_114985154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	2347	Open in IMG/M
3300031366\|Ga0307506_10371875	Not Available	578	Open in IMG/M
3300031543\|Ga0318516_10378517	Not Available	816	Open in IMG/M
3300031573\|Ga0310915_10466015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300031715\|Ga0307476_10665060	Not Available	772	Open in IMG/M
3300031716\|Ga0310813_10321209	Not Available	1311	Open in IMG/M
3300031716\|Ga0310813_10881238	Not Available	810	Open in IMG/M
3300031720\|Ga0307469_10273768	Not Available	1374	Open in IMG/M
3300031820\|Ga0307473_10011770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3217	Open in IMG/M
3300031890\|Ga0306925_10463474	Not Available	1353	Open in IMG/M
3300031890\|Ga0306925_10504637	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300031890\|Ga0306925_11447153	Not Available	675	Open in IMG/M
3300031912\|Ga0306921_12248996	Not Available	573	Open in IMG/M
3300031941\|Ga0310912_11195674	Not Available	579	Open in IMG/M
3300031942\|Ga0310916_10661752	Not Available	885	Open in IMG/M
3300032076\|Ga0306924_10639857	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300032076\|Ga0306924_11119263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300032205\|Ga0307472_102241175	Not Available	552	Open in IMG/M
3300032261\|Ga0306920_100484562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1836	Open in IMG/M
3300032261\|Ga0306920_100688435	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300032954\|Ga0335083_10876714	Not Available	714	Open in IMG/M
3300033004\|Ga0335084_11490754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300033412\|Ga0310810_10736182	Not Available	907	Open in IMG/M
3300034817\|Ga0373948_0001218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.27%
Host-Associated	Host-Associated	22.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.27%
Plants	Host-Associated → Plants	22.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.18%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.18%
Loam	Environmental → Terrestrial → Soil → Loam	17.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.55%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.82%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_101100272	3300001867	Forest Soil	MPPVLRREILLAAAVLLLASLAGAQAKATIQKPKTVTVTGGRCLLKTDGTLGVNIGPNATMPTLAFTIGPGAFMADQMHANKAKFAGPGRYANEIVAVYLGKTAMEDSYMGLGTVTVAADGRSGTFALNDGKAAGIFDCGAAPTKP*
soilH2_102453302	3300003324	Sugarcane Root And Bulk Soil	RGARGYNQPMVTHALFALATLAAAQPTAVIQKPRTQNTGGGMCRISGDGTTLGVNVGPNPALPVLALTVGPGAAMADALHANKAKFAGPGKYSNEIIAVYLGKTALDDSYLGLGTVTVAADGKSGTFALNDGNPAGTFDCGAPPAK*
Ga0062589_1004357502	3300004156	Soil	MVRYLLIAVAVAPLAAATPTATIQKPKAQTVTGGICRLTDDGNTLGVNIGPNEKMRTLALTIGPGNPMADAVHANTAKFTGAGKYANEIIALYLGKTALEDSYLGLGTVTIAADGKSGTFALNDGTAAGTFDCGAPPAK*
Ga0062595_1005630682	3300004479	Soil	MMTAGCWVLAATVALAAAPPTATIQKPTPLTLSGGVCRIQNDGTLGVNIGPNSPTPKFTLTIGPGDFMAQQMHANLAKFSGPGKYPNVAMAVYVGKTATEDYMGLGTVTINADGKSGTFALNDGKASGSFDCGQLAK*
Ga0062595_1013625931	3300004479	Soil	KTQAVAGGICRVTDDGSTLGVNIGPNPAMPALALTVGPRAAMADQMHANKAKFLGPGKYDNELMALYLGKTALEDSYLGLGTVTIAADGKSGSFALNDGKAAGTFDCGAPPSK*
Ga0062594_1002300921	3300005093	Soil	AAPTATIQKPKAQTVTGGICRLTADGSTLGVNIGPNAAMPALALTVGPRAAMADALHANTAKFAGPGKYANEIMALYLGKTPLEDSYMGLGTVTIAADGKSGSFALNDGKAAGTFDCGAPPAK*
Ga0065715_106198461	3300005293	Miscanthus Rhizosphere	MVRYLLIAAAVAPLAAATPTATIQKPKAQTVTGGICRLTDDGSTLGVNIGPNAKMPTLALTIGPRSAMADALHANMAKFAGPGKYANEIVALYLGKTALEDSYMGLGTVTIAADAKSGTFALNDGKASGTFDCGAAPAK*
Ga0070658_109505921	3300005327	Corn Rhizosphere	MAVLVTGPSMAVPMTTGSTPATIAVMIQHIVLTALVAASLAATATIQKPKARTVTGGVCRLAADGTLGGNFGPNASLPTLAWTIGPGAAMASQLHANVAKYAGPGSYANEIIAVYLGKTALEDSYLGLGTIVIAPDGKSGTFALNDKSASGTFDCGAVPARP*
Ga0070708_1021013101	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MIRYALIALAVAPLAAPQPTATIQKPKAQTVTGGICRITDDGSTLGVNIGPNAAMPTLALTVGPRAAMADEMHANKAKFAGPGKYANELMALYLGKTALEDSYLGLGTVTIAADGKSGTFALNDGKAAGAF
Ga0070681_107727822	3300005458	Corn Rhizosphere	MRYVILAIIVAAASGPQPTASIQKPKAQTVTGGMCRLKADGTLGVNIGPNAAMPTLALTIGPGAFMADQLHANKAKFTGAGKYANEIVAVYLGKTATEDSYIGLGTVTIAADGKSGTFQLNDGKASGTFDCGTAPQP*
Ga0070681_110040262	3300005458	Corn Rhizosphere	QKPRPQTVSGGQCRLTDDGSTLGVNVGPNAAMPALALTIGPRAAMADALHANTAKFTGPGKYANEIMALYLGKTALEDSYIGLGTVTIAADGRSGTFALNDGKAAGTFDCGAPPSK*
Ga0070707_1000527844	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VESFLADLASEGTAELRRITPEYNRGMIRYALIALAVAPLAAPQPTATIQKPKAQTVTGGICRITDDGSTLGVNIGPNAAMPTLALTVGPRAAMADEMHANKAKFAGPGKYANELMALYLGKTALEDSYLGLGTVTIAADGKSGTFALNDGKAAGAFDCGAPPAK*
Ga0070741_1000312928	3300005529	Surface Soil	VTVLTAGLWLLGASLALAAPPTATIQKPKALTVSGGQCRIKDDGTLGVNVGPNPSMPTLALTIGPGAFMAKEMHANLAKFAGAGRYQNEIVALYLGKTALEDAYMGLGTVTINADGKSGSFALNDGKAAGTFDCGAPPAK*
Ga0070741_100041927	3300005529	Surface Soil	MTPLLLFAALAAAQPTATITKPKPVTVTGGQCRVKDDGTLGVNVGPNAAMPTLALTIGPGAFMAKEMKANLAKFTGPGTYQNEIIAVYLGKTALEDAYMGLGTVTINADTKSGRFALNDGKAAGTFDCGAPPAK*
Ga0070679_1004500193	3300005530	Corn Rhizosphere	MTRYALIAAVLAVVAPLSAAGPTATIHKPRPQTVTGGQCRLTDDGSTLGVNVGPNPAMPALALTIGPRAAMADALHANTAKFTGPGKYANEIMALYLGKTALEDSYIGLGTVTIAADGRSGTFALNDGKAAG
Ga0070738_100118613	3300005531	Surface Soil	MLRYAILTAAAAALASAAQPTATIQKPKTLTVTGGGCQLKADGTLGVNIGPNPALPTLALTIGPGAFAADQMHANKAKFTGPGKYANEIIAVYLGKTALEDNYIGLGTVTVAADGKSGAFALNDGKAAGTFDCGAAPAKQ*
Ga0070738_101629402	3300005531	Surface Soil	TAAAAALASAAQPTATIQKPKTLTVTGGGCQLKADGTLGVNIGPNPALPTLALTIGPGAFAADQMHANKAKFTGPGKYANEIIAVYLGKTALEDNYIGLGTVTVAADGKSGTFALNDGKAAGTFDCGAAPAKQ*
Ga0070739_100091288	3300005532	Surface Soil	MLRYAILTAAAAALASAAQPTATIQKPKTLTVTGGGCQLKADGTLGVNIGPNPALPTLALTIGPGAFAADQMHANKAKFTGPGKYANEIIAVYLGKTALEDNYIGLGTVTVAADGKSGTFALNDGKAAGTFDCGAAPAKQ*
Ga0070734_1000063044	3300005533	Surface Soil	MLRYALLTAVATALAWAAQPTATIQKPKVLSVTGGRCLLKDDGTLGVNIGPNATMPAVALTIGPGAFMADQLHANRARFTGPGKYVNEIIALYLGKTALEDSYIGLGTVTVAADNKSGTFALNDGKAAGTFDCGAVPAQP*
Ga0070734_100408065	3300005533	Surface Soil	MLLILRREILLVAAVLLLAPLAGAQAKATIQKPKTLTVTGGRCLLKADGTLGVNIGPNAAMPTLAFTVGPGAFMADQLHANKAKFAGPGKYANEIIAAYLGKTAMEDSYMGLGTVTVAADGRSGTFALNDGKAAGTFDCSAAPAKP*
Ga0070697_1001928042	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAIMIRYALLAALAAAQPFATLQKPRTQTVTGGICRLTDDGSTLGVNIGPNPAMPAVALTVGPRSAMADAMHANTAKFAGPGKYVNEIIALYLGKTALEDSYAGLGIVTIAADGKSGSFALNDGKAAGTFDCGAPPHK*
Ga0070686_1002502103	3300005544	Switchgrass Rhizosphere	MVRYLLIAAAVAPLAAATPTATIQKPKAQTVTGGICRLTDDGSTLGVNIGPNAKMPTLALTIGPRSAMAEALHANMAKFAGPGKYANEIVALYLGKTALEDSYMGLGTVTIAADAKSGTFALNDGKASGTFDCGAAPAK*
Ga0070693_1005190362	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MITHALLALAALAAAQPTVAIQKPTRQNASGGICRISADGTTLGVNIGPNSALPVLALTVGPGAAMADALHANKAKFAGPGRYQNEIVAVYLGKTALEDSYLGLGTVTIAADGKSGTFVLNDGKASGTFDCAAPPSK*
Ga0068855_1009258652	3300005563	Corn Rhizosphere	MIRAVLIAVAVAVVPLAATPPTATIQKPKAQTVSGGICRLTTDGTTLGVNIGPNAALPAVALTIGPGSAMADQMHANKAAFAGAGRYANEIIALYLGKTALDDSYMGLGTVTIAADGKSGSFALNDGKAAGTFDCGAPPSK*
Ga0066905_1018819542	3300005713	Tropical Forest Soil	MIRLLLMAFIAAAAAPTATIQKPKARTVTGGMCRISENGILGVNIGPNAALPTLALTVGPSPMADSMHANRAKFTGPGKYANEMITLYLGKTALEDSYYGLGTVVVSADGKSGTFAFNDGKASGTFDCGAPPAK*
Ga0066903_1013672943	3300005764	Tropical Forest Soil	MQMTLVWAAAVAFAAAQPTATIQKPQQQSVSGGMCRLAPDGTLGVNVGPNPALPVLALTIGPGSAMADLMHANKTKFAGPGKYADEIIAVYLGKTALEDAYAGLGTVVVAADGKSGTFALNDGKASGTFDCGAAVKP*
Ga0066903_1020424981	3300005764	Tropical Forest Soil	MVTLVLLLVMAVSAPQPSVTIEKPRSLKATGGTCRIHDDGTLGVNIGPNAALPTLALTIGPGAAMAEVMHANKAKFTGPGKYTNEMIALYLGRTALEDAHIGLGTVTIAADGKSGKFALNDGTASGSFDCGAPPLK*
Ga0070717_105484093	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AAPPTATIQKPKAQTVSGGVCRISGDGSTLGVNIGPNPALPAVALTIGPGSAMADQLHANKAKFTGAGKYDNEIIALYLGKTALEDSYIGLGTVTIAADGKSGSFALNDGKASGTFDCGAPPSR*
Ga0066652_1010089762	3300006046	Soil	MMSGSLTSGEALPRRYNRRMIPLILLSLAALYAQTPPTAAVQKPKPLAVSGGTCRLTADGSTLGVNIGPNPSLPTVALTIGPRAGMADQLHANTAKFAGPGKYSNEIIALYLGKTALVDSYVGLGTVTIAAGGKSGSFALNDGTAAGTFDCGAPPSK*
Ga0070715_105735852	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	ATIQKPKAQTVTGGICRITDDGSTLGVNIGPNAAMPTLALTVGPRAAMADEMHANKAKFAGPGKYANELMALYLGKTALADSYLGLGTVTIAADGKSGTFALNDGKAAGAFDCGAPPAK*
Ga0079220_118665122	3300006806	Agricultural Soil	MKTLALAAALAAAQPTATIQKPKSVTVNGGICRQAANGVLGVNIGPNAAMPTVALTVGPSPMADAMHANKAPFAGAGKYANEIIAVYLGKTPLEDAYAGLGTVTINADGKSGAFSLNDGKAAGTFDCGA
Ga0075425_1000022928	3300006854	Populus Rhizosphere	MVERDVARPGGGLRASTIPMMVRYLLIAVLVAPLVAATPTATIQKPKPQTVTGGICRLTDDGGTLGVNIGPNEKMRTLALTIGPGNPMADAVHANKAKFTGAGKYANEVIALYLGKTALEDSYLGLGTVTIAADGKSGTFALNDGTAAGTFDCGAPPAK*
Ga0075426_100997163	3300006903	Populus Rhizosphere	MAIMIRYALLAALAAAQPFATIQKPRTQTVTGGICRLTDDGSTLGVNIGPNPAMPAVALTVGPRSAMADAMHANTAKFAGPGKYVNEIIALYLGKTALEDSYAGLGIVTIAADGKSGSFALNDGKAAGTFDCGAAPHK*
Ga0075426_111685581	3300006903	Populus Rhizosphere	MMTAGCWVLAATVALAAAPPTATIQKPTPLTLSGGVCRIQNDGTLGVNIGPNSPTPKFTLSIGPGDFMAQQMHANLAKFSGPGKYPNVAMAVYVGKTATEDYMGLGTVTINADGKSGTFALNDGKASGSFDCGQLAK*
Ga0079219_100772252	3300006954	Agricultural Soil	MVERNVVRSSIGPRASTIAPMVRYLAIAVTVAPLAAATPTATIQKPKAQTVTGGTCRLTDDGSTLGVNIGPNAALPTVAVTIGPRSAMADALHANTTKFAGAGKYANEIIALYLGKTALEDSYMGLGTVTIAADG
Ga0079219_124935991	3300006954	Agricultural Soil	RHGTFVAMHTLLMSTLLALAAPQPTATIQKPKLQTVTGGICRVKADGTLGVNIGPNAAMPTVALTVGPGAFMADELHANKTRFTGPGTYANEIVAVYLGKTALEDSYLGLGTVTIAADGKSGSFALNDGTASGTFDCGAPPKP*
Ga0075435_1000012349	3300007076	Populus Rhizosphere	MVERDVARPGGGLRASTIPMMVRYLLIAVLVAPLVAATPTATIQKPKPQTVTGGICRLTDDGGTLGVSIGPNEKMRTLALTIGPGNPMADAVHANKAKFTGAGKYANEVIALYLGKTALEDSYLGLGTVTIAADGKSGTFALNDGTAAGTFDCGAPPAK*
Ga0105240_100066332	3300009093	Corn Rhizosphere	MRYVILAIIVAAASGSQPTASIQKPKAQTVTGGMCRLKADGTLGVNIGPNAAMPTLALTIGPGAFMADQLHANKAKFTGAGKYANEIVAVYLGKTATEDSYIGLGTVTIAADGKSGTFQLNDGKASGTFDCGTAPQP*
Ga0105245_100705284	3300009098	Miscanthus Rhizosphere	MAIMIQYALMAVAAALLAAAQPTASIQKPRPQTVTGGICRITDDGSTLGVNIGPNAAMPALALTVGPRAAMADQMHANKAKFLGPGKYDNELMALYLGKTALEDSYLGLGTVTIAADGKSGSFALNDGKAAGTFDCGAPPSK*
Ga0126373_100502054	3300010048	Tropical Forest Soil	MPLILRREILVAAAFLLVGPCAEAQAKVTIQKPRAVTATGGRCLLKADGTLGVNIGPNAAMPTLALTVGPGAFMADQMHANKAKFAGPGKYENEIVAVYLGKTALEDSYMGLGTVTVAADGKSGTFALNDGKAAGNFDCGAAPAKP*
Ga0126373_101421661	3300010048	Tropical Forest Soil	GGREPMLLSLRREILVAGAFLLATPLASAQATVTIQKPTAVTATGGHCQLRADGTLGVNIGPNASMPMLALTIGPGAFMADQMHANKAKFAGPGKYDNEIVAVYLGKTALEDSYMGLGTVTVAADGKSGTFALNDGKAAGSFDCGVAPAKP*
Ga0126373_103538082	3300010048	Tropical Forest Soil	MPLVLRRKILLSAAVLLLAPLARAQAKATIQKPKAITVTSGRCLLKADGTLGVNIGPNPTMPTLAFTIGPGAFMADQMHANKAIFAGTGKYDNEIIAVYLGKTATEDSYMGLGTVTVAADGKSGTFSLNDGKAAGTFDCGAAPAKR*
Ga0126373_120214941	3300010048	Tropical Forest Soil	MLRYALISAVAGALAWSAQPTATIQKPKVLTVASGRCLIKADGTLGVNIGPNAAMPTLALTIGPGAFMADQLHANKAKFTGPGKYVNEIIALYLGKTALEDSYIGLGTVTVAADSKSGTFALNDGKAAGTFDCGEPAKP*
Ga0126378_106721691	3300010361	Tropical Forest Soil	MGLILRREILVAAGLFLVADLAGAQAKVTIQKPRAVTASGGRCALKADGTLGVNIGPNAAMPTLALTIGPGSFMTDTMHANKAKFAGPGKYENEIVAVYLGKTALEDSYIGLGTVTVAADGKSGTFVLNDGKAAGSWDCGAAPAKP*
Ga0126378_115828241	3300010361	Tropical Forest Soil	KPRAVTATGGRCLLKADGTLGVNIGPNAAMPTLALTVGPGAFMADQMHANKAKFAGPGKYENEIVAVYLGKTALEDSYMGLGTVTVAADGKSGTFALNDGKAAGNFDCGAAPAKP*
Ga0126379_100765161	3300010366	Tropical Forest Soil	MLAVVTLVSFLAAGQPSATISKPKPVSVSGGICRLTDDGTTLGVNVGPNVAMPTLALTIGPKAAMANALHANTAKFAGPGIYKNEIVAVYLGRTALDNSYIGLGTVTIGADGKSGTFALNDGKAAGTFDCHTLVK*
Ga0126381_1000768334	3300010376	Tropical Forest Soil	MPLILQREILVAAALVLVAPVARAQAKVTIQKPKIVTATGGRCLLKADGTLGVNIGPNVAMPTLAFTIGPGAFMADQMHANKAKFVGPGKYDNEIVAVYLGRTALEDSYMGLGTVTVAADGKSGTFALNDGKAAGSFDCGVAPAKP*
Ga0126381_1001973652	3300010376	Tropical Forest Soil	MLLSLRREILVAGAFLLATPLASAQATVTIQKPKAVTATGGHCQLRADGTLGVNIGPNASMPMLALTIGPGAFMADQMHANKAKFAGPGKYDNEIVAVYLGKKALEDSYMGLGTVTVAADGKSGTFALNDGKAAGSWDCGVAPAKP*
Ga0126381_1006945283	3300010376	Tropical Forest Soil	MNILALLAALASAQPTATIMKPKSITVSGGQCRIKDDGTLGVNVGPNAAMPTLALTIGPGAFMAKDMHANLAKFTGPGKYQNELMALYLGKTATEDVYMGLGTVTINADGKSGSFALNDGKGAGTFDCGAAPAK*
Ga0134126_104775482	3300010396	Terrestrial Soil	MVAHLAGAQAKVTIQKPRAVTATGGRCALKADGTLGVNIGPNAAMPTLALTIGPGAFMADTMHANKAKFAGPGKYDNEIIAVYLGKTALEDSYMGLGAVTVAADGKSGTFALNDGKAAGSFDCGAAPAKP*
Ga0134124_132104621	3300010397	Terrestrial Soil	MITHALLALAALAAAQPTVAIQKPTRQNASGGICRISADGTTLGVNIGPNSALPVLALTVGPGAAMADALHANKAKFAGPGRYQNEIVAVYLGKTALEDSYLGLGTVTIAADGKSGTF
Ga0150985_1115434522	3300012212	Avena Fatua Rhizosphere	MVRCVLIAVAVVPLLVAPTATIQKPKAQTVSGGSCRISGDGTTLGVNIGPNPALPAVALTIGPGSAMADQMHANKGKFSGAGKYANEIIALYLGKTALEDSYMGLGTVTIAADGKSGSFALNDGKAAGTFDCGASPAR*
Ga0150984_1186684071	3300012469	Avena Fatua Rhizosphere	MVRCALIAVAVVPLLVAPTATIQKPKAQTVSGGSCRISGDGTTLGVNIGPNPALPAVALTIGPGSAMADQMHANKGKFSGAGKYANEIIALYLGKTALEDSYMGLGTVTIAADGKSGSFALNDGKAAGTFDCGASPAR*
Ga0126369_117798581	3300012971	Tropical Forest Soil	MAPGGYNTVMLRYALIAAAGALASPAPPSQPIQKPKTLTVTGGRCQMKADGTLGVNIGPNAAMPTLAFTIGPGAAMADEMHANKAKFTGPGKYANEIIALYLGKTALQDSYIGLGTVTVAADNKSGTFALNDGKAAGAFDCGAAPAKP*
Ga0163162_114965801	3300013306	Switchgrass Rhizosphere	MVRYLLIAAAVAPLAAATPTATIQKPKAQTVTGGICRLTDDGSTLGVNIGPNAKMPTLALTIGPRSAMAEALHANMAKFAGPGKYANEIVALYLGKTALEDSYMGLGTVTIAADAKSGTFALNDGKASGTFDCGAA
Ga0157376_123604191	3300014969	Miscanthus Rhizosphere	TEPMSLILRKEFLLAGAFLLLPSPVQAQAKATIQKPKTLAVTVGRCQLKADGTLGVNIGPNATMPTLAFTVGPGAFMADQMHANKAKFAGPGKYVNEIVAVYLGKTALEDSYIGLGTVSVAADGRSGTFALNDGKALGSFDCGAAPEKP*
Ga0132258_109346382	3300015371	Arabidopsis Rhizosphere	MVRCLLIAAAVALLAAATPTATIQKPKAQTVTGGICRLTDDGSTLGVNIGPNATMPTLALTIGPRSAMADALHANTAKFAGPGKYANEIVALYLGKTALEDSYMGLGTVTIAADGKSGSFALNDGKAAGTFDCGAPPAK*
Ga0182035_102135052	3300016341	Soil	MQFVAALLLLATAPQPAANITKPKPRVVSGGGCRITGDGTTLGVNIGPNSAMPTVALTIGPKSAMADAMHANMAKFAGPGTYKNEIVAVYLGKTALEDSYIGLGTVTVAADGKSGSFALNDGKSAGTFDCGTAPSK
Ga0182035_110490302	3300016341	Soil	VQKPKTQTVTGGRCRLAPDGTLGVNVGPNPALPVVALTIGPGSAMADLMHANKAKFAGPGKYANEVVAVYLGKTALEDAYAGLGTVVVAADGKSGTFALNDGKASGTFDCGAAPEKP
Ga0210403_103951522	3300020580	Soil	MAQIQGLAATARPWQNGIRAITITVMLRYALITAAVATLATSAQPTATIQKPKELTVTGGRCQLKADGTLGVNIGPNASMPTLALTIGPGTFMADQLHANKGKFTGPGKYANEVIAVYLGKTALQDSYIGLGTVTVAADNKSGTFALNDGKAAGSFDCGAAPAKP
Ga0210387_112260181	3300021405	Soil	MLLILRREILLAASFLLVAPLAGAQAKVTIQKPKMLTATGGHCLLKADGTLGVNIGPNAAMPTLALTIGPGAFMADQMHANKAKFAGPGKYDNEIVAVYLGKTALEDSYMGLGIVTVAADGKSGTFALNDGNAAGSFDCGAAPVKP
Ga0126371_100264422	3300021560	Tropical Forest Soil	MGLILRREILVAAGLFLVADLAGAQAKVTIQKPRAVTASGGRCALKADGTLGVNIGPNAAMPTLALTIGPGSFMTDTMHANKAKFAGPGKYENEIVAVYLGKTALEDSYIGLGTVTVAADGKSGTFALNDGKAAGSWDCGAAPARP
Ga0126371_101797532	3300021560	Tropical Forest Soil	MPLILRREILVAAAFLLVGPCAEAQAKVTIQKPRAVTATGGRCLLKADGTLGVNIGPNAAMPTLALTVGPGAFMADQMHANKAKFAGPGKYENEIVAVYLGKTALEDSYMGLGTVTVAADGKSGTFALNDGKAAGNFDCGAAPAKP
Ga0126371_111499082	3300021560	Tropical Forest Soil	MMVGGAMTVRGAMCVVLGAASVAYAAAQPTATITKPKSVTVSGGQCRIKDDGTLGVNVGPNAAMPTLALTIGPGAFMAKDMHANLAKFTGPGKYQNELMALYLGKTATEDVYMGLGTVTINADGKSGSFALNDGKGAGTFDCGAAPAK
Ga0126371_114704632	3300021560	Tropical Forest Soil	MPLILQREILVAAALVLVAPVARAQAKVTIQKPKIVTATGGRCLLKADGTLGVNIGPNVAMPTLAFTIGPGAFMADQMHANKAKFVGPGKYDNEIVAVYLGRTALEDSYMGLGTVTVAADGKSGTFALNDGKAAGSFDCGVAPAKP
Ga0126371_138054201	3300021560	Tropical Forest Soil	MPLVLRNEILLAAAVLLLVPLARAQAKATIQKPKTLTVTGGRCLLKADGTLGVNIGPNATMPTLAFTIGPGAFMADQMHANKAKFSGSGTYANEIVAVYLGKTATEDSYMGLGTVTVAADGKSGTFALNDGKAAGTFDCGAAPAKP
Ga0207685_104244401	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	AAQPTATIQKPKAQTVTGGICRITDDGSTLGVNIGPNAAMPTLALTVGPRAAMADEMHANKAKFAGPGKYANELMALYLGKTALADSYLGLGTVTIAADGKSGTFALNDGKAAGAFDCGAPPAK
Ga0207705_102145932	3300025909	Corn Rhizosphere	MAVLVTGPSMAVPMTTGSTPATIAVMIQHIVLTALVAASLAATATIQKPKARTVTGGVCRLAADGTLGGNFGPNASLPTLAWTIGPGAAMASQLHANVAKYAGPGSYANEIIAVYLGKTALEDSYLGLGTIVIAPDGKSGTFALNDKSASGTFDCGAVPARP
Ga0207695_100481535	3300025913	Corn Rhizosphere	MRYVILAIIVAAASGSQPTASIQKPKAQTVTGGMCRLKADGTLGVNIGPNAAMPTLALTIGPGAFMADQLHANKAKFTGAGKYANEIVAVYLGKTATEDSYIGLGTVTIAADGKSGTFQLNDGKASGTFDCGTAPQP
Ga0207652_100277172	3300025921	Corn Rhizosphere	MTRYALIAAVLAVVAPLSAAGPTATIHKPRPQTVTGGQCRLTDDGSTLGVNVGPNPAMPALALTIGPRAAMADALHANTAKFTGPGKYANEIMALYLGKTALEDSYIGLGTVTIAADGRSGTFALNDDKAAGTFDCGAPPSK
Ga0207646_101513424	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MIRYALIALAVAPLAAPQPTATIQKPKAQTVTGGICRITDDGSTLGVNIGPNAAMPTLALTVGPRAAMADEMHANKAKFAGPGKYANELMALYLGKTALEDSYLGLGTVTIAADGKSGTFALNDGKAAGAFDCGAPPAK
Ga0207681_108793432	3300025923	Switchgrass Rhizosphere	MVRYLLIAAAVAPLAAATPTATIQKPKAQTVTGGICRLTDDGSTLGVNIGPNAKMPTLALTIGPRSAMADALHANMAKFAGPGKYANEIVALYLGKTALEDSYMGLGTVTIAADAKSGTFALNDGKASGTFDCGAAPAK
Ga0207694_115922021	3300025924	Corn Rhizosphere	TATIQKPKAQTVTGGICRLTADGSTLGVNIGPNAAMPALALTVGPRAAMADALHANTAKFAGPGKYANEIMALYIGKTALEDSYMGLGTVTIAADGKSGSFALNDGKAAGTFDCGAPPAK
Ga0207687_101334402	3300025927	Miscanthus Rhizosphere	MAIMIQYALMAVAAALLAAAQPTASIQKPRPQTVTGGICRITDDGSTLGVNIGPNAAMPALALTVGPRAAMADQMHANKAKFLGPGKYDNELMALYLGKTALEDSYLGLGTVTIAADGKSGSFALNDGKAAGTFDCGAPPSK
Ga0207665_104403783	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MAIMIRYALLAALAAAQPFATLQKPRTQTVTGGICRLADDGSTLGVNIGPNPAMPAVALTVGPRSAMADAMHANTAKFAGPGKYVNEIIALYLGKTALEDSYAGLGIVTIAADGKSGSFALNDGKAAGTFDCGAAPHK
Ga0207667_118678281	3300025949	Corn Rhizosphere	MIRAVLIAVAVAVVPLAATPPTATIQKPKAQTVSGGICRLTTDGTTLGVNIGPNAALPAVALTIGPGSAMADQMHANKAAFAGAGRYANEIIALYLGKTALDDSYMGLGTVTIAADGKSGSFALNDGKAAGTFDCGAPPSK
Ga0207651_113937231	3300025960	Switchgrass Rhizosphere	MVRYLLIAVAVAPLAAATPTATIQKPKAQTVTGGICRLTDDGNTLGVNIGPNEKMRTLALTIGPGNPMADAVHANTAKFTGAGKYANEIIALYLGKTALEDSYLGLGTVTIAADGKSGTFALNDGTAAGTFDCGAPPAK
Ga0207640_101810992	3300025981	Corn Rhizosphere	MVRYLLIAAAVAPLAAATPTATIQKPKAQTVTGGICRLTDDGSTLGVNIGPNAKMPTLALTIGPRSAMAEALHANMAKFAGPGKYANEIVALYLGKTALEDSYMGLGTVTIAADAKSGTFALNDGKASGTFDCGAAPAK
Ga0207639_105648871	3300026041	Corn Rhizosphere	MVRYLLIAAAVAPLAAATPTATIQKPKAQTVTGGICRLTDDGSTLGVNIGPNAKMPTLALTIGPRSAMADALHANMAKFAGPGKYANEIMALYLGKTPLEDSYMGLGTVTIAADGKSGSFALNDGKAAGTFDCGAPPAK
Ga0207698_109482032	3300026142	Corn Rhizosphere	AQTVTGGICRLTADGSTLGVNIGPNAAMPALALTVGPRAAMADALHANTAKFAGPGKYANEIMALYLGKTPLEDSYMGLGTVTIAADGKSGSFALNDGKAAGTFDCGAPPAK
Ga0209581_10052894	3300027706	Surface Soil	MLRYAILTAAAAALASAAQPTATIQKPKTLTVTGGGCQLKADGTLGVNIGPNPALPTLALTIGPGAFAADQMHANKAKFTGPGKYANEIIAVYLGKTALEDNYIGLGTVTVAADGKSGAFALNDGKAAGTFDCGAAPAKQ
Ga0209810_10624582	3300027773	Surface Soil	MLRYAILTAAAAALASAAQPTATIQKPKTLTVTGGGCQLKADGTLGVNIGPNPALPTLALTIGPGAFAADQMHANKAKFTGPGKYANEIIAVYLGKTALEDNYIGLGTVTVAADGKSGTFALNDGKAAGTFDCGAAPAKQ
Ga0209177_104261351	3300027775	Agricultural Soil	IGPRASTIAPMVRYLAIAVTVAPLAAATPTATIQKPKAQTVTGGTCRLTDDGSTLGVNIGPNAALPTVAVTIGPRSAMADALHANTTKFAGAGKYANEIIALYLGKTALEDSYMGLGTVTIAADGKSGTFALNDGKAAGTFDCGAPPAK
Ga0209112_100029962	3300027817	Forest Soil	MPLIMRREILLAGAFLLVAPLAGAQAKVTIQTPKPVTAMGGRCALKADGTLGVNIGPNAAMPTLALTIGPGAFMADQMHANKSKFAGPGKYDNEIVAVYLGKTALEDSYMGLGTVTVAADGKSGTFALNDGKAAGSFDCGAAPAKQ
Ga0209060_100065466	3300027826	Surface Soil	MLRYALLTAVATALAWAAQPTATIQKPKVLSVTGGRCLLKDDGTLGVNIGPNATMPAVALTIGPGAFMADQLHANRARFTGPGKYVNEIIALYLGKTALEDSYIGLGTVTVAADNKSGTFALNDGKAAGTFDCGAVPAQP
Ga0209060_102270281	3300027826	Surface Soil	MLLILRREILLVAAVLLLAPLAGAQAKATIQKPKTLTVTGGRCLLKADGTLGVNIGPNAAMPTLAFTVGPGAFMADQLHANKAKFAGPGKYANEIIAAYLGKTAMEDSYMGLGTVTVAADGRSGTFALNDGKAAGTFDCSAAPAKP
Ga0170824_1149851543	3300031231	Forest Soil	MSLTLRKEFLLAAAFLLLPFPARAQATATIQKPKTLTVTGGRCQLNADGTLGVNIGRNATMPTLAFTVGPGAFMADQMHANKAKFAGPGKYVNEIVAVYLGKTALEDSYIGLGTVTVAADGRSGTFALNDGKALGSFDCGGAPEKP
Ga0307506_103718752	3300031366	Soil	MIRCALIAVAVAPLLAAPPTATIQKPKAQTVSGGLCRLTDDGSTLGVNIGPNAALPAVALTIGPRAAMADQLHANKAKFAGAGKYDNELIALYLGKTALEDSYLGLGTVTIAADGKSG
Ga0318516_103785172	3300031543	Soil	MRIVLLVAALAVGAAQPTATVQKPKTQTVTGGRCRLAPDGTLGVNVGPNPALPVVALTIGPGSAMADLMHANKAKFAGPGKYANEVVAVYLGKTALEDAYAGLGTVVVAADGKSGTFALNDGKASGTFDCGAAPEKP
Ga0310915_104660151	3300031573	Soil	MQFVAALLLLATAPQPAANITKPKPRVVSGGGCRITGDGTTLGVNIGPNSAMPTVALTIGPKSAMADALHANTAKFAGPGTYKNEIMAVYVGKTALEDSYIGLGTVTVAADGKSGSFALNDGKSAGTFDCGTAPSK
Ga0307476_106650601	3300031715	Hardwood Forest Soil	MPLLLRREILLAAAVLLLASLAGAQAKATIQKPKTVTVTGGRCLLKTDGTLGVNIGPNATMPTLAFTIGPGAFMADQMRANKAKFAGPGRYANEIVAVYLGKTAMEDSYMGLGTVTVAADGRSGTFALNDGKAAGIFDCGAAPTRP
Ga0310813_103212091	3300031716	Soil	VLAGYWATCTIAMMVRCLLIAAAVAPLAAAAPTATIQKPKAQSVTGGICRLTDDGSTLGVNIGPDATMPTLALTIGPRSAMADALHANTAKFAGPGKDANEIVALYLGKTALEDSYMGLGTVTIAADGKSGSFALNDGKAAGTFDCGAQPAK
Ga0310813_108812382	3300031716	Soil	MMVRYLLIAAAVAPLAAATPTATIQKPKAQTVTGGVCRLTDDGSTLGVNVGGDRTMPTLALTIGPRSAMADALHANTATFTGAGKCANEIIALYLGKTALEDSYMGLGTVTIATDGKSGTFALNDGKAAGAFDCGAPPAK
Ga0307469_102737681	3300031720	Hardwood Forest Soil	MTRYLLVAAAVAPLAAANPTATIQKPKAQTVNGGICRLTPDGTTLGVNIGPNASMPTLALTIGPRSAMAEPLHANTAKFTGAGKYANEIVAVYLGKTALEDSYMGLGTVTIAADGKSGSFALNDGTAAGTFDCGAPPVK
Ga0307473_100117704	3300031820	Hardwood Forest Soil	VESFLADLASEGTAELRRITPEYNRGMIRYALIALAVAPLAAPQPTATIQKPKAQTVTGGICRITDDGSTLGVNIGPNAAMPTLALTVGPRAAMADEMHANKAKFAGPGKYANELMALYLGKTALEDSYLGLGTVTIAADGKSGTFALNDGKAAGAFDCGAPPAK
Ga0306925_104634742	3300031890	Soil	MLLVLRREILLVAAVFLLVPLAGAQAKATIQRPKTLTVTGGRCLLKADGTLGINIGPNAAMPTLAFTIGPGAFMADQMHANKAKFAGPGKYVNEIVALYLGKTALEDHYIGLGTVTVAADGRSGTFALNDGKAAGTFDCGAAPATP
Ga0306925_105046372	3300031890	Soil	QPTANITKPKPRVVSGGGCRITGDGTTLGVNIGPNSAMPTVALTIGPKSAMADALHANTAKFAGPGTYKNEIMAVYLGKTALEDSYIGLGTVTVAADGKSGSFALNDGKSAGTFDCGTAPSK
Ga0306925_114471532	3300031890	Soil	MRIVLLVAALAVGAAQPTATVQKPKTQTVTGGRCRLAPDGTLGVNVGPNPALPVVALTIGPGSAMADLMHANKAKFAGPGKYANEVVAVYLGKTALEDAYAGLGTVVVAADGKSGTFALNDGKASGTFDCGA
Ga0306921_122489961	3300031912	Soil	QRPKTLTVTGGRCLLKADGTLGINIGPNAAMPTLAFTIGPGAFMADQMHANKAKFAGPGKYVNEIVALYLGKTALEDHYIGLGTVTVAADGRSGTFALNDGKAAGTFDCGAAPATP
Ga0310912_111956741	3300031941	Soil	MQFVAALLLLATAPQPAANITKPRPRVVSGGGCRITGDGTTLGVNIGPNSAMPTVALTIGPKSAMADAMHANMAKFAGPGTYKNEIVAVYLGKTALEDSYIGLGTVTVAADGKSGSFALNDGKSAGTFDCGTAPSK
Ga0310916_106617521	3300031942	Soil	REMLLVAAVLLLVPLAGAQAKATIQKPKSLTVTGGRCLLKADGTLGINIGPNAAMPTLAFTIGPGAFMADQMHANKAKFAGPGKYVNEIVALYLGKTALEDHYIGLGTVTVAADGRSGTFALNDGKAAGTFDCGAAPATP
Ga0306924_106398572	3300032076	Soil	VCEAKSNVFTVQRKIEKMLTIAALFSLAAALQPTANITKPKPRVVSGGGCRITGDGTTLGVNIGPNSAMPTVALTIGPKSAMADALHANTAKFAGPGTYKNEIMAVYVGKTALEDSYIGLGTVTVAADGKSGSFALNDGKSAGTFDCGTAPSK
Ga0306924_111192631	3300032076	Soil	MQFVAALLLLATAPQPAANITKPKPRVVSGGGCRITGDGTTLGVNIGPNSAMPTVALTIGPKSAMADAMHANMAKFAGPATYKNEIVAVYLGKTALEDSYIGLGTVTVAADGKSGSFALNDGK
Ga0307472_1022411752	3300032205	Hardwood Forest Soil	KAQTVNGGICRLTPDGTTLGVNIGPNASMPTLALTIGPRSAIDEPLHAKTAKFTGAGKYANEIVAVYLGKTALEDSYMGLGTVTIAADGKSGSFALNDGTAAGTFDCGAPPVK
Ga0306920_1004845622	3300032261	Soil	MQFVAALLLLATAPQPAANITKPKPRVVSGGGCRITGDGTTLGVNIGPNSAMPTVALTIGPKSAMADAMHANMAKFAGPATYKNEIVAVYLGKTALEDSYIGLGTVTVAADGKSGSFALNDGKSAGTFDCGTAPSK
Ga0306920_1006884352	3300032261	Soil	MLTIAALFSLAAALQPTANITKPKPRVVSGGGCRITGDGTTLGVNIGPNSAMPTVALTIGPKSAMADALHANTAKFAGPGTYKNEIMAVYVGKTALEDSYIGLGTVTVAADGKSGSFALNDGKSAGTFDCGTAPSK
Ga0335083_108767141	3300032954	Soil	MPLRLQRAILLSAVAFVLLPMAEAQAKATIQKPRTLTVTGGRCLLKADGTLGVNIGPNAAVPTLAFTVGPGAFMADQMHANKAKFAGPGKYADEIIAVYLGKTALEDSYIGLGTVTVGDDGKSGSFALNDGKAAGTFDCGSAPEKP
Ga0335084_114907542	3300033004	Soil	MNSLVLLAALAAAQPTATITKPKSITVTGGVCRVKDDGTLGVNIGPNASMPTLALTVGPGAFMAKEMHANLAKFAGPGTYQHEVMALYLGKTALEDAYMGLGSVTIHADGKSGSFALNDGKAAGTFD
Ga0310810_107361821	3300033412	Soil	VLAGYWATCTIAMMVRCLLIAAAVAPLAAAAPTATIQKPKAQSVTGGICRLTDDGSTLGVNIGPDATMPTLALTIGPRSAMADALHANTAKFAGPGKYANEIVALYLGKTALEDSYMGLGTVTIAADGKSGSFAL
Ga0373948_0001218_923_1342	3300034817	Rhizosphere Soil	MVRYLLIAGVVAQLAAATPTATIQKPKAQTVTGGVCRLTGDGSTLGVNIGPNEKMRTLALTIGPGNPMADAVHANMAKFTGAGKYANEIIALYLGKTALEDSYLGLGTVTIAADGKSGTFALNDGTAAGTFDCGAPPAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087801

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences