NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F087858

Metagenome / Metatranscriptome Family F087858

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F087858
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 73 residues
Representative Sequence MDMKDVLNHVREELREQPDSHFSEIYFRTVKHGASGTEVGEALTEILKRDEVRIKDGKWRLIAPVERRRSA
Number of Associated Samples 79
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 74.55 %
% of genes near scaffold ends (potentially truncated) 24.55 %
% of genes from short scaffolds (< 2000 bps) 67.27 %
Associated GOLD sequencing projects 71
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (54.545 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil
(13.636 % of family members)
Environment Ontology (ENVO) Unclassified
(37.273 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(72.727 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.37%    β-sheet: 10.10%    Coil/Unstructured: 52.53%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070MDMKDVLNHVREELREQPDSHFSEIYFRTVKHGASGTEVGEALTEILKRDEVRIKDGKWRLIAPVERRRSASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.70
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
45.5%54.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Peatland
Bog
Peatland
Soil
Peatlands Soil
Soil
Forest Soil
Untreated Peat Soil
Fen
Bog
Soil
Palsa
Permafrost
Forest Soil
Soil
Soil
Fen
Palsa
Bog
Peat Soil
Rhizosphere
4.5%9.1%10.0%4.5%13.6%3.6%13.6%7.3%10.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12631J13338_1000735103300001131Forest SoilMDMTNVMNHVREELREQPDINFSEIYFRSVERGVSSAEVRGALVEMLNRNEIRIKDGKWRLASSVERRKSA*
JGI12631J13338_100121513300001131Forest SoilMDIRDVVNHIREELREQPDINFSEIYFRTVEHGVSSADVRAALVEMLNQDAIRIKDGKWRLATRLERRKSA*
JGI12704J13340_100919113300001170Forest SoilMDMTNVMNHVREELREQPDINFSEIYFRSVERGVSSAEVRGALVEMLNRNEIRIKDGKWRLASSVERR
JGI12659J15293_1000409143300001546Forest SoilMDMKDVMNQVRKELREQPGSRFSEIYLRTVERGASGANVRHALTEMLKRDEVRINEGKWRLIAPMERRKSASPTFH*
JGI12635J15846_1004864863300001593Forest SoilMLRVEERSSVSMDMKDVMNHIRKELREQPGSRFSEIYLRTVEHGASGANVREALTEMLKRDEIRINEGQWRLIAPVERRKSA*
Ga0058882_156902623300004121Forest SoilMDIKDVVNHIREELREQPDINFSEIYFRTVEHGVSSADVRAALVEMLNQDEIRIKDGKWRLATRVERRKSA*
Ga0068977_124018033300004468Peatlands SoilMDVKDVMNHVREGLREQPDSHFSEIYFRTVEHGANSADVFEALAEMLKRDEVRIKDCKWRLIAPVERRKSA*
Ga0070761_1029372013300005591SoilMDMTDVMNHVREELREQPDVNFSEIYFRSVEHGLSSAEVRGALVEMLNRNEISIKDGKWRLASSVERRKSA*
Ga0070761_1042800223300005591SoilMDIKDVVNHIREELREQPDINFSEIYFRTVEHGVSSADVRAALVEMLNQDEIRITDGKWRLATRLERRKSA*
Ga0066787_1001864423300005950SoilMEMKDVLNHVRAELREHPDSHFSELFFRTVKHGASTSEVSEALTEILKRDEVRIKDGKWRMIAPVERRQSA*
Ga0066790_1001706233300005995SoilMDTKELMENIRADLRKRPNSHFSEIYFRSVEHGASSFSVREAPTEMLQREEVKTRDGKWRLSAPVERRKSV*
Ga0116102_106902423300009632PeatlandMDMKEIMERVRADLRDRPDSHFSEVYFRTIKHGASSALVGEALTEMMKRDEVRIKDGKWRLIAPVERRKSA*
Ga0116117_102126623300009635PeatlandMDMKDVLNHVREELREQPDSHFSEIYFRTVKHGASGTEVGEALTEILKRDEVRIKDGKWRLTAPVERRKSA*
Ga0116117_105619523300009635PeatlandMDMKDVLNHVRIDLREKPDSHFSEICFRTLKHGASGSEVGAALTEILKRDEVRIIDGKWRLIAPVARRRSA*
Ga0116135_134574213300009665PeatlandLASLKERINPMDMTNVMNHVREELREQPDINFSEIYFRSVERGVSSAEVRGALVEMLNRNEIRIKDGKWRLASSVERRKSA*
Ga0116134_1005815113300009764PeatlandMDMKDVMNQVREELRKQPDSHFSEVYLRTVEQGARGTEVRAALYEMLERDEVRIIGGKWRLIAPVERRKSA*
Ga0181538_1028668713300014162BogVSAKERGNVAMDMKDVMNQVREELRKQPDCHFSEVYLRTVERGASGTDVRVALYEMLKRDEVRIKDGKFRMIAPVERRKSA*
Ga0181531_1065596313300014169BogELREQPDSHFSEIYFRTVKHGASGTEVGEALTEILKRDEVRIKDGKWRLTAPVERRKSA*
Ga0182018_1000605043300014489PalsaMDMKDVMNHVRKELREQPGSRFSEIYLRTVERGASDANVREALTEMLKRDEVRINEGRWRLIAPVERRKSA*
Ga0182010_1000148953300014490FenMNMKDVMNQVREELRKQPDNHFSEIYFRLVEYGASGGDVRMALTEMLERDEVRIIAGKWKLISPVERRKSA*
Ga0182010_1000718423300014490FenMSVKERGYVAMDMKDVMNQVREDIRKQPDSHFSEVYLRTVERGVTATDVRAALYEMLKRDEVRIKDGKFRMIAPVERRKSA*
Ga0182010_1003898113300014490FenMDMKDVMNHVREELREQPDSYFAEIYFRTVEHGANCGDVFEALTEMLRKNEVRIKDGKWRLIAPVERRKSA*
Ga0182010_1041989423300014490FenVSAKERGYVAMDMKDVMNQVREDIRKLPGSHFSDVYLRTVERGASGGDVRAALYEMLKRDEVRIKDGKFRMIAPVERRRSA*
Ga0182014_10003110103300014491BogMVLQGRFAPPKERGKVAMDMKDVMNQVREELRRQPDSHFSEVYIRTVEHGARGTDVRVALYEMLKRDEVRVKEGKFRMIAPVERRKSA*
Ga0182014_1002628763300014491BogMDMKDVMNHVREELREQPDSYFAEICFRTGEHGANCGDVFEALTEMLRQNEVRTKDGKWRLIAPVERRKSA*
Ga0182014_1003729553300014491BogMDMKDVMNQVRKELRKQPGSHFSEVYLRTVERGASGTDVRAALYEMLKRDEVRIKDGI*
Ga0182014_1005520653300014491BogVSAKERGYVAMDMKDVMNQVREDIRKQPGSHFSDVYLRTVERGASGGDVRAALYEMLKRDEVRIKDGKFRMIAPVERRRSA*
Ga0182014_1011319613300014491BogMDMKDVMNQVREELRKQPDSHFSEVYLRTVERGASGTDVRVALYEMLKRDEVRIRDGKFRMIAPVERRKSA*
Ga0182014_1012694113300014491BogMNMKDVMNQVREELRKQPDSHFSEIYFRLVEYGASGGDVRMALTEMLERDEVRIIAGKWKLISPVERRKSA*
Ga0182013_1043302513300014492BogVSAKERGYVAMDMKDVMNQVREDIRKQPDSHFSEVYIRTVEHGARGTDVRVALYEMLKRDEVRVKEGKFRMIAPVERRKSA*
Ga0182016_10002649103300014493BogMKDTPMDMKDVLNHVREGLRERPDSHFAEIYFRTVKQGASGTEVHDALVEILKRDEVRIKDGKWRLIATVERRKSA*
Ga0182016_1034511223300014493BogMDMKDVLNHVREELREQPDSHFSEIYFRTVKHGASITEVREALVVILKRDEVRIKDGKWRLTAPVERRKSA*
Ga0182017_1000548873300014494FenMDMKDVMNQVREDIRKLPGSHFSDVYLRTVERGASGGDVRAALYEMLKRDEVRIKDGKFRMIAPVERRRSA*
Ga0182015_10008378123300014495PalsaMLRVKERSSVSMDMKDVMNHVRKELREQPGSRFSEIYLRTVERGASDANVREALTEMLKRDEVRINEGRWRLIAPVERRKSA*
Ga0182019_1089169013300014498FenMSVKERGYVAMDMKDVMNQVREDIRKQPDSHFSEVYLRTVERGVTATDVRAALYEMLKRDEVKTKGGRWRLAVQVERRRA*
Ga0182024_1294435313300014501PermafrostMLRVKERGSVSMDMKDVMNHVRKELREQPGSRFSEIYLRTVERGASGANVREALTEMLKRDEVRINEGKWRLIAPVERRKSA*
Ga0182021_1090999923300014502FenMVLQGRFASAKEMGKVVMDMKDVMNQVREELRKQPDSHFSEVYIRTVEHGARGTDVRVALYEMLKRDEVRVKEGKFRMIAPVERRKSA*
Ga0182030_1022183633300014838BogMDMKEIMEKVRADLRKLPNSRFSEVYIRTVEHGASSVEVREALTEMLKRDEVRIEDGKWRLIAPVERRKSA*
Ga0182030_1024230723300014838BogMEMKDVLNHVRQDLREQPDSHFSEIYLRTVEHGASGTEVREALAEILERDEVRINDGKWRLIAPVERRRSA*
Ga0187853_1022930313300017940PeatlandMDLKDVMNHVREDLREQPDSHFSEIYLRTVEHGAKSADVFEALTEMLKRDEVRIKDCKWRLIAPVERRKSA
Ga0187879_1001017553300017946PeatlandMDMKEIMERVRADLRDRPDSHFSEVYFRTIKHGASSALVGEALTEMMKRDEVRIKDGKWRLIAPVERRKSA
Ga0187847_1002145343300017948PeatlandMDMKDVLNHVREELREQPDSHFSEIYFRTVKHGASGTEVGEALTEILKRDEVRIKDGKWRLTAPVERRKSA
Ga0182022_106562813300019785FenMDMKDVMNQVREDLRKQPGSHFSEVYLRTVERGASGGDVRAALYEMLKRDEVRIKDGI
Ga0182022_111199813300019785FenMDMKDVMNQVREDIRKLPGSHFSDVYLRTVERGASGGDVRAALYEMLKRDEVRIKDGKFRMIAPVERRRSA
Ga0182022_113028313300019785FenIKFIHQQFRANATVPSQRIVLPSCFMSVKERGYVAMDMKDVMNQVREDIRKQPDSHFSEVYLRTVERGVTATDVRAALYEMLKRDEVRIKDGKFRMIAPVERRKSA
Ga0224537_101242013300022835SoilVHPPTVPSQRIVLPSCFMSVKERGYVAMDMKDVMNQVREDIRKQPGSHFSDVYLRTVERGASGGDVRAALYEMLKRDEVRIKDGKFRMIAPVERRRPA
Ga0224520_110162523300023075SoilMDMKDVMNQVREDIRKQPDSHFSEVYLRTVERGVTATDVRAALYEMLKRDEVRIKDGKFRMIAPVERRKSA
Ga0224558_100805843300023090SoilMDMKDVMNQVRKELRKQPGSHFSEVYLRTVERGASGTDVRAALYEMLKRDEVRIKDGI
Ga0224558_105184353300023090SoilMDMKDVMNQVREELRKQPDSHFSEVYLRTVERGASGTDVRVALYEMLKRDEVRIRDGKFRMIAPVERRKSA
Ga0224558_111658023300023090SoilMSVKERGYVAMDMKDVMNQVREDIRKQPDSHFSEVYLRTVERGVTATDVRAALYEMLKRDEVRIKDGKFRMIAPVERRKSA
Ga0224557_101191023300023101SoilMVLQGRFAPPKERGKVAMDMKDVMNQVREELRRQPDSHFSEVYIRTVEHGARGTDVRVALYEMLKRDEVRVKEGKFRMIAPVERRKSA
Ga0224557_104018723300023101SoilMDMKDVMNHVREELREQPDSYFAEICFRTGEHGANCGDVFEALTEMLRQNEVRTKDGKWRLIAPVERRKSA
Ga0224557_123876813300023101SoilRFVSAKERGYVAMDMKDVMNQVREELRKQPDSHFSEVYLRTVERGASGTDVRVALYEMLKRDEVRIRDGKFRMIAPVERRKSA
Ga0224544_100887033300023250SoilMDMKDVMNHVRKELREQPGSRFSEIYLRTVERGASDANVREALTEMLKRDEVRINEGRWRLIAPVERRKSA
Ga0224521_106129323300024233SoilMNMKDVMNQVREELRKQPDNHFSEIYFRLVEYGASGGDVRMALTEMLERDEVRIIAGKWKLISPVERRKSA
Ga0209838_102544123300026214SoilMEMKDVLNHVRAELREHPDSHFSELFFRTVKHGASTSEVSEALTEILKRDEVRIKDGKWRMIAPVERRQSA
Ga0209838_103800213300026214SoilMDMKDVLNHVRQELRARPDSHFSEIYIRTLKQGASSTEVREALVEILKRGEVRINDGKWRLIAPVERRRSALGFGCHCV
Ga0209839_1000659263300026294SoilMDTKELMENIRADLRKRPNSHFSEIFFRSVEHGANSATVREALTEMLQRDEVTTRDGKWKLSAPVERRKSV
Ga0255357_106295423300026381SoilGYVAMDMKDVMNQVREDIRKQPGSHFSDVYLRTVERGASGGDVRAALYEMLKRDEVRIKDGKFRMIAPVERRRSA
Ga0247845_101546623300026451SoilMDMKDVMNQVREDIRKLPGSHFSDVYLRTVERGASGGDVRAALYEMLKRDEVRIKDGKFRMIAPVERRKSA
Ga0247845_103775513300026451SoilMDMKDVMNHVREELREQPDSYFAEICFRTGEHGANCGDVFEALTEMLRKNEVRIKDGKWRLIAPVERRKSA
Ga0247846_105073523300026474SoilMDMKDVMNQVREELRRQPDSHFSEVYIRTVEHGARGTDVRVALYEMLKRDEVRVKEGKFRMIAPVE
Ga0209010_105174323300027370Forest SoilMDIRDVVNHIREELREQPDINFSEIYFRTVEHGVSSADVRAALVEMLNQDAIRIKDGKWRLASSVERRKSA
Ga0208199_110035513300027497Peatlands SoilMDVKDVMNHVREGLREQPDSHFSEIYFRTVEHGANSADVFEALAEMLKRDEVRIKDCKWRLIAPVERRKSA
Ga0209221_1000274193300027609Forest SoilMDIRDVVNHIREELREQPDINFSEIYFRTVEHGVSSADVRAALVEMLNQDAIRIKDGKWRLATRLERRKSA
Ga0209221_100030653300027609Forest SoilMDMTNVMNHVREELREQPDINFSEIYFRSVERGVSSAEVRGALVEMLNRNEIRIKDGKWRLASSVERRKSA
Ga0209221_100600843300027609Forest SoilMDMKDVMNYIREDLREEPDSHFPEIYFRTIERGASSACVREALTEMLKRDEVRIKDGKWRLIASAERRKSA
Ga0208827_121311813300027641Peatlands SoilVSMDVKDVMNHVREGLREQPDSHFSEIYFRTVEHGANSADVFEALAEMLKRDEVRIKDCKWRLIAPVERRKSA
Ga0209333_100543973300027676Forest SoilMDMKDVMNHIRKELREQPGSRFSEIYLRTVEHGASGANVREALTEMLKRDEIRINEGQWRLIAPVERRKSA
Ga0209333_117036513300027676Forest SoilHIREELREQPDINFSEIYFRTVEHGVSSADVRAALVEMLNQDEIRIKDGKWRLATRVERRKSA
Ga0209274_1020723513300027853SoilMDMTDVMNHVREELREQPDVNFSEIYFRSVEHGLSSAEVRGALVEMLNRNEISIKDGKWRLASSVERRKSA
Ga0209274_1046975723300027853SoilMDIKDVVNHIREELREQPDINFSEIYFRTVEHGVSSADVRAALVEMLNQDEIRITDGKWRLATRLERRKSA
Ga0209624_10000535153300027895Forest SoilMDMKDVMNQVRKELREQPGSRFSEIYLRTVERGASGANVRHALTEMLKRDEVRINEGKWRLIAPMERRKSASPTFH
Ga0209624_1077672313300027895Forest SoilMDMKDVLNHARAELREQPDSHFAEIYLRTVKHGASSAEVREALTEILKRDEVRIKDGKWRLVAPVERRRSA
Ga0209006_1117646213300027908Forest SoilMDMKDVLNHVREELREQPDSHFSEIYFRTIKHGASITEVREALVEILKRDEVRIKDGKWRLIAPVE
Ga0265356_102139013300028017RhizosphereSLKERINPMDMTNVMNHVREELREQPDINFSEIYFRSVERGVSSAEVRGALVEMLNRNEIRIKDGKWRLASSVERRKSA
Ga0302144_1026349413300028560BogMDMKDVLNHVREGLRERPDSHFAEIYFRTVKQGASGTEVHDALVEILKRDEVRIKDGKWRLIATVERRKSA
Ga0302233_1002279413300028746PalsaDVMNHVRKELREQPGSRFSEIYLRTVERGASDANVREALTEMLKRDEVRINEGRWRLIAPVERRKSA
Ga0302156_1030060223300028748BogMDMKDVLNHVREELREQPDSHFSEIYFRTVKHGASGTEVGEALTEILKRDEVRIKDGKWRLTAPVERRKS
Ga0302198_1056634523300028765BogTKGYCPMDMKDVLNHVREELREQPDSHFSEIYFRTVKHGASGTEVGEALTEILKRDEVRIKDGKWRLTAPVERRKSA
Ga0302221_1015088313300028806PalsaMDMKDVMNHVRKELREQPGSRFSEIYLRTVERGASDANVREALTEMLKRDEVRINEGRWRLIAPVERRKSASVTFHEMLKRIKAVL
Ga0302278_1013520413300028866BogRRKMKDTPMDMKDVLNHVREGLRERPDSHFAEIYFRTVKQGASGTEVHDALVEILKRDEVRIKDGKWRLIATVERRKSA
Ga0302200_1050067823300028909BogMDMKDVLNHVRIDLREKPDSHFSEICFRTLKHGASGSEVGAALTEILKRDEVRIIDGKWRLIAPVARRRSA
Ga0311327_1046426913300029883BogMEMKDVLNHVRQDLREQPDSHFSEIYLRTVEHGASGTEVREALAEILERDEVRINDGKWRLIAPVERRRSA
Ga0311341_1037805023300029908BogREELREQPDSHFSEIYFRTVKHGASGTEVGEALTEILKRDEVRIKDGKWRLTAPVERRKS
Ga0311362_1038665913300029913BogLHPSTPDLIVSLRRRKMTDTPMDMKDVLNHVREGLRERPDSHFAEIYFRTVKQGASGTEVHDALVEILKRDEVRIKDGKWRLIATVERRKSA
Ga0311362_1114086113300029913BogMDMKEIMEKVRADLRKLPNSRFSEVYIRTVEHGASSVEVREALTEMLKRDEVRIEDGKWRLIAPVERRKSA
Ga0311346_1093308123300029952BogMEMKDVLNHVRQDLREQPDSHFSEIYLRTVEHGASGTEVREALAEILERDEVRINDGKWRLIAPVER
Ga0302304_1006288723300029993PalsaRSLLMLRVKERSSVSMDMKDVMNHVRKELREQPGSRFSEIYLRTVERGASDANVREALTEMLKRDEVRINEGRWRLIAPVERRKSA
Ga0311339_1136848823300029999PalsaMEMKDVLNHVREELREQPDSHFSEIYFRTVKHGASGTEVGEALTEILKRDEVRIKDGKWRLIAPVERRRSA
Ga0311338_1085119323300030007PalsaMDMKDVLNHVREGLRERPDSHFAEIYFRTVKHGASGTEVSEALTEILKRDEVRIKDGKWRLIAPVERRRSA
Ga0311338_1170745113300030007PalsaMEMKDVLNHVREELREQPDSHFSEIYFRTVKHGASIMEVREALVEILKRDEVRIKDGKWRLIAPVERRRSA
Ga0302281_1013848513300030044FenKDVLNHVREGLRERPDSHFAEIYFRTVKQGASGTEVHDALVEILKRDEVRIKDGKWRLIATVERRKSA
Ga0311357_1003593613300030524PalsaSFPQTRSLLMLRVKERSSVSMDMKDVMNHVRKELREQPGSRFSEIYLRTVERGASDANVREALTEMLKRDEVRINEGRWRLIAPVERRKSA
Ga0210268_118865713300030629SoilMDMKEVMERVRANLRERPNSHFSEVYFRTVEHGASRAEVREALVELLQGDEVRIKDGKWRLIAPMERSRSA
Ga0265461_1031145913300030743SoilMDMKDVMNHIRKELREQPCSRFSEIYLRTVEHGASGANVREALTEMLKRDEIRINEGQWRLIAPVERRKSA
Ga0302325_1264359513300031234PalsaMDMKDVLNHVREELREQPDSHFSEIYFRTVKHGASGTEVGEALTEILKRDEVRIKDGKWRLIAPVERRRSA
Ga0265340_1051678013300031247RhizosphereMVLQGSFASAKEMGKVVMDMKDVMNQVREELRKQPDSHFSEVYIRTVEHGARGTDVRVALYEMLKRDEVRVKEGKFRMIAPVERRKS
Ga0302318_1011461713300031258BogMDMKDVLNHVREELREQPDSHFSEIYFRTVKRGASGTEVSEALTEILKRDEVRIKDGKWRLTAPVERRKSA
Ga0265316_1000715273300031344RhizosphereMVLQGSFASAKEMGKVVMDMKDVMNQVREELRKQPDSHFSEVYIRTVEHGARGTDVRVALYEMLKRDEVRVKEGKFRMIAPVERRKSA
Ga0310686_10926206833300031708SoilMDMKDVMNYIREDLREEPDSHFPEIYFRTIERGASSACVREALTEMLKRDEVRIKDGKWRLIASVERRKSA
Ga0310686_11258907913300031708SoilVMNHVREELREQPDINFSEIYFRSVERGVSSAEVRGALVEMLNRNEIRIKDGKWRLASSVERRKSA
Ga0302319_1125247623300031788BogMEMKDVLNHVREELREQPDSHFSEIYFRTVKHGASITEVREALVEILKRDEVRIKDGKWRLIAPVERRRSA
Ga0315742_1104480233300032756Forest SoilMDTKDVMNYIREDLREEPDSHFPEIYFRTIERGASSACVREALTEMLKRDEVRIKDGKWRLIASVERRKSA
Ga0326728_10006239453300033402Peat SoilMDMKDVMNQVREELRKQPDSHFSEVYLRTVERGASGTDVRVALYEMLKRDEVRIKDGKFRMIAPVERRKSA
Ga0326728_1011362743300033402Peat SoilMDMKDVMNQVREELRKQPDCHFSEVYLRTVERGASGTDVRVALYEMLKRDEVRIKDGKFRMIAPVERRKSA
Ga0334821_086544_446_6223300033798SoilLREQPDSYFAEIYFRTVEHGANCGDVFEALTEMLRKNEVRIKDGKWRLIAPVERRKSA
Ga0371487_0003739_5706_59513300033982Peat SoilVSAKERGNVAMDMKDVMNQVREELRKQPDCHFSEVYLRTVERGASGTDVRVALYEMLKRDEVRIKDGKFRMIAPVERRKSA
Ga0370514_064793_3_1883300034199Untreated Peat SoilREGLRERPDSHFAEIYFRTVKHGASGTEVSEALTEILKRDEVRIKDGKWRLIAPVERRRS
Ga0370514_191505_1_1983300034199Untreated Peat SoilLNHVREELREQPDSHFSEIYFRTVKHGASIMEVREALVEILKRDEVRIKDGKWRLIAPVEQRRSA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.