Metagenome Family F088045

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088045
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	78 residues
Representative Sequence	MDDQRSEILVHRSRAEVDGDAARFEFERPGVRPADVVSRPSRRSRLRRVFWVLLALAIIGAVVWYYPRPESQPK
Number of Associated Samples	78
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	90.74 %
% of genes near scaffold ends (potentially truncated)	97.25 %
% of genes from short scaffolds (< 2000 bps)	93.58 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (69.725 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (55.046 % of family members)
Environment Ontology (ENVO)	Unclassified (77.982 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (57.798 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.08% β-sheet: 0.00% Coil/Unstructured: 53.92%
Feature Viewer
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF02776	TPP_enzyme_N	38.53
PF09957	VapB_antitoxin	27.52
PF00873	ACR_tran	0.92
PF01609	DDE_Tnp_1	0.92
PF13432	TPR_16	0.92
PF02836	Glyco_hydro_2_C	0.92
PF01850	PIN	0.92

Showing 1 to 7 of 7 entries

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COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.92
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	0.92
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.92
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.92
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.92
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.92
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.92

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	30.28 %
Unclassified	root	N/A	69.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	30.28 %
Unclassified	root	N/A	69.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.28 %
Unclassified	root	N/A	69.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.77 %
Unclassified	root	N/A	69.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.09 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.83 %
Unclassified	root	N/A	69.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.83 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	4.59 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.83 %
Unclassified	root	N/A	69.72 %

Name	Rank	Taxonomy	Distribution
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.83 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	4.59 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.92 %
Unclassified	root	N/A	69.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.83 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples	0.92 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.92 %
Rubrimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rubrimonas	4.59 %
Unclassified	root	N/A	69.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.83 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.92 %
Rubrimonas cliftonensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rubrimonas → Rubrimonas cliftonensis	4.59 %
Unclassified	root	N/A	69.72 %
uncultured Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	0.92 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10178995	Not Available	1124	Open in IMG/M
3300004091\|Ga0062387_100453919	Not Available	881	Open in IMG/M
3300004091\|Ga0062387_100491271	Not Available	854	Open in IMG/M
3300004091\|Ga0062387_101752275	Not Available	506	Open in IMG/M
3300004092\|Ga0062389_102746119	Not Available	657	Open in IMG/M
3300004152\|Ga0062386_100719283	Not Available	820	Open in IMG/M
3300005332\|Ga0066388_104399736	Not Available	718	Open in IMG/M
3300005332\|Ga0066388_105765051	Not Available	626	Open in IMG/M
3300005764\|Ga0066903_101500367	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300010046\|Ga0126384_12400816	Not Available	510	Open in IMG/M

Showing 1 to 10 of 108 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	5.50%
Terrestrial	Environmental → Terrestrial	94.50%

Habitat	Taxonomy	Distribution
Cave	Environmental → Terrestrial → Cave	0.92%
Freshwater	Environmental → Aquatic → Freshwater	5.50%
Soil	Environmental → Terrestrial → Soil	93.58%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	2.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.99%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.83%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	82.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.50%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	55.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.92%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M

Showing 1 to 10 of 78 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_101789951	3300004080	Bog Forest Soil	MDDQRSEILVPRGRAEVDGDAARFEFERSGVRPVDVVSRPSRRSPLRWVFWVLLALAIIGAVVWYYPRPESQPKVAGRSQFGGP
Ga0062387_1004539192	3300004091	Bog Forest Soil	MDDQRSEILVHRSRAEVDGDAARFEFERPGVRPADVVSRPSRRSRLRRVFWVLLALAIIGAVVWYYPRPESQPK
Ga0062387_1004912711	3300004091	Bog Forest Soil	MDDQRDEILVHRSRAELDRDAARFEFERPGVRPIDVESKPSRRSWLRRLFWVLLVLAMIGAVVWYYPRPESQPKTGGRNQGPAPVAVATVQKGDMPVTLTG
Ga0062387_1017522752	3300004091	Bog Forest Soil	MDDQRSEILPRSRREIEGDSVPFEFERPGVRPGDVVSRPSRRSRLRWLFWVLLALAIIGAVVWYYPR
Ga0062389_1027461191	3300004092	Bog Forest Soil	MDDQRSEILVHRSRAEVDGDAARFEFERPGVRPADVVSRPSRRSRLRRVFWVLLALAIIGAVVWYYP
Ga0062386_1007192831	3300004152	Bog Forest Soil	MDDQRSEILVPRGRAEVDGDAARFEFERPGIRPTDVVSRPSRRSRLRWLFWVLLVLAIIGAVVWYYPRPENQPKTGGRNQFGGPVPV
Ga0066388_1043997361	3300005332	Tropical Forest Soil	MDDQRSDILVHRSRAEFDRDATRFDFERAGVRPIDVVSKPSRRSWLWRVFWVLFALAMIG
Ga0066388_1057650511	3300005332	Tropical Forest Soil	MDDQRDEILVHRSRADLDSDAARFEFERPGVRPVDVVSKPSRRSWLRRFFWVLLVLAMIGAAVWY
Ga0066903_1015003673	3300005764	Tropical Forest Soil	MDDQRDEILVHRGRTELDRDTARSGFERSGVGPLDVVTRPPRRSWLRRLLWVALVLAILGAAVWYFSRPESQPKTAGRGQFGGPVRVAEATVAKGDM
Ga0126384_124008161	3300010046	Tropical Forest Soil	LGAGFAKSARNSLHRIMDDQRDDILVHRSRAELDRDAARFEFDGPGIGPVDAVSRPSRRSWLRRLFWVLLV
Ga0126382_109743692	3300010047	Tropical Forest Soil	LGAGFAKSARNSLHRIMDDQRDDILVHRSRAELDRDAARFEFDGPGIGPVDAVSRPSRRSWLRRLFWVLLVLAIIGAVVWYY
Ga0074044_108649052	3300010343	Bog Forest Soil	MDDQRSEILVPRGRAEVDGDAARFEFERPGVRPTDVVSRPSHRSRLRWLFWVLLVLAIIGAAVWYYPRPENQPKTGGRNQFGGPVPVGVATVQK
Ga0126381_1002655351	3300010376	Tropical Forest Soil	MDDQRSEILVHRSRAEVEDDTARFEFERPGVRPVDAGSKPSRRPRLRWLFWGLLMLAIVGAVVWYYP
Ga0126381_1009668222	3300010376	Tropical Forest Soil	MDDQRSEILIPRGRAEVGGDVARFEFERPGVRPADVVSRPSRRSRLRWLFWVLLVLAIIGAVVWYYPRPESQPKIAARNQFGGPVPIGVATVKEGD
Ga0126383_105456522	3300010398	Tropical Forest Soil	MDDQRDDILVHRRRAELDRDAARFEFDRPGVRPIGDVSKPSRRSWLRRLFWLLLVLAIIGAVVWYY
Ga0126369_114913881	3300012971	Tropical Forest Soil	MDDQHDEILVHRSRADVDRDAGRFEFERPGVRPSDLVSRPSRRSWLRRLFWILLAVAIIGAVVWYYPRPEGQPKTG
Ga0182036_102454722	3300016270	Soil	MDDQHDEILVNRSRAEVDRDAGRFEFERPGVRPVDVVSRRPRRAWLRWLFWTLLVLVIIGAAVWYFPR
Ga0182036_112337402	3300016270	Soil	MDDQHDDILVHRSRTAADGDAARFEFERPGVRPIDVVSRPRRRSWAWRLFWVLLVLAIIGAVVWYYHRPSEQPKNAGRSQFGGPVPVALATVTK
Ga0182041_103333892	3300016294	Soil	MDDQHDDEILVHRSRAELDRDAARFEFERPGVRPSDAVSRPRRRLWLRWLVWVLLVPAIIGAAVWYYHRPAEEPKTAGRSQFGAPVPVALATVQKGDMPVSLT
Ga0182041_117653551	3300016294	Soil	MDDQHDDILVHRSRTAADGDAARFEFERPGVRPVDVVSRPRRRSWLWRLFWMLLALAIIAAAVWYWPRPENQPKNAGRGQFGGPVPVALATVT
Ga0182041_121473822	3300016294	Soil	MDDQHDDILVHRSRTAADGDAARFEFERPGVRPIDVVSRPRRRSWAWRLFWVLLVLAIIG
Ga0182035_109336782	3300016341	Soil	MDDQHDEILVNRSRAEVDRDTGRFEFERPGVRPVDVVSRRPRRAWLRWLFWTLLVLVIIGAAVWYFPRPNN
Ga0182035_113577861	3300016341	Soil	MDDQPSEILVHRSRAEAEGDAARFEFERRGVRPVDVVSRPLRRSWLRRLFWVLLVLAIIGATVWYYPRPESQPKTGGRNQFGG
Ga0182032_109878412	3300016357	Soil	VLRHAGTNSPYRIMDDQHDDEILVHRSRAESDRDAARFEFEHPGVQPSDVVSRPRHRSRLRWLVWVLLVLAIIGAAVWYYHRPAEEPKTAGRSQFGAPVPVALATVQKGDMP
Ga0182032_116263231	3300016357	Soil	MDDQHDEILVHRSRAEAERDRARFEFEHPGIRPGDVVSRPRRRSRLRWLVWALLVLTMIGAAVWYYHRPSEQPKTGGRSQFGGP
Ga0182034_101279551	3300016371	Soil	MDDQHDEILVHRSRAEVDGDAARFEFDRSGVRPSDVVSRPRHRSRLRWLFWLLLVLAIIGAVVWY
Ga0182034_104656781	3300016371	Soil	MDDQRDEILVHRSRAELDSDAARFEFERPGVRPVDVVSKPSRRSWLRRFFWALLVLAMI
Ga0182040_111505931	3300016387	Soil	MDDQRDEILVHRSRAELERDDARLDFEHPGVRPIDIVSKPSRRSWLWRLFWVLLV
Ga0182040_114448111	3300016387	Soil	MDDQHDDEILVHRSRAESDRDAARFEFEHPGVQPSDVVSRPRHRSRLRWLVWVLLVLAIIGAAVWYYHRPAEEPKTAGRSQFGAPVPVALATVQKGDMPVTLTGL
Ga0182037_100241132	3300016404	Soil	MDDQRSEILVPRGRAEVDGDAARFEFERPGVRPGDVVSRPARRSRLRWLFWVLLVLAIIGVGVWYYPKPENQPKTAGRNQFGGPTPVGVATVQRATCRLP
Ga0182038_109878551	3300016445	Soil	MDDQHDDILVHRSRAEADRDPSRFEFERPGDRPVDVVSRPRRRSWLWRVFWVLLAVAIIAAAVWYWPRPESQPKTAGRSQFG
Ga0187770_102065971	3300018090	Tropical Peatland	MDDQRSELLVPRGRAEVDGDAARFEFERPGVRPTDVVSRPSRRSRLRWLFWVLLVLAI
Ga0210394_117722281	3300021420	Soil	MDDQHDEILVHRSRAEADGDAARFEFERPGVRPIDIASRPRHRSWLRWLFWLLLVLAILGAVVWYYHRPEGQPKTGGRN
Ga0187846_103677641	3300021476	Biofilm	MDDQHDDILVHRSRAEADGDAARFEFERPGVRPAGIVSRPRRRSWLWRLFWVLLALAVIGTAAWYYHRPSEQPENAGRGQFGGPVPVALATVQKGEMPV
Ga0126371_128539691	3300021560	Tropical Forest Soil	MDDQRDEILVHRSRAELERDDARLDFEHPGVRPIDIVSKPSRRSWLWRLFWVLLVLAIIG
Ga0170834_1028616791	3300031057	Forest Soil	MDDQRDDILVHRSRAELERDDARFEFERPGVRPIDVVSRPSRRSWLWRLFWVLLVLAIIGAAVWYYPRPEAQPKTGGRGQLGA
Ga0318516_104134031	3300031543	Soil	MDDQRSEILIPRGRAEVGGDVARFEFERPGVRPADVVSRPSRRSRLRWLFWVLLVLAVIGAAVWYYPRP
Ga0318541_101566071	3300031545	Soil	MDDQHDEILVNRSRAEVDRDAGRFEFERPGVRPVDVVSRRPRRAWLRWLFWTLLVLVIIGAAVWYFPRPNN
Ga0318541_105390252	3300031545	Soil	MDDQHDDILVHRSRAEADGAAARFEFERPGVRPVDVVSRPHRRSRLRWLLWALLVLAVIGAAVWYYHRPSEQPKTAGRGQFGGPVPVALATVQK
Ga0318573_104362921	3300031564	Soil	MDDQHDDILVHRSRAEADRDPSRFEFERPGDRPVDVVSRPRRRSWLWRVFWVLLAVAIIAAAVWYWPRPESQPKTAGRSQFGGPVPVALATVQKG
Ga0318515_105182351	3300031572	Soil	MDDQHDDILLRRSRAELDRDAARFEFERPGVPPSDVVSRPRQRSRLRWLFWALLVLAVIAAAIWYYHRPSEQPKTAGRGQFGGPVPVSLATVKK
Ga0318542_104174222	3300031668	Soil	MDDQHDDILVHRSRTAADGDAARFEFERPGVRPVDVVSRPRRRSWLWRLFWMLLALAIIAAAVWYWPRPENQ
Ga0318561_102361341	3300031679	Soil	MDDQRSEILIPRGRAEVGGDVARFEFERPGVRPADVVSRPSRRSRLRWLFWVLLVLAVIGAAVWYYPRPENQQK
Ga0318561_103896763	3300031679	Soil	MDDQHDDILVHRSRTAADGDAARFEFERPGVRPVDVVSIPRRSWLWRLFWVLLALAI
Ga0318574_104783131	3300031680	Soil	MDDQRDEILVHRSRAEVDGDTARFEFDRPGVRPSDVMSRPLRRSRLRWLFWALLVLAIIGAAVWYYPRPE
Ga0318560_107531611	3300031682	Soil	MDDQRDEILVHRSRAEVDGDTARFEFDRPGVRPSDVMSRPLRRSRLRWLFWALLVLAIIGAAVWYYPRPESQPK
Ga0306917_103260191	3300031719	Soil	MDDQHDDILVHRSRAEADGAAARFEFERPGVRPVDVVSRPHRRSRLRWLLWALLVLAVIGAAVWYYHRPS
Ga0318493_103787511	3300031723	Soil	MNDQHDEILVHRSRAEVDRDAPRFEFERPGVRPSDVVSRPRHRSRLRWLFWLLLVLAIIGAVVWYYHRPS
Ga0306918_101725462	3300031744	Soil	MDDQRSEILIPRGRAEVGGDVARFEFERPGVRPADVVSRPSRRSRLRWLFWVLLVLAVIGAAVWYYPRPENQPKTPGRNQFGGPVPVGV
Ga0318502_101040611	3300031747	Soil	MDDQRSEILPRSRREIDGDVARFEFERPGLRPGDVVSRPARRSRLRWLFWMILVLAIIGAVVWYYPRPED
Ga0318502_103925301	3300031747	Soil	MDDQRDEILVHRSRAEVDGDTARFEFDRPGVRPSDVMSRPLRRSRLRWLFWALLVLAIIGAAVWYYPRPESQPKTGGRGQFGGPVPVALATVQK
Ga0318502_106142842	3300031747	Soil	MDDQHDDILVHRSRTAADGDAARFEFERPGVRPVDVVSRPRRSWLWRLFWMLLALAIIAAAVWYWPRPESQPKNAGRGQFGGPVP
Ga0307477_104601161	3300031753	Hardwood Forest Soil	MDDQRSEILVRRSRAEVDGDPARFEFERPGVRPVDAVSRPSRRPWLRWLVWVLLILAIIGAVVWFYPRPESQPKTGGRSQFGAPT
Ga0307477_105678891	3300031753	Hardwood Forest Soil	MDDQRSEILEHRSRAEVEGDAARFEFERPGVRPVDVVSKPSRRSWLRWLFWTLLLLAIIGAAVWHYPR
Ga0318509_104031691	3300031768	Soil	MDDQHDDILVHRSRAEADGAAARFEFERPGVRPVDVVSRPHRRSRLRWLLWALLVLAVIGAAVWYYHRPSEQPKTAGRGQFGGPVPVALATVQKGAM
Ga0318546_106330282	3300031771	Soil	MDDQRSEILPRSRREIDGDVARFEFERPGLRPGDVVSRPARRSRLRWLFWMILVLAIIGAVVWYYPRPENQPKTVGRSQFGGPVPVGVATVQKGNM
Ga0318498_101002163	3300031778	Soil	MDDQHDEILVHRSRAEADGAGARFEFERPGVRPSDVVSRPRHRSRLRWLFWLLLVLAIIGAVVWYYHRPSEQ
Ga0318566_102343603	3300031779	Soil	MDDQHDDILVHRSRAEADGAAARFEFERPGVRPVDVVSRPRRRSRLRWLLWALLVLAVIGAAVWYYHRPSEQPKTAGRGQFGGPVPV
Ga0318566_105063842	3300031779	Soil	MDDQHDDILVHRSRAEADRDPSRFEFERPGDRPVDVVSRPRRRSWLWRVFWVLLAVAIIAAAVWY
Ga0318508_11565201	3300031780	Soil	MDDQRSEILIPRGRAEVGGDVARFEFERPGVRPADVVSRPSRRSRLRWLFWVLLVLAVIGAAVWYYPRPENQPKTPGRNQFG
Ga0318529_102663243	3300031792	Soil	MDDQHDDILVHRSRAEADRDPSRFEFERPGDRPVDVVSRPRRRSWLWRLFWMLLALAIIAAAVWYWPRPENQPKNAGRGQFGGPVPVALATVT
Ga0318548_102742182	3300031793	Soil	MDDQRSEILIPRGRAEVGGDVARFEFERPGVRPADVVSRPSRRSRLRWLFWVPLVLAIIGAVVWYYP
Ga0318503_103071271	3300031794	Soil	MDDQHDEILVHRSRAEVDGDAARFEFDRSGVRPSDVVSRPRHRSRLRWLFWLLLVLAIIGAVVWYYHRPSEQPKTGGRNQFGGPTPVGV
Ga0318576_100853181	3300031796	Soil	MDDQRSEILVRRSRAEVDGDPARFEFERPGVRPVDAVSRPSRRPWLRWLVWVLLILAIIGAVVWFY
Ga0318497_104711131	3300031805	Soil	MDDQRSEILVRRSRAEVDGDPARFEFERPGVRPVDAVSRPSRRPWLRWLVWVLLILAIIGAV
Ga0318497_104816911	3300031805	Soil	MDDQRSEILEHRGRAEVEGDAARFEFERPGVRPVVDFVSRPSRRSWLRWLFWTLLLLAIIGAAVWHYPK
Ga0318567_101076471	3300031821	Soil	MDDQRSEILVPRGRAEVDGDAARFEFERPGVRPGDVVSRPARRSRLRWLFWVLLVLAIIGVGVWY
Ga0318567_108904451	3300031821	Soil	MDDQHDEILVHRSRAEVDGDAARFEFDRSGVRPSDVVSRPRHRSRLRWLFWLLLVLAIIGAVVWYYHRPSEQPKTGGRNQFGGPT
Ga0318517_103998921	3300031835	Soil	MDDQHDDILVHRSRTAADGDAARFEFERPGVRPVDVVSRPHRRSRLRWLLWALLVLAVIGAAVWYYHRPSEQPK
Ga0318495_101525293	3300031860	Soil	MDDQHDEILVHRSRAEVDGDAARFEFDRPGVRPSDVVSRPRHRSRLRWLFWLLLVLAIIGAVVWYYHRPSEQPKTGGRNQFGGPTPVAVATVQK
Ga0306919_110649712	3300031879	Soil	VLRHAGTNSPYRIMDDQHDDEILVHRSRAESDRDAARFEFEHPGVQPSDVVSRPRHRSRLRWLVWVLLVLAIIGAAVWYYHRPAEEPKTAGRSQFG
Ga0306925_102747571	3300031890	Soil	MDDQHDDILVHRSRAEADGAAARFEFERPGVRPVDVVSRPHRRSRLRWLLWALLVLAVIGAAVWYYHRPSEQPKTAGRG
Ga0306925_118936021	3300031890	Soil	MDDQRDEILVHRSRVELDRGAARFEFERPGVRPADVVSKPSRRSWLRRFFGVLLVLAM
Ga0318536_100472671	3300031893	Soil	MNDQHDEILVHRSRAEVDRDAPRFEFERPGVRPSDVVSRPRHRSRLRWLFWLLLVLAIIGAVVWYYHRPSEQPKTGGRNQFGGPTPVGVATVQKG
Ga0318536_100566981	3300031893	Soil	MDDQHDDILVHRSRTAADGDAARFEFERPGVRPVDVVSRPRRRSWLWRLFWMLLALAIIAAAVWYWPRPENQPKNAGRGQFGGPVPVALATVTK
Ga0318551_100133103	3300031896	Soil	MDDQRSEILVRRSRAEVDGDPARFEFERPGVRPVDAVSRPSRRPWLRWLVWVLLILAIMGAVVWF
Ga0318551_101985712	3300031896	Soil	MDDQRSEILIPRGRAEVGGDVARFEFERPGVRPADVVSRPSRRSRLRWLFWVLLVLAVIGAAVWYYPRPENQPKTPGRNQFGGPV
Ga0318551_102807951	3300031896	Soil	MDDQHDDILLRRSRAAADGDAARFEFERPSVRPNDVVAPPRRRLRLRWLVWVLLA
Ga0318520_107332071	3300031897	Soil	MDDQHDDILVHRSRAEADRDPSRFEFERPGDRPVDVVSRPRRRSWLWRLFWMLLALAIIAAAVWYWPRPESQPKNAGRGQFGGPVPVALAT
Ga0306923_108221402	3300031910	Soil	MDDQRSEILEQRGRAEVEGHAARFEFERPGVRPVVDFVSRPSRRSWLRWLFWTLLLLAIIGAAIWHYPKPETQPKTGG
Ga0310912_100484553	3300031941	Soil	MDDQRSEILIPRGRAEVGGDVARFEFERPGVRPADVVSRPSRRSRLRWLFWVLLVLAVIGVVVWYYPRPENQPRTAGRSQFGGPAPVGVATVQKGD
Ga0310912_103191072	3300031941	Soil	MDDQHDDEILVHRSRAELDRDAARFEFERPGVRPNDVVAPPRGRLRLRWLFWALLVL
Ga0310912_114721461	3300031941	Soil	MDDQRDEILVHRSRAEVDGDTARFEFDRPGVRPSDVMSRPLRRSRLRWLFWALLVLAIIGAAVWYYPRPESQPKTGGRGQ
Ga0310913_102378364	3300031945	Soil	MDDQHDDILLRRSRAELDRDAARFEFERPGVPPSDVVSRPRQRSRLRWLFWALLVLAVIAAAIWY
Ga0310913_112935251	3300031945	Soil	MDDQHDDEILVHRSRAESDRDAARFEFEHPGVQPSDVVSRPRHRSRLRWLVWVLLVLAIIGAAVWYYHRPAEEPKTAGRSQFGAPVPVA
Ga0310909_107233211	3300031947	Soil	MDDQRDEILVHRSRAELERDDARLDFEHPGVRPIDIVSKPSRRSWLWRLFWVLLVLAIIGAAVWYYPRPETQ
Ga0306926_108972132	3300031954	Soil	MDDQRDEILVHRSRAELERDDARLDFEHPGVRPIDIVSKPSRRSWLWRLFWVLLVLAIIGAAV
Ga0306926_114695751	3300031954	Soil	MDDQHDDILLRRSRAELDRDAARFEFERPGVRPNDVVAPPRRRLRLRWLFWVLLVLAVIAAAIWYYHRPSEQPKTAGRGQFGGPVPV
Ga0307479_105602402	3300031962	Hardwood Forest Soil	MDDQRSEILVRRSRAEVDGDPARFEFERPGVRPVDAVSRPSRRHWLRWLVWVLLILAIIGAVVWFYPRPESQPKTGGRSQFAAPTPV
Ga0318531_100439941	3300031981	Soil	MDDQHDEILVHRSRAEVDGDAARFEFDRSGVRPSDVVSRPRHRSRLRWLFWLLLVLAIIGAVVWYYHRPSEQPKTGGRNQFGGPTPVGVATVQKGDMPVT
Ga0318531_103244841	3300031981	Soil	MDDQRSEILPRSRREIDGDVARFEFERPGLRPGDVGSRPARRSRLRWLFWMILVLAIIGAVVWYY
Ga0306922_105516361	3300032001	Soil	MDDQHDEILVNRSRAEVDRDTGRFEFERPGVRPADVVSRRPRRAWLRWLFGTLLVLVII
Ga0306922_122847061	3300032001	Soil	MDDQHDDEILVHRSRAELDRDAARFEFERPGVRPNDVVAPPRGRLRLRWLFWALLVLAVIAAAIWYYHRPSEQPKTAGRGQFGGPVPVALA
Ga0310911_101086831	3300032035	Soil	MDDQRSEILPRSRREIDGDVARFEFERPGLRPGDVVSRPARRSRLRWLFWMILVLAIIGAVVWYYPRPENQPKTVGRSQFGGPVPVGVATVQKG
Ga0318559_100769851	3300032039	Soil	MDDQHDEILVHRSRAEVDGDAARFEFDRSGVRPSDVVSRPRHRSRLRWLFWLLLVLAIIGAVVWYY
Ga0318556_101400593	3300032043	Soil	MDDQHDDILLRRSRAELDRDAARFEFERPGVRPNDVVAPPRGRLRLRWLFWALLVLAVIAAAIWYYHRPSEQPKTAGRGQFGGPVPV
Ga0318558_100253714	3300032044	Soil	MDDQHDEILVHRSRAEVDGDAARFEFDRSGVRPSDVVSRPRHRSRLRWLFWLLLVLAIIGAVVWYYHRP
Ga0318532_101154393	3300032051	Soil	MDDQHDDILVHRSRTAADGDAARFEFERPGVRPVDVVSRPRRSWLWRLFWMLLALAIIAAAVW
Ga0318532_101910202	3300032051	Soil	MDDQRSEILIPRGRAEVGGDVARFEFERPGVRPADVVSRPSRRSRLRWLFWVLLVLAVIGAAVWYYPRPENQP
Ga0318506_104171211	3300032052	Soil	MDDQHDDILVHRSRAEADRDPSRFEFERPGDRPVDVVSRPRRRSWLWRVFWVLLAVAIIAAAVWYWPRPESQPKTAG
Ga0318570_100404021	3300032054	Soil	MDDQHDEILVHRSRAEADGAGARFEFERPGVRPSDVVSRPRHRSRLRWLFWLLLVLAILGAVVWYYHR
Ga0318570_101602152	3300032054	Soil	MDDQRSEILIPRGRAEVGGDVARFEFERPGVRPADVVSRPSRRSRLRWLFWVLLVLAVIGAAVWYYPRPENQPKTPG
Ga0318533_101681692	3300032059	Soil	MDDQHDEILVNRSRAEVDRDAGRFEFERPGVRPVDVVSRRPRRAWLRWLFWTLLVLVIIGAAVWYFPRPNNQPPPSGRTQAGTPVPVGVSPVQKGDMPVILN
Ga0318505_102599802	3300032060	Soil	MDDQRSEILPRSRREIDGDVARFEFERPGLRPGDVVSRPARRSRLRWLFWMILVLAIIGAVVWYYPRPENQPKTVGRSQFGGPV
Ga0318510_103539991	3300032064	Soil	MDDQRSEILPRSRREIDGDVARFEFERPGLRPGDVVSRPARRSRLRWLFWMILVLAIIGAVVWYYPRPE
Ga0318514_105541422	3300032066	Soil	MDDQHDDILVHRSRTAADGDAARFEFERPGVRPVDVVSRPRRSWLWRLFWMLLALAIIAAAVWYWPRPESQPKNAGRGQY
Ga0318524_103837431	3300032067	Soil	MDDQRSEILVRRSRAEVDGDPARFEFERPGVRPSDVVSRPRHRSRLRWLFWLLLVLAILGAVVW
Ga0318577_102698582	3300032091	Soil	MDDQRSEILIPRGRAEVGGDVARFEFERPGVRPADVVSRPSRRSRLRWLFWVLLVLAVIGAAVWYYPRPENQPKTPGRNQFGGPVPVGVATVQ
Ga0306920_1036599021	3300032261	Soil	MDDRPSDILVTRGRTQVDDDAARFEFDRLGVPPADVVAKPARRSRLRRLFWVVLVLAIIGAAAWYFPRPETQPKTAAGRNQFGGPVPVGVATVQKGSMP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters