Metagenome Family F088062

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F088062
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	69 residues
Representative Sequence	MATMSSARFRSLYRRHKQAYEAVYHFSANSVGHSVAGFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Number of Associated Samples	52
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.81 %
% of genes near scaffold ends (potentially truncated)	27.52 %
% of genes from short scaffolds (< 2000 bps)	82.57 %
Associated GOLD sequencing projects	45
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (71.560 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.450 % of family members)
Environment Ontology (ENVO)	Unclassified (72.477 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.633 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.04% β-sheet: 0.00% Coil/Unstructured: 47.96%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00436	SSB	50.46
PF16916	ZT_dimer	2.75
PF04397	LytTR	1.83
PF07883	Cupin_2	0.92
PF13570	PQQ_3	0.92
PF08240	ADH_N	0.92
PF04098	Rad52_Rad22	0.92
PF03475	3-alpha	0.92
PF00561	Abhydrolase_1	0.92
PF05565	Sipho_Gp157	0.92
PF03631	Virul_fac_BrkB	0.92
PF01979	Amidohydro_1	0.92
PF00078	RVT_1	0.92
PF02517	Rce1-like	0.92
PF01610	DDE_Tnp_ISL3	0.92
PF00999	Na_H_Exchanger	0.92
PF00069	Pkinase	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	50.46
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	50.46
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.67
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.92
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.92
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.92
COG2258	N-hydroxylaminopurine reductase YiiM, contains MOSC domain	Defense mechanisms [V]	0.92
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.92
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.92
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.92
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.92
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.56 %
Unclassified	root	N/A	28.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.56 %
Unclassified	root	N/A	28.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.56 %
Unclassified	root	N/A	28.44 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	57.80 %
Unclassified	root	N/A	28.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	41.28 %
Unclassified	root	N/A	28.44 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.28 %
Unclassified	root	N/A	28.44 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.28 %
Unclassified	root	N/A	28.44 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.28 %
Unclassified	root	N/A	28.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.75 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.92 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.28 %
Unclassified	root	N/A	28.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.75 %
Terriglobus tenax	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus tenax	0.92 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10494672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300009826\|Ga0123355_10800226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1051	Open in IMG/M
3300009826\|Ga0123355_10807309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300010048\|Ga0126373_10265216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1697	Open in IMG/M
3300010048\|Ga0126373_10474676	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300010048\|Ga0126373_10650543	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300010049\|Ga0123356_12866895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300010369\|Ga0136643_10667188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300010376\|Ga0126381_100009542	All Organisms → cellular organisms → Bacteria → Acidobacteria	10895	Open in IMG/M
3300010376\|Ga0126381_100034473	All Organisms → cellular organisms → Bacteria → Acidobacteria	6073	Open in IMG/M
3300010376\|Ga0126381_100082163	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus tenax	4057	Open in IMG/M
3300010376\|Ga0126381_100195651	All Organisms → cellular organisms → Bacteria	2698	Open in IMG/M
3300010376\|Ga0126381_100948101	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300010376\|Ga0126381_101060239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1170	Open in IMG/M
3300010376\|Ga0126381_101339696	All Organisms → cellular organisms → Bacteria → Acidobacteria	1035	Open in IMG/M
3300010376\|Ga0126381_101542769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300010376\|Ga0126381_101665686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	921	Open in IMG/M
3300010376\|Ga0126381_101992513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300010376\|Ga0126381_102074821	Not Available	819	Open in IMG/M
3300010376\|Ga0126381_102465001	Not Available	746	Open in IMG/M
3300010376\|Ga0126381_102956886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300010376\|Ga0126381_103308131	Not Available	636	Open in IMG/M
3300010376\|Ga0126381_104038204	Not Available	571	Open in IMG/M
3300010398\|Ga0126383_10749159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1057	Open in IMG/M
3300010398\|Ga0126383_11645803	Not Available	731	Open in IMG/M
3300016270\|Ga0182036_10502586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300016294\|Ga0182041_10689880	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	904	Open in IMG/M
3300016294\|Ga0182041_10973673	Not Available	766	Open in IMG/M
3300016341\|Ga0182035_10126749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1920	Open in IMG/M
3300016341\|Ga0182035_10994342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300016357\|Ga0182032_10633339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300016357\|Ga0182032_11570552	Not Available	572	Open in IMG/M
3300016371\|Ga0182034_10092990	All Organisms → cellular organisms → Bacteria → Acidobacteria	2137	Open in IMG/M
3300016387\|Ga0182040_10511335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	961	Open in IMG/M
3300016404\|Ga0182037_11424774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300016404\|Ga0182037_12040666	Not Available	515	Open in IMG/M
3300016422\|Ga0182039_10121072	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1974	Open in IMG/M
3300016422\|Ga0182039_10410743	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300016422\|Ga0182039_11232565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300016445\|Ga0182038_10239730	Not Available	1451	Open in IMG/M
3300021560\|Ga0126371_12796582	Not Available	592	Open in IMG/M
3300031543\|Ga0318516_10843208	Not Available	517	Open in IMG/M
3300031544\|Ga0318534_10422717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300031545\|Ga0318541_10234633	Not Available	1018	Open in IMG/M
3300031545\|Ga0318541_10372885	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300031545\|Ga0318541_10483741	Not Available	693	Open in IMG/M
3300031545\|Ga0318541_10486457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300031545\|Ga0318541_10537437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300031573\|Ga0310915_10135455	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1694	Open in IMG/M
3300031573\|Ga0310915_10847430	Not Available	642	Open in IMG/M
3300031573\|Ga0310915_10866158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300031573\|Ga0310915_11217515	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300031679\|Ga0318561_10355334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300031719\|Ga0306917_10337253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300031719\|Ga0306917_10660225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300031719\|Ga0306917_10755602	Not Available	763	Open in IMG/M
3300031719\|Ga0306917_10796069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300031724\|Ga0318500_10715682	Not Available	511	Open in IMG/M
3300031744\|Ga0306918_10415260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300031744\|Ga0306918_10593043	Not Available	868	Open in IMG/M
3300031744\|Ga0306918_10728786	Not Available	775	Open in IMG/M
3300031751\|Ga0318494_10930705	Not Available	510	Open in IMG/M
3300031764\|Ga0318535_10256556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300031768\|Ga0318509_10148751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1291	Open in IMG/M
3300031768\|Ga0318509_10799598	Not Available	522	Open in IMG/M
3300031777\|Ga0318543_10414545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300031780\|Ga0318508_1191158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300031833\|Ga0310917_10654608	Not Available	712	Open in IMG/M
3300031833\|Ga0310917_10867265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300031879\|Ga0306919_10321900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1177	Open in IMG/M
3300031879\|Ga0306919_10496155	All Organisms → cellular organisms → Bacteria → Proteobacteria	941	Open in IMG/M
3300031879\|Ga0306919_10872229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300031879\|Ga0306919_10936708	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300031879\|Ga0306919_11268420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300031890\|Ga0306925_10100639	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3076	Open in IMG/M
3300031890\|Ga0306925_10256266	All Organisms → cellular organisms → Bacteria → Proteobacteria	1885	Open in IMG/M
3300031890\|Ga0306925_11207630	Not Available	757	Open in IMG/M
3300031896\|Ga0318551_10879683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300031910\|Ga0306923_10018001	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7405	Open in IMG/M
3300031910\|Ga0306923_10137025	All Organisms → cellular organisms → Bacteria	2787	Open in IMG/M
3300031910\|Ga0306923_10445084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1470	Open in IMG/M
3300031910\|Ga0306923_11668665	Not Available	660	Open in IMG/M
3300031912\|Ga0306921_10031648	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5905	Open in IMG/M
3300031912\|Ga0306921_10124773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3002	Open in IMG/M
3300031912\|Ga0306921_10628986	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300031941\|Ga0310912_10295558	Not Available	1253	Open in IMG/M
3300031942\|Ga0310916_10015910	All Organisms → cellular organisms → Bacteria → Proteobacteria	5183	Open in IMG/M
3300031942\|Ga0310916_10383449	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300031946\|Ga0310910_10569715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300031947\|Ga0310909_10374594	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300031947\|Ga0310909_10465030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300031947\|Ga0310909_10574301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300031954\|Ga0306926_10012788	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9385	Open in IMG/M
3300031954\|Ga0306926_11509472	Not Available	775	Open in IMG/M
3300032055\|Ga0318575_10614308	Not Available	551	Open in IMG/M
3300032059\|Ga0318533_10620879	All Organisms → cellular organisms → Bacteria → Acidobacteria	793	Open in IMG/M
3300032063\|Ga0318504_10590425	Not Available	533	Open in IMG/M
3300032066\|Ga0318514_10240232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300032067\|Ga0318524_10230566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300032261\|Ga0306920_100659957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1544	Open in IMG/M
3300032261\|Ga0306920_101385657	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300032261\|Ga0306920_101810408	Not Available	861	Open in IMG/M
3300032783\|Ga0335079_10200696	All Organisms → cellular organisms → Bacteria → Acidobacteria	2213	Open in IMG/M
3300032805\|Ga0335078_10157222	All Organisms → cellular organisms → Bacteria	3207	Open in IMG/M
3300032892\|Ga0335081_10258353	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2345	Open in IMG/M
3300032893\|Ga0335069_10166250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2719	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.33%
Host-Associated	Host-Associated	3.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.33%
Arthropoda	Host-Associated → Arthropoda	3.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.33%
Digestive System	Host-Associated → Arthropoda → Digestive System	3.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.67%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	3.67%
Loam	Environmental → Terrestrial → Soil → Loam	0.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	72.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.67%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	3.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.67%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	3.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.92%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010369	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 3)	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_104946722	3300004633	Tropical Forest Soil	SATRIRSLYRRHTQAYEAVYHFSADSVGHSIAGFSATRTTETSPVPSADERFRAAVRREMAKAGLA*
Ga0123355_108002262	3300009826	Termite Gut	MATMSAARIRSLHRRHNQAHEAVYDFSSNSVPQVGTGFSATRATEASPALSDDERFRAALRREMAKAGLA*
Ga0123355_108073092	3300009826	Termite Gut	MATMSATRIRSLYRRYDQAHEAVYHFSANPVRQVVTGFSAIRATEASPAPSADERFRAAVRREMAKAGLA*
Ga0126373_102652162	3300010048	Tropical Forest Soil	MATMSAARIRSVYRRHTQAHEAVYRFSANSVRRVVTGFSAIRAIEASPAPSADERFRAALRREMAKAGLT*
Ga0126373_104746762	3300010048	Tropical Forest Soil	MYRRRKQAYEAVYHFSANSVGHSIARFSATRTSETSPAPSADERFRAAVRREMAKAGLA*
Ga0126373_106505432	3300010048	Tropical Forest Soil	SSVRFRSLYRRHKQAYEAVYHFSANPVRQVVTGFSATRTTETLPVPSADERFRAAVRREMAKAGLA*
Ga0123356_128668951	3300010049	Termite Gut	TEITRNKIHQGDHSMATMSTVRIRSLYRRRTQAHKAVYHFFTNSVRQVGTGFSAARATETSPVPSADERFRAAVRREMAKAGLA*
Ga0136643_106671881	3300010369	Termite Gut	MATMSSARIRSMYRRHNHAHEAVYHFSTNSVRHVVTGFSATRATEASPAPSADERFRAAVRREMAKAGLA*
Ga0126381_1000095428	3300010376	Tropical Forest Soil	MAIMSAARTRSLYRRHTQAHEAVYHFSANSVRRVATGFSATRATEASPTPSADEHFRAALRREVAKDGLA*
Ga0126381_1000344735	3300010376	Tropical Forest Soil	MSSARFCSLYRRRKQSYEAVYHFSANSVGRSIAGFSATRTTETSPVPSADEGFRAAVRREMAKAGLA*
Ga0126381_1000821632	3300010376	Tropical Forest Soil	MATMSTVRIRSLYRRHTQTYEAVYHFSANPVGHSIAGFLATRTTEASPVPSADKRFRAAVRREMAKAGLA*
Ga0126381_1001956515	3300010376	Tropical Forest Soil	MATMSSLYRRRTQAHKAVYHFSTNSVRHVVTGFSATRTSPVPSADERFRAAVRREMAK
Ga0126381_1009481012	3300010376	Tropical Forest Soil	MNNIRHGDRSMATMSAARIRSVYRRHTQAHEAVYRYSANPVRHVVTGFSATRATEAPPAPSADERFRADLRREMAKAGLT*
Ga0126381_1010602391	3300010376	Tropical Forest Soil	LFTAEANHYQQNALRRYPMATMSAALIRSLYRRHTQAYEAVYHVSSNSGGHSIAGFSATRTTETSPVLSADERFRAAVRREMAKAGVA*
Ga0126381_1013396962	3300010376	Tropical Forest Soil	MATMSATRIRSLYRRHTQGYEAAYNFSSNSVHQVGTGFSATQATETSPPPSADERFRAAVRREMAKAGLG*
Ga0126381_1015427691	3300010376	Tropical Forest Soil	RSLYRRHTQSYEAVYHSSANSVGHSIAGFSATRTTETLPLPSADEGFRAAVRREMAKAGLD*
Ga0126381_1016656863	3300010376	Tropical Forest Soil	MSSARFRSLYRRRKQADEAVYHFSVNSVGHSIAGFSAARTTETSPVPSADERFRAAVRREMAKAGLA*
Ga0126381_1019925132	3300010376	Tropical Forest Soil	MATMSAGRIRSLYRRRKQAFEAVYHFSANPVGHSITGFSATRTTETSPVPSADERFRAAVRREMAEAGLA*
Ga0126381_1020748211	3300010376	Tropical Forest Soil	MSSARFRSLYRRRKQAYEAVYHFSANSLGHSIAGFPATRTTEASPVLSADEPFRAAVRRDRAQAGLA*
Ga0126381_1024650011	3300010376	Tropical Forest Soil	MNKNREGDYSMATMPSARFRSLYRRRKQAYEAIYHFSANPVRQVVTGFSAARATETSPPPSADERFRAAVRREMAKAGLA*
Ga0126381_1029568861	3300010376	Tropical Forest Soil	MSSARFRSLYRRRNQAYEAVYHFSANSVGHSIAGTSAARATEASPALSADERFRAALRREMEKAGLA*
Ga0126381_1033081311	3300010376	Tropical Forest Soil	MSAVRIRSLYRRRKQAYEAVYHFSANLSGHFTAGFSATRTTETSPVPSAEDRFRSALRREMAKAGLA*
Ga0126381_1040382041	3300010376	Tropical Forest Soil	MTTMSSARFRSLYRRRKQAHEAVYHFSTNSVRQVVTGFSATRATEASPTPSADERFRAALRREMAKAGLA*
Ga0126383_107491591	3300010398	Tropical Forest Soil	MATMSATRIRSLYRRHTQSYEAVYHSSANSVGHSIAGFSATRTTETLPLPSADEGFRAAVRREMAKAGLD*
Ga0126383_116458031	3300010398	Tropical Forest Soil	MSAARIRSLSRRRKQAYEAVYHFSANSVGHSIAWFSATRATEASPAPSADERFRAALRREMANAELVWYGVFRPRSVAETW*
Ga0182036_105025861	3300016270	Soil	METISSARFRSLCRRHTQAYEAVYHFSTNSVRHVVTGFSATRATEASQAPSADERFRAALRHEMAKAGLA
Ga0182041_106898801	3300016294	Soil	ARFRSLYRRRKQAYEAVYHFSANSVGHSVAGFSATRTTETSPVPSADGLFRAAVRREMAKAGLA
Ga0182041_109736731	3300016294	Soil	MATMSADRIRSLCRRHTQAHEAVCHFSANPVRQVVTAFPTARATNASPAPSADERFRAALRREMATAGLA
Ga0182035_101267493	3300016341	Soil	MATMSADRIRSLCRRHTQAYEAVYHFSTNSVRHVVTGFSATRATEASQAPSADERFRAALRHEMAKAGLA
Ga0182035_109943422	3300016341	Soil	MSSARFRSLYRRHKQAYEAVYHFSVNSVGHSTPRFSATRTTETSPVPSADARFRAAVRREMAKTGLA
Ga0182032_106333391	3300016357	Soil	RIRSLYRRHTQVHKAAYHFSTNSVRHVVTGFSATRTIETSPAPSADEHFRAALRREMAKAGLA
Ga0182032_115705521	3300016357	Soil	MATMSSARFRSLYRRRTQAHEVVYHFSTNSVRHVVTGFSITRATEASPAPSPDERFRAALRREMAKAGLA
Ga0182034_100929901	3300016371	Soil	PPNPKETALAMSAARIRSLYPRSTEAHEAVYHFSTNSVRHIVTGFSATRATEASSAPSADECFRAALRREMAKAGLT
Ga0182040_105113353	3300016387	Soil	MATMSATRIRSLYRRHTQAHKAAYHFSTNSVRHVVTGFSATRTIETSPAHSADEHFRAALRREMAKAGLA
Ga0182037_114247741	3300016404	Soil	TMSATRIRSLYRRHTQVHKAAYHFSTNSVRHVVTGFSATRTIETSPAPSADEHFRAALRREMAKAGLA
Ga0182037_120406661	3300016404	Soil	MATMSAARIRSLCRRHHHAPEAVYHFSANPVQHVVTGFSPTRATETSPSPSADERFRA
Ga0182039_101210724	3300016422	Soil	MATMSAARIRCLCRRHNHAHEAVYHFSANPVQQAVSGFSPTRATETSPARSADERFRAVLRREMANAALT
Ga0182039_104107432	3300016422	Soil	MATMSSARFRSLYRRRKQAYEAVYHFSANSVRQVVTGFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0182039_112325652	3300016422	Soil	SLYRRHKHAHEAVYHFSMNSVRHVVAGFSATRATEASPAPSADERFRAALRREMATAGLA
Ga0182038_102397301	3300016445	Soil	MATMSSARFRSLYRRRKQAYEAVYHFSSNSVPQVGTGFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0126371_127965821	3300021560	Tropical Forest Soil	MATMSATRIRSLCRRHTRAHEAVYQFSANSVQHVVTGFSATRATEASPAPSADERF
Ga0318516_108432082	3300031543	Soil	MATMSSARFRSLYRRHKQAYEAVYHFSANSVGHSTARFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0318534_104227171	3300031544	Soil	MATMSSARFRSLYRRHKQAYEAVYHFSANSVGHSIARFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0318541_102346331	3300031545	Soil	MATMSAARIRSLCRRHHHAPEAVYHFSANPVQHVVTGFSPTRATETSPSPSADERFRAALRREMAKAGLT
Ga0318541_103728852	3300031545	Soil	HKSQGDARMATMSAARIRCLCRRHNHAHEAVYHFSANPVQQAVSGFSPTRATETSPARSADERFRAVLRREMANAGLT
Ga0318541_104837412	3300031545	Soil	MASMSAARIRSLYRRHTQAYEAVYNFSSNSVRQVVTGFSAARTTETSPVPSADERFRAALRREMAKAGLA
Ga0318541_104864572	3300031545	Soil	MATMSSARFRSLYRRHKQAYEAVYHFSANSVGHSTARFSATRTTETSPLPSADERFRAAVRREMAKAGLA
Ga0318541_105374372	3300031545	Soil	MATMSAARIRSLYCRRKQAYEAVYHFSANSAGHSIAGFSATRTTETWPVPSADERFRVAVRREMAKAGLA
Ga0310915_101354553	3300031573	Soil	MATMSAARIRSLYCRRNQAYEAVYHFSANPVRQVVTGFSAARATATSPVPSADERFRAALRREMAKAGLA
Ga0310915_108474301	3300031573	Soil	MATMSAARIRSLCRRHHHAPEAVYHFSANPVQHVVTGFSPTRATETSPSPSADERFRAALRREMAKAGLA
Ga0310915_108661582	3300031573	Soil	SLYRRRKQAYEAVYHFSSNSVPQVGTGFSATRTTETSPVPSADERFRAAVHRGMAKAGLA
Ga0310915_112175152	3300031573	Soil	MAMSAARIRSLYRRSTEAHEAVYHFSTNSVRHIVTGFSATRATEASSAPSADECFRAALRREMAKAGLT
Ga0318542_105837571	3300031668	Soil	SFSPETEITMNKIRQGGYPMATMSSARFRSLYRRRKQAYEAVYHFSANSVGHSIAGFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0318561_103553341	3300031679	Soil	MATMSSARFRSLYRRHKQAYEAVYHFSANSVGHSVAGFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0306917_103372532	3300031719	Soil	MATMSADRIRSLCRRHTQAHEAVCHFSANPVRQVVTAFPTARATNASPAPSADERFRAAVRREMAKAGLA
Ga0306917_106602251	3300031719	Soil	MATMSSARFRSLYRRRKQAYEAVYHFSANSVGHSIAGFSATRTTETSPVPSADGRFRAAVRREMAKAGLA
Ga0306917_107556021	3300031719	Soil	MATMSAARIRSLYRRHNHAHEAVYHFSANPVQQAVSGFSPTRATETSPARSADERFRAVLRREMANAGLT
Ga0306917_107960692	3300031719	Soil	MATMSSARFRSLYRRHKQAYEAVYHFSANSVGHSIARFSATRTTETSPLPSADERFRAAVRREMAKAGLA
Ga0318500_107156821	3300031724	Soil	MATMSSARFRSLYRRRKQAYEAVYHFSANPVRQVVTVFSAARATETSPPPSADERFRAAVRREMAKAGLA
Ga0306918_104152602	3300031744	Soil	MATMSSARFRSLYRRHKQAYEAVYHFSVNSVGHSIARFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0306918_105930431	3300031744	Soil	MATMSSARFRSLYRRRKQAYEAVYHFSSNSVPQVGTGFSATRTTETSPVPSADERFRAAVHRGMAKAGLA
Ga0306918_107287861	3300031744	Soil	MATMSAARFRSLYRRHNQAHEAVYHFSANPVGHSIAEFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0318494_109307051	3300031751	Soil	MNKIRQGDYPMATMSSARFRSLYRRRKQAYEAVYHFSANPVRQVVTVFSAARATETSPPPSADERFRAAVRREMAKAGLA
Ga0318535_102565562	3300031764	Soil	MATMSSARFRSLYRRHKQAYEAVYHFSANSVRQVVTGFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0318509_101487512	3300031768	Soil	MATMSSARFRSLYRRHKQAYEAVYHFSVNSVGHSIARFSATRTTETSPLPSADERFRAAVRREMAKAGLA
Ga0318509_107995982	3300031768	Soil	MATISSARFRSLCRRHTQAYEAVYHFSTNSVRHVVTGFSATRTIETSPAPSADEHFRAALRREMAKAGLA
Ga0318543_104145452	3300031777	Soil	MSSARFRSLYRRRKQAYEAVYHFSANSVGHSNAGFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0318508_11911581	3300031780	Soil	MATMSSARFRSLYRRRKQAYEAVYHFSANSVGHSTARFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0310917_106546082	3300031833	Soil	MATMSADRIRSLCRRHTQAHEAVCHFSANPVRQVVTAFPTARATNASPAPSADERFRAAVRRE
Ga0310917_108672652	3300031833	Soil	SARFRSLYRRRKQAYEAVYHFSANSVRQVVTGFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0306919_103219003	3300031879	Soil	MATMSAARIHSMYRRHTHAHEAVYRFSANPVGHSIAGFSATRTTETSPVPSADERFRAAIRREIAKAGLA
Ga0306919_104961552	3300031879	Soil	MATISSARFRSLCRRHTQAYEAVYHFSTNSVRHVVTGFSATRATEASQAPSADERFRAALRHEMAKAGLA
Ga0306919_108722291	3300031879	Soil	MATMSSARFRSLYRRRKQAYEAVYHFSANSVGHSVAGFSATRTTETSPVPSADGLFRAAVRREMAKAGLT
Ga0306919_109367081	3300031879	Soil	MAMSAARIRSLYRRSTEAHEAVYHFSTNSVRHIVTGFSATRATEASSAPSADECFRAALRCEMAKAGLT
Ga0306919_112684202	3300031879	Soil	SLYRRHKQAYEAVYHFSVNSVGHSIARFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0306925_101006392	3300031890	Soil	MATMSATRIRSLYRRHTQVHKAAYHFSTNSVRHVVTGFSATRTIETSPAPSADEHFRAALRREMAKAGLA
Ga0306925_102562661	3300031890	Soil	MATISSARFRSLCRRHTQAYEAVYHFSTNSVRHVVTGFSATRATEASQAPSADERFRSALRREMAKA
Ga0306925_112076301	3300031890	Soil	MATMSAARIRSLYCRRKQAYEAVYHFSANSAGHSIAGFSATRTTETWPVPSADERFRV
Ga0318551_108796832	3300031896	Soil	IRSLYCRRKQAYEAVYHFSANSAGHSIAGFSATRTTETWPVPSADERFRVAVRREMAKAGLA
Ga0306923_100180013	3300031910	Soil	MATMSAARIRCLCRRHNHAHEAVYHFSANPVQQAVSGFSPTRATETSPARSADERFRAVLRREMANAGLT
Ga0306923_101370251	3300031910	Soil	MATMSSARFRSLYRRHKQAYEAVYHFSANSVGHSIARFSATRTTETSPLPSADERFRAAV
Ga0306923_104450842	3300031910	Soil	MSSARFRSLYRRHKQAYEAVYHFSVNSVGHSTPRFSATRTTETSPVPSADERFRAAVRREMAKTGLA
Ga0306923_116686651	3300031910	Soil	MATMSAARIRSLYCRRKQAYEAVYHFSANSAGHSIAGFSATRTTETWPVPSADERFRVAVRR
Ga0306921_100316487	3300031912	Soil	MATMSSARFRSLYRRRKQAYEAVYHFSSNSVPQVGTGFSATRTTETLPVPSADERFRAAVHRGMAKAGLA
Ga0306921_101247735	3300031912	Soil	MATMSSARFRSLYRRRTQAHEAVYHFSANSVGHCIAGFSATRTTETWPVPSADERFRAAVRREMAKAGLA
Ga0306921_106289861	3300031912	Soil	MATMSSARFRSLYRRRRQAYEAVYHFSANPVRQVVTGFLAARATETSPPPSADERFRAALRREMAKAGLA
Ga0310912_102955581	3300031941	Soil	MATMSSARFRSLYRRRKQAYEAVYHFSANSVGHSIARFSATRTTETSPLPSADERFRAAVRREMAKAGLA
Ga0310916_100159102	3300031942	Soil	MSAARIRSLYRRHKHAHEAVYHFSMNSVRHVVAGFSATRATEASPAPSADERFRAALRREMAKAGLA
Ga0310916_103834491	3300031942	Soil	ITMNKIRQGDYPMATMSSARFRSLYRRRKQAYEAVYHFSSNSVPQVGTGFSATRTTETSPVPSADERFRAAVHRGMAKAGLA
Ga0310910_103916721	3300031946	Soil	HLSSFSRETEITMNKIRQGDYPMATMSAARFRSLYRRHNQAHEAVYHFSANPVGHSIAEFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0310910_105697152	3300031946	Soil	MNKIRQGDYAMATMSSARFRSLYRRRKQAYEAVYHFSANSVGHSVAGFSATRTTETSPVPSADGLFRAAVRREMAKAGLT
Ga0310909_103745942	3300031947	Soil	MATMSSARFRSLYRRRKQAYEAVYHFSANPVRQVVTGFSAARATATSPVPSADERFRAALRREMAKAGLA
Ga0310909_104650301	3300031947	Soil	MATMSSARFRSLYRRHKQAYEAVYHFSVNSVGHSTPRFSATRTTETSPVPSADERFRAAVRREMAKTGLA
Ga0310909_105743012	3300031947	Soil	MATMSAARIRSLYCRRKQAYEAVCDFSSNSVPQVGTGFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0306926_100127886	3300031954	Soil	MATISAARIRCLCRRHNHAHEAVYHFSANPVQQAVSGFSPTRATETSPARSADERFRAVLRREMANAGLT
Ga0306926_113724142	3300031954	Soil	VVFPGDRDRMHKIRQGDYPMATMSSARFRSLYRRRKQAYEAVYHFSSNSVPQVGTGFSATRTTETSPVPSADERFRAAVHRGMAKAGLA
Ga0306926_115094721	3300031954	Soil	MASMSSARFRSLYRRRTQAYEAVYHFSANSGHQSANGFSAARATETSSELSADERFRAAIRREMAKAGLA
Ga0318575_106143081	3300032055	Soil	MATMSSARFRSLYRRRKQAYEAVYHFSANSVGHSIAGFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0318533_106208792	3300032059	Soil	SAARIRCLCRRHNHAHEAVYHFSANPVQQAVSGFSPTRATETSPARSADERFRAVLRREMANAGLT
Ga0318504_105904252	3300032063	Soil	MNKIRQGGYPMATMSSARFRSLYRRHKQAYEAVYHFSANSVGHSTARFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0318514_102402321	3300032066	Soil	MATMSSARFRSLYRRRKQAYEAVYHFSANSVGHSIAQFSATRTTETSPVPSADERFRAAVRREMAKAGLA
Ga0318524_102305661	3300032067	Soil	MATMSSARFRSLYRRRKQAYEAVYHFSANPVRQVVTGFSAARTTETSPVPSADERFRAAVRREMAKAGLA
Ga0306920_1006599572	3300032261	Soil	MSSARFRSLYRRRTQAHEAVYHFSANSVGHCIAGFSATRTTETWPVPSADERFRAAVRREMAKAGLA
Ga0306920_1013856572	3300032261	Soil	MSAARIRSLYRRHKHAHEAVYHFSMNSVRHVVAGFSATRATEASPAPSADERFRAALRREMA
Ga0306920_1018104081	3300032261	Soil	MATMSAARIRSLYCRRKQAYEAVYHFSANSAGHSIAGFSATRTTETWPVPSADERFRVAVRREMA
Ga0335079_102006962	3300032783	Soil	MATMSAARIRSMFRRHNQAHEAFYHFCANSVRQAATSLSAARAIESSPAPSADERFRAALRRELAKASLT
Ga0335078_101572223	3300032805	Soil	MATMSAARIRSMFRRHNQAHEAVYHFCANSVRQAATSLSAARAIESSPAPSADERFRAALRRELAKASLT
Ga0335081_102583533	3300032892	Soil	MATMSAARIRSMFRRHNQAHEAVYHFCANSVRQAATSLSAARAIESSPAPSADERFRAALRREL
Ga0335069_101662504	3300032893	Soil	MATMSAARIRSMYRRHNQAHEAVYHFCANSIRQAATSLSAARAIESSPAPSADERFRAALRRELAKASLT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088062

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences