Metagenome / Metatranscriptome Family F088421

Basic Information
Family ID	F088421
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	117 residues
Representative Sequence	MRKVIVILLFAAFAVVGLASHNAVVNGQEKPAASAKLVRWDGHIVRVDNDNSFMDVRNSAGVMKRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGKVDEKGGYTATRIDLRIHP
Number of Associated Samples	72
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.98 %
% of genes near scaffold ends (potentially truncated)	22.94 %
% of genes from short scaffolds (< 2000 bps)	65.14 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Most Common Taxonomy
Group	Bacteria (52.294 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (37.615 % of family members)
Environment Ontology (ENVO)	Unclassified (85.321 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.385 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 10.42% β-sheet: 31.25% Coil/Unstructured: 58.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00027	cNMP_binding	4.63
PF13646	HEAT_2	2.78
PF00069	Pkinase	2.78
PF01471	PG_binding_1	1.85
PF17191	RecG_wedge	0.93
PF00873	ACR_tran	0.93
PF00149	Metallophos	0.93
PF02065	Melibiase	0.93
PF08281	Sigma70_r4_2	0.93
PF03167	UDG	0.93
PF13620	CarboxypepD_reg	0.93
PF04972	BON	0.93
PF00271	Helicase_C	0.93
PF01883	FeS_assembly_P	0.93
PF13414	TPR_11	0.93
PF03899	ATP-synt_I	0.93
PF07719	TPR_2	0.93
PF13520	AA_permease_2	0.93
PF08240	ADH_N	0.93
PF08501	Shikimate_dh_N	0.93
PF04014	MazE_antitoxin	0.93
PF07517	SecA_DEAD	0.93
PF10771	DUF2582	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	11.11
COG0169	Shikimate 5-dehydrogenase	Amino acid transport and metabolism [E]	0.93
COG0653	Preprotein translocase subunit SecA (ATPase, RNA helicase)	Intracellular trafficking, secretion, and vesicular transport [U]	0.93
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.93
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.93
COG3312	FoF1-type ATP synthase accessory protein AtpI	Energy production and conversion [C]	0.93
COG3345	Alpha-galactosidase	Carbohydrate transport and metabolism [G]	0.93
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.29 %
Unclassified	root	N/A	47.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.29 %
Unclassified	root	N/A	47.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.29 %
Unclassified	root	N/A	47.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	19.27 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.27 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.83 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.27 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.83 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10017825	All Organisms → cellular organisms → Bacteria	4471	Open in IMG/M
3300001356\|JGI12269J14319_10007509	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	9287	Open in IMG/M
3300004295\|Ga0068932_1269201	Not Available	657	Open in IMG/M
3300004295\|Ga0068932_1328810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300004401\|Ga0068980_1156894	Not Available	675	Open in IMG/M
3300004475\|Ga0068969_1390063	Not Available	556	Open in IMG/M
3300004477\|Ga0068971_1575115	Not Available	532	Open in IMG/M
3300004558\|Ga0068979_1125418	Not Available	571	Open in IMG/M
3300004598\|Ga0068975_1211458	Not Available	536	Open in IMG/M
3300004605\|Ga0068952_1316690	Not Available	766	Open in IMG/M
3300004609\|Ga0068958_1241463	Not Available	545	Open in IMG/M
3300004612\|Ga0068961_1291627	Not Available	677	Open in IMG/M
3300004619\|Ga0068953_1330140	Not Available	514	Open in IMG/M
3300004973\|Ga0072322_1253987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300004973\|Ga0072322_1258961	Not Available	500	Open in IMG/M
3300006860\|Ga0063829_1443004	Not Available	658	Open in IMG/M
3300009518\|Ga0116128_1000071	All Organisms → cellular organisms → Bacteria	79031	Open in IMG/M
3300009522\|Ga0116218_1277675	Not Available	751	Open in IMG/M
3300009522\|Ga0116218_1305441	Not Available	712	Open in IMG/M
3300009614\|Ga0116104_1008897	All Organisms → cellular organisms → Bacteria → Acidobacteria	3322	Open in IMG/M
3300009630\|Ga0116114_1015059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2403	Open in IMG/M
3300009630\|Ga0116114_1034003	Not Available	1483	Open in IMG/M
3300009632\|Ga0116102_1036764	All Organisms → cellular organisms → Bacteria → Acidobacteria	1603	Open in IMG/M
3300009640\|Ga0116126_1063508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1400	Open in IMG/M
3300009839\|Ga0116223_10047069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2833	Open in IMG/M
3300010379\|Ga0136449_100030544	All Organisms → cellular organisms → Bacteria	13059	Open in IMG/M
3300010379\|Ga0136449_100669309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1749	Open in IMG/M
3300010379\|Ga0136449_102340071	Not Available	773	Open in IMG/M
3300011042\|Ga0138586_146937	Not Available	571	Open in IMG/M
3300011051\|Ga0138540_100430	Not Available	587	Open in IMG/M
3300011056\|Ga0138538_1070918	Not Available	731	Open in IMG/M
3300011056\|Ga0138538_1087466	Not Available	505	Open in IMG/M
3300011058\|Ga0138541_1056191	Not Available	618	Open in IMG/M
3300011059\|Ga0138597_1106015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	964	Open in IMG/M
3300011065\|Ga0138533_1089653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300011070\|Ga0138567_1150974	Not Available	540	Open in IMG/M
3300011071\|Ga0138595_1114152	Not Available	528	Open in IMG/M
3300011072\|Ga0138563_1041621	Not Available	654	Open in IMG/M
3300011078\|Ga0138565_1116686	Not Available	555	Open in IMG/M
3300011079\|Ga0138569_1017333	Not Available	505	Open in IMG/M
3300011108\|Ga0138601_112565	Not Available	680	Open in IMG/M
3300011109\|Ga0138539_1007862	Not Available	701	Open in IMG/M
3300014152\|Ga0181533_1031417	All Organisms → cellular organisms → Bacteria	3074	Open in IMG/M
3300014152\|Ga0181533_1126451	Not Available	1084	Open in IMG/M
3300014156\|Ga0181518_10193469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1062	Open in IMG/M
3300016730\|Ga0181515_1075733	Not Available	740	Open in IMG/M
3300016750\|Ga0181505_10327189	Not Available	566	Open in IMG/M
3300017822\|Ga0187802_10149044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300017823\|Ga0187818_10160420	All Organisms → cellular organisms → Bacteria → Acidobacteria	979	Open in IMG/M
3300017823\|Ga0187818_10410341	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300017925\|Ga0187856_1136507	Not Available	937	Open in IMG/M
3300017929\|Ga0187849_1000244	All Organisms → cellular organisms → Bacteria	79017	Open in IMG/M
3300017933\|Ga0187801_10100855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1096	Open in IMG/M
3300017935\|Ga0187848_10009122	All Organisms → cellular organisms → Bacteria → Acidobacteria	5933	Open in IMG/M
3300017942\|Ga0187808_10001556	All Organisms → cellular organisms → Bacteria	8177	Open in IMG/M
3300017943\|Ga0187819_10018601	All Organisms → cellular organisms → Bacteria	4018	Open in IMG/M
3300017955\|Ga0187817_10538468	Not Available	745	Open in IMG/M
3300017972\|Ga0187781_10002923	All Organisms → cellular organisms → Bacteria	12943	Open in IMG/M
3300017972\|Ga0187781_10436530	Not Available	937	Open in IMG/M
3300017972\|Ga0187781_10475968	Not Available	895	Open in IMG/M
3300017972\|Ga0187781_10621442	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300017975\|Ga0187782_10004971	All Organisms → cellular organisms → Bacteria → Acidobacteria	9914	Open in IMG/M
3300017975\|Ga0187782_10043427	All Organisms → cellular organisms → Bacteria → Acidobacteria	3272	Open in IMG/M
3300017975\|Ga0187782_10381951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1069	Open in IMG/M
3300017975\|Ga0187782_11481522	Not Available	534	Open in IMG/M
3300017995\|Ga0187816_10032770	All Organisms → cellular organisms → Bacteria → Acidobacteria	2115	Open in IMG/M
3300018006\|Ga0187804_10416184	Not Available	597	Open in IMG/M
3300018009\|Ga0187884_10045898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2067	Open in IMG/M
3300018062\|Ga0187784_10103205	All Organisms → cellular organisms → Bacteria → Acidobacteria	2321	Open in IMG/M
3300018086\|Ga0187769_10077878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2350	Open in IMG/M
3300018088\|Ga0187771_10003782	All Organisms → cellular organisms → Bacteria → Acidobacteria	10618	Open in IMG/M
3300018088\|Ga0187771_10044192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3447	Open in IMG/M
3300018090\|Ga0187770_10021805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4352	Open in IMG/M
3300018090\|Ga0187770_10122248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1963	Open in IMG/M
3300018090\|Ga0187770_10283081	All Organisms → cellular organisms → Bacteria → Acidobacteria	1288	Open in IMG/M
3300018090\|Ga0187770_10283081	All Organisms → cellular organisms → Bacteria → Acidobacteria	1288	Open in IMG/M
3300019245\|Ga0187791_1156662	Not Available	620	Open in IMG/M
3300019264\|Ga0187796_1178049	Not Available	952	Open in IMG/M
3300019265\|Ga0187792_1208811	Not Available	679	Open in IMG/M
3300019273\|Ga0187794_1748417	Not Available	1078	Open in IMG/M
3300019275\|Ga0187798_1775945	Not Available	676	Open in IMG/M
3300019278\|Ga0187800_1038086	Not Available	510	Open in IMG/M
3300019278\|Ga0187800_1143368	Not Available	867	Open in IMG/M
3300019278\|Ga0187800_1428041	Not Available	663	Open in IMG/M
3300019278\|Ga0187800_1618565	Not Available	546	Open in IMG/M
3300019284\|Ga0187797_1521867	Not Available	711	Open in IMG/M
3300019284\|Ga0187797_1548111	Not Available	578	Open in IMG/M
3300027854\|Ga0209517_10004737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17708	Open in IMG/M
3300027854\|Ga0209517_10013290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8601	Open in IMG/M
3300027854\|Ga0209517_10034681	All Organisms → cellular organisms → Bacteria → Acidobacteria	4129	Open in IMG/M
3300027854\|Ga0209517_10046078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3360	Open in IMG/M
3300032160\|Ga0311301_10846622	All Organisms → cellular organisms → Bacteria → Acidobacteria	1245	Open in IMG/M
3300032783\|Ga0335079_11848395	Not Available	586	Open in IMG/M
3300032805\|Ga0335078_10141508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3416	Open in IMG/M
3300032892\|Ga0335081_11057307	Not Available	940	Open in IMG/M
3300033402\|Ga0326728_10000342	All Organisms → cellular organisms → Bacteria	188736	Open in IMG/M
3300033402\|Ga0326728_10004202	All Organisms → cellular organisms → Bacteria	43188	Open in IMG/M
3300033402\|Ga0326728_10008909	All Organisms → cellular organisms → Bacteria → Acidobacteria	24506	Open in IMG/M
3300033402\|Ga0326728_10016916	All Organisms → cellular organisms → Bacteria	14749	Open in IMG/M
3300033402\|Ga0326728_10021019	All Organisms → cellular organisms → Bacteria	12343	Open in IMG/M
3300033402\|Ga0326728_10021023	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12341	Open in IMG/M
3300033402\|Ga0326728_10205411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1973	Open in IMG/M
3300033977\|Ga0314861_0000216	All Organisms → cellular organisms → Bacteria	99874	Open in IMG/M
3300033977\|Ga0314861_0000667	All Organisms → cellular organisms → Bacteria	51367	Open in IMG/M
3300033977\|Ga0314861_0001011	All Organisms → cellular organisms → Bacteria	39568	Open in IMG/M
3300033977\|Ga0314861_0002342	All Organisms → cellular organisms → Bacteria → Acidobacteria	20406	Open in IMG/M
3300033977\|Ga0314861_0016392	Not Available	4874	Open in IMG/M
3300033977\|Ga0314861_0076882	Not Available	1759	Open in IMG/M
3300034091\|Ga0326724_0126245	All Organisms → cellular organisms → Bacteria → Acidobacteria	1626	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.98%
Aquatic	Environmental → Aquatic	22.02%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.64%
Freshwater	Environmental → Aquatic → Freshwater	22.02%
Peat	Environmental → Terrestrial → Peat	7.34%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	33.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.02%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.34%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	33.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.26%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	8.26%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.34%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.50%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	37.61%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	15.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	14.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	8.26%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	7.34%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004295	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004401	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 77 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004475	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004477	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004558	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 76 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004598	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 72 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004605	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 40 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004609	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 50 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004612	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004619	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 45 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004973	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 19 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006860	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009614	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011042	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 76 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011051	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 21 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011056	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 16 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011058	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 22 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011059	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 44 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011065	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 11 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011070	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 52 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011071	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 42 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011072	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 48 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011078	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 50 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011079	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 54 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011108	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 77 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011109	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 18 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019245	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019264	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019265	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019273	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100178254	3300000567	Peatlands Soil	MRKVIVILLFSVFAVVGLAPHNAIANGQEKAAAGPKQARWEGRIVLIGNDASFMDVRNSANIVKRIHWDSSTTWTKVNKPIADHSEFKEGKRVICLGKYDEKGEFNATRIDLRVHP*
JGI12269J14319_1000750911	3300001356	Peatlands Soil	MRKVIVILLFSVFAVVGLAPHNAIANGQEKAAAGPKQARWEGRIVLIGNDASFMDVRNSANIVKRIHWDSSTTWTKVNKPIADHSEFKEGKRVICLGKYDEK
Ga0068932_12692011	3300004295	Peatlands Soil	TMRKVMVILLFAAMAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDNMFMDVRNSANIVKRIHWDSSTTWTKVNKPIADHSEFKEGKRVICLGKYDEKGEFNATRIDLRVHP*
Ga0068932_13288101	3300004295	Peatlands Soil	MRKVIVIPLFVVFAMVGLASHSAVLNGQEKAAASAKEIRWDGHIVRIDNDNMYMDVRDKNGQTRRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTADKKGKYTATRIDLRVHLNP*
Ga0068980_11568941	3300004401	Peatlands Soil	MRKVMVILLFAAMAVVGLASHNTVVNGQEKPAAAAQSVRWDGHIVRIDNDNMYMDVRDKDGQSRRIHWNSSTLWTKLNKKVADHSEFKEEERVICLGTADKKGKYTATRIDLRVHLNP*
Ga0068969_13900631	3300004475	Peatlands Soil	MRKVMVILLFAAIAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDSMFMDVRNSAGVVKRIHWDSSTMWSKLNKKVEDHSDFKQDERVICLGKADEKGAYTATRIDLRIHP*
Ga0068971_15751151	3300004477	Peatlands Soil	TMRKVMVILLFAAIAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDNMFMDVRNSAGIIKRIHWDSSTLWTKLNKKVEDHSEFKQEERVICLGKADEKGAYTATRIDLRIHP*
Ga0068979_11254181	3300004558	Peatlands Soil	KLRRPRARRPDAELKENSMRKVIVIPLFVVFAMVGLASHSAVLNGQEKAAASAKEIRWDGHIVRIDNDNMYMDVRDKNGQTRRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTADKKGKYTATRIDLRVHLNP*
Ga0068975_12114581	3300004598	Peatlands Soil	ENSMRKVIVIPLFVVFAMVGLASHSAVLNGQEKAAASAKEIRWDGHIVRIDNDNMYMDVRDKNGQTRRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTADKKGKYTATRIDLRVHLNP*
Ga0068952_13166901	3300004605	Peatlands Soil	MRKVMVILLFAAMAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDNMFMDVRNSAGIIKRIHWDSSTLWTKLNKKVEDHSEFKQEERVICLGKADEKGAYTATRIDLRIHP*
Ga0068958_12414631	3300004609	Peatlands Soil	MRKVMVILLFAAMAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDSMFMDVRNSAGVIKRIHWDSSTLWTKLNKKVEDHSEFKQEERVICLGKADEKGAYTATRIDLRIHP*
Ga0068961_12916271	3300004612	Peatlands Soil	MRKVMVILLFAAIAVVGLASHNTVVNGQEKPAAAAQSVRWEGHIVRIDNDNMYMDVRDKNGQTRRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTADKKGKYTATRIDLRVHLNP*
Ga0068953_13301401	3300004619	Peatlands Soil	REITMRKVMVILLFAAIAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDNMFMDVRNSAGIIKRIHWDSSTLWTKLNKKVEDHSEFKQEERVICLGKADEKGAYTATRIDLRIHP
Ga0072322_12539872	3300004973	Peatlands Soil	LRRPRARRPDAELKENSMRKVIVIPLFVVFAMVGLASHSAVLNGQEKAAASAKEIRWDGHIVRIDNDNMYMDVRDKNGQTRRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTADKKGKYTATRIDLRVHLNP*
Ga0072322_12589611	3300004973	Peatlands Soil	MRKVMVILLFAAIAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDNMFMDVRNSAGIIKRIHWDSSTLWTKLNKKVEDHSEFKQEERVICLGKADEKGAYIATRIDLRIHP*
Ga0063829_14430041	3300006860	Peatlands Soil	MRKVMVILLFAAMAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDNMFMDVRNSAGIIKRIHWDSSTLWSKLNKKVEDHSDFKQEERVICLGKADEKGAYTATRIDLRIHP*
Ga0116128_100007138	3300009518	Peatland	MLLFAVLAVVGLATQNAVANGQEKTAAAAKQARWDGHIVRIDKDASRMDVRNAKGVEKRIHWTSSTSWTRLNKPVTDQSMFKEEERVICLGTYDEKGEFIASRIDLRVHP*
Ga0116218_12776751	3300009522	Peatlands Soil	MRKVIVIPLFVVFAMVGLASHNAVLNGQEKAAASAKEIRWDGHIVRIDNDNMYMDVRDKNGQTRRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTADKKGKYTATRIDLRVHLNP*
Ga0116218_13054411	3300009522	Peatlands Soil	VFAVVGLAPHNAIANGQEKAAAGPKQARWEGRIVLIGNDASFMDVRNSANIVKRIHWDSSTTWTKVNKPIADHSEFKEGKRVICLGKYDEKGEFNATRIDLRVHP*
Ga0116104_10088973	3300009614	Peatland	MRKVVVMLLFAVLAVVGLATQNAVANGQEKTAAAAKQARWDGHIVRIDKDASRMDVRNAKGVEKRIHWTSSTSWTRLNKPVTDQSMFKEEERVICLGTYDEKGEFIASRIDLRVHP*
Ga0116114_10150594	3300009630	Peatland	MRKVMVILLFAAIAVAGLASHNAVVNGQEKPAAAAKSVRWDGHIVRIDNDNMYMDVRDKDGQTKRIHWNSSTLWTKVNKKVADHNDFKEEERVICLGTVDKKGEYTASRIDLRVHLNP*
Ga0116114_10340033	3300009630	Peatland	MRKVMVILLFAAIAVVGLASHNTVVNGQEKPAAAAKSVRWDGHIVRIDNDNMYMDVRDKDGQTKRIHWDSSTLWSKLNKKVEDHSDFKQEERVICLGKADEKGAYTATRIDLRIHP*
Ga0116102_10367642	3300009632	Peatland	MRKVMVILLFAAIAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDNMFMDVRNSAGVVKRIHWDSSTLWSKLNKKVEDHSDFKQEERVICLGKADEKGAYTATRIDLRIHP*
Ga0116126_10635081	3300009640	Peatland	TMRKVMVILLFAAIAVAGLASHNAVVNGQEKPAAAAKSVRWDGHIVRIDNDNMYMDVRDKDGQTKRIHWNSSTLWTKVNKKVADHNDFKEEERVICLGTVDKKGEYTASRIDLRVHLNP*
Ga0116223_100470692	3300009839	Peatlands Soil	MRKVIVILLFSVVAVLGIETHNAIANGQEKAAAGPKQARWEGRIVLIGNDASFMDVRNSANIVKRIHWDSSTTWTKVNKPIADHSEFKEGKRVICLGKYDEKGEFNATRIDLRVHP*
Ga0136449_10003054412	3300010379	Peatlands Soil	MRKVIVILLFSVFAVVGLAPHNAIANGQEKAAAGPKQARWEGRIVLIGNDASFMDVRNSANIVKRIHWDSSTTWTKVNKPVADQSEFKEGKRVICLGKYDEKGEFNATRIDLRVHP*
Ga0136449_1006693092	3300010379	Peatlands Soil	MRKVMVILLFAAMAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDNMFMDVRNSAGVVKRIHWDSSTLWSKLNKKVEDHSDFKQEERVICLGKADEKGAYTATRIDLRIHP*
Ga0136449_1023400711	3300010379	Peatlands Soil	MRQFLVILLFAAIAVVGLASHNAVVNGQEKPAAAAQSVRWDGHIVRIDNDNMYMDVRDKDGQTKRIHWNSSTLWTKVNKKVADHNDFKEEERVICLGTVDKKGEYTASRIDLRVHL
Ga0138586_1469371	3300011042	Peatlands Soil	KLRRPRARRPDAELKENSMRKVIVIPLFVVFAMVGLASHSAVLNGQEKAAASAKEIRWHGHIVRIDNDNMYMDVRDKNGQTRRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTVGKKGEYTASRIDLRVHLNP*
Ga0138540_1004301	3300011051	Peatlands Soil	MRKVIVIPLFVVFAMVGLASHSAVLNGQEKAAASAKEIRWDVHIVRIDNDNMYMDVRDKNGQTRRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTADKKGKYTATRIDLRVHLNP*
Ga0138538_10709181	3300011056	Peatlands Soil	MRKVIVIPLFVVFAMVGLASHSAVLNGQEKAAASAKEIRWDGHIVRIDNDNMYMDVRDKNGQTRRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTADKKRQVHCHPN*
Ga0138538_10874661	3300011056	Peatlands Soil	MRKVMVILLFAAIAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDSMFMDVRNSAGVIKRIHWDSSTLWTKLNKKVEDHSEFKQEERVICLGKADEKGAYTATRIDLRIHP*
Ga0138541_10561911	3300011058	Peatlands Soil	MRKVMVILLFAAIAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDNMFMDVRNSAGVVKRIHWDSSTLWSKLNKKVEDHSDFKQEERVICLGKADEKGAYIATRIDLRIHP*
Ga0138597_11060152	3300011059	Peatlands Soil	AELKENSMRKVIVIPLFVVFAMVGLASHNAVLNGQEKAAASAKEIRWDGHIVRIDNDNMYMDVRDKNGQTRRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTADKKGKYTATRIDLRVHLNP*
Ga0138533_10896531	3300011065	Peatlands Soil	MRKVIVIPLFVVFAMVGLASHSAVLNGQEKAAASAKEIRWDGHIVRIDNDNMYMDVRDKNGQTKRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTADKKGKYTATRIDLRVHLNP*
Ga0138567_11509741	3300011070	Peatlands Soil	MRKVMVILLFAAIAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDNMFMDVRNSAGVVKRIHWDSSTMWSKLNKKVEDHSDFKQDERVICLGKADEKGAYTATRIDLRIHP*
Ga0138595_11141521	3300011071	Peatlands Soil	MRKVMVILLFAAMAVVGLASHNTVVNGQEKPAASVKLVRWDGHIVRVDNDNMFMDVRNSAGIIKRIHWDSSTLWTKLNKKVEDHSEFKQEERVICLGKADEKGAYTATRIDLRIHP*
Ga0138563_10416211	3300011072	Peatlands Soil	MRRVIVVLLFVVFAMVGLASHNAVLNGQEKAAASAKEIRWDGHIVRIDNDNMYMDVRDKNGQTRRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTADKKGKYTATRIDLRVHLNP*
Ga0138565_11166861	3300011078	Peatlands Soil	MVILLFAAMAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDSMFMDVRNSAGVIKRIHWDSSTLWTKLNKKVEDHSEFKQEERVICLGKADEKGAYTATRIDLRIHP*
Ga0138569_10173331	3300011079	Peatlands Soil	MRKVIVIPLFVVFAMVGLASHNAVLNGQEKAAASAKEIRWDGHIVRIDNDNMYMDVRDKNGQTKRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTADKKGKYTATRIDLRVHLNP*
Ga0138601_1125651	3300011108	Peatlands Soil	MRKVIVIPLFVVFAMVGLASHSAVLNGQEKAAASAKEIRWDGHIVRIDNDNMYMDVRDKDGQSRRIHWNSSTLWTKLNKKVADHSEFKEEERVICLGTADKKGKYTATRIDLRVHLNP*
Ga0138539_10078621	3300011109	Peatlands Soil	MRKVMVILLFAAIAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDNMFMDVRNSANIVKRIHWDSSTTWTKVNKPIADHSEFKEGKRVICLGKYDEKGEFNATRIDLRVHP*
Ga0181533_10314172	3300014152	Bog	MRKVIVILLFAAFAVVGLASHNAVVNGQEKPAASAKLVRWDGHIVRVDNDNSFMDVRNSAGVMKRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGKVDEKGGYTATRIDLRIHP*
Ga0181533_11264511	3300014152	Bog	MRQLLVILLFAACAVVGLSTYTSVASGQEKPAAAAKSLRWEGHIVRIDNDNMYMDVRDKNGQTRRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTVDKKGEYTATRIDLRVHLNP*
Ga0181518_101934692	3300014156	Bog	MRKVMVILLFAAIAVVGLASHNTVVNGQEKPAAAAKSVRWDGHIVRIDNDNMYMDVRDKDGQTKRIHWNSSTLWTKVNKKVADHNDFKEEERVICLGTVDKKGEYTASRIDLRVHLNP*
Ga0181515_10757331	3300016730	Peatland	RKLTRSKAHHLEARSREITMRKVMVILLFAAIAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDNMFMDVRNSAGVVKRIHWDSSTLWSKLNKKVEDHSDFKQEERVICLGKADEKGAYTATRIDLRIHP
Ga0181505_103271891	3300016750	Peatland	TMRKVMVILLFAAIAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDNMFMDVRNSAGVVKRIHWDSSTLWSKLNKKVEDHSDFKQEERVICLGKADEKGAYTATRIDLRIHP
Ga0187802_101490441	3300017822	Freshwater Sediment	MRKVIVILLFAAFVFVGLAPQKAFANGQEKAAAAAKQLRWDGHIVRIDSDASYMDVRNSAGTVKRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTAGEKGELNATRIDLRVHP
Ga0187818_101604201	3300017823	Freshwater Sediment	VILLFAAFVFVGLAPQKAFANGQEKAAATAKQLRWDGHIVRIDNDASYMDVRNSAGTVKRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTAGEKGEFNATRIDLRVHP
Ga0187818_104103411	3300017823	Freshwater Sediment	MIIRREARPLDAQSRENTMRKVIVILLFAAFVFVGLAPQKAFANGQEKAAAAAKQLRWDGHIVRIDSDASYMDIRNSAGQVKRIHWDSSTVWTKLNKKVADHSEFKEEERVICLGTAGEKGEFNA
Ga0187856_11365071	3300017925	Peatland	MRKVMVILLFAAIAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDNMFMDVRNSAGVVKRIHWDSSTLWSKLNKKVEDHSDFKQEERVICLGKADEKGAYTATRIDLRIHP
Ga0187849_100024434	3300017929	Peatland	MRKVVVMLLFAVLAVVGLATQNAVANGQEKTAAAAKQARWDGHIVRIDKDASRMDVRNAKGVEKRIHWTSSTSWTRLNKPVTDQSMFKEEERVICLGTYDEKGEFIASRIDLRVHP
Ga0187801_101008552	3300017933	Freshwater Sediment	MRKVIVILLFAAFVFVGLAPQKAFANGQEKAAAAAKQLRWDGHIVRIDNDASYMDVRNSAGTVKRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTAGEKGEFNATRIDL
Ga0187848_100091225	3300017935	Peatland	MRKVMVILLFAAIAVAGLASHNAVVNGQEKPAAAAKSVRWDGHIVRIDNDNMYMDVRDKDGQTKRIHWNSSTLWTKVNKKVADHNDFKEEERVICLGTVDKKGEYTASRIDLRVHLNP
Ga0187808_100015563	3300017942	Freshwater Sediment	MRKVIVILLFAAFVFVGLAPQKAFANGQEKAAAAAKQLRWDGHIVRIDNDASYMDVRNSAGTVKRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTAGEKGEFNATRIDLRVHP
Ga0187819_100186013	3300017943	Freshwater Sediment	MRKVIVILLFAAFVFVGLAPQKAFANGQEKAAATAKQLRWDGHIVRIDNDASYMDVRNSAGTVKRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTAGEKGEFNATRIDLRVHP
Ga0187817_105384681	3300017955	Freshwater Sediment	MRKVIVILLFALLAVAGLAPHNAIANGQQKAAAGPKQGRWEGHIVSIDNDASFMDVRNSAGVVKRIHWDSSTTWTKVNKPVADHSEFKEEKRVICLGKYDEKGAFNATRIDLRVHP
Ga0187781_1000292314	3300017972	Tropical Peatland	MKKVIVILLFAAFAVVGLAATSAVANGQEKPAAAAKQLRWDGHIVRIDNDASYMDVRNSTGQVKRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGNAGEKGAFNATRIDLRVHP
Ga0187781_104365301	3300017972	Tropical Peatland	MRKLVVVLLFAVFAVVSGIANGQQKTTAGPKQHRWEGTIVRVDNDTSYMDVRNVSGQVRKIQWDSSTTWTKLNKPVADHSGFKPDERVICLGTYDEKGAFHATRIDLRLPK
Ga0187781_104759681	3300017972	Tropical Peatland	VRRLSIILLFAVFALVGLNAMANGPQKAAASAKQARWEGTIVRIDNDAAFMDVRNASGQVKRIHWDSSTTWTKLNKPITDRSGFKEEERVICLGKYDDKGGFNATRIDLRLPK
Ga0187781_106214422	3300017972	Tropical Peatland	MRKTLIVLLFATLALVWLAPQKAYASGQEKAAASAKQLRWDGHIVRIDNDASYMDVRDKTGQTKRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTPGEKGEFNATRIDLRVHP
Ga0187782_100049718	3300017975	Tropical Peatland	MRQLLAVLLFAACALVGFSMYTPVASGQEKPAAAAKSIRWDGHIVRIDEQNMYMDVRDKSGQSRRIHWDSSTLWTKLNKKVSDHSEFKEEERVICLGTVDKKGEYTATRIDLRVHP
Ga0187782_100434273	3300017975	Tropical Peatland	MRKASVILLFAAIAAAAFASLALGQQKAASPKQARWEGTIVRIDNDASYMDVRNTSDQQKRIHWDSSTTWTKLNKPITDRSGFKPDERVICLGKYDAKGEFNATRIDLRLPK
Ga0187782_103819512	3300017975	Tropical Peatland	LFAAFVFVGLAPQKAYASGQEKPAASAKQLRWDGHIVRIDNDASYMDVRDRSGQTKRIHWDSSTVWTKLNKKVADHSEFKEEERVICLGTPSEKGEFNATRIDLRVHP
Ga0187782_114815221	3300017975	Tropical Peatland	MRKLVVVLLFVVFAVVSGIANGQQKTTAGPKQHRWEGTIVRVDNDTSYMDVRNVSGQVRKIQWDSSTTWTKLNKPVADHSGFKPDERVICLGTYDEKGAFHATRIDLRLPK
Ga0187816_100327703	3300017995	Freshwater Sediment	MRKVIVILLFAAFVFVGLAPQKAFANGQERAAAAAKQLRWDGHIVRIDSDASYMDVRNSAGTVKRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTAGEKGEFNATRIDLRVHP
Ga0187804_104161841	3300018006	Freshwater Sediment	MRKVIVILLFAAFVCVGLAPQKAFANGQEKAAATAKQLRWDGHIVRIDNDASYMDVRNSAGQTKRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTAGEKGEFNATRIDLRVHP
Ga0187884_100458984	3300018009	Peatland	MKQFLVMLLFAAIAVVGLASHNAVVNGQEKPAAAAQSVRWDGHIVRIDNDNMYMDVRDKDGQTKRIHWNSSTLWTKVNKKVADHNDFKEEERVICLGTVDKKGEYTASRIDLRVHLNP
Ga0187784_101032054	3300018062	Tropical Peatland	MRQLLAVLLFAACALVGFSMYTPVASGQEKPAAAAKSIRWDGHIVRIDEQNMYMDVRDKSGQSRRIHWDGSTLWTKLNKKVSDHSEFKEEERVICLGTVDKKGEYTATRIDLRVHP
Ga0187769_100778782	3300018086	Tropical Peatland	MRKFIVILLFAAFAVVGLAATNVVANGQDKPAAAAKQLRWDGHIVRIDNDASYMDVRNSTGQVKRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGNAGEKGAFNATRIDLRVHP
Ga0187771_1000378210	3300018088	Tropical Peatland	MKKVIVILLFAAFAVVGLVTTNVVANGQEKPAAAAKQLRWDGHIVRIDNDASYMDVRNSAGQVKRVHWDSSTVWTKLNKKVADHSEFKEEERVICLGNAGEKGAFNATRIDLRVHP
Ga0187771_100441922	3300018088	Tropical Peatland	VRKLVVILLFAVFAAVGLATIANGQEKAAAGPKKGRWEGTIVRISSDDSSMDVRNTAGQVRKIHWDSSTTWTKLNKPVADHSEFKEEQRVICLGTYDEKGAFHATRIDLRLPK
Ga0187770_100218053	3300018090	Tropical Peatland	MRKLVVVLLFAVFAAVGLASHSGIANGQQKATAGPKQRRWEGTIVRVDNDTSYMDVRNVSGQVRKIQWDSSTTWTKLNKPVADHSEFKPDERVICLGTYDEKGAFHATRIDLRLPK
Ga0187770_101222482	3300018090	Tropical Peatland	MRKLIVVLLFAIFAVVGLASHSGIANGQQKAAAAPKQHRWEGTIVRVDNDTSYMDVRNVSGQVRKIQWDSSTTWTKLNKPVADHSGFKPDERVICLGTYDEKGAFHATRIDLRLPK
Ga0187770_102830811	3300018090	Tropical Peatland	EARQPDAHTKERTMKKLIVVLLFAAFAVVGLAPHNALATGPQKAAASAKELRWDGHIVRVDNDASFMDVRNAAGQEKRIHWDSSTTWTRLNKPVADHSAFKEGERVICLGKVDDSGAYHASRIDLRVHP
Ga0187770_102830812	3300018090	Tropical Peatland	MLTGPIARQADAQLKEDIVRKLVVILLFAVFAAVGLATIANGQEKAAAGPKKGRWEGTIVRISSDDSYMDVRNTAGQVRKIHWDSSTTWTKLNKPVADHSEFKEEQRVICLGTYDEKGGFHATRIDLRLPK
Ga0187791_11566621	3300019245	Peatland	RILIRPKARHPDAQSKEDIMRKVIVILLFAAFAVVGLAPHNAVANGPQKPAASAKQLRWDGHIVRIDKDASFMDVRNSAGVVKRIHWDSTTTWTKLNKAVPDHSEFKEEQRVICLGKVDEKGAFNATRIDLRVHP
Ga0187796_11780493	3300019264	Peatland	AAFVFVGLAPQKAFANGQEKAAATAKQLRWDGHIVRIDNDASYMDVRDKSGTIKRIHWDSSTVWTKLNKKVADHSEFKEEERVICLGAAGEKGEFNATRIDLRVHP
Ga0187792_12088112	3300019265	Peatland	VLIRPKARHPYAQSKEDIMRKVIVILLFAAFAVVGLAPHNAVANGPQKPAASAKQLRWDGHIVRIDKDASFMDVRNSAGVVKRIHWDSTTTWTKLNKAVPDHSEFKEEQRVICLGKVDEKGAFNATRIDLRVHP
Ga0187794_17484172	3300019273	Peatland	MRKVIVILLFAAFAVVGLVTTNVVANGQEKPAAAAKQLRWDGHIVRIDNDASYMDVRNSAGQVKRVHWDSSTVWTKLNKKVADHSEFKEEERVICLGNAGEKGAFNATRIDLRVHP
Ga0187798_17759451	3300019275	Peatland	MRKTIIVLLFAAFALVGLAPQKAYASGQEKAAASAKQLRWDGHIVRIDNDASYMDVRDKSGTTKRIHWDSSTVWTKLNKKVADHSEFKEEERVICLGTAGEKGEFTATRIDLRVHP
Ga0187800_10380861	3300019278	Peatland	GSIRGDSSTRLRRANFDAQPKENTMRRLLVIMLFAACAVLGLSTYTSVASGQEEKPAAAAKSIRWDGHITRIDTENMYMDVRDKSGQSRRIHWDSATLWTKLNKKVADHSEFKQEERVICLGTVDKKGEYTATRIDLRVHP
Ga0187800_11433682	3300019278	Peatland	MRKAIVFLLFAAFAVAGLGPRNAGASGPQKAAAGAKHARWEGTIVRIDNDASTMDVRNAAGQEKRIRWDSSTTWTKLNKPVADHSEFKEEQRVICL
Ga0187800_14280411	3300019278	Peatland	MRKIIVVLLFAAFALVVLAPQKTYASGQEKAAASAKQLRWDGHIVRIDNDASYMDVRDKSGTTKRIHWDSSTVWTKLNKKVADHSEFKEEERVICLGTAGEKGEFTATRIDLRVHP
Ga0187800_16185651	3300019278	Peatland	MRQLLVILLFAACVLVGFSTYTPVASGQEKPAAAAKSIRWDGHITRIDDQNQYMDVRDKSGQSRRIHWDSSTLWTKLNKKVSEHSEFKEEERVICLGTVDKKGEYTATLIDLRVHP
Ga0187797_15218671	3300019284	Peatland	MRKTIIVLLFAAFALVGLAPQTAYASGQEKAAASAKQLRWDGHIVRIDNDASYMDVRDKSGTTKRIHWDSSTVWTKLNKKVADHSEFKEEERVICLGTAGEKGEFTATRIDLRVHP
Ga0187797_15481111	3300019284	Peatland	MRKFIVILLFAAFAVVGLAATNVVANGQEKPAAAAKQLRWDGHIVRIDNDASYMDVRNSTGQVKRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGNAGEKGAFNATRIDLRVHP
Ga0209517_1000473712	3300027854	Peatlands Soil	MRKVIVIPLFVVFAMVGLASHSAVLNGQEKAAASAKEIRWDGHIVRIDNDNMYMDVRDKNGQTRRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTADKKGKYTATRIDLRVHLNP
Ga0209517_100132902	3300027854	Peatlands Soil	MRKVIVILLFSVFAVVGLAPHNAIANGQEKAAAGPKQARWEGRIVLIGNDASFMDVRNSANIVKRIHWDSSTTWTKVNKPIADHSEFKEGKRVICLGKYDEKGEFNATRIDLRVHP
Ga0209517_100346812	3300027854	Peatlands Soil	MRQFLVILLFAAIAVVGLASHNAVVNGQEKPAAAAQSVRWDGHIVRIDNDNMYMDVRDKDGQSRRIHWNSSTLWTKVNKKVADHSGFKEEERVICLGTVDKKGEYTATRIDLRVHLNP
Ga0209517_100460782	3300027854	Peatlands Soil	MRKVMVILLFAAMAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDNMFMDVRNSAGIIKRIHWDSSTLWTKLNKKVEDHSEFKQEERVICLGKADEKGAYTATRIDLRIHP
Ga0311301_108466221	3300032160	Peatlands Soil	MRKVMVILLFAAMAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDNMFMDVRNSAGVVKRIHWDSSTLWSKLNKKVEDHSDFKQEERVICLGKADEKGAYIATRIDLRIHP
Ga0335079_118483951	3300032783	Soil	VLLFAAFALVVLAPQKTYASGQEKAAASAKQLRWDGHIVRIDNDASYMDVRDKSGTTKRIHWDSSTVWTKLNKKVADHSEFKEEERVICLGTAGEKGEFTATRIDLRVHP
Ga0335078_101415085	3300032805	Soil	MRKTIVVLLFAAFALVVLAPQKTYASGQEKAAASAKQLRWDGHIVRIDNDASYMDVRDKSGTTKRIHWDSSTVWTKLNKKVADHSEFKEEERVICLGTAGEKGEFTATRIDLRVHP
Ga0335081_110573071	3300032892	Soil	MRKAIVILLFAALVVAGLVSHNAVVNGQEKPAASEKLVRWDGHIVRVDNDNMYMDVRNSAGVIKRIHWDSSTLWTKLNKKVEDHSEFKQEERVICLGKVGEKGEYTASRIDLRIHP
Ga0326728_10000342140	3300033402	Peat Soil	MRKVIVILLFAVFAVVGLAANNAVANGQEKTAASAKHLRWSGHIVRIDNENSFMDIRNKAGVEKRIHWDSSTTWTKLNEPVTDHSEFKVDERVICLGKADEKGAFIATRIDLRLPK
Ga0326728_1000420220	3300033402	Peat Soil	MRKVMVILLFAAIAVVGLASHNTVVNGQEKPAASAKLVRWDGHIVRVDNDNMFMDVRNSAGVIKRIHWDSSTLWTKLNKKVEDHSEFKQEERVICLGKADEKGAYTATRIDLRIHP
Ga0326728_100089093	3300033402	Peat Soil	MRKLVVVLLFAVFAVVGLASHSGIANGQQKEAAGPKQHRWEGTIVRVNNDASYIDVRNVSGQVRKIQWDSSTAWTKLNKPVAHHSGFKPDERVICLGTYDEKGAFHATRIDLRLPK
Ga0326728_100169164	3300033402	Peat Soil	MRQFLVVLLFAAIAVVGLASHNAVVNGQEKPAAAAKSLRWEGHIVRIDNDNMYMDVRDKDGQTKRIHWDSSTLWTKLNKKVADHSGFKEEERVICLGTVDKKGEYTASRIDLRVHLNP
Ga0326728_100210195	3300033402	Peat Soil	MRRIIVVLLFATFALVGLTPQKASASGQEKAAASAKQLRWDGHIVRIDNDASFMDVRDRSGQTKRIHWDSSTVWTKLNKKVADHSEFKEEERVICLGAPGEKGEFNATRIDLRVHP
Ga0326728_100210238	3300033402	Peat Soil	MRKVIVILLFSVFAVVGLAPHNAIANGQEKAAAGPKQARWEGHIVLIGNDASFMDVRNSANIVKRIHWDSSTTWTRVNKPVADHSEFKEGKRVICLGKYDEKGEFNATRIDLRVHP
Ga0326728_102054113	3300033402	Peat Soil	MRKVIVVLLFVVFAMVGLASHDAVLNGQEKAAASAKEIRWDGHIVRIDNDGMYMDVRDKNGQTRRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTADKKGEYTATRIDLRVHLNP
Ga0314861_0000216_76217_76633	3300033977	Peatland	MRASPERILTRPIARQPDAQLKEDSVRKPIVILLFAVFTVVGLALIANGQEKAAAGPKKGRWEGTIVRISTDQSYMDVRNTAGQLRKIYWDSSTTWTKLNKPVADHSEFKEEQRVICLGTYDEKGAFHATRIDLRLPK
Ga0314861_0000667_19566_19916	3300033977	Peatland	MRKVIVILLFAVFAVVGLAPHNAVAKGQEKPAATAKQLRWDGHIVRIDEQAAYMDVRNSAGITKRIHWDSSTTWTKLNKPVTDHSEFKVEERVICLGKAGEKGAFNAIRIDLRVHP
Ga0314861_0001011_4983_5333	3300033977	Peatland	MKKVIVILLFAAFAVVGLAATNVVANGQEKPAAAAKQLRWDGHIVRIDNDASYMDVRNSAGQTKRIHWDSSTLWTKLNKKVADHSEFKEEERVICLGTAGEKGAFNATRIDLRVHP
Ga0314861_0002342_13269_13610	3300033977	Peatland	MRKVIVILLFAVFAVVGLATIANGQEKAAAGPKKGRWEGTIVRISNDDSYMDVRNTAGQLRKIRWDSSTTWTKLNKPVADHSEFKEEQRVICLGTYDEKGAFHATRIDLRLPK
Ga0314861_0016392_4547_4873	3300033977	Peatland	VRKLNVILLFAVFAVVGLATIANGQEKAAAGPKKGRWEGTIVRISNDDSYMDVRNTAGQLRKIHWDSSTTWTKLNKPVADHSEFKEEQRVICLGTYDEKGAFHATRIDL
Ga0314861_0076882_538_888	3300033977	Peatland	MRKLVVVLLFAVFAVVGLASHSGIANGQQKAAAGPKQHRWEGTIVRVDNDTSYMDVRNVSGQVRKIQWDSSTTWTKLNKPVADHSGFKPDERVICLGTYDEKGAFHATRIDLRLPK
Ga0326724_0126245_244_594	3300034091	Peat Soil	MRKIIVVLLFATFALVGLTPQKASASGQEKAAASAKQLRWDGHIVRIDNDASFMDVRDRSGQTKRIHWDSSTVWTKLNKKVADHSEFKEEERVICLGAPGEKGEFNATRIDLRVHP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088421

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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