Metagenome / Metatranscriptome Family F088471

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088471
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	105 residues
Representative Sequence	MARRCAELFVLQNGYTDLPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREARTVQCSMRQCIVFFRVRRVPQLCAYRQVSMTQVFTRLRLEPGGIRDERCDERQV
Number of Associated Samples	91
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.72 %
% of genes near scaffold ends (potentially truncated)	34.86 %
% of genes from short scaffolds (< 2000 bps)	77.98 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.266 % of family members)
Environment Ontology (ENVO)	Unclassified (22.018 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (29.358 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.91% β-sheet: 32.09% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF06127	Mpo1-like	52.29
PF05195	AMP_N	6.42
PF13231	PMT_2	5.50
PF13505	OMP_b-brl	1.83
PF03795	YCII	1.83
PF13432	TPR_16	0.92
PF03797	Autotransporter	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG4539	2-hydroxy fatty acid dioxygenase MPO1 (alpha-oxidation of fatty acids)	Lipid transport and metabolism [I]	52.29
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	6.42
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	59.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	59.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	58.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	58.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	55.05 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	55.05 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	55.05 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2007427000\|2007556003	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	748	Open in IMG/M
2088090015\|GPICI_8897671	All Organisms → cellular organisms → Bacteria	3464	Open in IMG/M
2228664021\|ICCgaii200_c1082561	All Organisms → cellular organisms → Bacteria	2840	Open in IMG/M
3300000890\|JGI11643J12802_10073402	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2302	Open in IMG/M
3300003267\|soilL1_10135585	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M
3300003319\|soilL2_10201634	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300003987\|Ga0055471_10034622	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300003996\|Ga0055467_10000912	All Organisms → cellular organisms → Bacteria	3876	Open in IMG/M
3300003997\|Ga0055466_10076164	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	878	Open in IMG/M
3300004052\|Ga0055490_10087228	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	865	Open in IMG/M
3300004282\|Ga0066599_100527843	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300004463\|Ga0063356_102849670	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	745	Open in IMG/M
3300004778\|Ga0062383_10122092	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300005341\|Ga0070691_10983207	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	525	Open in IMG/M
3300005455\|Ga0070663_102078027	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	512	Open in IMG/M
3300005456\|Ga0070678_101101059	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	733	Open in IMG/M
3300005981\|Ga0081538_10049505	All Organisms → cellular organisms → Bacteria	2548	Open in IMG/M
3300006844\|Ga0075428_100174180	All Organisms → cellular organisms → Bacteria	2331	Open in IMG/M
3300006845\|Ga0075421_100616556	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300006845\|Ga0075421_100697085	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300006846\|Ga0075430_100497784	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300006853\|Ga0075420_100100415	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	2554	Open in IMG/M
3300006853\|Ga0075420_100407770	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1175	Open in IMG/M
3300009053\|Ga0105095_10838368	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	515	Open in IMG/M
3300009090\|Ga0099827_10755347	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	841	Open in IMG/M
3300009094\|Ga0111539_10094444	All Organisms → cellular organisms → Bacteria	3513	Open in IMG/M
3300009100\|Ga0075418_10309925	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300009147\|Ga0114129_10129246	All Organisms → cellular organisms → Bacteria	3472	Open in IMG/M
3300009147\|Ga0114129_11321976	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300009156\|Ga0111538_10526785	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300009157\|Ga0105092_10007164	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5871	Open in IMG/M
3300009157\|Ga0105092_10108290	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300009168\|Ga0105104_10157613	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1229	Open in IMG/M
3300009168\|Ga0105104_10168967	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300009837\|Ga0105058_1184687	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	517	Open in IMG/M
3300010166\|Ga0126306_10325260	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300010403\|Ga0134123_13141686	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	531	Open in IMG/M
3300012225\|Ga0137434_1014941	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300012360\|Ga0137375_10806701	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	754	Open in IMG/M
3300012684\|Ga0136614_10481193	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	897	Open in IMG/M
3300013770\|Ga0120123_1175717	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	514	Open in IMG/M
3300014056\|Ga0120125_1097347	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	685	Open in IMG/M
3300014259\|Ga0075311_1079341	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	676	Open in IMG/M
3300014259\|Ga0075311_1091100	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	641	Open in IMG/M
3300014263\|Ga0075324_1077198	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	687	Open in IMG/M
3300014272\|Ga0075327_1008175	All Organisms → cellular organisms → Bacteria	3219	Open in IMG/M
3300015077\|Ga0173483_10115956	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1139	Open in IMG/M
3300015371\|Ga0132258_10104737	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	6678	Open in IMG/M
3300015371\|Ga0132258_10187671	All Organisms → cellular organisms → Bacteria	5004	Open in IMG/M
3300018059\|Ga0184615_10056096	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2194	Open in IMG/M
3300018063\|Ga0184637_10192663	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1251	Open in IMG/M
3300018077\|Ga0184633_10389661	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	698	Open in IMG/M
3300018078\|Ga0184612_10107317	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300018422\|Ga0190265_10069640	All Organisms → cellular organisms → Bacteria	3169	Open in IMG/M
3300018422\|Ga0190265_10804791	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300018422\|Ga0190265_11419654	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	809	Open in IMG/M
3300018422\|Ga0190265_11807795	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	719	Open in IMG/M
3300018422\|Ga0190265_13021406	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	562	Open in IMG/M
3300018429\|Ga0190272_10406115	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300018429\|Ga0190272_12582491	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	555	Open in IMG/M
3300018466\|Ga0190268_10361247	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	911	Open in IMG/M
3300018466\|Ga0190268_10657206	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	758	Open in IMG/M
3300018476\|Ga0190274_10154817	All Organisms → cellular organisms → Bacteria	1942	Open in IMG/M
3300018481\|Ga0190271_10388667	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300019377\|Ga0190264_11533071	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	581	Open in IMG/M
3300019487\|Ga0187893_10141033	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300020068\|Ga0184649_1387976	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	589	Open in IMG/M
3300020146\|Ga0196977_1002978	All Organisms → cellular organisms → Bacteria	5136	Open in IMG/M
3300021073\|Ga0210378_10074323	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300021090\|Ga0210377_10285954	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300021184\|Ga0196959_10085579	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	706	Open in IMG/M
3300025324\|Ga0209640_10066243	All Organisms → cellular organisms → Bacteria	3126	Open in IMG/M
3300025971\|Ga0210102_1074167	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	734	Open in IMG/M
3300025996\|Ga0208777_1002901	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1504	Open in IMG/M
3300026003\|Ga0208284_1002130	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1528	Open in IMG/M
3300026014\|Ga0208776_1000814	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2702	Open in IMG/M
3300027743\|Ga0209593_10162414	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	798	Open in IMG/M
3300027831\|Ga0209797_10423129	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	538	Open in IMG/M
3300028589\|Ga0247818_10057989	All Organisms → cellular organisms → Bacteria	2490	Open in IMG/M
3300028596\|Ga0247821_10097396	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M
3300028722\|Ga0307319_10214617	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	631	Open in IMG/M
3300028812\|Ga0247825_10663401	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	749	Open in IMG/M
3300030006\|Ga0299907_10527771	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	929	Open in IMG/M
3300030336\|Ga0247826_11764902	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	506	Open in IMG/M
3300030606\|Ga0299906_10395218	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1069	Open in IMG/M
3300030606\|Ga0299906_11383337	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	501	Open in IMG/M
3300030619\|Ga0268386_10333485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1087	Open in IMG/M
3300030620\|Ga0302046_10121649	All Organisms → cellular organisms → Bacteria	2134	Open in IMG/M
3300031229\|Ga0299913_10010938	All Organisms → cellular organisms → Bacteria	8077	Open in IMG/M
3300031229\|Ga0299913_10170719	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2148	Open in IMG/M
3300031229\|Ga0299913_10321811	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1534	Open in IMG/M
3300031229\|Ga0299913_10698384	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300031548\|Ga0307408_101293905	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	683	Open in IMG/M
3300031562\|Ga0310886_10999373	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	536	Open in IMG/M
3300031731\|Ga0307405_10304820	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300031740\|Ga0307468_101229789	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	677	Open in IMG/M
3300031943\|Ga0310885_10409372	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	724	Open in IMG/M
3300031995\|Ga0307409_100523496	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1159	Open in IMG/M
3300032003\|Ga0310897_10261650	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	779	Open in IMG/M
3300032004\|Ga0307414_12261658	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	508	Open in IMG/M
3300032144\|Ga0315910_10020791	All Organisms → cellular organisms → Bacteria → Proteobacteria	4875	Open in IMG/M
3300032157\|Ga0315912_10500599	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	966	Open in IMG/M
3300032179\|Ga0310889_10149265	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300033407\|Ga0214472_10753332	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	881	Open in IMG/M
3300033417\|Ga0214471_10786308	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	743	Open in IMG/M
3300033550\|Ga0247829_10955585	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	712	Open in IMG/M
3300033550\|Ga0247829_11039359	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	680	Open in IMG/M
3300033813\|Ga0364928_0112306	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	648	Open in IMG/M
3300034692\|Ga0373917_0071508	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	560	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.82%
Host-Associated	Host-Associated	19.27%
Engineered	Engineered	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.80%
Aquatic	Environmental → Aquatic	22.02%
Plants	Host-Associated → Plants	19.27%
Bioremediation	Engineered → Bioremediation	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.68%
Freshwater	Environmental → Aquatic → Freshwater	12.84%
Marine	Environmental → Aquatic → Marine	4.59%
Sediment	Environmental → Aquatic → Sediment	4.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.67%
Cave	Environmental → Terrestrial → Cave	0.92%
Floodplain	Environmental → Terrestrial → Floodplain	0.92%
Roots	Host-Associated → Plants → Roots	0.92%
Metal	Engineered → Bioremediation → Metal	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	8.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.42%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.59%
Sand	Environmental → Terrestrial → Soil → Sand	2.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.83%
Loam	Environmental → Terrestrial → Soil → Loam	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.92%
Ice	Environmental → Aquatic → Freshwater → Ice	0.92%
Pond	Environmental → Aquatic → Freshwater → Pond	0.92%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.92%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.92%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	8.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.42%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	5.50%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.83%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.83%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.92%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.92%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.92%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.92%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.27%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.17%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	5.50%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.67%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.67%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.75%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.75%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.83%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.83%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.92%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.92%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.92%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.92%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.92%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.92%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.92%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2007427000	Uranium contaminated groundwater from Oak Ridge Integrated Field Research Center, Tennessee	Environmental	Open in IMG/M
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012225	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014259	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1	Environmental	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020068	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025996	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301 (SPAdes)	Environmental	Open in IMG/M
3300026003	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201 (SPAdes)	Environmental	Open in IMG/M
3300026014	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M
3300034692	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.3	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2007590052	2007427000	Groundwater	DGYTDPPATADSTRWVMERGEQGAWARVLASRGGSLEREAATVQCSARQCVVLFRVRRTPLLCAYRIVTMTQVFTKLRLQPGGIRDVRCDQRRV
GPICI_02486790	2088090015	Soil	MEAMARRCAELFVLQNGYTDLPAADDSTRWVLEHGEAGAWPRVLAARGGMLERQAKSVQCSMRQCLVLFRLRRAAHLCAYRQVSMTQVFTRIRLEPGGIQDMRCGERRA
ICCgaii200_10825612	2228664021	Soil	MARRCAELFVLQNGYTDLPAADDSTRWVLEHGEAGAWPRVLAARGGMLERQAKSVQCSMRQCLVLFRLRRAAHLCAYRQVSMTQVFTRIRLEPGGIQDMRCGERRA
JGI11643J12802_100734022	3300000890	Soil	MARRCAELFVLQNGYTDLPAADDSTRWVLEHGEAGAWPRVLAARGGMLERQAKSVQCSMRQCLVLFRLRRAAHLCAYRQVSMTQVFTRIRLEPGGIQDMRCGERRA*
soilL1_101355852	3300003267	Sugarcane Root And Bulk Soil	MARRCAEMFVRQNGYTDLPAAEDSTRWVLETGEEGSWPRVFAGRVGMLDRAATAVQCSMRQCIVLFRVRRTPVRCAFRQVSMTQVFTQIRLEPGGVQDIRCGDRQA*
soilL2_102016342	3300003319	Sugarcane Root And Bulk Soil	VRDLGENMEAMARRCAEMFVRQNGYTDLPAAEDSTRWVLETGEVGSWPRVFAGRVGMLDRAATAVQCSMRQCIVLFRVRRTPVRCAFRQVSMTQVFTQIQLQPGGIQDIRCDERQA*
Ga0055471_100346223	3300003987	Natural And Restored Wetlands	MARRCAELFVLQNGYTDQPAAEDSTRWVLENGEEGAWPLVLGARGGMLDRQATTVQCSMRQCIVFFRVRRVPQICAYRQVSMTQVFTRIQLEPGGVRDVR
Ga0055467_100009121	3300003996	Natural And Restored Wetlands	MARRCAELFVLQNGYTDQPAAEDSTRWVLENGEEGAWPLVLGARGGMLDRQATTVQCSMRQCIVFFRVRRVPQICAYRQVSMTQVFTRIQLEPGGVRDVRCDERQA
Ga0055466_100761642	3300003997	Natural And Restored Wetlands	MARRCAELFVLQNGYTDQPAAEDSTRWVLENGEEGAWPLVLGARGGMLDRQATTVQCSMRQCIVFFRVRRVPQICAYRQVSMTQVFTRIQLEPGGVRDVRCDERQA*
Ga0055490_100872281	3300004052	Natural And Restored Wetlands	MARRCAEEFVRANGYTADPATDDSTRWVLEVGERGPWPGVFALREGTLERAATTVQCSARRCVVLFRLRRAALQCAYRAVTMTQVFTRLRLEPGGIRNVRCGDRQA*
Ga0066599_1005278432	3300004282	Freshwater	VAPWLKEDPQRCLLTRDLREDMDAMARRCAETFVRQNGYTDLPATEDSTRWVLEVGEAGVWPRVLASRVGSLERTAATAQCSMRQCVVFFRVRRTPLLCAYRLVTMTQVFTKLRLEPGGIHDIRCDQRQA*
Ga0063356_1028496702	3300004463	Arabidopsis Thaliana Rhizosphere	MARRCAEAFIRENGYTPEPATEDTTRWVLEVGERGPWPGVLALREGSLEPEAGAVQCSVRQCVVLFRVRRDALRCAYRIVTMTQVFTRLRLEPGGIRNSRCGDREA*
Ga0062383_101220922	3300004778	Wetland Sediment	MARRCAEAFVRENGYTAEPATDDTTRWVLEVGERGPWPGVLALREGSLEREATTVQCSVRQCVVLFRLRRETLRCAYRVVTMTQVFTRLRLEPGGIRNVRCAERQT*
Ga0070691_109832071	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	DLGENMEAMARRCAELFVLQNGYTDLPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREARTVQCSMKQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLEPGGIRDERCDERQV*
Ga0070663_1020780271	3300005455	Corn Rhizosphere	PATDDSTRWVLEAGDRGPWPRLLAGRGGMLERAATTVQCSMRQCVVFFLSRRLPQYCAYRVVTMTQVFTRLQLEPQEIRDRRCTERQA*
Ga0070678_1011010592	3300005456	Miscanthus Rhizosphere	TSAPATDDSTRWVLEVGESGSWPRVFATREGTLDDGASTTQCSVRQCVVLFRMRRQTIACAYRAVTMTQVFTRMRLEPGGVQDMRCADRQA*
Ga0081538_100495053	3300005981	Tabebuia Heterophylla Rhizosphere	MARRCAEVFVLQNGYTDLPAAADSTRWVLENGEVGSWPVVLAARGGMLEREGKSVQCSMRQCVVFFRIRRAPQACAYRQVSMTQVFTRIQLEPGGIRDVRCDERQA*
Ga0075428_1001741803	3300006844	Populus Rhizosphere	MARRCAELFVLQNGYTDMPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREARSVQCSMKQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLEPGGIRDERCDERQV*
Ga0075421_1006165563	3300006845	Populus Rhizosphere	MARRCAELFVRQNGYTDLPAAEDSTRWVLENGEMGSWPVVLAARGGMLERDARSVQCSMRQCIVFFRVRRAPQLCAYRQVSMTQVFTRIRLEPGGIRDVRCDERQA*
Ga0075421_1006970851	3300006845	Populus Rhizosphere	MARRCAEAFVRQNGYTDLPATEDSTRWVLEVGELGAWPRVLASRVGTLEREAATAQCSVRQCVVLFRLRRAPLICAYRVVTMTQVFTKLRLEPGGISDARCDERTA*
Ga0075430_1004977842	3300006846	Populus Rhizosphere	MARRCAELFVLQNGYTDLPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREARSVQCSMKQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLEPGGIRDERCDERQV*
Ga0075420_1001004152	3300006853	Populus Rhizosphere	MARRCAELFVLQNGYTDMPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREARSVQCSMRQCIVSFRVRREPQLCAYRQVSMTQVFTRIRLEPGGIRDERCDERQV*
Ga0075420_1004077702	3300006853	Populus Rhizosphere	VRDLGENMEAMARRCAEMFVRQNGYTDLPATEDSTRWVMELGEAGSWPRVLAARGGMLHREATSVQCSMRQCIVVFRVRRTTVRCAYRLVSMTQVFTQIRLEPGGIQDIRCDERRA*
Ga0105095_108383682	3300009053	Freshwater Sediment	ADPATDDSTRWVLEVGERGPWPGVFALREGTLERAATTVQCSARRCVVLFRLRRAALQCAYRAVTMTQVFTRLRLEPGGIRNVRCGDRQA*
Ga0099827_107553472	3300009090	Vadose Zone Soil	MEVMARHCAELFVLENGYTDLPATEDSTRWVEEVGDRGTWPLVLSARSGTLNRRAATVQCSVRRCTVLFRARRPVLICGYRSVTMTQVFTRLRLEPGIIQDGHCTDRRS*
Ga0111539_100944442	3300009094	Populus Rhizosphere	MEAMARRCAELFVLQNGYTDMPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREARSVQCSMKQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLEPGGIRDERCDERQV*
Ga0075418_103099252	3300009100	Populus Rhizosphere	LLTRDLGENMEAMARRCAELFVRQNGYTDLPAAEDSTRWVLENGEMGSWPVVLAARGGMLERDGRSVQCSMRQCIVFFRVRRAPQLCAYRQVSMTQVFTRIRLEPGGIRDVRCDERQA*
Ga0114129_101292462	3300009147	Populus Rhizosphere	LLTRDLGENMEAMARRCAELFVRQNGYTDLPAAEDSTRWVLENGEMGSWPVVLAARGGMLERDARSVQCSMRQCIVFFRVRRAPQLCAYRQVSMTQVFTRIRLEPGGIRDVRCDERQA*
Ga0114129_113219762	3300009147	Populus Rhizosphere	MDAMARRCAEAFVRQNGYTDLPATEDSTRWVLEVGELGAWPRVLASRVGTLEREAATAQCSMRQCVVLFRLRRAPLICAYRVVTMTQVFTKLRLEPGGISDARCDERTA*
Ga0111538_105267851	3300009156	Populus Rhizosphere	MEAMARRCAELFVLQNGYTDMPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREARSVQCSMKQCIVFFRVRRAPQLCAYRQVSMTQVFTRIRLEPGGIRDVRCDERQA*
Ga0105092_100071644	3300009157	Freshwater Sediment	MEAMARRCAEQFVRQNGYTLAPATDDSTRWVLEVGELGGWARVFALREGTLDEQASTTQCSVRQCVVIFRMRRQTIACAFRAVTMTQVFTRIRLEPGAVQDIRCTDRQA*
Ga0105092_101082903	3300009157	Freshwater Sediment	MEAMARRCAELFVLQNGYTDLPAVEDSTRWVLESGEVGSWPLVLAGRGGMLEREARSVQCSMRQCIVFFRVRRAPQLCAYRQVSMTQVFTRIRLEPGGIRDVRCDERQA*
Ga0105104_101576132	3300009168	Freshwater Sediment	MEAMARRCAELFVLQNGYTDLPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREARTVQCSMRQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLERGGIRDERCDERQV*
Ga0105104_101689672	3300009168	Freshwater Sediment	MEAMARRCAEQFVRQNGYTLAPATDDSTRWVLEVGELGSWARVFALREGTLDQQASTTQCSVRQCVVLFRMRRQTIACAYRAVTMTQVFTRIRLEPGAVQDIRCTDRQA*
Ga0105058_11846871	3300009837	Groundwater Sand	VIRDLGEGMEFMAKRCAEEFVRQNGYTDLPATEDSTRWVLEVGEGGPWPGILTAREATLEREAATFQCSLRQCLVLFRLRRSALVCGYRVVSMTQVFTKLRLEPGGVQDPRCGDRQS*
Ga0126306_103252603	3300010166	Serpentine Soil	VRDLGENMEAMARRCAEMFVRQNGYTDLPATEDSTRWVMELGEAGSWPRVLAARGGMLHREATSVQCSMRQCMVVFRVRRTTVRCAYRLVSMTQVFT
Ga0134123_131416862	3300010403	Terrestrial Soil	LLVRDLTENMEAMARRCAEQFVRQNGYTSAPATDDSTRWVLEVGESGSWPRVFATREGTLDDGASTTQCSVRQCVVLFRMRRQTIACAYRAVTMTQVFTRMRLEPGGVQDMRCADRQA*
Ga0137434_10149412	3300012225	Soil	MDAMARRCAEAFVRQNGYTDLPATGDSTRWVLEVGELGTWPRVLASRGGSLEREAAAAQCSMRQCVVLFRIRRAALICAYRIVTMTQVFTKLRLEPGGIHDVRCDERRA*
Ga0137375_108067012	3300012360	Vadose Zone Soil	GMEIMARRCAELFVLENGYTDLPATEDSTRWVQEVGDRGTWPLVLSTRGGTLDRTAATVQCSVRRCTVLFRARRPVLVCAYRSVTMTQVFTRLRLEPGAIQDVRCNERRS*
Ga0136614_104811931	3300012684	Polar Desert Sand	METMAQRCAEEFVRENGYTVSPATDDSTRWVLEIGEGGAWPRVFASREGTLEDEASSSQCSMRQCLVLFRLRRQSLACAYRAVTMSQVYTRLKLEPGGIHDVRCGDRRA*
Ga0120123_11757172	3300013770	Permafrost	CAELFVLENGYTDLPATDDSTRWVQEVGDRDSWPQVLSTRSGTLERTAATVQCSVRRCTVLFRAHRPALACVYRSVTMTQVFTRLQLEPRAIQDVRCYERIS*
Ga0120125_10973472	3300014056	Permafrost	MEVMARRCAELFVLENGYTDLPATDDSTRWVQEVGDRDSWPQVLSTRSGTLERTAATVQCSVRRCTVLFRARRPVLVCAYRSVTMTQVFTRL
Ga0075311_10793411	3300014259	Natural And Restored Wetlands	MEAMARRCAELFVLQNGYTDQPAAEDSTRWVLENGEEGAWPLVLGARGGMLDRQATTVQCSMRQCIVFFRVRRVPQICAYRQVSMTQVFTRIQLEPGGVRDVRCDERQA*
Ga0075311_10911002	3300014259	Natural And Restored Wetlands	PATGDSTRWVLEAGEAGTWSRVLASRGGSLDRDATTVQCSMRQCVVFFRVRRTPLHCAYRVVTMTQVFTRLSLEPGGIQDVRCEDRRA*
Ga0075324_10771981	3300014263	Natural And Restored Wetlands	LTRDLGENMEAMARRCAELFVLQNGYTDQPAAEDSTRWVLENGEEGAWPLVLGARGGMLDRQATTVQCSMRQCIVFFRVRRVPQICAYRQVSMTQVFTRIQLEPGGVRDVRCDERQA*
Ga0075327_10081753	3300014272	Natural And Restored Wetlands	MEAMARRCAELFVLQNGYTDQPAAEDSTRWVLENGEAGAWPLVLGARGGMLDRQATTVQCSMRQCIVFFRVRRVPQICAYRQVSMTQVFTRIQLEPGGVRDVRCDERQA*
Ga0173483_101159561	3300015077	Soil	MEAMARRCAELFVLQNGYTDLPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREGRSVQCSMRQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLEPGGIRDERCDERQV*
Ga0132258_101047376	3300015371	Arabidopsis Rhizosphere	MEAMARRCAELFVLQNGYTDMPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREARTVQCSMKQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLEPGGIRDERCDERQV*
Ga0132258_101876715	3300015371	Arabidopsis Rhizosphere	MEAMARRCAEQFVRQNGYTSAPATDDSTRWVLEVGESGSWPRVFATREGTLDDGASTTQCSVRQCVVLFRMRRQTIACAYRAVTMTQVFTRMRLEPGGVQDMRCADRQA*
Ga0184615_100560963	3300018059	Groundwater Sediment	MARRCAEAFVRQNGYTDLPATEDSTRWVLEVGELGTWSRVLASRGGSLEREAATAQCSMRQCVVLFRIRRTPLMCAYRIVTMTQVFTKLRLEPGGIHDVRCDERRA
Ga0184637_101926633	3300018063	Groundwater Sediment	MARRCAETFVRQNGYTDVPATEDSTRWVLEVGEAGAWPRVLASRVGSLEREATTAQCSMRQCVVFFRVRRAPLICAYRIVSMTQVFTKLRLEPGGIYDARCDERRA
Ga0184633_103896612	3300018077	Groundwater Sediment	MARRCAEAFVRQNGYTDVPATEDSTRWVLEVGEAGAWPRVLASRVGSLEREATTAQCSMRQCVVFFRVRRAPLICAYRIVTMTQVFT
Ga0184612_101073172	3300018078	Groundwater Sediment	MDAMARRCAEAFVRQNGYTDLPATEDSTRWVLEVGEAGAWPRVLASRVGSLEREATTAQCSMRQCLVFFRVRRTPLRCAYRIVTMTQVFTKLRLEPGGIYDVRCDERRA
Ga0190265_100696402	3300018422	Soil	MARRCAEAFVRQNGYTDLPATEDSTRWVMEVGEQGAWPRVLASRVGSLEREAATVQCSMRQCVVLFRVRRTPLICGYRIVTMTQVFTKLKLQPGGVHDVRCDERRA
Ga0190265_108047912	3300018422	Soil	MARRCAEAFVRQNGYTDLPATEDSTRWVLEVGELDAWPRVLASRIGSLERKAATAQCSMRQCVVLFRVRRTPLICAYRAVTMTQVFTKLRLEPGGIRDVRCDERRA
Ga0190265_114196541	3300018422	Soil	CLLSRDLREGMEAMARRCAEAFVRQNGYTDLPAAEDSTRWVPEVGETGAWHRVLAARGGSLERTATTVQCSMRQCLVLFRIRRTLVCGYRIVSMSQVFTKVRLEPGGIHDVRCDEWRA
Ga0190265_118077951	3300018422	Soil	RRCAEAFVRQNGYTDLPATEDSTRWVLEVGELGAWPRVLASRVGSLEREAATVQCSMRQCVVLFRVRRSSLDCAYRVVTMTQVFTKLRLEPGGIYDVRCDERRA
Ga0190265_130214061	3300018422	Soil	MARHCAEAFVRQNGYTDIPATEDSTRWVLETGELGAWPQVLASRGGSLEREAATAQCSMRQCVVFFRVRRTPLICAYRIVTMTHV
Ga0190272_104061152	3300018429	Soil	MARRCAEAFVQQNGYTDLPATEDSTRWVLEVGELGAWPRVLASRVGSLEREAATAQCSMRQCVVLFRVRRTPLVCAYRIVTMTQVFTKLRLEPGGISDARCDERRA
Ga0190272_125824912	3300018429	Soil	AEVFVRQNGYIDLPVVEDSIRWVLEVGEIGAWSWVLASRVGSLEREAATAQCSMRQCVVLFRVRRTPQSCAYRIVTMTQVFTKLRLEPGGIYDVRCDERRA
Ga0190268_103612471	3300018466	Soil	VRDLGENMEAMARRCAEMFVRQNGYTDLPATEDSTRWVMEVGEAGSWSRVLAARGGMLHREATSVQCSMRQCIVVFRVRRTTVRCAYRLVSMTQVFTQIRLEPGGIQDIRCDERRAQSSSVTLSAATGAML
Ga0190268_106572062	3300018466	Soil	MARRCAQAFIRENGYTAEPATPDTTRWVLEIGEVGSWPCVLAQRGGSLEPEATTVQCSVRQCVVLFRVRRDPVRCTYRLVTMTQVFTRIRLEQGAIRNVRCGDRQV
Ga0190274_101548173	3300018476	Soil	MARRCAELFVLQNGYTDLPAAEDSTRWVLEHGEIGSWPRLLAARGGMLERDARSVQCSMKQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLEPGGIRDERCDERQV
Ga0190271_103886672	3300018481	Soil	MARRCAELFVLQNGYTDLPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREARSVQCSMKQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLEPGGIRDERCDERQV
Ga0190264_115330711	3300019377	Soil	MARRCAEAFVRQNGYTDLPATEDSTRWVLEVGELGAWPRVLASRVGSLEREAATAQCSMRQCVVLFRVRRTPQSCAYRIVTMTQVFTKLRLEPGGIYDVRCDERRA
Ga0187893_101410332	3300019487	Microbial Mat On Rocks	MARRCAETFVRQNGYTDLPATEDSTRWVLEVGEYGAWPRVLASRLGSLEGAAATAQCSGRQCTVLFRVRRTPWICAYRIVTMSQVFTRLRLEPGGIYDVRCDERRA
Ga0184649_13879761	3300020068	Groundwater Sediment	MARRCAEAFVRQNGYTDLPATEDSTRWVLEVGELGTWSRVLASRGGSLEREAAATQCSMRQCVVLFRIRRTPLMCAYRIVTMSQVFTKLRLEPGGIHDVRCDERRA
Ga0196977_10029787	3300020146	Soil	MARRCAEAFIRENGYTAEPATEDTTRWVLEVGERGPWPGVLALRGGTLEPQATSVQCSARQCVVLFRVRRDALGCSYRIVTMSQVFTRLRLERGGIRNVRCGDRAV
Ga0210378_100743232	3300021073	Groundwater Sediment	MARRCAEAFVQQNGYTDVPATEDSTRWVLEVGEAGAWPRVLASRVGSLEREATTAQCSMRQCLVFFRVRRTPLRCAYRVVSMTQVFTKLRLEPGGIYDVRCDERRA
Ga0210377_102859542	3300021090	Groundwater Sediment	MARRCAEAFVRQNGYTDLPATEDSTRWVLEVGDLGTWSRVLASRGGSLEREAAATQCSMRQCVVLFRIRRTPLMCAYRIVTMSQVFTKLRLEPGGIHDVRCDERRA
Ga0196959_100855792	3300021184	Soil	FVRQNGYTDLPATEDSTRWVMERGEAGSWNRVLAARGGMLEREATTVQCSMRQCVVFFRLRRTPLLCGYRLVTMTQVFTRIRLEQGGVHDVRCDERRA
Ga0209640_100662432	3300025324	Soil	MARRCAEAFVRQNGYTDLPAAEDSTRWVLEVGELGTWSRVLASRGGSLEREAATAQCSMRQCVVLFRIRRTPLMCAYRIVTMSQVFTKLRLEPGGIHDVRCDERRA
Ga0210102_10741672	3300025971	Natural And Restored Wetlands	MARRCAEEFVRANGYTADPATDDSTRWVLEVGERGPWPGVFALREGTLERAATTVQCSARRCVVLFRLRRAALQCAYRAVTMTQVFTRLRLEPGGIRNVRCGDRQA
Ga0208777_10029012	3300025996	Rice Paddy Soil	HCAELFIRQNGYTDDPATPDSTRWVLEIGEDGPWPGVLEARGGSLGRAAAAVQCSMRQCLVLFRLRRPVLACAFRVVAMTQVFTRIRLVPGDVRDTHCGERRA
Ga0208284_10021302	3300026003	Rice Paddy Soil	GYTDDPATPDSTRWVLEIGEDGPWPGVLEARGGSLGRAAAAVQCSMRQCLVLFRLRRPVLACAFRVVAMTQVFTRIRLVPGDVRDTHCGERRA
Ga0208776_10008144	3300026014	Rice Paddy Soil	LLVRDLGEGMEDMARHCAELFIRQNGYTDDPATPDSTRWVLEIGEDGPWPGVLEARGGSLGRAAAAVQCSMRQCLVLFRLRRPVLACAFRVVAMTQVFTRIRLVPGDVRDTHCGERRA
Ga0209593_101624141	3300027743	Freshwater Sediment	MARRCAELFVLQNGYTDLPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREARTVQCSMRQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLERGGIRDERCDERQV
Ga0209797_104231292	3300027831	Wetland Sediment	MARRCAEAFVRENGYTAEPATDDTTRWVLEVGERGPWPGVLALREGSLEREATTVQCSVRQCVVLFRLRRETLRCAYRVVTMTQVFTRLRLEPGGIRNVRCAERQT
Ga0247818_100579893	3300028589	Soil	MALRCAELFVLQNGYTDLPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREGRSVQCSMRQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLEPGGIRDERCDERQV
Ga0247821_100973963	3300028596	Soil	MARRCAELFVLQNGYTDLPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREGRSVQCSMRQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLEPGGIRDERCDERQV
Ga0307319_102146171	3300028722	Soil	MARRCAELFVLQNGYTDLPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREARTVQCSMRQCIVFFRVRRVPQLCAYRQVSMTQVFTRLRLEPGGIRDERCDERQV
Ga0247825_106634011	3300028812	Soil	MEAMARRCAELFVLQNGYTDLPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREARTVQCSMRQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLEPGGIRDERCDERQV
Ga0299907_105277711	3300030006	Soil	MARRCAEAFVQQNGYTDVPATEDSTRWVLEVGELGAWPQVLASRVGMLEREATTVQCSMRQCVVFFRVRRTPLICAYRIVTMTQVFTRLRLEVGGIHDVRCDERRA
Ga0247826_117649021	3300030336	Soil	NGYTDLPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREARTVQCSMRQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLERGGIRDERCDERQV
Ga0299906_103952182	3300030606	Soil	MARRCAEVFVLQNGYTDLPATEDSTRWVLEVGELGAWPRVLAARVGSLEREAATAQCSMRQCVVLFRLRRTPLICAYRIVTMTQVFTKLRLEPGGISDARCDERQA
Ga0299906_113833372	3300030606	Soil	CAEAFIRHNGYTDLPATEDSTRWVLEAGEAGAWPRVLASRVGSLEREATTAQCSMRECVVFFRVRRTLNCAYRIVTMTQVFTKLRLEPGGIYDVRCDERRA
Ga0268386_103334852	3300030619	Soil	MARRCAEAFVRQNGYTDLPATDDSTRWVLEIGEAGAWPRVLASRVGSLEREATTAQCSMRECVVFFRFRRTLNCAYRIVTMTQVFTKLRLEPGGIYDVRCDERRV
Ga0302046_101216493	3300030620	Soil	MARRCAEVFVLQNGYTDLPATEDSTRWVLEVGELGAWPRVLAARVGSLEREAATAQCSMRQCVVLFRLRRTPLICAYRIVTMTQVFTKLRLEPGGISDTRCDERQA
Ga0299913_100109382	3300031229	Soil	MEGMARRCAELFVRQNGYTDLPATGDSTRWVLEAGEAGTWPRVLASRGGSLDRDATTVQCSMRQCVVFFRVRRTPLYCAYRVVTMTQVFTRLSLQPGGIQDVRCEDRRA
Ga0299913_101707191	3300031229	Soil	RCAETFVRQNGYTQLPASEDSTRWVMEAGEHGAWPRVLASRVGSLEGEAATVQCSVGECVVFFRARRTSLECAYRVVTMSQVFTRLQLEPGGVQNMRCDERRA
Ga0299913_103218113	3300031229	Soil	MARRCAEAFVRQNGYTDLPATEDSTRWVLEAGERGAWPWVLASRGGSLDREATSAQCSMRQCLVLFRVRRTPLMCAYRVVTMTQVFTKLRLEPGGIYDVRCDERRA
Ga0299913_106983843	3300031229	Soil	MARRCAEAFVRDNGYTAAPATEDSTRWVLEIGDRADWPGVLALREGTLEPGASTVQCSARQCVVLFRLRRVSLECAYRSVTMTQVFT
Ga0307408_1012939051	3300031548	Rhizosphere	MARRCAQAFIRENGYTPEPATEDTTRWVLEVGERGPWPGVLALREGSLEPEASAVQCSVRQCVVLFRIRRDALRCAYRIVTMTQVFTRLRLEP
Ga0310886_109993731	3300031562	Soil	AMALRCAELFVLQNGYTDLPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREGRSVQCSMRQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLEPGGIRDERCDERQV
Ga0307405_103048203	3300031731	Rhizosphere	MARRCAQAFIRENGYTPEPATEDTTRWVLEVGERGPWPGVLALREGSLEPEASAVQCSVRQCVVLFRIRRDALRCAYRIVTMTQVFTRLRLEPGGIRNVRCADREA
Ga0307468_1012297892	3300031740	Hardwood Forest Soil	MEAMARRCAEQFVRQNGYTMAPAADDSTRWVLEVGEAGSWTRVLASREGTLADEASTVQCSVRQCVVLFRMRRQAIACAYRAVTMTQVFTRMR
Ga0310885_104093722	3300031943	Soil	MALRCAELFVLQNGYTDLPAAEDSTRWVLENGEMGSWPVVLAARGGMLERDGRSVQCSMRQCIVFFRVRRAPQLCAYRQVSMTQVFTRIRLEPGGIRDVRCDERQA
Ga0307409_1005234962	3300031995	Rhizosphere	MARRCAELFVRQNGYTDVPATEDSTRWVLERGEAGSWARVLAARGGMLEREATAVQCSMRQCLVSFRVRRASLRCAYRNVSMTQVFTQIRLEAGGVQDIRCDERQA
Ga0310897_102616501	3300032003	Soil	MALRCAELFVLQNGYTDLPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREARSVQCSMKQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLEPGGIRDERC
Ga0307414_122616581	3300032004	Rhizosphere	CAELFVLQNGYTDLPAAEDSTRWVLEHGEVGTWPRVLAGRGGMLDREANAVQCSMRQCIVSFRLRRAPQLCAYRLVSMTQVFTEIRLEPGGVRDMRCNERRS
Ga0315910_100207912	3300032144	Soil	MARRCAELFVRQNGYTDLPAAEDSTRWVLENGEMGSWPVVLAARGGMLERDGRSVQCSMRQCIVFFRVRRAPQLCAYRQVSMTQVFTRIRLEPGGIRDVRCDERQA
Ga0315912_105005993	3300032157	Soil	MARRCAELFVRQNGYTDLPAAEDSTRWVLENGEMGSWPVVLAARGGMLERDGRSVQCSMRQCIVFFRVRRAPQLCAYRQVSMTQVFTRIRLEPGGIRDVRC
Ga0310889_101492653	3300032179	Soil	MARRCAELFVLQNGYTDMPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREGRSVQCSMRQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLE
Ga0214472_107533322	3300033407	Soil	MARHCAEAFVRQNGYTDLPATEDSTRWVLEVGEVGAWPRVLASRVGSLERDATTAQCSMRECVVFFRVRRTLNCAYRIVTMTQVFTKLRLEPGGIYDVRCDERRA
Ga0214471_107863081	3300033417	Soil	MARRCAEAFVRQNGYTDLPATEDSTRWVLEVGEVGAWPRVLASRVGSLERDATTAQCSMRECVVFFRVRRTLNCAYRIVTMTQVFTKLRLEPGGIYDVRCDERRA
Ga0247829_109555852	3300033550	Soil	VLQNGYTDLPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREGRSVQCSMRQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLEPGGIRDERCDERQV
Ga0247829_110393592	3300033550	Soil	MEAMARRCAELFVLQNGYTDLPAAEDSTRWVLEHGEIGSWPRLLAARGGMLEREARTVQCSMRQCIVFFRVRRVPQLCAYRQVSMTQVFTRIRLERGGIRDERCDERQV
Ga0364928_0112306_19_348	3300033813	Sediment	MDAMARRCAEAFVQQNGYTDLPATGDSTRWVLEVGELGTWPRVLASRGSSLEREAATAQCSMRQCVVLFRIRRTALICAYRIVSMTQVFTKLRLEPGGIRDVRCDERRA
Ga0373917_0071508_3_320	3300034692	Sediment Slurry	ARRCAEQFVRQNGYTLAPATDDSTRWVLEVGESGSWARVLALREGSLDQPASSVQCSVRQCVVLFRMRRQTIACAYRAVTMTQVFTRIRLEPGGVQDLRCTDRQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088471

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences