Metagenome Family F088580

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F088580
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	122 residues
Representative Sequence	REIASAAEFNLRSASGGIATHENKLKKDPAGVKAVIRATFEAMDFNRREKTWMVNYIQNKWKVSPKVAEESYRAWLNGFTTDGKIPIKDFQEIYDQAYESKLIPTPVPAAKVMDYTLTDEVFKEKR
Number of Associated Samples	99
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.59 %
% of genes near scaffold ends (potentially truncated)	86.24 %
% of genes from short scaffolds (< 2000 bps)	90.83 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (13.761 % of family members)
Environment Ontology (ENVO)	Unclassified (35.780 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.450 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.55% β-sheet: 1.30% Coil/Unstructured: 44.16%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF14518	Haem_oxygenas_2	26.61
PF03070	TENA_THI-4	20.18
PF09084	NMT1	6.42
PF01274	Malate_synthase	1.83
PF03401	TctC	0.92
PF04365	BrnT_toxin	0.92
PF00149	Metallophos	0.92
PF13489	Methyltransf_23	0.92
PF00005	ABC_tran	0.92
PF07969	Amidohydro_3	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	6.42
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	6.42
COG2225	Malate synthase	Energy production and conversion [C]	1.83
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.92
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	93.58 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	91.74 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	91.74 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	89.91 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	89.91 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.92 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_14292639	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1320	Open in IMG/M
3300000890\|JGI11643J12802_11742344	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1376	Open in IMG/M
3300003911\|JGI25405J52794_10000672	All Organisms → cellular organisms → Bacteria	5172	Open in IMG/M
3300003993\|Ga0055468_10216298	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300003996\|Ga0055467_10235101	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300003997\|Ga0055466_10078866	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	866	Open in IMG/M
3300004057\|Ga0055496_10027910	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1094	Open in IMG/M
3300004067\|Ga0055485_10093060	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	759	Open in IMG/M
3300004463\|Ga0063356_100931854	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1231	Open in IMG/M
3300005277\|Ga0065716_1007621	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	739	Open in IMG/M
3300005289\|Ga0065704_10617259	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	593	Open in IMG/M
3300005295\|Ga0065707_10574306	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	677	Open in IMG/M
3300005295\|Ga0065707_11031170	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300005444\|Ga0070694_101454143	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	579	Open in IMG/M
3300006046\|Ga0066652_100861800	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	865	Open in IMG/M
3300006049\|Ga0075417_10061765	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300006797\|Ga0066659_10230828	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300006852\|Ga0075433_11527677	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	576	Open in IMG/M
3300006853\|Ga0075420_101119755	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	677	Open in IMG/M
3300006871\|Ga0075434_100719536	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1015	Open in IMG/M
3300006871\|Ga0075434_101875657	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300006969\|Ga0075419_10265079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1151	Open in IMG/M
3300007255\|Ga0099791_10681693	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
3300009012\|Ga0066710_100422925	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1991	Open in IMG/M
3300009053\|Ga0105095_10718329	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300009087\|Ga0105107_10924839	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	607	Open in IMG/M
3300009094\|Ga0111539_10909466	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300009100\|Ga0075418_11703055	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	685	Open in IMG/M
3300009137\|Ga0066709_104591136	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
3300009147\|Ga0114129_10072470	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4801	Open in IMG/M
3300009147\|Ga0114129_11310885	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300009157\|Ga0105092_10025757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3102	Open in IMG/M
3300009162\|Ga0075423_12066950	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	617	Open in IMG/M
3300009167\|Ga0113563_13160990	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300010391\|Ga0136847_11323585	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1338	Open in IMG/M
3300010398\|Ga0126383_12910122	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	559	Open in IMG/M
3300010399\|Ga0134127_10624064	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1109	Open in IMG/M
3300010400\|Ga0134122_10471266	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1129	Open in IMG/M
3300010403\|Ga0134123_10694607	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	994	Open in IMG/M
3300011421\|Ga0137462_1160202	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	553	Open in IMG/M
3300011422\|Ga0137425_1033446	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1119	Open in IMG/M
3300011427\|Ga0137448_1045551	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1098	Open in IMG/M
3300011427\|Ga0137448_1166799	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	611	Open in IMG/M
3300011431\|Ga0137438_1194794	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619	Open in IMG/M
3300011434\|Ga0137464_1059370	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1082	Open in IMG/M
3300011436\|Ga0137458_1098178	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	839	Open in IMG/M
3300011436\|Ga0137458_1213941	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586	Open in IMG/M
3300011437\|Ga0137429_1123031	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	797	Open in IMG/M
3300012041\|Ga0137430_1047588	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1158	Open in IMG/M
3300012172\|Ga0137320_1114069	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	576	Open in IMG/M
3300012179\|Ga0137334_1043471	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	941	Open in IMG/M
3300012200\|Ga0137382_10005362	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6355	Open in IMG/M
3300012206\|Ga0137380_11499568	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	559	Open in IMG/M
3300012231\|Ga0137465_1146182	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	713	Open in IMG/M
3300012503\|Ga0157313_1063342	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	511	Open in IMG/M
3300012922\|Ga0137394_10278187	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1431	Open in IMG/M
3300012922\|Ga0137394_10423001	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1135	Open in IMG/M
3300012929\|Ga0137404_10496511	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1088	Open in IMG/M
3300012929\|Ga0137404_11555213	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	613	Open in IMG/M
3300012930\|Ga0137407_12400036	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504	Open in IMG/M
3300012944\|Ga0137410_10481701	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1011	Open in IMG/M
3300014865\|Ga0180078_1041539	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	753	Open in IMG/M
3300014866\|Ga0180090_1056966	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	678	Open in IMG/M
3300015245\|Ga0137409_10523008	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1011	Open in IMG/M
3300015264\|Ga0137403_10084334	All Organisms → cellular organisms → Bacteria → Proteobacteria	3207	Open in IMG/M
3300015264\|Ga0137403_10327086	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1424	Open in IMG/M
3300015372\|Ga0132256_100085430	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3032	Open in IMG/M
3300015372\|Ga0132256_102050421	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	678	Open in IMG/M
3300018032\|Ga0187788_10161186	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	850	Open in IMG/M
3300018054\|Ga0184621_10028602	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1767	Open in IMG/M
3300018063\|Ga0184637_10097811	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1806	Open in IMG/M
3300018064\|Ga0187773_10030592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2371	Open in IMG/M
3300018072\|Ga0184635_10398156	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300018073\|Ga0184624_10223528	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	842	Open in IMG/M
3300018075\|Ga0184632_10408884	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	569	Open in IMG/M
3300018079\|Ga0184627_10584210	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300018422\|Ga0190265_10664310	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1163	Open in IMG/M
3300018476\|Ga0190274_10741255	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1032	Open in IMG/M
3300020186\|Ga0163153_10297706	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	741	Open in IMG/M
3300021344\|Ga0193719_10001133	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	10444	Open in IMG/M
3300022208\|Ga0224495_10278237	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	679	Open in IMG/M
3300025165\|Ga0209108_10596155	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300025792\|Ga0210143_1002462	All Organisms → cellular organisms → Bacteria → Proteobacteria	4042	Open in IMG/M
3300025796\|Ga0210113_1052124	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	822	Open in IMG/M
3300025951\|Ga0210066_1011275	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1325	Open in IMG/M
3300025959\|Ga0210116_1022233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1182	Open in IMG/M
3300026053\|Ga0208422_1015987	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	876	Open in IMG/M
3300026121\|Ga0207683_11865968	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	550	Open in IMG/M
3300026535\|Ga0256867_10307852	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300027360\|Ga0209969_1013299	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1191	Open in IMG/M
3300027526\|Ga0209968_1023675	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1005	Open in IMG/M
3300027617\|Ga0210002_1051750	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	709	Open in IMG/M
3300027695\|Ga0209966_1099458	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	656	Open in IMG/M
3300027717\|Ga0209998_10012557	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1759	Open in IMG/M
3300027831\|Ga0209797_10351991	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300027843\|Ga0209798_10446694	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	598	Open in IMG/M
3300027880\|Ga0209481_10020078	All Organisms → cellular organisms → Bacteria	2950	Open in IMG/M
3300027880\|Ga0209481_10167808	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1088	Open in IMG/M
3300031820\|Ga0307473_10245753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1094	Open in IMG/M
3300031854\|Ga0310904_11114991	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	566	Open in IMG/M
3300032144\|Ga0315910_10237226	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1375	Open in IMG/M
3300032157\|Ga0315912_10183142	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1642	Open in IMG/M
3300032829\|Ga0335070_11114102	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	726	Open in IMG/M
3300033413\|Ga0316603_12198062	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300033414\|Ga0316619_11339173	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	637	Open in IMG/M
3300033419\|Ga0316601_100320750	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1427	Open in IMG/M
3300033487\|Ga0316630_11575660	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300034053\|Ga0373890_088521	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300034176\|Ga0364931_0243988	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	590	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.23%
Host-Associated	Host-Associated	23.85%
Engineered	Engineered	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	39.45%
Aquatic	Environmental → Aquatic	35.78%
Plants	Host-Associated → Plants	23.85%
Bioremediation	Engineered → Bioremediation	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	38.53%
Sediment	Environmental → Aquatic → Sediment	19.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.09%
Marine	Environmental → Aquatic → Marine	9.17%
Freshwater	Environmental → Aquatic → Freshwater	7.34%
Floodplain	Environmental → Terrestrial → Floodplain	0.92%
Metal	Engineered → Bioremediation → Metal	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	19.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.93%
Wetlands	Environmental → Aquatic → Marine → Wetlands	8.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.34%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.34%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.75%
Lake	Environmental → Aquatic → Freshwater → Lake	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.83%
Sediment	Environmental → Aquatic → Marine → Sediment	0.92%
Loam	Environmental → Terrestrial → Soil → Loam	0.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.92%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.92%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	19.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.93%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	8.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.92%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.92%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.92%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.92%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	13.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.01%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	8.26%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.50%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	5.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.75%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.83%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.92%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.92%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.92%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.92%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004057	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D2	Environmental	Open in IMG/M
3300004067	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005277	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011421	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012172	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT366_2	Environmental	Open in IMG/M
3300012179	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012503	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014865	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10D	Environmental	Open in IMG/M
3300014866	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10D	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022208	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_4_1	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025951	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025959	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026053	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027360	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300034053	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.3	Engineered	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_142926391	3300000363	Soil	ASALEFNQRSASGGIATHEGKLKKDPAGVRAIVRATFEAMEFNRKEKTWMVNYIQNKWKLSPKVAEESYRVWLNGFTSDGKIPLQDLQEIYDEAFAAKLIPTTVPVAKVMDYTFVDQVLKEKR*
JGI11643J12802_117423443	3300000890	Soil	KLKKDPAGVRAIVRATFEAMEFNRKEKTWMVNYIQNKWKLSPKVAEESYRVWLNGFTSDGKIPLQDLQEIYDEAFAAKLIPTTVPVAKVMDYTFVDQVLKEKR*
JGI25405J52794_100006724	3300003911	Tabebuia Heterophylla Rhizosphere	MRAASGGIATREVKLKQEPAQVKAILRAIFETMDFNRREKPWMVSYIQNSWRLTASVAEEAYRYWLQGLTSDGKISLKDLQETYDQAYASQLIPTPVNAKSVMDYTPLDEMLKEKR*
Ga0055468_102162981	3300003993	Natural And Restored Wetlands	GIATHEGKLKKDPAGVKAIVRATFEAMEFNRREKSWMVNYIQNKWKLAPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSPVPVAKVIDYSWVDEVLKEKR*
Ga0055467_102351011	3300003996	Natural And Restored Wetlands	KGYREIASGPEYNLRSASGGIATREAKLRQEAAEVKTVIRATFDAMDFNRREKAWMVSYIQNKWKVAPKVAEESYEAWLNGFTHNGKIPLKDLQDIYDQAYATRLIPTPVPVPKVMDYGLLDEVLKERK*
Ga0055466_100788661	3300003997	Natural And Restored Wetlands	ALLSLPHNFVMTQKGYRELASALEFNQRSASGGIATREAKLKQEPEQVRAVIRATFEAMEFNRKEKSWMVNYIQNKWKLTPKVAEDSYRVWLNGFTADGKIPLNDLQQIYDEALAAKLIPSAVPVPKVMDYTWVDQVIRERR*
Ga0055496_100279101	3300004057	Natural And Restored Wetlands	FNMRSASGGMAIHEAKLKKDPAGVKMVIRAVFEAMDFNRREKTWMVNYIQGKWKVSAKTAEESYKAWLNGFTTDGKIPIKDLQEIYDQAYAAKLIPTPVPAAQVIDYTLTDEVFKERK*
Ga0055485_100930601	3300004067	Natural And Restored Wetlands	PPEAERMLNSGAEAKLKKDPAGVKTVIRAVFEAMDFNRREKTWMVNYIQGKWKVSAKTAEESYKAWLNGFTTDGKIPIKDLQEIYDQAYAAKLIPTPVPAAQVIDYTLTDEVFKERK*
Ga0063356_1009318542	3300004463	Arabidopsis Thaliana Rhizosphere	ALEFNQRSASGGIATHENKLKKDPAGVKAVIRGTFEAMEFNRREKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSAVPVAKVMDYAWVDEVLKEKR*
Ga0065716_10076211	3300005277	Arabidopsis Rhizosphere	GIATHESKLKKDPAGVKTMLRATFEAMEFNRKEKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSAVPVHKVMDYTLVDEVLKEKR*
Ga0065704_106172591	3300005289	Switchgrass Rhizosphere	GGIATREVKLKQEPAQVKAILRATFETMDFNRKEKSWMVSYIQNKWKLTPAVAEEAYRYWLQGLTNDGKIPLKDLQETYDQAYASQLIPTPVNVKNVMDYTPLDEMLKEKR*
Ga0065707_105743062	3300005295	Switchgrass Rhizosphere	SKLKKDPAGVKTMLRATFEAMEFNRKEKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSAVPVHKVMDYTLVDEVLKEKR*
Ga0065707_110311702	3300005295	Switchgrass Rhizosphere	RAASGGIATREVKLKQEPSQVKAILRSTFETMDFNRREKSWMISYIQNKWKLTPSVAEEAYRYWLQGLTSDGKIPLKDLQETYDQAYASQLIPTPVTAKNVMDYTLLDEMLKEKR*
Ga0070694_1014541432	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VREVASAPEFNLRSASGGIATHEAKLKKDPAGVKAVIRATFEAMDFNRREKTWMTNYIQNKWKVSPKVAEESYRAWLNGFTTDGKIPIKDLQEIYDQAFAAKLIPTQVPAAQVMDYSLTDEVYKEKR*
Ga0066652_1008618002	3300006046	Soil	MTQKGYRELASAMEFNQRSASGGIATRDAKLKQDPGQVKTVLRATLEAMEFNRKEKTWMVNYIQSKWKLTPRIAEESYLAWLSGLTSDGKIALKDLQEIYDSALASQLIPTPVPVPKVMDYTLIDEVLKDPK*
Ga0075417_100617651	3300006049	Populus Rhizosphere	RAASGGIATREVKLKQEPAQVKAVLRATFETMDFNRREKSWMISYIQNKWKLTASVAEEAYRYWLQGLTNDGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEALKEKR*
Ga0066659_102308283	3300006797	Soil	VIMTQKGYRDLASATEFNMRAASGGIATREVKLKQEPAQVKAVLRATFETMDFNRREKSWMISYIQNKWKLTPSVAEEAYRYWLQGLTNNGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR*
Ga0075433_115276772	3300006852	Populus Rhizosphere	RAASGGIATREVKLKQEPAQVKAVLRATFETMDFNRREKSWMISYIQNKWKLTASVAEEAYRYWLQGLTNEGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR*
Ga0075420_1011197551	3300006853	Populus Rhizosphere	THEAKLKKDPVGVKAVVRATFEAMEFNRREKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPIKDLQDIYDEALAAKLIPSAVPVAKVMDYTWVDEVIKEKR*
Ga0075434_1007195362	3300006871	Populus Rhizosphere	ASGGIATREVKLKQEPAQVKAVLRATFETMDFDRIEKSWMISYIQNKWKLTASVAEEAYRYWLQGLTNDGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR*
Ga0075434_1018756572	3300006871	Populus Rhizosphere	DLASATEFNMRAASGGIATREVKLKQEPAQVKAVLRATFETMDFNRREKSWMISYIQNKWKLTASVAEEAYRYWLQGLTNEGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR*
Ga0075419_102650792	3300006969	Populus Rhizosphere	MTQKGYRELASALEFNQRSASGGIATHEAKLKNDPAGVKAVVRATFEAMEFNRREKTWMVNYIQTKWKLTPKVAAESYRVWLNGFTSDGKIPIKDLQDIYDEALAAKLIPSAVPVAKVMDYTWVDEVIKEKR*
Ga0099791_106816931	3300007255	Vadose Zone Soil	QKGYRDLASATEFNMRAASGGIATREVKLKQEPAQVKAVLRATFETMDFNRREKSWMIRYIQNKWKLTPSVAEEAYRYWLQGLTNDGKIPLKDLQETYDQAYASQLIPTPVTVKSVMDYTQLDEVLKEKR*
Ga0066710_1004229252	3300009012	Grasslands Soil	MEFNQRSASGGIATRDAKLKQDPTQVKTVLRATLEAMEFNRKEKTWMVNYIQSKWKLTPRIAEESYLAWLSGLTSDGKIALKDLQEIYDSALASQLIPTPVPVPKVMDYTLIDEVLKDRK
Ga0105095_107183292	3300009053	Freshwater Sediment	VQKGYREVASGPEFNLRSASGGMATHEAKLKKDPAGVKAVIRAVFEAMDFNRKEKVWMVNYISNKWKIPAKVAEESYKSWLNGFTTDGKIPIKELQDIYDQAYASKLIPTPVPAAQVMDYSLTDEVFREKK*
Ga0105107_109248391	3300009087	Freshwater Sediment	REIASAAEFNLRSASGGIATHENKLKKDPAGVKAVIRATFEAMDFNRREKTWMVNYIQNKWKVSPKVAEESYRAWLNGFTTDGKIPIKDFQEIYDQAYESKLIPTPVPAAKVMDYTLTDEVFKEKR*
Ga0111539_109094663	3300009094	Populus Rhizosphere	MRAASGGIATREVKLKQEPAQVKAVLRATFETMDFNRREKSWMISYIQNKWKLTASVAEEAYRYWLQGLTNDGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEALKEKR*
Ga0075418_117030551	3300009100	Populus Rhizosphere	KLKNDPAGVKAVVRATFEAMEFNRREKTWMVNYIQTKWKLTPKVAAESYRVWLNGFTSDGKIPIKDLQDIYDEALAAKLIPSAVPVAKVMDYTWVDEVIKEKR*
Ga0066709_1045911361	3300009137	Grasslands Soil	NQRSASGGIATREAKLKQDPAQVKAVIQATFEAMDFNRKEKPWMVNYIQNKWKLTPKVAEESYRTWLSGFTSDGKIPLKDLQEIYDTALASQLIPTAVPVPKVMDYTLLEEVLKERR*
Ga0114129_100724706	3300009147	Populus Rhizosphere	LPHNFVMTQKGYREIASALEFNQRSASGGIATHESKLKKDPAGVKTVLRATFEAMEFNRKEKTWMVNYIQSKWRLTPKVAEESYRVWLNGFTSDGRIPLKDLQEIYDEAFAAKLIPSAVPVPKVMDYTLVDEVLKEKR*
Ga0114129_113108853	3300009147	Populus Rhizosphere	ASGGIATREVKLKQEPAQVKAVLRATFETMDFNRREKSWMISYIQNKWKLTASVAEEAYRYWLQGLTNEGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR*
Ga0105092_100257577	3300009157	Freshwater Sediment	GIATREAKLKQEPAQVKTVLRATLEAMEFNRKEKAWMVGYIQNKWKLTPKVAEECYRVWLNGFTADGKIPIKDFQEIYDIAYASQLIPTPVPVAKVIDYTLLDEVLKERK*
Ga0075423_120669501	3300009162	Populus Rhizosphere	VAAAVLSLPHNFVMTQKGYREIASALEFNQRSASGGIATHESKLKKDPAGVKTMLRATFEAMEFNRKEKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSAVPVHKVMDYTLVDEVLKEKR*
Ga0113563_131609902	3300009167	Freshwater Wetlands	SGGMAINEAKLKKDPAGVKTVIRAVFEAMDFNRREKNWMVNYIQNKWKVSAKVAEESYKSWLNGFTTDGKIPIKDLQEIYDQAFAAKLIPTPVPAAQVMDYTLTDEVFRERR*
Ga0136847_113235852	3300010391	Freshwater Sediment	AVLSLPHNVVMTQKGYREIASGPEFNLRSASGGIATHEAKLKKDPAGVKAVLRATFEAMDFNRREKTWMVNYIANKWKISAKVAEESYKSWLNGFTTDGKIPIKDLQDIYDQAFASKLIPTPVPTAQVMDYSLTDEVFKERR*
Ga0126383_129101222	3300010398	Tropical Forest Soil	MRAASGGIATREVKLKQEPAEVKAVLRATFETMDFNRREKSWMISYIQNKWKLTPSVAEAAYRYWLQGLTSDGKIPFKDLQETYDQAYASQLIPTPVHVKNVMDYTPLDEVLKEKR*
Ga0134127_106240641	3300010399	Terrestrial Soil	EVGSALEFNQRSASGGIATHENKLKKDPAGVKAVVRATFEAMEFNRKEKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSAVPVAKVMDYAWVDEVLKEKR*
Ga0134122_104712662	3300010400	Terrestrial Soil	HNFVMTQKGYRELGSALEFNQRSASGGIATHENKLKKDPAGVKAVIRGTFEAMEFNRRGKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSAVPVAKVMDYAWVDEVLKEKQ*
Ga0134123_106946071	3300010403	Terrestrial Soil	MVQKGYREIASATEFNLRSASGGIAAHENKLKKDPAGVKAVIRATLAAMDFNRREKAWMVNYIQSKWKVPTKVAEDSYRSWLSGLTTDGKIPVKELQDIYDQAYAAQLIPTPVPAAKVMDYTLTDEVLKEKK*
Ga0137462_11602022	3300011421	Soil	PHNVVMVQKGFREVASAPEFNLRSASGGIATHEAKLKKDPAGVKAVIRATFEAMDFNRREKVWMVNYIQNKWKVSAKVADESYRAWLNGFTTDGKIAIKDLQEIYDQAFASKLIPTQVPAAQVMDYSLTDEVYKEKR*
Ga0137425_10334461	3300011422	Soil	LASGPEFNLRSASGGIATHETKLKKDPAGVKAVIRAVFEAMNFNRKEKIWMVNYISNKWKIPAKVAEESYKSWLNGFTTDGKIPLKELQDIYDQAFAAKLIPTPVPAAQVMDYSLTDEVFKEKRN*
Ga0137448_10455512	3300011427	Soil	ASGGIATHEAKLKKDPAGVKAVLRATFEAMDFNRREKTWMVNYISNKWKISAKVAEESYKSWLDGFTTNGKIPLKDLQDIYDQAYASKLIPTPVPAAQVMDYTLIDEVLKERR*
Ga0137448_11667992	3300011427	Soil	HEAKLKKDPVGVKAVIRAVFEAMDFNRKEKTWMVNYISNKWKIPAKVAEESYKSWLNGFTTDGKIPIKELQDIYDQAFAAKLIPTPVPAAQVMDYSLTDEVFKEKRN*
Ga0137438_11947941	3300011431	Soil	SASGGIATHEAKLKKDRAGVKAVIRATSEAMDFNRKEKTWMVNYISNKWKISAKVAEESYRSWLNGFTTDGKIPLKELQEIYDQAYASKLIPTPVPAAQVMDYSLTDEVFKEKRN*
Ga0137464_10593702	3300011434	Soil	SATEFNMRSASGGLATREAKLKQEPAQVKTVIRATFEAMEFNRKEKAWMVNYIQNKWKLTPAIAEESYRAWLNGFTSDGKIPIKDFQEIYDTAYASKLIPTPVPVQKVIDYTFLDEVLKEKR*
Ga0137458_10981782	3300011436	Soil	LPHNVVMVQKGYREIASGPEFNLRSASGGMATHETKLKKDPAGVKAVIRAVFEAMDFNRKEKTWMVNYIQNKWKIPAKVAEESYKSWLNGFTTDGKIPIKELQDIYDQAFAAKLIPTPVPAAQVMDYSLTDEVFKEKRN*
Ga0137458_12139411	3300011436	Soil	HEAKLKKDPAGVKAVIRATFEAMDFNRREKTWMVNYISNKWKISAKVAEESYKSWLNGFTTDGKIPIKDLQEIYDQAFASKLIPTPVPAAQVMDYSLTDEVFKERR*
Ga0137429_11230311	3300011437	Soil	GGMAIHEAKLKKDPAGVKTVIRAVFEAMDFNRREKTWMVNYIQRKWKVSAKVAEESYKAWLNGFTTDGKIPINDLQEIYDQAYAAKLIPTLVPAAQVMDYTLTDEVFKERR*
Ga0137430_10475882	3300012041	Soil	LPHNVVMTQKGFREIASGPEFNLRSASGGIATHEAKLKKDRAGVKAVIRATFEAMDFNRKEKTWMVNYIATKWKISAKVAEESYKSWLNGFTTDGKISIKDLQDIYDQAFASKLIPTPVPAAQVMDYSLTDEVFREQK*
Ga0137320_11140691	3300012172	Soil	IASGPEFNLRSASGGIATHEAKLKKDRAGVKAVIRATFEAMDFNRKEKTWMVNYIATKWKISAKVAEESYKSWLNGFTTDGKISIKDLQDIYDQAFASKLIPTPVPAAQVMDYSLTDEVFREQK*
Ga0137334_10434712	3300012179	Soil	GSVAAAVLSLPHNVVMTQKGFREIASGPEFNLRSASGGIATHEAKLKKDRAGVKAVIRATFEAMDFNRKEKTWMVNYIATKWKISAKVAEESYKSWLNGFTADGKIPLKDLQDIYDQAYASKLIPTPVPAAQVMDYSLTDEVFREQK*
Ga0137382_100053626	3300012200	Vadose Zone Soil	MEFNQRSASGGIATRDAKLKQDPGQVKTVLRATLEAMEFNRKEKTWMVNYIQSKWKLTPRIAEESYLAWLSGLTSDGKIALKDLQEIYDSALASQLIPTPVPVPKVMDYTLIDEVLKDPK
Ga0137380_114995681	3300012206	Vadose Zone Soil	EPARVKAVLRATFETMDFNRREKSWMISYIQNKWKLTPSVAGEAYRYWLQGLTNDGKIPLKDLQETYDQAYSSQLIPTPVTVKNVMDYTLLDEVLKEKR*
Ga0137465_11461822	3300012231	Soil	KLKKDRAGVKAVIRATFEAMDFNRKEKTWMVNYIATKWKISAKVAEESYKAWLNGFTTDGKISIKDLQDIYDQAFASKLIPTPVPAAQVMDYSLTDEVFREQK*
Ga0157313_10633421	3300012503	Arabidopsis Rhizosphere	PHNFVMTQKGYRELSSALEFNQRSASGGIATHESKLKKDPAGVKTMLRATFEAMEFNRKEKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSAVPVHKVMDYTLVDEVLKEKR*
Ga0137394_102781873	3300012922	Vadose Zone Soil	IASALEFNQRSASGGIATHESKLKKDPAGVKTVLRATFEAMEFNRKEKTWMVDYIQSKWRLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFSAKLIPSAVPVPKVMDYTLVDEVLKEKR*
Ga0137394_104230012	3300012922	Vadose Zone Soil	VIMTQKGYRDLASATEFNMRAASGGIATREVKLKQEPAQVKAILRATFETMDFNRREKSWMISYIQNKWKLTPSVAEEAYRYWSQGLTNDGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLREKR*
Ga0137404_104965112	3300012929	Vadose Zone Soil	YRDLASATEFNMRAASGGIATREVKLKQEPAQVKAILRATFETMDFNRREKSWMISYIQNKWKLTPSVAEEAYRYWLQGLTNNGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR*
Ga0137404_115552132	3300012929	Vadose Zone Soil	YRDLASATEFNMRAASGGIATREVKLKQEPAQVKAVLRATFETMDFNRREKSWMIRYIQNKWKLTPSVAEEAYRYWLQGLTNDGKIPLKDLQETYDQAYASQLIPTPVTVKSVMDYTQLDEVLKEKR*
Ga0137407_124000361	3300012930	Vadose Zone Soil	ATEFNMRAASGGIATREVKLKQEPAQVKAILRATFETMDFNRREKSWMISYIQNKWKLTPSVAEEAYRYWLQGLTNDGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR*
Ga0137410_104817011	3300012944	Vadose Zone Soil	KGCRELASAMEFNQRSASGGIATRDAKLKQDPAQVKAVLRATLEAMEFNRKEKTWMVNYIQSKWKLTPRIAEESYLAWLSGLTSDGKIALKDLQEIYDSALASQLIPTPVPVPKVMDYTLIDEVLKERK*
Ga0180078_10415392	3300014865	Soil	RKGFREIASATEFNLRSASGGMATREAKLKQESAQVKAVIRATFEAMEFNRRERSWMVSYIQNKWKIAPGIAEECYRAWLNGFTSDGKIPLKDFQEIYDAAYAAQLIPTPVPVQKVVDYTLLDEVLKERR*
Ga0180090_10569661	3300014866	Soil	MRSASGGLATREAKLKQEPAQVKTVIRATFEAMEFNRKEKAWMVNYIQNKWKLTPAIAEESYRAWLNGFTSDGKIPIKDFQEIYDTAYASKLIPTPVPVQKVIDYTFLDEVLNEKR*
Ga0137409_105230081	3300015245	Vadose Zone Soil	KGCRELASAMEFNQRSASGGIATRDAKLKQDPGQVKTVLRATLEAMEFNRKEKTWMVNYIQSKWKLTPRIAEESYLAWLSGLTSDGKIALKDLQEIYDSALASQLIPTPVPVPKVMDYTLIDEVLKERK*
Ga0137403_100843344	3300015264	Vadose Zone Soil	MEFNQRSASGGIATRDAKLKQHPAQVKTVLRATLEAMEFNRKEKTWMVNYIQSKWKLTPRIAEESYLAWLSGLTSDGKIALKDLQEIYDSALASQLIPTPVPVPKVMDYTLIDEVLKDRK
Ga0137403_103270861	3300015264	Vadose Zone Soil	MSKVGDFVMTQKGYRELSSALEFNQRSASGGIATHESKLKKDPAGVKTMLRATFEAMEFNRKEKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSAVPVSKVMDYTLVDEVLKEKR*
Ga0132256_1000854304	3300015372	Arabidopsis Rhizosphere	LKKDPAGVKTMLRATFEAMEFNRKEKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSAVPVHKVMDYTLVDEVLKEKR*
Ga0132256_1020504211	3300015372	Arabidopsis Rhizosphere	AASGGIATREVKLKQESAQVKAVLRATFETMDFNRREKSWMIGYIQNQWKLTPAVAEEAYRYWLQGLTNDGKIPLKDLQETYDQAYVSQLIPTPVNVRAVMDYTPLDDVLKEKR*
Ga0187788_101611862	3300018032	Tropical Peatland	SASGGIATHEAKLKKDPGGVKAVIRATFEAMDFNRREKTWMVNYIQNKWKIAPKVAEESYRAWLNGFTHDGKIPIKELQDIYDQAYAAQLIPTPVPAAKVMDYTLTDEVFRERK
Ga0184621_100286023	3300018054	Groundwater Sediment	MTQKGYRDLASATEFNMRAASGGIATREVKLKQEPAQVKAILRATFETMDFNRREKSWMISYIQNKWKLTPSVAEEAYRYWLQGLTNDGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR
Ga0184637_100978111	3300018063	Groundwater Sediment	NVVMVQKGFRQVASAPEFNLRSASGGIATHEAKLKKDPAGVKAVIRATFEAMEFNRKEKTWMVNYIQNKWKVSPKVAEESYRAWLNGFTTDGKIPLKDLQEIYDQAFASKLIPTPVPAAQVMDYSLTDEVFKERR
Ga0187773_100305923	3300018064	Tropical Peatland	KLKKDPTGVKAVIRATFEAMDFNRREKTWMVNYIQNKWKITAKVAEESYRAWLNGFTHDGKIPIKELQDIYDQAYAAQLIPTPVPAAKVMDYTLTDEVFRERK
Ga0184635_103981561	3300018072	Groundwater Sediment	EPAQVKAVLRATFETMDLNRREKSWMISYIQNKWKLTPSVAEEAYRYWLQGLTNNGTIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKGKR
Ga0184624_102235281	3300018073	Groundwater Sediment	TREVKLKQEPAQVKAVLRATFETMDFNRREKSWMISYIQNKWKLTPSVGEEAYRYWLQGLTNDGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKGKR
Ga0184632_104088842	3300018075	Groundwater Sediment	LASATEFNMRSASGGIATREAKLKQEPAQVKAVLRATLESMDFNRREKSWMVNYIQNKWKLTAKVADESYRVWLNGFTAEGKIQLQDFQEIYDAAYAAQLIPTPVPVQKVVDYTLLNEVLKERR
Ga0184627_105842102	3300018079	Groundwater Sediment	ATHEAKLKKDPAGVKAVIRATFEAMDFNRREKTWMVNYIANKWKISAKVAEESYKSWLNGFTTDGKIPIKDLQDIYDQAYASKLIPTPVPAAQVMDYSLTDEVFKERR
Ga0190265_106643101	3300018422	Soil	LEFNQRSASGGIATHEAKLKKDPAGVKAIVRATFEAMEFNRREKTWMVNYVQNKWKLTPKVAEESYRVWLNGFTSDGKIPIKDLQDIYDEALAAKLIPSAVPVAKVMDYTWVDEVIKEKK
Ga0190274_107412552	3300018476	Soil	LRSASGGIPTHEAKLKKDPAGVKAVIRATFEAMDFNRREKTWMTNYIQNKWKVSPKVAEESYRAWLNGFTTDGKIPLKDLQDIYDQAFAAKLIPTQVPAAQVMDYSLTDEVYKEKR
Ga0163153_102977062	3300020186	Freshwater Microbial Mat	VVMVQKGYREVASGPEFNLRSASGGIATNEAKLKKDPAGVKAVIRAVFEAMDFNRKEKTWMVNYISNKWKIPAKVAEESYKSWLNGFTTDGKIPIKDLQDIYDQAFAAKLIPTPVPAAQVMDYSLTDEVFKERR
Ga0193719_100011331	3300021344	Soil	AKLKQDPAQVKTVLRATLEAMEFNRKEKTWMVNYIQSKWKLTPRIAEESYLAWLSGLTSDGKIALKDLQEIYDSALASQLIPTPVPVPKVMDYTLIDEVLKDRK
Ga0224495_102782372	3300022208	Sediment	PHNVTMVQKGYREIASGPEFNLRSASGGMATHEAKLKKEPAAVKTVIRAVFEAMDFNRKEKSWMVNYIQNKWKVSAKVAEESYKLWLNGFTTDGKIPIKELQDIYDQAFAAKLIPTPVPAAQVMDYSLTDEVFRERK
Ga0209108_105961551	3300025165	Soil	SQRNVAAALLSLPHNFVMTQKGYRELASALEFNQRSASGGIATREAKLKQEPEQVRAVIRATFEAMEFNRKEKSWMVKYIQNKWKLTPKVAEDSYRVWLNGFTSDGKIPLNDLQQIYDEALAAKLIPSAVPVPKVMDYTWVDEVIRERR
Ga0210143_10024621	3300025792	Natural And Restored Wetlands	QKGYRELASALEFNQRSASGGIATREAKLKQEPEQVRAVIRATFEAMEFNRKEKSWMVNYIQNKWKLTPKVAEDSYRVWLNGFTADGKIPLNDLQQIYDEALAAKLIPSAVPVPKVMDYTWVDQVIRERR
Ga0210113_10521242	3300025796	Natural And Restored Wetlands	REIASGPEFNLRSASGGIATREAKLKQEAAQVKTVIRATLEAMDFNRREKVWMVNYIQNKWKVAPKVAEESYKAWLNGFTADGKIPLKDFQEIYDQAYAAQLIPTPVPVAKVMDYTLLDEVSKERK
Ga0210066_10112751	3300025951	Natural And Restored Wetlands	MPPEAERMLNSGAEAKLKKDPAGVKTVIRAVFEAMDFNRREKTWMVNYIQGKWKVSAKTAEESYKAWLNGFTTDGKIPIKDLQEIYDQAYAAKLIPTPVPAAQVIDYTLTDEVFKERK
Ga0210116_10222331	3300025959	Natural And Restored Wetlands	YREVASAPEFNMRSASGGMAIHEAKLKKDPAGVKMVIRAVFEAMDFNRREKTWMVNYIQGKWKVSAKTAEESYKAWLNGFTTDGKIPIKDLQEIYDQAYAAKLIFTPVPAAQVIDYTLTDEVFKERK
Ga0208422_10159872	3300026053	Natural And Restored Wetlands	KLKKDPAGVKMVIRAVFEAMDFNRREKTWMVNYIQGKWKVSAKTAEESYKAWLNGFTTDGKIPIKDLQEIYDQAYAAKLIPTPVPAAQVIDYTLTDEVFKERK
Ga0207683_118659681	3300026121	Miscanthus Rhizosphere	ATEFNLRSASGGIAAHENKLKKDPAGVKAVIRATLAAMDFNRREKAWMVNYIQSKWKVPTKVAEDSYRSWLSGLTTDGKIPVKELQDIYDQAYAEQLIPTPVPAAKVMDYTLTDEALKEK
Ga0256867_103078521	3300026535	Soil	YRELASALEFNQRSASGGIATREAKLKQEPEQVRAVIRATFEAMEFNRKEKSWMVKYIQNKWKLTPKVAEDSYRVWLNGFTSDGKIPLNDLQQIYDEALAAKLIPSAVPVPKVMDYTWVDEVIRERR
Ga0209969_10132992	3300027360	Arabidopsis Thaliana Rhizosphere	EGKLKKDPAGVKAVVRATFEAMEFNRKEKSWMVNYIRNKWKLSAKVAEESYRVWLNGFTSDGKIPLKDLQDIYDEALAAKLIPSAVPVAKVMDYSYVDEVLKEKR
Ga0209968_10236752	3300027526	Arabidopsis Thaliana Rhizosphere	NQRSASGGIATHEGKLKKDPAGVRAIVRATFEAMEFNRKEKTWMVNYIQNKWKLSPKVAEESYRVWLNGFTSDGKIPLQDLQEIYDEAFAAKLIPTTVPVAKVMDYTFVDQVLKEKR
Ga0210002_10517502	3300027617	Arabidopsis Thaliana Rhizosphere	SGGIATHEGKLKKDPAGVRAIVRATFEAMEFNRKEKTWMVNYIQNKWKLSPKVAEESYRVWLNGFTSDGKIPLQDLQEIYDEAFAAKLIPTTVPVAKVMDYTFVDQVLKEKR
Ga0209966_10994582	3300027695	Arabidopsis Thaliana Rhizosphere	HESQLKKDPAGVKAVVRATFEAMEFNRKEKSWMVNYIRNKWKLSAKVAEESYRVWLNGFTSDGKIPLKDLQDIYDEALAAKLIPSAVPVAKVMDYSYVDEVLKEKR
Ga0209998_100125571	3300027717	Arabidopsis Thaliana Rhizosphere	LLSLPHNFVMMQKGYREIASALEFNQRSASGGIATHEGKLKKDPAGVRAIVRATFEAMEFNRKEKTWMVNYIQNKWKLSPKVAEESYRVWLNGFTSDGKIPLQDLQEIYDEAFAAKLIPTTVPVAKVMDYTFVDQVLKEKR
Ga0209797_103519912	3300027831	Wetland Sediment	GYREIASGPEFNLRSASGGIATNEAKLKKDPEGVKTVIRAVFEAMDFNRREKVWMINYIANKWKIPAKVAEDSYKAWLNGFTTDGKIPIKELQDIYNQAFAAKLIPTPVPAAQVMDYSLTDEVFRERK
Ga0209798_104466942	3300027843	Wetland Sediment	IASGPEFNLRSASGGIATNEAKLKKDPAGVKTVIRAVFEAMDFNRREKVWMVNYIANKWKIPAKVAEDSYKAWLNGFTTDGKIPIKELQDIYDQAFAAKLIPTPVPAAQVMDYSLTDEVYRERK
Ga0209481_100200783	3300027880	Populus Rhizosphere	MRAASGGIATREVKLKQEPAQVKAVLRATFETMDFNRIEKSWMISYIQNKWKLTASVAEEAYRYWLQGLTNDGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR
Ga0209481_101678082	3300027880	Populus Rhizosphere	ASGGIATHEAKLKNDPAGVKAVVRATFEAMEFNRREKTWMVNYIQTKWKLTPKVAAESYRVWLNGFTSDGKIPIKDLQDIYDEALAAKLIPSAVPVAKVMDYTWVDEVIKEKR
Ga0307473_102457531	3300031820	Hardwood Forest Soil	TQKGYRDLASATEFNMRAASGGIATREVKLKQEPAQVKAVLRATFETMDFNRRERSWMIRYIQNKWKLTPSVAEEAYRYWLQGLTNDGKIPLKDLQETYDQAYASQLIPTPVTVKSVMDYTQLDEVLKEKR
Ga0310904_111149911	3300031854	Soil	AKLKKDPAGVKTVIRAVFEAMDFNRREKNWMINYIQNKWKVSAKVAEESYKSWLNGFTTDGKIPIKDLQEIYDQAFAAKLIPTPVPAAQVMDYTLTDEVFRERR
Ga0315910_102372263	3300032144	Soil	LPHNVVMVQKGYREVASAPEFNLRSASGGIATHENKLKKDPAGVKAVIRATFEAMDFNRREKTWMVSYIQNKWKIPTKVAEESYRAWLNGFTTDGKIPIKDFQEIYDQAYESKLIPTPVPAAKVMDYSLTDEVFKEKR
Ga0315912_101831423	3300032157	Soil	YREIAAAPEFNMRSASGGMAIHEAKLKKDPAGVKTVIRAVFEAMDFNRREKNWMINYIQNKWKVSAKVAEESYKSWLNGFTTDGKIPIKDLQEIYDQAFAAKLIPTPVPAAQVMDYTLTDEVFRERR
Ga0335070_111141021	3300032829	Soil	LPHNVVMVQKGYREIASAPEYNMRSASGGIATHEAKLKKDPAGVKAVIRATFEAMDFNRREKTWMVNYIQNKWKITAKVAEESYRAWLNGFTTDGKIPIKDLQDIYDQAYAAQLIPTQVPAAKVMDYTYTDEVFRERK
Ga0316603_121980621	3300033413	Soil	FNMRSASGGMAIHDAKLKKDPAGVKTVIRAVFEAMDFNRREKTWMVNYIQSKWKVSAKVAEESYKAWLNGFTTDGKIPINDLQEIYDQAYAAKLIPTPVPAAQVMDYTLTDEVFKERR
Ga0316619_113391731	3300033414	Soil	HNVMMLQKGYREVASAPEFNMRSASGGMAIHDAKLKKDPAGVKTVIRAVFEAMDFNRREKTWMVNYIQSKWKVSAKVAEESYKAWLNGFTTDGKIPINDLQEIYDQAYAAKLIPTPVPAAQVMDYTLTDEVFKERR
Ga0316601_1003207501	3300033419	Soil	VLSLPHNVMMLQKGYREVASAPEFNMRSASGGMAIHEAKLKKDPAGVKVVIRAVFEAMDFNRREKTWMVNYIQNKWKVSAKVAEESYKAWLNGFTTDGKIPIKDLQEIYDQAFAAKLIPTPVPAAQVMDYTLTDEVFRERR
Ga0316630_115756602	3300033487	Soil	ASAPEFNMRSASGGMAIHEAKLKKDPAGVKVVIRAVFEAMDFNRREKTWMVNYIQNKWKVSAKVAEESYKAWLNGFTTDGKIPIKDLQEIYDQAFAAKLIPTPVPAAQVMDYTLTDEVFRERR
Ga0373890_088521_30_380	3300034053	Sediment Slurry	MRSASGGMAIHDAKLKKDPAGVKTVIRAVFEAMDFNRREKTWMVNYIQSKWKVSAKVAEESYKAWLNGFTTDGKIPINDLQEIYDQAYAAKLIPTPVPAAQVMDYTLTDEVFKERR
Ga0364931_0243988_3_395	3300034176	Sediment	MTQKGYRDLASATEFNMRAASGGIATREVKLKQEPAQVKAVLRATFETMDLNRREKSWMISYIQNKWKLTPSVAAEAYRYWLQGLTNNGTIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088580

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences