NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F088726

Metagenome Family F088726

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F088726
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 67 residues
Representative Sequence MNKQDIIGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETIEKEKEKQQ
Number of Associated Samples 74
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 87.16 %
% of genes near scaffold ends (potentially truncated) 19.27 %
% of genes from short scaffolds (< 2000 bps) 88.07 %
Associated GOLD sequencing projects 57
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (83.486 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(49.541 % of family members)
Environment Ontology (ENVO) Unclassified
(90.826 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(84.404 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 42.11%    β-sheet: 0.00%    Coil/Unstructured: 57.89%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF01807zf-CHC2 1.83
PF12705PDDEXK_1 1.83
PF02195ParBc 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0358DNA primase (bacterial type)Replication, recombination and repair [L] 1.83


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A83.49 %
All OrganismsrootAll Organisms16.51 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000949|BBAY94_10227917Not Available500Open in IMG/M
3300001735|JGI24520J20079_1008563Not Available593Open in IMG/M
3300001743|JGI24515J20084_1004437Not Available1277Open in IMG/M
3300002231|KVRMV2_100056972All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → unclassified Gimesia → Gimesia sp.3231Open in IMG/M
3300002511|JGI25131J35506_1054779Not Available553Open in IMG/M
3300002760|JGI25136J39404_1020889Not Available1187Open in IMG/M
3300003690|PicViral_1002711All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon4799Open in IMG/M
3300005605|Ga0066850_10271861Not Available601Open in IMG/M
3300006736|Ga0098033_1018275Not Available2189Open in IMG/M
3300006736|Ga0098033_1030083All Organisms → Viruses → Predicted Viral1650Open in IMG/M
3300006736|Ga0098033_1142598Not Available673Open in IMG/M
3300006738|Ga0098035_1049434Not Available1542Open in IMG/M
3300006738|Ga0098035_1122056Not Available898Open in IMG/M
3300006751|Ga0098040_1042519All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium1427Open in IMG/M
3300006753|Ga0098039_1098297All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium1008Open in IMG/M
3300006753|Ga0098039_1124966Not Available882Open in IMG/M
3300006753|Ga0098039_1179159Not Available721Open in IMG/M
3300006754|Ga0098044_1255723Not Available677Open in IMG/M
3300006789|Ga0098054_1136175Not Available910Open in IMG/M
3300006789|Ga0098054_1343705Not Available530Open in IMG/M
3300006841|Ga0068489_116436Not Available963Open in IMG/M
3300006923|Ga0098053_1014679All Organisms → Viruses → Predicted Viral1740Open in IMG/M
3300006924|Ga0098051_1173771Not Available566Open in IMG/M
3300006926|Ga0098057_1036243Not Available1220Open in IMG/M
3300006926|Ga0098057_1049719All Organisms → Viruses → Predicted Viral1030Open in IMG/M
3300006926|Ga0098057_1055559Not Available970Open in IMG/M
3300006926|Ga0098057_1092046Not Available739Open in IMG/M
3300006927|Ga0098034_1145599Not Available669Open in IMG/M
3300007514|Ga0105020_1086201Not Available2467Open in IMG/M
3300007515|Ga0105021_1173692Not Available1222Open in IMG/M
3300007515|Ga0105021_1261172Not Available875Open in IMG/M
3300008050|Ga0098052_1140826Not Available960Open in IMG/M
3300008216|Ga0114898_1022710Not Available2160Open in IMG/M
3300008216|Ga0114898_1025928Not Available1997Open in IMG/M
3300008216|Ga0114898_1052541Not Available1295Open in IMG/M
3300008217|Ga0114899_1014245Not Available3212Open in IMG/M
3300008217|Ga0114899_1079383Not Available1127Open in IMG/M
3300008217|Ga0114899_1163822Not Available718Open in IMG/M
3300008218|Ga0114904_1042836Not Available1208Open in IMG/M
3300008219|Ga0114905_1186794All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium674Open in IMG/M
3300009104|Ga0117902_1005074All Organisms → cellular organisms → Bacteria21648Open in IMG/M
3300009412|Ga0114903_1017557Not Available1894Open in IMG/M
3300009413|Ga0114902_1051554All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1191Open in IMG/M
3300009413|Ga0114902_1055599Not Available1133Open in IMG/M
3300009414|Ga0114909_1061394Not Available1088Open in IMG/M
3300009414|Ga0114909_1156944Not Available599Open in IMG/M
3300009418|Ga0114908_1057031Not Available1385Open in IMG/M
3300009481|Ga0114932_10111252Not Available1700Open in IMG/M
3300009604|Ga0114901_1120346Not Available809Open in IMG/M
3300009605|Ga0114906_1068896Not Available1313Open in IMG/M
3300009620|Ga0114912_1018388Not Available2010Open in IMG/M
3300010151|Ga0098061_1142205Not Available874Open in IMG/M
3300010153|Ga0098059_1408128Not Available513Open in IMG/M
3300010155|Ga0098047_10075131Not Available1323Open in IMG/M
3300011013|Ga0114934_10132633Not Available1188Open in IMG/M
3300017703|Ga0181367_1071573Not Available601Open in IMG/M
3300017704|Ga0181371_1022782Not Available1042Open in IMG/M
3300017775|Ga0181432_1052150Not Available1148Open in IMG/M
3300017775|Ga0181432_1237447Not Available574Open in IMG/M
3300021978|Ga0232646_1282098Not Available567Open in IMG/M
(restricted) 3300024052|Ga0255050_10020130Not Available1282Open in IMG/M
3300024344|Ga0209992_10087991Not Available1409Open in IMG/M
3300025042|Ga0207889_1008757Not Available955Open in IMG/M
3300025042|Ga0207889_1020552Not Available617Open in IMG/M
3300025046|Ga0207902_1047411Not Available537Open in IMG/M
3300025050|Ga0207892_1009082Not Available1033Open in IMG/M
3300025066|Ga0208012_1029297Not Available856Open in IMG/M
3300025066|Ga0208012_1031269All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium822Open in IMG/M
3300025069|Ga0207887_1054223Not Available654Open in IMG/M
3300025069|Ga0207887_1063218All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium605Open in IMG/M
3300025078|Ga0208668_1014041All Organisms → Viruses → Predicted Viral1693Open in IMG/M
3300025078|Ga0208668_1034607Not Available977Open in IMG/M
3300025078|Ga0208668_1051170Not Available765Open in IMG/M
3300025109|Ga0208553_1084943All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium746Open in IMG/M
3300025112|Ga0209349_1184991Not Available540Open in IMG/M
3300025114|Ga0208433_1148378Not Available553Open in IMG/M
3300025125|Ga0209644_1019310Not Available1473Open in IMG/M
3300025125|Ga0209644_1073084Not Available800Open in IMG/M
3300025125|Ga0209644_1079393Not Available768Open in IMG/M
3300025125|Ga0209644_1113776Not Available643Open in IMG/M
3300025125|Ga0209644_1119793Not Available626Open in IMG/M
3300025133|Ga0208299_1051295Not Available1573Open in IMG/M
3300025133|Ga0208299_1111728Not Available908Open in IMG/M
3300025251|Ga0208182_1001587Not Available10328Open in IMG/M
3300025251|Ga0208182_1004404Not Available4822Open in IMG/M
3300025251|Ga0208182_1041805Not Available989Open in IMG/M
3300025264|Ga0208029_1038689Not Available1061Open in IMG/M
3300025268|Ga0207894_1011458Not Available1675Open in IMG/M
3300025277|Ga0208180_1027880Not Available1625Open in IMG/M
3300025277|Ga0208180_1057848All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium970Open in IMG/M
3300025280|Ga0208449_1041296Not Available1286Open in IMG/M
3300025282|Ga0208030_1059757Not Available1053Open in IMG/M
3300025286|Ga0208315_1015578Not Available2500Open in IMG/M
3300025293|Ga0208934_1001627Not Available7499Open in IMG/M
3300025293|Ga0208934_1008166All Organisms → Viruses → Predicted Viral2424Open in IMG/M
3300025296|Ga0208316_1032049Not Available1217Open in IMG/M
3300025301|Ga0208450_1068711Not Available828Open in IMG/M
3300025873|Ga0209757_10146063Not Available739Open in IMG/M
3300025873|Ga0209757_10158510All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium710Open in IMG/M
3300025873|Ga0209757_10162850Not Available701Open in IMG/M
3300026115|Ga0208560_1018146Not Available643Open in IMG/M
3300032278|Ga0310345_10856869Not Available885Open in IMG/M
3300032820|Ga0310342_100999805Not Available981Open in IMG/M
3300032820|Ga0310342_101452268All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium815Open in IMG/M
3300034628|Ga0326755_005520Not Available1201Open in IMG/M
3300034629|Ga0326756_026813Not Available685Open in IMG/M
3300034629|Ga0326756_048415Not Available527Open in IMG/M
3300034654|Ga0326741_021351Not Available1148Open in IMG/M
3300034656|Ga0326748_048593Not Available597Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine49.54%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean28.44%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater4.59%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine3.67%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater2.75%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface2.75%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.83%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.92%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine0.92%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.92%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Fluids0.92%
Marine, Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume0.92%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.92%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface0.92%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000949Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94Host-AssociatedOpen in IMG/M
3300001735Marine viral communities from the Pacific Ocean - LP-45EnvironmentalOpen in IMG/M
3300001743Marine viral communities from the Pacific Ocean - LP-38EnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300003690Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assemblyEnvironmentalOpen in IMG/M
3300005605Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67EnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006841Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT234_2_0200mEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300007514Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate aEnvironmentalOpen in IMG/M
3300007515Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate bEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300009104Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2umEnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009604Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009620Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51EnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300017703Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaGEnvironmentalOpen in IMG/M
3300017704Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaGEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300021978Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Perseverance_CTD_V16A_01_btl17 _150kmerEnvironmentalOpen in IMG/M
3300024052 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_5EnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025042Marine viral communities from the Pacific Ocean - LP-47 (SPAdes)EnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025050Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025069Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)EnvironmentalOpen in IMG/M
3300025078Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025109Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025114Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025268Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)EnvironmentalOpen in IMG/M
3300025277Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)EnvironmentalOpen in IMG/M
3300025280Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)EnvironmentalOpen in IMG/M
3300025282Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)EnvironmentalOpen in IMG/M
3300025286Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)EnvironmentalOpen in IMG/M
3300025293Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2 (SPAdes)EnvironmentalOpen in IMG/M
3300025296Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231 (SPAdes)EnvironmentalOpen in IMG/M
3300025301Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300026115Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250 (SPAdes)EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300034628Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2961EnvironmentalOpen in IMG/M
3300034629Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600EnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M
3300034656Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
BBAY94_1022791713300000949Macroalgal SurfaceMEKQKMLGRALIKFSEAEIDLLLTALYNTEKINIPRIEPKWKKPFSKLIRDLIIIKNSIEKEKQL*
JGI24520J20079_100856333300001735MarineMNKQDIIGHALIKFSESEIDLILTALYNTEKLXIPRVKPKWKRPYTNLIKELLHIKETIEIEKEK
JGI24515J20084_100443753300001743MarineKGGTTMNKQDIIGHALIKFSESEIDLILTALYNTEKLDIPRVKSKWKRPYTNLIKELLHIKETIEREKEKQQ*
KVRMV2_10005697263300002231Marine SedimentMLGRALIKFSESEIDLLLTALYNTEKLNIPRIESKWKKPFSKLIRDLIIIKNSIEKEKQL
JGI25131J35506_105477923300002511MarineMNKQDIIGHALIKFSESEIDLILTALYNTEKLDIPRVKSKWKRPYTNLIKELLHIKETIEKEKEKQS*
JGI25136J39404_102088923300002760MarineMNKQDIIGHALIKFSESEIDLILTALYNTEKLEIPRVKPKWKRPYTNLIKELLHIKETIEIEKEKQS*
PicViral_100271133300003690Marine, Hydrothermal Vent PlumeMNRQDIIGHALIKFSESEIDLILTALYNTEKLDIPRVKSKWKRPYTNLIKELLHIKETIEREKEKQS*
Ga0066850_1027186123300005605MarineMKKQDLIGRAIIKFSEAEIDLLLTSLYNTEKINIPRINPKWKKPFSKLIRDLIFIKESIEKEKEKETIS*
Ga0098033_101827553300006736MarineMSKQDVTGHALIKFSEAEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEREKEKQQ*
Ga0098033_103008353300006736MarineMDKQDIVGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEKEKEKQQ*
Ga0098033_114259823300006736MarineMNKQDVIGHALIKFSEAEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLLIKETLEKEKERQQ*
Ga0098035_104943423300006738MarineMERQDLIGHALIKFSEAEIDLLLIALYNTEKINLPRVKSKWKRPFNNLIKDLLHIKKTIEKEKENRL*
Ga0098035_112205633300006738MarineMDKQDIVGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEKEKERQQ*
Ga0098040_104251943300006751MarineMEKEKLIGKAIIKFSEAEIDLLLIALYNTEKINLPRVKSKWKRPFNNLIKDLLHIKKTIEKEKENRL*
Ga0098039_109829733300006753MarineMNKQDMIGHALIKFSESEIDLLLTALYNTERIDIPRVKSKWKRPYTNLIKELLIIRKTIEKEKEKQQ*
Ga0098039_112496613300006753MarineMSKQDVIGHALIKFSEAEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEKEKEKQQ*
Ga0098039_117915923300006753MarineMNKQDIIGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETIEKEKEKQS*
Ga0098044_125572323300006754MarineMKKQDLIGRAIIKFSEAEIDLLLTSLYNTEKINIPRINPKWKKPFSKLIRDLIFIKESIEKEKEKETIS*RNHLQQNKERNLP*
Ga0098054_113617513300006789MarineMEKEKLIGKAIIKFSEAEIDLLLTSLYNTEKIYIPRINPKWKKPFSKLIRDLIFIKESIEKEKEKETIS*RNH
Ga0098054_134370523300006789MarineMDKQDMIGHALIKFSESEIDLILTALYNTEKINIPRIDAKWKRPFTNLIKELLHIKETLEKEKERQQ*
Ga0068489_11643613300006841MarineDMMGHALIKFSESEIDLLLTALYNTEKINIPRIDAKWKRPFTNLIKELLHIKETLEKEKERQQ*
Ga0098053_101467963300006923MarineMNKQDMIGHALIKFSESEIDLLLTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEREKEKQQ*
Ga0098051_117377113300006924MarineMEKEKLIGKAIIKFSEAEIDLLLTSLYNTEKINIPRMNPKWKKPFSKLIRDLIFIKNNIEKEKETIS*RNHL
Ga0098057_103624313300006926MarineMSKQDVTGHALIKFSEAEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETIEKEKEKQQ*
Ga0098057_104971923300006926MarineMSKQDVTGHALIKFSEAEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELMHIKETLEREKEKQQ*
Ga0098057_105555943300006926MarineMNKQDIVGRALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEKEKERQQ*
Ga0098057_109204633300006926MarineMNKQDVIGHALIKFSEAEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEKEKEKQQ*
Ga0098034_114559913300006927MarineMSKQDVTGHALIKFSEAEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEREKEKQS*
Ga0105020_108620163300007514MarineMKKQEMIGYALIKFSEAEIDLLLTALYNTEKINIPRIEPKWKKPFSKLIRDLILIKNNIAKEKESAV*
Ga0105021_117369213300007515MarineKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEKEKERQQ*
Ga0105021_126117233300007515MarineMKKQEMIGYALIKFSEAEIDLLLTALYNTEKINIPRIEPKWKKPFSKLIRDLILIKNNIAKEKESA
Ga0098052_114082623300008050MarineMEKQDIIGHALIKFSESEIDLLLTALYNTEKINIPRVKSKWKRPYTNLIKELLHIKETIEKEKERQQ*
Ga0114898_102271043300008216Deep OceanMNKQDMMGHALIKFSESEIDLILTALYNTEKINIPRTDAKWKRPYTNLIKELLHIKETIEKEKEKQQ*
Ga0114898_102592853300008216Deep OceanMDKQDIIGHALIKFSEAEIDLILTALYNTEKLSIPRVKSKWKRPYTNLIKELLHIKETIEKEKERQQ*
Ga0114898_105254153300008216Deep OceanMDKQDIIGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETIEKEKEKQS*
Ga0114899_101424573300008217Deep OceanMDKQDMIGRALIKFSESEIDLILTALYNTEKINIPRTDASWKRPYTNLIKELLHIKETLEKEKERQQ*
Ga0114899_107938343300008217Deep OceanMDKQDIIGHALIKFSEAEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKE
Ga0114899_116382233300008217Deep OceanMDKQDIIGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETIEKEKEKQQ*
Ga0114904_104283623300008218Deep OceanMNKQDMMGHALIKFSESEIDLLLTALYNTEKINIPRTDAKWKRPYTNLIKELLHIKETIEKEKEKQQ*
Ga0114905_118679423300008219Deep OceanMNKQDIIGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETIEKEKEKQQ*
Ga0117902_1005074253300009104MarineMDKQDMVGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEKEKERQQ*
Ga0114903_101755733300009412Deep OceanMSKQDMMGHALIKFSESEIDLLLTALYNTEKINIPRIDAKWKRPFTNLIKELLHIKETLEKEKERQQ*
Ga0114902_105155443300009413Deep OceanMSKQDMMGHALIKFSESEIDLLLTALYNTEKINIPRTDAKWKRPYTNLIKELLHIKETIEKEKEKQQ*
Ga0114902_105559913300009413Deep OceanIKFSEAEIDLILTALYNTEKLSIPRVKSKWKRPYTNLIKELLHIKETIEKEKERQQ*
Ga0114909_106139443300009414Deep OceanMQRQEMTGSALIKFSEAEIDLLLTALYNIEKITIPRVDPKWKSPFSKLIKDLIYIKNGIKKEKEK*
Ga0114909_115694413300009414Deep OceanIVRKNTIPRKGNKRIMDKQDMIGRALIKFSESEIDLILTALYNTEKINIPRTDASWKRPYTNLIKELLHIKETLEKEKERQQ*
Ga0114908_105703113300009418Deep OceanMQRQEMTGRALIKFSEAEIDLLLTALYNIEKITIPRVDPKWKSPFSKLIKDLIYIKNGIKKEKEK*
Ga0114932_1011125213300009481Deep SubsurfaceMEKQKMLGRALIKFSESEIDLLLTALYNTEKLNIPRIESKWKKPFSKLIRDLIIIKNSIEKEKQL*
Ga0114901_112034633300009604Deep OceanDKQDIIGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETIEKEKEKQS*
Ga0114906_106889613300009605Deep OceanMQRQEMIGRALIKFSEAEIDLLLTALYNIEKITIPRVDPKWKSPFSKLIKDLIYIKNGIKKEKEK*
Ga0114912_101838863300009620Deep OceanMNKQDMMGHALIKFSESEIDLLLTALYNTEKINIPRIDAKWKRPFTNLIKELLHIKETLEKEKERQQ*
Ga0098061_114220513300010151MarineMEKEKLIGKAIIKFSEAEIDLLLTSLYNTEKINIPRMNPKWKKPFSKLIRDLIFIKNNIEKEKETIS*
Ga0098059_140812833300010153MarineMNKQDVIGHALIKFSEAEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEKEKERQQ*
Ga0098047_1007513123300010155MarineMNKQDIIGHVLIKFSESEIDLLLTALYNTERIDIPRVKSKWKRPYTNLIKELLIIRKTIEKEKEKQQ*
Ga0114934_1013263343300011013Deep SubsurfaceMQKQEMTGRALIKFSEAEIDLLLTALYNIEKITIPRVDPKWKSPFSKLIKDLIYIKNGIKKEKEK*
Ga0181367_107157333300017703MarineMDKQDIVGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETIEKEKE
Ga0181371_102278243300017704MarineMKKQDLIGRAIIKFSEAEIDLLLTSLYNTEKINIPRINPKWKKPFSKLIRDLIFIKES
Ga0181432_105215033300017775SeawaterMEKQDMIGHVLIKFSESEVDLLLIALYNTEKINLPRVKSKWKKPFSKLIKDLITIKNNIVEEKEKQIXKNHP
Ga0181432_123744713300017775SeawaterHYKNVRKGGTTMNKQDIIGHALIKFSESEIDLILTALYNTEKLDIPRVKSKWKRPYTNLIKELLHIKETIEREKEKQS
Ga0232646_128209823300021978Hydrothermal Vent FluidsMGKQEIIGHALIKFSESEIDLILTALYNTEKINIPRVKSKWKRPYTNLIKELLHIKDKLEREKEKQK
(restricted) Ga0255050_1002013043300024052SeawaterMEKQKMLGRALIKFSESEIDLLLTALYNTEKLNIPRINPKWKKPFSKLIRDLIFIKESIEKEKETIS
Ga0209992_1008799153300024344Deep SubsurfaceMEKQKMLGRALIKFSESEIDLLLTALYNTEKLNIPRIESKWKKPFSKLIRDLIIIKNSIEKEKQL
Ga0207889_100875733300025042MarineMNKQDIIGHALIKFSESEIDLILTALYNTEKLEIPRVKPKWKRPYTNLIKELLHIKETIEIEKEKQS
Ga0207889_102055233300025042MarineMNKQDIIGHALIKFSESEIDLILTALYNTEKLDIPRVKSKWKRPYTNLIKELLHIKETIEIEKEKQQ
Ga0207902_104741113300025046MarineMNKQDMVGHALIRFSESEIDLILTALYNTEKINIPRVKPEWKRPYTNLIKELLHIKETIEKEKEKQI
Ga0207892_100908233300025050MarineMNKQDIIGHALIKFSESEIDLILTALYNTEKLDIPRVKSKWKRPYTNLIKELLHIKETIEREKEKQQ
Ga0208012_102929723300025066MarineMNKQDVIGHALIKFSEAEIDLILTALYNTEKINIPRIDAKWKRPFTNLIKELLHIKETLEKEKERQQ
Ga0208012_103126923300025066MarineMKKQDLIGRAIIKFSEAEIDLLLTSLYNTEKINIPRINPKWKKPFSKLIRDLIFIKESIEKEKEKETIS
Ga0207887_105422323300025069MarineMNKQDIIGHALIKFSESEIDLILTALYNTEKINIPRVKPEWKRPYTNLIKELLHIKETIEKEKEKQI
Ga0207887_106321833300025069MarineMNKQDIIGHALIKFSESEIDLILTALYNTEKLDIPRVKSKWKRPYTNLIKELLHIKETIEREKERQS
Ga0208668_101404153300025078MarineMDKQDIVGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEKEKEKQQ
Ga0208668_103460723300025078MarineMSKQDVTGHALIKFSEAEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEREKEKQQ
Ga0208668_105117013300025078MarineMDKQDIVGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEKEKERQQ
Ga0208553_108494323300025109MarineMERQDLIGHALIKFSEAEIDLLLIALYNTEKINLPRVKSKWKRPFNNLIKDLLHIKKTIEKEKENRL
Ga0209349_118499123300025112MarineMNKQDVIGHALIKFSEAEIDLILTALYNTEKLSIPRVKSKWKRPYTNLIKELLLIKETLEKEKEKQQ
Ga0208433_114837823300025114MarineMNKQDVIGHALIKFSEAEIDLILTALYNTEKLSIPRVKSKWKRPYTNLIKELLLIKETLEKEKERQQ
Ga0209644_101931033300025125MarineMNKQDIIGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETIEREKEKQS
Ga0209644_107308433300025125MarineMNKQDIIGHALIKFSESEIDLILTALYNTEKLDIPRVKPKWKRPYTNLIKELLHIKETIEREKEKQS
Ga0209644_107939333300025125MarineMNKQDIIGHALIKFSESEIDLILTALYNTEKLDIPRVKSKWKRPYTNLIKELLHIKETIEKEKEKQS
Ga0209644_111377633300025125MarineMSKQDVIGHALIKFSEAEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEREKEKQS
Ga0209644_111979313300025125MarineMSKQDVIGHALIKFSEAEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEREKEKQQ
Ga0208299_105129543300025133MarineMEKEKLIGKAIIKFSEAEIDLLLIALYNTEKINLPRVKSKWKRPFNNLIKDLLHIKKTIEKEKENRL
Ga0208299_111172823300025133MarineMEKQDIIGHALIKFSESEIDLLLTALYNTEKINIPRVKSKWKRPYTNLIKELLHIKETIEKEKERQQ
Ga0208182_100158773300025251Deep OceanMDKQDIIGHALIKFSEAEIDLILTALYNTEKLSIPRVKSKWKRPYTNLIKELLHIKETIEKEKERQQ
Ga0208182_100440443300025251Deep OceanMNKQDMMGHALIKFSESEIDLILTALYNTEKINIPRTDAKWKRPYTNLIKELLHIKETIEKEKEKQQ
Ga0208182_104180523300025251Deep OceanMDKQDIIGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETIEKEKEKQS
Ga0208029_103868943300025264Deep OceanMNKQDMMGHALIKFSESEIDLILTALYNTEKINIPRVKSKWKRPYTNLIKELLHIKETIEKEKE
Ga0207894_101145833300025268Deep OceanMSKQDVIGHALIKFSEAEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEKEKEKQQ
Ga0208180_102788063300025277Deep OceanDKQDIIGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETIEKEKEKQS
Ga0208180_105784823300025277Deep OceanMDKQDIIGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETIEKEKEKQQ
Ga0208449_104129613300025280Deep OceanMQRQEMTGRALIKFSEAEIDLLLTALYNIEKITIPRVDPKWKSPFSKLIKDLIYIKNGIKKEKEK
Ga0208030_105975723300025282Deep OceanMNKQDIIGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETIEKEKEKQS
Ga0208315_101557843300025286Deep OceanMDKQDMIGRALIKFSESEIDLILTALYNTEKINIPRTDASWKRPYTNLIKELLHIKETLEKEKERQQ
Ga0208934_1001627123300025293Deep OceanLIKFSEAEIDLILTALYNTEKLSIPRVKSKWKRPYTNLIKELLHIKETIEKEKERQQ
Ga0208934_100816673300025293Deep OceanMDKQDIIGHALIKFSEAEIDLILTALYNTEKLSIPRVKSKWKRPYTNLIKELLHIKETIE
Ga0208316_103204913300025296Deep OceanMMGHALIKFSESEIDLLLTALYNTEKINIPRIDAKWKRPFTNLIKELLHIKETLEKEKERQQ
Ga0208450_106871113300025301Deep OceanRKGNKRIMDKQDIIGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETIEKEKEKQS
Ga0209757_1014606333300025873MarineMNKQDIIGHALIKFSESEIDLILTALYNTEKLDIPRVKPKWKRPYTNLIKELLHIKETIEIEKEKQS
Ga0209757_1015851023300025873MarineMNKQDMVGHALIRFSESEIDLILTALYNTEKINIPRVKPKWKRPYTNLIKELLHIKETIEKEKEKQQ
Ga0209757_1016285013300025873MarineMNKQDIIGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETIEKEKEKQQ
Ga0208560_101814623300026115Marine OceanicMDKQDMVGHALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEKEKERQQ
Ga0310345_1085686923300032278SeawaterMNKQDITGHALIKFSEAEIDLLLTALYNTEKINIPRIDAKWKRPFTNLIKELLHIKETLEKEKERQQ
Ga0310342_10099980543300032820SeawaterMNKQDIVGRALIKFSESEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETLEKEKERQQ
Ga0310342_10145226833300032820SeawaterMSKQDVIGHALIKFSEAEIDLILTALYNTEKLNIPRVKSKWKRPYTNLIKELLHIKETIEKEKEKQQ
Ga0326755_005520_794_9973300034628Filtered SeawaterMNKQDIIGHALIKFSEAEIDLILSALYNTEKIDIPRVESNWKRPYTNLIKELLHIKETLEREKEKQS
Ga0326756_026813_15_2183300034629Filtered SeawaterMNKQDIIGHALIKFSEAEIDLILSALYNTEKIDIPRVKSSWKRPYTNLIKELLHIKETLEREKEKQS
Ga0326756_048415_157_3693300034629Filtered SeawaterVAAMSKQDVIGHVLIKFSEAEIDLILTALYNTEKIDIPRVKSKWKRPYTNLIKELLHIKETLERKKEKQS
Ga0326741_021351_80_2833300034654Filtered SeawaterMNRQDIIGHALIKFSESEIDLILTALYNTEKLDIPRVKSKWKRPYTNLIKELLHIKETIEREKEKQS
Ga0326748_048593_18_2213300034656Filtered SeawaterMNRQDIIGHALIKFSESEIDLILTALYNTEKLDIPRVKSKWKRPYTNLIKELLHIKETIEREKDKQS


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