NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F088738

Metagenome Family F088738

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F088738
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 60 residues
Representative Sequence MNLLPQTHKKRELTPQQEQFLELLFENGGQVTAAALDAGYSRGSAAWLKSTLSDEIIE
Number of Associated Samples 88
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 61.11 %
% of genes near scaffold ends (potentially truncated) 99.08 %
% of genes from short scaffolds (< 2000 bps) 93.58 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (87.156 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(27.523 % of family members)
Environment Ontology (ENVO) Unclassified
(85.321 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(98.165 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 33.72%    β-sheet: 4.65%    Coil/Unstructured: 61.63%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF03592Terminase_2 16.51
PF06067DUF932 2.75
PF08279HTH_11 1.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG3728Phage terminase, small subunitMobilome: prophages, transposons [X] 16.51


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A87.16 %
All OrganismsrootAll Organisms11.93 %
unclassified Hyphomonasno rankunclassified Hyphomonas0.92 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001971|GOS2215_10103134Not Available1611Open in IMG/M
3300002482|JGI25127J35165_1034337All Organisms → Viruses → Predicted Viral1150Open in IMG/M
3300005057|Ga0068511_1053732Not Available665Open in IMG/M
3300006025|Ga0075474_10165027Not Available691Open in IMG/M
3300006735|Ga0098038_1029157Not Available2065Open in IMG/M
3300006802|Ga0070749_10749115Not Available520Open in IMG/M
3300006810|Ga0070754_10140083Not Available1164Open in IMG/M
3300006810|Ga0070754_10288417All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Roseburia → Roseburia intestinalis739Open in IMG/M
3300006810|Ga0070754_10298105Not Available724Open in IMG/M
3300006810|Ga0070754_10410119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Melissococcus → Melissococcus plutonius592Open in IMG/M
3300006810|Ga0070754_10451416Not Available557Open in IMG/M
3300006869|Ga0075477_10158811Not Available941Open in IMG/M
3300006870|Ga0075479_10188933All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Melissococcus → Melissococcus plutonius830Open in IMG/M
3300006874|Ga0075475_10368955Not Available582Open in IMG/M
3300006916|Ga0070750_10017370All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3681Open in IMG/M
3300006920|Ga0070748_1258730Not Available625Open in IMG/M
3300006921|Ga0098060_1033605Not Available1554Open in IMG/M
3300006922|Ga0098045_1152905All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Melissococcus → Melissococcus plutonius530Open in IMG/M
3300006928|Ga0098041_1042517Not Available1475Open in IMG/M
3300006928|Ga0098041_1096524Not Available954Open in IMG/M
3300006929|Ga0098036_1096222Not Available910Open in IMG/M
3300006929|Ga0098036_1197375Not Available611Open in IMG/M
3300007234|Ga0075460_10058398Not Available1436Open in IMG/M
3300007234|Ga0075460_10275767Not Available556Open in IMG/M
3300007236|Ga0075463_10294286Not Available520Open in IMG/M
3300007344|Ga0070745_1094990Not Available1171Open in IMG/M
3300007345|Ga0070752_1088379Not Available1344Open in IMG/M
3300007345|Ga0070752_1314122Not Available595Open in IMG/M
3300007539|Ga0099849_1100137Not Available1156Open in IMG/M
3300007540|Ga0099847_1120602Not Available790Open in IMG/M
3300007960|Ga0099850_1115286All Organisms → Viruses → Predicted Viral1100Open in IMG/M
3300007963|Ga0110931_1084607Not Available957Open in IMG/M
3300007963|Ga0110931_1128815Not Available761Open in IMG/M
3300008012|Ga0075480_10106566Not Available1565Open in IMG/M
3300008012|Ga0075480_10440801Not Available635Open in IMG/M
3300009000|Ga0102960_1261247Not Available613Open in IMG/M
3300009071|Ga0115566_10145451Not Available1483Open in IMG/M
3300009077|Ga0115552_1338083Not Available598Open in IMG/M
3300009414|Ga0114909_1138031Not Available649Open in IMG/M
3300009418|Ga0114908_1152755Not Available740Open in IMG/M
3300009550|Ga0115013_10657650Not Available706Open in IMG/M
3300010149|Ga0098049_1042870Not Available1453Open in IMG/M
3300010296|Ga0129348_1080911Not Available1154Open in IMG/M
3300010297|Ga0129345_1139572Not Available879Open in IMG/M
3300010297|Ga0129345_1294349Not Available563Open in IMG/M
3300010316|Ga0136655_1258513Not Available518Open in IMG/M
3300010368|Ga0129324_10060072Not Available1714Open in IMG/M
3300012920|Ga0160423_10194930Not Available1413Open in IMG/M
3300017708|Ga0181369_1075553Not Available723Open in IMG/M
3300017717|Ga0181404_1032565All Organisms → Viruses → Predicted Viral1335Open in IMG/M
3300017717|Ga0181404_1090548Not Available752Open in IMG/M
3300017720|Ga0181383_1155503Not Available613Open in IMG/M
3300017721|Ga0181373_1015196Not Available1437Open in IMG/M
3300017728|Ga0181419_1030045Not Available1484Open in IMG/M
3300017729|Ga0181396_1063618Not Available738Open in IMG/M
3300017731|Ga0181416_1134707Not Available594Open in IMG/M
3300017739|Ga0181433_1134300Not Available588Open in IMG/M
3300017744|Ga0181397_1022942Not Available1824Open in IMG/M
3300017744|Ga0181397_1147828Not Available602Open in IMG/M
3300017745|Ga0181427_1077894Not Available813Open in IMG/M
3300017746|Ga0181389_1137130Not Available657Open in IMG/M
3300017755|Ga0181411_1164607Not Available634Open in IMG/M
3300017759|Ga0181414_1064413Not Available976Open in IMG/M
3300017763|Ga0181410_1133011Not Available705Open in IMG/M
3300017763|Ga0181410_1221525Not Available514Open in IMG/M
3300017764|Ga0181385_1198626Not Available606Open in IMG/M
3300017767|Ga0181406_1066733All Organisms → Viruses → Predicted Viral1104Open in IMG/M
3300017769|Ga0187221_1168684Not Available643Open in IMG/M
3300017770|Ga0187217_1013543Not Available2965Open in IMG/M
3300017772|Ga0181430_1134772Not Available722Open in IMG/M
3300017779|Ga0181395_1054878Not Available1310Open in IMG/M
3300017779|Ga0181395_1086243All Organisms → Viruses → Predicted Viral1012Open in IMG/M
3300017779|Ga0181395_1114880Not Available858Open in IMG/M
3300017783|Ga0181379_1040758Not Available1808Open in IMG/M
3300017783|Ga0181379_1236132Not Available634Open in IMG/M
3300017786|Ga0181424_10154172Not Available984Open in IMG/M
3300018048|Ga0181606_10542529Not Available603Open in IMG/M
3300018049|Ga0181572_10088082Not Available2047Open in IMG/M
3300018413|Ga0181560_10252168Not Available839Open in IMG/M
3300020176|Ga0181556_1289989Not Available564Open in IMG/M
3300020403|Ga0211532_10210322Not Available773Open in IMG/M
3300020450|Ga0211641_10459894Not Available610Open in IMG/M
3300020469|Ga0211577_10532319Not Available708Open in IMG/M
3300020470|Ga0211543_10282750Not Available808Open in IMG/M
3300021959|Ga0222716_10202643Not Available1255Open in IMG/M
3300021964|Ga0222719_10010926unclassified Hyphomonas → Hyphomonas sp.7500Open in IMG/M
3300021964|Ga0222719_10145291Not Available1679Open in IMG/M
3300021964|Ga0222719_10776788Not Available530Open in IMG/M
3300022074|Ga0224906_1177281Not Available590Open in IMG/M
3300022909|Ga0255755_1265465Not Available616Open in IMG/M
3300023087|Ga0255774_10236143Not Available919Open in IMG/M
3300023116|Ga0255751_10564453Not Available523Open in IMG/M
3300023176|Ga0255772_10263829Not Available934Open in IMG/M
3300025102|Ga0208666_1059001All Organisms → Viruses → Predicted Viral1047Open in IMG/M
3300025110|Ga0208158_1159524Not Available509Open in IMG/M
3300025132|Ga0209232_1151372Not Available740Open in IMG/M
3300025133|Ga0208299_1194101Not Available607Open in IMG/M
3300025138|Ga0209634_1299945Not Available553Open in IMG/M
3300025138|Ga0209634_1310121Not Available538Open in IMG/M
3300025267|Ga0208179_1091969Not Available610Open in IMG/M
3300025282|Ga0208030_1080675Not Available854Open in IMG/M
3300025655|Ga0208795_1066704All Organisms → Viruses → Predicted Viral1025Open in IMG/M
3300025671|Ga0208898_1101743Not Available871Open in IMG/M
3300025671|Ga0208898_1181907Not Available530Open in IMG/M
3300025674|Ga0208162_1043599All Organisms → Viruses → Predicted Viral1547Open in IMG/M
3300025769|Ga0208767_1242143Not Available571Open in IMG/M
3300025840|Ga0208917_1026896Not Available2408Open in IMG/M
3300027901|Ga0209427_11044483Not Available553Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous27.52%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater24.77%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine19.27%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh7.34%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient4.59%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean3.67%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine3.67%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water3.67%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine1.83%
Marine WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water0.92%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.92%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.92%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.92%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001971Marine microbial communities from the Sargasso Sea - GS000cEnvironmentalOpen in IMG/M
3300002482Marine viral communities from the Pacific Ocean - ETNP_2_30EnvironmentalOpen in IMG/M
3300005057Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2umEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009550Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 MetagenomeEnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017721Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaGEnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017729Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017739Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017763Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017769Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017772Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10EnvironmentalOpen in IMG/M
3300017779Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16EnvironmentalOpen in IMG/M
3300017783Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300018048Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018049Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018413Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011505AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020403Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)EnvironmentalOpen in IMG/M
3300020450Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300020470Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)EnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300022909Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaGEnvironmentalOpen in IMG/M
3300023087Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaGEnvironmentalOpen in IMG/M
3300023116Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaGEnvironmentalOpen in IMG/M
3300023176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaGEnvironmentalOpen in IMG/M
3300025102Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025110Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025282Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027901Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GOS2215_1010313433300001971MarineMNLLPQQKPKERALTPQQTAFLDILFENGGNVTQAAVDAGYSKGSSQWLKK
JGI25127J35165_103433723300002482MarineMTMNLLPQTHKKKELTQQQERFLELLFENGGQVTAAAVDAGYSRGSAAWLKSTLADEIVDRTKT
Ga0068511_105373233300005057Marine WaterMPQQPAKKRELTTQQSLFLDILFENGGNITAAATDAGYSVGSASWLRKTLADEIVE
Ga0075474_1016502713300006025AqueousMNLLPQQKPKQRQLTEQQSLFLEILFENGGNITAAATDAGYSVGSASWLRKTLADEIVERTKD
Ga0098038_102915713300006735MarineMNLLPQQKKKERELTPQQAQFLDILFENGGNVTAAAVDAGYSRGSAGWLRKNLAEEIVERTRDVLSVN
Ga0070749_1074911523300006802AqueousMNLLPQTHKKRELTPQQEQFLELLFENGGQVTAAALDAGYSRGSAAWLKSTLSDEIIERTKQ
Ga0070754_1014008313300006810AqueousMTMNLLPQTNKKRELTPQQEKFLDILFENGGRVTSAAVEAGYSQGSAAWLKSSLADEILE
Ga0070754_1028841713300006810AqueousMNLLPQTHKKRELTPQQEQFLELLFENGGQVTAAALDAGYSRGSAAWLKSTLSDEIIE
Ga0070754_1029810513300006810AqueousMNLLPQQKQKDRQLTPQQNQFLELLFENGGQVTAAALDAGYSRGSAAWLKSSLSDE
Ga0070754_1041011913300006810AqueousMNLLPQQKKKERELTTQQQAFLDLLFENGGNVTQAAVDAGYSRGSAVWL
Ga0070754_1045141623300006810AqueousVNLLPQPQVKKRELTPQQVQFLDILFENGGQVTAAAVDAGYAKGSAAWLRRHLADEIVDR
Ga0075477_1015881113300006869AqueousMNLLPQTHKKKELTQQQERFLELLFENGGQVTAAALDAGYSRGSAAWLKSTLADEIIERTKSV
Ga0075479_1018893313300006870AqueousMNLLPQTQKKKELSPQQEKFLDFLFENGGQVTAAAIDAGYSRGSAAWLRSTLADEIID
Ga0075475_1036895513300006874AqueousMNLLPQQKPKQRQLTEQQSLFLEILFENGGNITAAATDAGYSVGSASWLRKT
Ga0070750_1001737053300006916AqueousMNLLPQTHKKKELTPQQEKFLELLFENGGQVTAAALDAGYSRGSAAWLKSTLADEIVERTKSVLATNA
Ga0070748_125873033300006920AqueousMNLLPQTNKKRELTPQQEQFLELLFENGGQVTAAALDAGYSRGSAAWLKSTLSDE
Ga0098060_103360513300006921MarineMNLLPQQTPKKRELTPQQTQFLDILFENGGNVTAAAVDAGYSKGSAVWLRKTLAEEIVDRTKDV
Ga0098045_115290513300006922MarineMNLLPQQKQKDRQLTPQQSHFLELLFENGGQVTAAAIDAGYSRGSAAWLKASLADEIIERTKTIL
Ga0098041_104251713300006928MarineMNLLPQTHKKKELSPQQDKFLELLFENGGQVTAAAIDAGYSRGSAAWLKSTLADEIVERT
Ga0098041_109652413300006928MarineMNLLPQPRTKKRELTEKQTKFLDILFENGGQVTRAAVDAGYSEGSAGWLRKNLADEIVERTKD
Ga0098036_109622213300006929MarineMNLLPQQTPKKRELTPQQTQFLDILFENGGNVTAAAVDAGYSKGSAVWLRKTLADEIVDR
Ga0098036_119737523300006929MarineMNLLPQQKQKDRQLTPQQSHFLELLFENGGQVTAAAVDAGYSRGSAAWLKSTLADEII
Ga0075460_1005839823300007234AqueousMNLLPQTHKKRDLTQQQERFLELLFENGGQVTAAALDAGYSRGSAAWLKSTLADEIIERT
Ga0075460_1027576723300007234AqueousMNLLPQTHKKKELTQQQERFLELLFENGGQVTAAALDAGYSRGSAAWLKSTLADEIIERTKSVL
Ga0075463_1029428613300007236AqueousMNLLPQTQKKKELSPQQEKFLELLFENGGQVTAAAVDAGYSRGSAAWLRSTLADEIIDRTKT
Ga0070745_109499013300007344AqueousMNLLPQTQKKKELSPQQEKFLDFLFENGGQVTAAAIDAGYSRGSAAWLRSTLADEIIDRTKTV
Ga0070752_108837923300007345AqueousMNLLPQTHKKKELTQQQERFLELLFENGGQVTAAAIDAGYSRGSAAWLKSTLAD
Ga0070752_131412213300007345AqueousMNLLPQQKQKDRQLTPQQSHFLELLFENGGQVTAAALDAGYSRGSAAWLKSSLSDEIIERTKQVLAT
Ga0099851_107044723300007538AqueousMMNLLPQTHKKRELTPQQEQFLELLFENGGQVTAAALDAGY
Ga0099849_110013723300007539AqueousMNLLPQQQKKERELTPQQQKFLDILFENGGQVTAAAVDAGYSRGSAGWLRKHLADEIVERTK
Ga0099847_112060213300007540AqueousMNLLPQTHKKRDLTPQQEQFLELLFENDGQVTAAALDAGYSRGSAAWLKSTLSDEIIERT
Ga0099850_111528613300007960AqueousMNLLPQQKKERELTDQQQQFLSLLFENGGNVTAAALDAGYSRGSVGWLK
Ga0110931_108460723300007963MarineMNLLPQQRQKDRQLTPQQNHFLELLFENGGQVTAAAVDAGYSRGSAAWLKASLADEIIERTKTILATNAM
Ga0110931_112881513300007963MarineMNLLPQTHKKKELSPQQEQFLELLFENGGQVTAAAIDAGYSRGSAAWLKSTLADEIVERTKTILAT
Ga0075480_1010656633300008012AqueousMNLLPQTHKKRDLTPQQERFLELLFENGGQVTAAALDAGYSRGSAAW
Ga0075480_1044080113300008012AqueousMNLLPNQKKTRELTEQQQQFLSILFENGGNVTAAALDAGYSRGSVGWLKNTLAEEIVD
Ga0102960_126124723300009000Pond WaterMNLLPQTQKKKELSPQQEKFLDFLFENGGQVTAAAIDAGYSRGSAAWLRSTLADEII
Ga0115566_1014545113300009071Pelagic MarineVNLLPQTQVKKRELTPQQVQFLDILFENGGQVTAAAVDAGYAKGSAAWLRRHLADEIVDRTKDVLS
Ga0115552_133808313300009077Pelagic MarineMNLLPQQKQKDRQLTPQQNQFLELLFENGGQVTAAALDAGYSRGSAAWLKSSLSDEIIE
Ga0114909_113803113300009414Deep OceanMNLLPQPRTKKRELTEKQSKFLDILFENGGQVTRAAVDAGYSEGSAGWLRKNLADEIVERTKDVL
Ga0114908_115275523300009418Deep OceanMNLLPQQTPKKRELTPQQTQFLDILFENGGNVTQAGVDEGYSKGGAVWLPKTPAEEIVDRTKDI
Ga0115013_1065765013300009550MarineMNLLPQQKQKDRQLTPQQSHFLELLFENGGQVTAAAVDAGYSRGSAAWLKATLADEI
Ga0098049_104287023300010149MarineMNLLPQQRQKDRQLTPQQNHFLELLFENGGQVTAAAVDAGYSRGSAAWLK
Ga0129348_108091113300010296Freshwater To Marine Saline GradientMNLLPQTHKKRELTPQQEQFLELLFENGGQVTAAALDAGYSRGSAAWLKS
Ga0129345_113957213300010297Freshwater To Marine Saline GradientMNLLPQTHKKRELTPQQEQFLELLFENGGQVTAAALDAGYSRGSAAWLKSTLSDEIIERTKQVLATNA
Ga0129345_129434913300010297Freshwater To Marine Saline GradientMNLLPQTHKKRELTPQQEQFLELLFENGGQVTAAALDAGYSRGSAAWLK
Ga0136655_125851323300010316Freshwater To Marine Saline GradientMNLLPQQKPKQRQLTEQQSLFLEILFENGGNITAAATDAGYSVGSASWLRKTLA
Ga0129324_1006007213300010368Freshwater To Marine Saline GradientMNLLPQTHKKRELTPQQEQFLELLFENGGQVTAAALDAGYSRGSAAWLKSTLSDEIIERTKQVLATNALKAANR
Ga0160423_1019493033300012920Surface SeawaterMNLLPQQRKERVLTPQQTKFLELLFENGGNVTAAAVDAGYSRGSAQWLKQTLADEIIDRTKNILSVNAIKAAN
Ga0181369_107555323300017708MarineMNLLPQQKKKERELTPQQAQFLDILFENGGNVTAAAVDAGYSRGSAGWLRKNLAEEIVER
Ga0181404_103256533300017717SeawaterMNLLPQQKKTRQLTDQQQQFLSILFENGGNVTAAALDAGYSRGSVAWLKDTLSDEIVERT
Ga0181404_109054813300017717SeawaterMNLLPQQRQKDRQLTPQQNHFLELLFENGGQVTAAAVDAGYSRGSAAW
Ga0181383_115550313300017720SeawaterVNLLPQTQVKKRELTPQQVQFLDILFENGGQVTAAAVDAGYAKGSAAWLRKHLADEI
Ga0181373_101519633300017721MarineMNLLAQQHKKRELTPQQRTFLDNLFENGGNVTDAALSAGYSRGSVSWLKDSLSDEIISRTKNLLATNA
Ga0181419_103004523300017728SeawaterMNLLPQQRQKDRQLTPQQNQFLELLFENGGQVTAAAVDAGYSRGSAAWLKSTLSDEI
Ga0181396_106361813300017729SeawaterVNLLPQTQVKKRELTPQQVQFLDILFENGGQVTAAAVDAGYAKGSAAWLRRH
Ga0181416_113470713300017731SeawaterMNLLPQQKQKDRQLTPQQSHFLELLFENGGQVTAAAVDAGYSRGSAAWLRTTLAD
Ga0181433_113430013300017739SeawaterMNLLPQQKKTRQLTDQQQQFLSILFENGGNVTAAALDAGYSRGSVA
Ga0181397_102294263300017744SeawaterVNLLPQPQVKKRELTPQQVQFLDILFENGGQVTAAAVDAGYAKGSAAWLRRHLADEIVDRTKDVLSMNAL
Ga0181397_114782823300017744SeawaterMNLLPQQTPKKRELTPQQTQFLDILFENGGNVTQAAVDAGYSKGSAVWLRKTLAEEIVDR
Ga0181427_107789413300017745SeawaterMNLLPQQKQKDRQLTPQQNHFLELLFENGGQVTAAAVDAGYSRGSAAWLKASLADEIIERTKTILA
Ga0181389_113713013300017746SeawaterMNLLPQQKQKDRQLTPQQNHFLELLFENGGQVTAAAVDAGYSRGSAAWLKASLADE
Ga0181411_116460723300017755SeawaterMNLLPQPRTKKRELTEKQTKFLDILFENGGQVTRAAVDAGYSEGSAGWLRKNLADEIVERTKDVLSMNAFKAAT
Ga0181414_106441313300017759SeawaterMNLLPQQKQKDRQLTPQQNHFLELLFENGGQVTAAAVDAGYSRGSAAWLKASLADEIIERTK
Ga0181410_113301113300017763SeawaterMNLLPQQKKTRQLTDQQQQFLSILFENGGNVTAAALDAGYSRGSVAWLKDTLSDEIVERTKSLL
Ga0181410_122152513300017763SeawaterVNLLPQTQVKKRELTPQQVQFLDILFENGGQVTAAAVDAGYAKGSAAWLRRHLADEIVDRTKDV
Ga0181385_119862613300017764SeawaterMNLLPQTHKKKELSPQQEQFLELLFENGGQVTAAAVDAGYSRGSAAWLKSTLADEIVERTKTILATNAMKAAN
Ga0181406_106673313300017767SeawaterMNLLPQQKKTRQLTDQQQQFLSILFENGGNVTAAALDAGYSRGSVAWLKDTLSDEIVERTKSLLATNA
Ga0187221_116868423300017769SeawaterMNLLPQPRTKKRELTEKQSKFLDILFENGGQVTRAAVDAGYSEGSAGWLRK
Ga0187217_101354353300017770SeawaterMNLLPQQTPKKRELTPQQTQFLDILFENGGNVTAAAVDAGYSKGSAVWLRKTLAEEIVDRTTDILSMN
Ga0181430_113477213300017772SeawaterMNLLPQQKQKDRQLTPQQNQFLELLFENGGQVTAAALDAGYSRGSAAWLKSSLSDEIIERTKQVLATNAL
Ga0181395_105487813300017779SeawaterMNQLNLLPQQNKQRELTTQQVCFLDNLFENGGNISEAAIAAGYSRGSVGWLKQSLADEIIER
Ga0181395_108624313300017779SeawaterMNLLPQQKKTRQLTDQQQQFLSILFENGGNVTAAALDAGYSRGSVAWLKDTLSDEIV
Ga0181395_111488013300017779SeawaterMNLLPQQKQKERELTPQQRQFLDILFENGGNVTAAAVDAGYSRGSAGWLRKNLAKEIVERTRDVLSVN
Ga0181379_104075813300017783SeawaterMNLLPQQTPKKRELTPQQTQFLDILFENGGNVTQAAVDAGYSKGSAVWLRKT
Ga0181379_123613213300017783SeawaterMNLLPQTHKKKELTPQQEQFLDFLFENGGQVTAAAVDAGYSRGSAAWLRTTLA
Ga0181424_1015417213300017786SeawaterMNLLPQQRQKDRQLTPQQNHFLELLFENGGQVTAAAVDAGYSRGSAAWLKSTLSDEIIER
Ga0181606_1054252913300018048Salt MarshMNLLPQTHKKRELTPQQEQFLELLFENGGQVTAAALDAGYSRGSAAWLKSTLSDEI
Ga0181572_1008808233300018049Salt MarshMNLLPQQKKERVLTPQQTQFLELLFENGGNATAAAIDAGYSRGSVQWLKSTLAEEIIERTKNILSVNALKAANR
Ga0181560_1025216823300018413Salt MarshMNLLPQTHKKRELTPQQEQFLELLFENGGQVTAAALDAGYSRGSAAWLKSTLSDE
Ga0181556_128998913300020176Salt MarshMNLLPQTHKKRELTPQQEQFLELLFENGGQVTAAALDAGYSRGSAAWLKSTLSDEIIERTKQVLATNAL
Ga0211532_1021032213300020403MarineMNLLPKQYKERVLTPQQSQFLELLFENGGNVTQAAVDAGYSRGSAQWLKQTLADEIIERTKSILSVNAIKAA
Ga0211641_1045989413300020450MarineVNLLPQQKAKERALTPQQTAFLDILFENGGNVTQAAVDAGYSRGSSQWLKKTLADEIVERTKDILSVNAI
Ga0211577_1053231913300020469MarineMNLLPQPRTKKRELTEKQTKFLDILFENGGQVTRAAVDAGYSEGSAGWLRKNLADEIVERTKDVL
Ga0211543_1028275013300020470MarineMNLLAQQHKKRELTPQQRTFLDNLFENGGNVTDAALSAGYSRGSVSWLKDSLSDE
Ga0222716_1020264323300021959Estuarine WaterMNLLPQTQKKRDLTPQQETFLELLFENGGQVTAAAIDAGYSRGSAAWLKSTLSDEIIERTKQVLAT
Ga0222719_10010926163300021964Estuarine WaterMNLLPQQHKKRELTAQQQSFLDLLFENGGNVTQAALDAGYSRGSVTW
Ga0222719_1014529113300021964Estuarine WaterMNLLPQTHKKKELTPQQERFLELLFENGGQVTAAALDAGYSRGSAAWLKSTLADEIVERT
Ga0222719_1077678823300021964Estuarine WaterMNLLPQQRKKEREITPQQQKFLDLLFENGGQVTAAAVDAGYSRGSAGWLRKHLADEIVERTKDILSINALK
Ga0224906_117728123300022074SeawaterMNLLPQQKKTRQLTDQQQQFLSILFENGGNVTAAALDAGYSRGSVAW
Ga0255755_126546513300022909Salt MarshMNLLPQTHKKRELTPQQEQFLELLFENGGQVTAAALDAGYSRGSAAWLKSTLSDEIIERTKQV
Ga0255774_1023614313300023087Salt MarshMNLLPQQKKERVLTPQQTQFLELLFENGGNATAAAIDAGYSRGSVQWLKSTLAEEIIERTKNILSVNALKAAN
Ga0255751_1056445323300023116Salt MarshMNLLPQQKKERELTDQQQQFLSLLFENGGNVTAAALDAGYSRGSVGWLKQSLAEEIVDRTKSLLATNALKAA
Ga0255772_1026382913300023176Salt MarshMNLLPQQKKKRELTTQQQLFLDLLFENGGQVTAAAVDAGYSRGSAAWLRRNLADEI
Ga0208666_105900133300025102MarineMPQQPAKKRELTTQQSLFLDILFENGGNITAAATDAGYSVGSASWLRKTL
Ga0208158_115952413300025110MarineMNLLPQQRQKDRQLTPQQNHFLELLFENGGQVTAAAVDAGYSRGSAAWLKASLADEIIERTKTILATNAMKA
Ga0209232_115137213300025132MarineMNLLPKQYKERVLTPQQTQFLELLFENGGNVTQAAVDAGYSRGSAQWLKQTLADEIIDRT
Ga0208299_119410113300025133MarineMNLLPQVHKKKELSPQQDKFLELLFENGGQVTAAAIDAGYSRGSAAWLKSTLADEIVERTKTIL
Ga0209634_129994513300025138MarineVNLLPQPQVKKRELTPQQVQFLDILFENGGQVTAAAVDAGYAKGSAAWLRKHLAD
Ga0209634_131012113300025138MarineMNLLPQQKQKDRQLTPQQNQFLELLFENGGQVTAAALDAGYSRGSAAWLKSSLS
Ga0208179_109196923300025267Deep OceanMNLMPQQPAKKRELTPQQSQFLDILFENGGNITAAATDAGYSVGSASWLRKTLADEIVERTK
Ga0208030_108067513300025282Deep OceanMNLLPQPRTKKRELTEKQSKFLDILFENGGQVTRAAVDAGYSEGSAGWLRKNLADEIVERTKD
Ga0208795_106670413300025655AqueousMNLLPQQKKERELTDQQQQFLSLLFENGGNVTAAALDAGYSRGSVGWLKNTLAEEI
Ga0208898_110174313300025671AqueousMNLLPQTHKKKELTQQQERFLELLFENGGQVTAAAIDAGYSRGSAAWLKSTLADEIIERTKS
Ga0208898_118190713300025671AqueousMTMNLLPQTNKKRELTPQQEKFLDILFENGGRVTSAAVEAGYSQGS
Ga0208162_104359933300025674AqueousMNLLPQQKKERELTDQQQQFLSLLFENGGNVTAAALDAGYSRGSVGWLKN
Ga0208767_124214333300025769AqueousMNLMPQQPAKKRELTTQQSLFLDILFENGGNITAAATDAGYSVGSASWLRKTLADEIVERTK
Ga0208917_102689613300025840AqueousMNLLPQTHKKRDLTPQQERFLELLFENGGQVTAAALDAGYSRGSAAWLKSTLADEIIERTKSVLATNALKAANRLV
Ga0209427_1104448313300027901Marine SedimentMNLLPQTHKKRELTPQQEQFLELLFENGGQVTAAALDAGYSRGSAAWLKSTLSDEIIERTKQVLAT


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