NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F088806

Metagenome Family F088806

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F088806
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 63 residues
Representative Sequence MAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFEIKPPPSNNKQVEQ
Number of Associated Samples 59
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 65.14 %
% of genes near scaffold ends (potentially truncated) 39.45 %
% of genes from short scaffolds (< 2000 bps) 88.99 %
Associated GOLD sequencing projects 36
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (65.138 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(84.404 % of family members)
Environment Ontology (ENVO) Unclassified
(95.413 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(90.826 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 42.65%    Coil/Unstructured: 57.35%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF05565Sipho_Gp157 5.50
PF01870Hjc 0.92
PF03796DnaB_C 0.92
PF04098Rad52_Rad22 0.92
PF13479AAA_24 0.92
PF08774VRR_NUC 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 0.92
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 0.92
COG1591Holliday junction resolvase Hjc, archaeal typeReplication, recombination and repair [L] 0.92

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A65.14 %
All OrganismsrootAll Organisms34.86 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10027315All Organisms → Viruses → Predicted Viral2700Open in IMG/M
3300000116|DelMOSpr2010_c10061036All Organisms → Viruses → Predicted Viral1585Open in IMG/M
3300000116|DelMOSpr2010_c10074087All Organisms → Viruses → Predicted Viral1372Open in IMG/M
3300000116|DelMOSpr2010_c10105051Not Available1055Open in IMG/M
3300000116|DelMOSpr2010_c10108805All Organisms → Viruses → Predicted Viral1026Open in IMG/M
3300000117|DelMOWin2010_c10048713All Organisms → Viruses → Predicted Viral1888Open in IMG/M
3300000117|DelMOWin2010_c10084176All Organisms → Viruses → Predicted Viral1226Open in IMG/M
3300005512|Ga0074648_1054724All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1692Open in IMG/M
3300006025|Ga0075474_10043525Not Available1537Open in IMG/M
3300006025|Ga0075474_10050937All Organisms → Viruses → Predicted Viral1402Open in IMG/M
3300006025|Ga0075474_10124484Not Available820Open in IMG/M
3300006025|Ga0075474_10160196Not Available703Open in IMG/M
3300006025|Ga0075474_10234353Not Available555Open in IMG/M
3300006026|Ga0075478_10215452Not Available583Open in IMG/M
3300006027|Ga0075462_10030334All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes1741Open in IMG/M
3300006027|Ga0075462_10072043All Organisms → Viruses → Predicted Viral1086Open in IMG/M
3300006027|Ga0075462_10117784Not Available820Open in IMG/M
3300006637|Ga0075461_10132382Not Available770Open in IMG/M
3300006637|Ga0075461_10195850Not Available606Open in IMG/M
3300006637|Ga0075461_10209433Not Available581Open in IMG/M
3300006802|Ga0070749_10028870Not Available3474Open in IMG/M
3300006802|Ga0070749_10039394All Organisms → Viruses → Predicted Viral2910Open in IMG/M
3300006802|Ga0070749_10686230Not Available548Open in IMG/M
3300006810|Ga0070754_10185520Not Available977Open in IMG/M
3300006810|Ga0070754_10206452All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes913Open in IMG/M
3300006810|Ga0070754_10344078Not Available661Open in IMG/M
3300006867|Ga0075476_10205246Not Available716Open in IMG/M
3300006867|Ga0075476_10236419Not Available655Open in IMG/M
3300006867|Ga0075476_10272927All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes598Open in IMG/M
3300006867|Ga0075476_10301729Not Available561Open in IMG/M
3300006867|Ga0075476_10359323Not Available502Open in IMG/M
3300006868|Ga0075481_10018946Not Available2728Open in IMG/M
3300006868|Ga0075481_10197735Not Available719Open in IMG/M
3300006868|Ga0075481_10200066Not Available714Open in IMG/M
3300006869|Ga0075477_10071763Not Available1512Open in IMG/M
3300006869|Ga0075477_10310313Not Available625Open in IMG/M
3300006870|Ga0075479_10086776All Organisms → Viruses → Predicted Viral1305Open in IMG/M
3300006874|Ga0075475_10034498Not Available2437Open in IMG/M
3300006874|Ga0075475_10114264All Organisms → Viruses → Predicted Viral1209Open in IMG/M
3300006874|Ga0075475_10181252Not Available910Open in IMG/M
3300006916|Ga0070750_10013056Not Available4339Open in IMG/M
3300006916|Ga0070750_10412431Not Available562Open in IMG/M
3300006919|Ga0070746_10001352Not Available14671Open in IMG/M
3300006919|Ga0070746_10093547Not Available1506Open in IMG/M
3300006919|Ga0070746_10314239Not Available717Open in IMG/M
3300006919|Ga0070746_10317787All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes712Open in IMG/M
3300006919|Ga0070746_10481237Not Available548Open in IMG/M
3300007234|Ga0075460_10009591Not Available3868Open in IMG/M
3300007236|Ga0075463_10313708Not Available503Open in IMG/M
3300007344|Ga0070745_1103538All Organisms → Viruses → Predicted Viral1111Open in IMG/M
3300007345|Ga0070752_1271172Not Available654Open in IMG/M
3300007345|Ga0070752_1361112Not Available543Open in IMG/M
3300007346|Ga0070753_1215821Not Available705Open in IMG/M
3300007538|Ga0099851_1084151All Organisms → Viruses → Predicted Viral1223Open in IMG/M
3300007539|Ga0099849_1085988Not Available1267Open in IMG/M
3300007541|Ga0099848_1182241Not Available762Open in IMG/M
3300007640|Ga0070751_1333162Not Available560Open in IMG/M
3300007960|Ga0099850_1252893Not Available679Open in IMG/M
3300010296|Ga0129348_1066287All Organisms → Viruses → Predicted Viral1290Open in IMG/M
3300010297|Ga0129345_1122974Not Available950Open in IMG/M
3300010299|Ga0129342_1121454Not Available969Open in IMG/M
3300010300|Ga0129351_1119849Not Available1049Open in IMG/M
3300010368|Ga0129324_10417937Not Available517Open in IMG/M
3300010389|Ga0136549_10003368Not Available11831Open in IMG/M
3300019756|Ga0194023_1010682All Organisms → Viruses → Predicted Viral1842Open in IMG/M
3300019765|Ga0194024_1009840All Organisms → Viruses → Predicted Viral1990Open in IMG/M
3300022065|Ga0212024_1055569Not Available697Open in IMG/M
3300022065|Ga0212024_1103691Not Available507Open in IMG/M
3300022067|Ga0196895_1007120All Organisms → Viruses → Predicted Viral1187Open in IMG/M
3300022167|Ga0212020_1083012Not Available537Open in IMG/M
3300022168|Ga0212027_1010571All Organisms → Viruses → Predicted Viral1269Open in IMG/M
3300022176|Ga0212031_1080816Not Available554Open in IMG/M
3300022183|Ga0196891_1016410Not Available1426Open in IMG/M
3300022187|Ga0196899_1017063All Organisms → cellular organisms → Bacteria → Proteobacteria2738Open in IMG/M
3300022187|Ga0196899_1042338All Organisms → Viruses → Predicted Viral1534Open in IMG/M
3300022187|Ga0196899_1065621Not Available1144Open in IMG/M
3300022187|Ga0196899_1071205All Organisms → Viruses → Predicted Viral1083Open in IMG/M
3300022187|Ga0196899_1168745Not Available597Open in IMG/M
3300022198|Ga0196905_1046425All Organisms → Viruses → Predicted Viral1249Open in IMG/M
3300022200|Ga0196901_1028204All Organisms → Viruses → Predicted Viral2206Open in IMG/M
3300022200|Ga0196901_1091128Not Available1074Open in IMG/M
3300022200|Ga0196901_1110713Not Available948Open in IMG/M
3300025610|Ga0208149_1103440Not Available682Open in IMG/M
3300025610|Ga0208149_1116832Not Available630Open in IMG/M
3300025653|Ga0208428_1106453Not Available786Open in IMG/M
3300025655|Ga0208795_1028854All Organisms → Viruses → Predicted Viral1765Open in IMG/M
3300025671|Ga0208898_1008703Not Available5251Open in IMG/M
3300025671|Ga0208898_1129947Not Available712Open in IMG/M
3300025671|Ga0208898_1134575Not Available691Open in IMG/M
3300025671|Ga0208898_1154774Not Available614Open in IMG/M
3300025687|Ga0208019_1083763Not Available1013Open in IMG/M
3300025751|Ga0208150_1187570Not Available643Open in IMG/M
3300025769|Ga0208767_1086136All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1304Open in IMG/M
3300025769|Ga0208767_1110540Not Available1077Open in IMG/M
3300025771|Ga0208427_1181781Not Available678Open in IMG/M
3300025810|Ga0208543_1059048Not Available939Open in IMG/M
3300025818|Ga0208542_1027185All Organisms → Viruses → Predicted Viral1888Open in IMG/M
3300025818|Ga0208542_1046613All Organisms → Viruses → Predicted Viral1361Open in IMG/M
3300025840|Ga0208917_1095363All Organisms → Viruses → Predicted Viral1095Open in IMG/M
3300025853|Ga0208645_1060953All Organisms → Viruses → Predicted Viral1740Open in IMG/M
3300025853|Ga0208645_1110697All Organisms → Viruses → Predicted Viral1116Open in IMG/M
3300025853|Ga0208645_1288351Not Available522Open in IMG/M
3300025889|Ga0208644_1085368All Organisms → Viruses → Predicted Viral1601Open in IMG/M
3300027917|Ga0209536_101997540Not Available695Open in IMG/M
3300034374|Ga0348335_039498All Organisms → Viruses → Predicted Viral1950Open in IMG/M
3300034374|Ga0348335_095150Not Available956Open in IMG/M
3300034374|Ga0348335_184771Not Available524Open in IMG/M
3300034418|Ga0348337_081066All Organisms → Viruses → Predicted Viral1133Open in IMG/M
3300034418|Ga0348337_189166Not Available527Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous84.40%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine6.42%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient4.59%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.83%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.92%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment0.92%
Marine Methane Seep SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment0.92%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010389Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsfEnvironmentalOpen in IMG/M
3300019756Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MGEnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022067Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v3)EnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022168Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2)EnvironmentalOpen in IMG/M
3300022176Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025818Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1002731593300000116MarineMAMEWKNYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPSNKEEEQ*
DelMOSpr2010_1006103633300000116MarineMAMEWKEYSQTKPHKPDWYLVWVSGTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPTSND*
DelMOSpr2010_1007408743300000116MarineMAMEWKDCSQVKPQKPDWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEIKPPPFND*
DelMOSpr2010_1010505113300000116MarineTMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSINWWFEIKPPSSNDKQEEQ*
DelMOSpr2010_1010880523300000116MarineMTMNWQKYPSTKPHKPDWYLVWVSSTRYQAGYADIDYWDGTKWEFIRTSTNWWFEIKPPPSNNKQEEQ*
DelMOWin2010_1004871343300000117MarineMAMEWKDCSQVKPQKPDWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEITPPTSND*
DelMOWin2010_1008417623300000117MarineMAMEWKDYSQTKPHKPNWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEIEPPPFND*
Ga0074648_105472453300005512Saline Water And SedimentMTMNWQKYPSTKPHKPDWYLVWVSSTRYQAGYADIDYWDGTKWEFIRTSTNWWFEIKPPPTND*
Ga0075474_1004352553300006025AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFEITPPSNNKQEEQ*
Ga0075474_1005093733300006025AqueousMAMEWKNYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWSEIEPPPSNNKQVEQ*
Ga0075474_1012448413300006025AqueousMAMEWKDYSQTKPHKPNWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEIEPPPFNN*
Ga0075474_1016019613300006025AqueousWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSISWWFEIKPPPSNNKQVEQ*
Ga0075474_1023435313300006025AqueousWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFEIKPPSSNDKQEEQ*
Ga0075478_1021545223300006026AqueousMAMEWKDCSQVKPQKPDWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEIEPPPLND*
Ga0075462_1003033433300006027AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFEIKPPPSNNKQVEQ*
Ga0075462_1007204323300006027AqueousMAMEWKDYSQTKPHKPDWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEIKPPPFND*
Ga0075462_1011778433300006027AqueousMAMEWKDCSQVKPHKPNWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEIKP
Ga0075461_1013238213300006637AqueousPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSINWWFEIKPPPSNNKQVEQ*
Ga0075461_1019585033300006637AqueousMAMEWKDYSQTKPHKPDWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWW
Ga0075461_1020943313300006637AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFEIKPPSSNDKQEEQ*
Ga0070749_1002887013300006802AqueousEWKNYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPSNNKQEEQ*
Ga0070749_1003939443300006802AqueousMAMEWKDYSQTKPHKPDWYLVWVSGTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPTSNN*
Ga0070749_1068623023300006802AqueousMAMEWKDYSQTKPHKPNWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSISWWFEIEPPPSNN*
Ga0070754_1018552023300006810AqueousMAMEWKDCSQTKPHKPDWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEITPPTSND*
Ga0070754_1020645223300006810AqueousMAMEWKEYSQTKPHKPDWYLVWVSGTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPT
Ga0070754_1034407823300006810AqueousMAMEWKDCSQTKPHKPDWYLVWVSGTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPSNNKQE
Ga0075476_1020524623300006867AqueousMAMEWKDYSQTKPHKPNWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSISWWSEIEPPPSNNKQVEQ*
Ga0075476_1023641923300006867AqueousMEWKDCSQTKPHKPDWYLVWVSGTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPSNNKQ
Ga0075476_1027292713300006867AqueousMAMEWKEYSQTKPHKPDWYLVWVSGTRYQAGYADIDYWDGTKWEFIRTSSI
Ga0075476_1030172923300006867AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSSIWWCEITPPTSNN*
Ga0075476_1035932323300006867AqueousMAMEWKDYSQTKPHKPDWYLVWVSGTRYQAGYADIDYWDGTKWEVNRTSISWWFEIKPPPSNNKQVEQ*
Ga0075481_1001894683300006868AqueousKDCSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPSNNKQEEQ*
Ga0075481_1019773513300006868AqueousKDCSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSISWWFEIKPPPSNNKQVEQ*
Ga0075481_1020006633300006868AqueousMAMEWKNYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPSNNKQEEQ*
Ga0075477_1007176353300006869AqueousMAMEWKDCSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPSNNKQEEQ*
Ga0075477_1031031323300006869AqueousMAMEWKDCSQVKPQKPDWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEIEPPPFNN*
Ga0075479_1008677623300006870AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFEIEPPPFNN*
Ga0075475_1003449883300006874AqueousSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPSNNKQEEQ*
Ga0075475_1011426433300006874AqueousMAMEWKDCSQTKPHKPNWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEIEPPPFND*
Ga0075475_1018125213300006874AqueousMAMEWKDYSQTKPHKPNWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSISWWFEIKPPPSNNKQVEQ*
Ga0070750_10013056133300006916AqueousMAMEWKDYSQTKPHKPDWYLVWVSGTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPSNNKQEEQ*
Ga0070750_1041243133300006916AqueousMAMEWKDYSQTKPDNKGWHLVWVDSYYQVGYLDITYWDGTSWTFNVDTPISWWFEIEPPPFNN*
Ga0070746_10001352173300006919AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPSNNKQEEQ*
Ga0070746_1009354713300006919AqueousTKPHKPDWYLVWVSSTRYQAGYADIDYWDGTKWEFIRTSTNWWFEIKPPPSNNKQEEQ*
Ga0070746_1031423913300006919AqueousYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSISWWFEIKPPPSNNKQVEQ*
Ga0070746_1031778713300006919AqueousMAMEWKEYSQTKPHKPDWYLVWVSGTRYQAGYADIDYWDGTKWEFIRTSSNW
Ga0070746_1048123713300006919AqueousEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFEIKPPPSNNKQVEQ*
Ga0075460_10009591123300007234AqueousQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFEITPPSNNKQEEQ*
Ga0075463_1031370813300007236AqueousMAMEWKDCSQVKPQKPDWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEIEPPPSNNKQVEQ*
Ga0070745_110353813300007344AqueousMAMEWKDYSQTKPHKPDWYLVWVSGTRYQAGYADIDYWDGTKWEFIRTSTNWWFEIKPPPTN
Ga0070752_127117213300007345AqueousMAMEWKDCSQTKPHKPDWYLVWVSGTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPSNNK
Ga0070752_136111213300007345AqueousMAMEWKDCSQTKPHKPNWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSIN
Ga0070753_121582133300007346AqueousMNWQKYPSTKPHKPDWYLVWVSSTRYQAGYADIDYWDGTKWEFIRTSTNWWFEIKPPPSNNKQEEQ*
Ga0099851_108415123300007538AqueousMAMEWKDYSQVKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSINWWSEIEPPPSNNKQVEQ*
Ga0099849_108598823300007539AqueousMAMEWKDYSQVKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSISWWFEIEPPPSNNKKVEQ*
Ga0099848_118224123300007541AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSINWWHEITPPTLND*
Ga0070751_133316213300007640AqueousTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSISWWFEIEPPPSNNKQVEQ*
Ga0099850_125289323300007960AqueousMNWQKYPSTKPHKPDWYLVWVSGTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITP
Ga0129348_106628743300010296Freshwater To Marine Saline GradientMAMEWKDYSQVKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWSE
Ga0129345_112297423300010297Freshwater To Marine Saline GradientMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSISWWFEIEPPPSNNKKVEQ*
Ga0129342_112145433300010299Freshwater To Marine Saline GradientMAMEWKDYSQVKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSISWWFEIEPPPSNNKQVEQ*
Ga0129351_111984923300010300Freshwater To Marine Saline GradientMAMEWKDCSQVKPQKPDWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEIESPPSNNKQEEQ*
Ga0129324_1041793713300010368Freshwater To Marine Saline GradientKPHKPDWYLVWVSGTRYQAGYADIDYWDGTKWEFIRTSISWWFEIEPPPSNDKQR*
Ga0136549_10003368213300010389Marine Methane Seep SedimentMAMEWKDYSQTKPHKPNWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWCEITPPTSND*
Ga0194023_101068273300019756FreshwaterMAMEWKDYSQTKPHKPDWYLVWVSGTRYQAGYADIDYWDGTKWEVNRTSISWWFEIKPP
Ga0194024_100984013300019765FreshwaterMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFEIKPPPSNNKQEEQ
Ga0212024_105556913300022065AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFEIKPPPSNNKQVEQ
Ga0212024_110369113300022065AqueousMTMNWQKYPSTKPHKPDWYLVWVSSTRYQAGYADIDYWDGTKWEFIRTSTNWWFEIKPPPSNNKQEEQ
Ga0196895_100712043300022067AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSINWWFEIKPPPSNNKQVEQ
Ga0212020_108301213300022167AqueousYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPSNNKQEEQ
Ga0212027_101057133300022168AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSISWWFEIEPPPSNNKQVEQ
Ga0212031_108081623300022176AqueousMAMEWKDYSQVKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSISWWFEIEPPPSNNKKVEQ
Ga0196891_101641023300022183AqueousMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFEIKPPPSNNKQVEQ
Ga0196899_101706323300022187AqueousMAMEWKDCSQTKPHKPDWYLVWVSGTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPSNNKQEEQ
Ga0196899_104233833300022187AqueousMNWQKYPSTKPHKPDWYLVWVSSTRYQAGYADIDYWDGTKWEFIRTSTNWWFEIKPPPSNNKQEEQ
Ga0196899_106562123300022187AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFEIKPPSSNDKQEEQ
Ga0196899_107120523300022187AqueousMAMEWKDYSQTKPHKPNWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEIKPPPFND
Ga0196899_116874523300022187AqueousHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFEITPPSNNKQEEQ
Ga0196905_104642533300022198AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSINWWHEITPPTLND
Ga0196901_102820473300022200AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWSEIEPPPSNNKQVEQ
Ga0196901_109112833300022200AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSINWWSEIEPPPSNNKQVEQ
Ga0196901_111071323300022200AqueousMAMEWKDCSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPSNNKQEEQ
Ga0208149_110344013300025610AqueousMAMEWKNYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWSEIEPPPSNNKQVEQ
Ga0208149_111683213300025610AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFE
Ga0208428_110645313300025653AqueousGRTMAMEWKDCSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSISWWFEIEPPPSNNKQVEQ
Ga0208795_102885413300025655AqueousTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSINWWHEITPPTLND
Ga0208898_1008703123300025671AqueousMAMEWKDCSQTKPHKPDWYLVWVSGTRYQAGYADIDYWDGTKWEFIRTSSNWWCEIT
Ga0208898_112994723300025671AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFEITPPSNNKQEEQ
Ga0208898_113457523300025671AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSISWWFEIEPPPSNNKQVEQ
Ga0208898_115477413300025671AqueousMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFEIKPPSSNDKQEEQ
Ga0208019_108376333300025687AqueousWKDYSQVKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSISWWFEIEPPPSNNKKVEQ
Ga0208150_118757033300025751AqueousMAMEWKNYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFEITPPSNNK
Ga0208767_108613623300025769AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSISWWFEIKPPPSNNKQVEQ
Ga0208767_111054033300025769AqueousKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWFEIKPPPSNNKQVEQ
Ga0208427_118178123300025771AqueousMAMEWKDYSQTKPHKPDWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSISWWFEIEPPPSNNKQVEQ
Ga0208543_105904813300025810AqueousMAMEWKDYSQTKPHKPDWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEIEPPPSNNKQVEQ
Ga0208542_102718523300025818AqueousMAMEWKDYSQTKPHKPDWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEIKPPPFND
Ga0208542_104661343300025818AqueousMAMEWKNYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWSE
Ga0208917_109536313300025840AqueousMAMEWKNYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSINWWF
Ga0208645_106095323300025853AqueousMAMEWKDCSQVKPHKPNWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEIEPPPFND
Ga0208645_111069733300025853AqueousETMAMEWKDYSQTKPHKPDWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEIEPPPFNN
Ga0208645_128835123300025853AqueousMAMEWKDYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSISWWFEIEPPPSNNKQ
Ga0208644_108536823300025889AqueousMAMEWKDYSQTKPHKPDWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEIEPPPFNN
Ga0209536_10199754023300027917Marine SedimentMAMEWKDYSQTKPHKPDWYLVWVSGTRYQAGYADIDYWDGTKWEVNRTSINWWFEIESPPSNNKQEEQ
Ga0348335_039498_59_2503300034374AqueousMAMEWKDCSQVKPQKPDWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEIEPPPLND
Ga0348335_095150_104_2953300034374AqueousMAMEWKDCSQTKPHKPDWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSINWWFEITPPTSND
Ga0348335_184771_68_2743300034374AqueousMAMEWKDYSQTKPHKPDWYLVWVSSTRYQAGYADIDYWDGTKWEVNRTSISWWFEIKPPPSNNKQVEQ
Ga0348337_081066_524_7303300034418AqueousMAMEWKNYSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEVNRTSISWWFEIEPPPSNNKQVEQ
Ga0348337_189166_1_1743300034418AqueousMEWKDCSQTKPHKPDWYLVWVSDTRYQAGYADIDYWDGTKWEFIRTSSNWWCEITPPS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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