Metagenome / Metatranscriptome Family F088863

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088863
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	68 residues
Representative Sequence	MSKQAGPEAAVSQIWMPGADRSYAAAHDWISQTAAAGKTPCLPDEEKPAEGEDLAGALVPMVPGEHPA
Number of Associated Samples	71
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.99 %
% of genes near scaffold ends (potentially truncated)	16.51 %
% of genes from short scaffolds (< 2000 bps)	77.06 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.734 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (40.367 % of family members)
Environment Ontology (ENVO)	Unclassified (48.624 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.890 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.04% β-sheet: 0.00% Coil/Unstructured: 73.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00583	Acetyltransf_1	12.84
PF00821	PEPCK_GTP	3.67
PF13302	Acetyltransf_3	1.83
PF00589	Phage_integrase	1.83
PF02979	NHase_alpha	1.83
PF02211	NHase_beta	0.92
PF00582	Usp	0.92
PF13561	adh_short_C2	0.92
PF11578	DUF3237	0.92
PF07704	PSK_trans_fac	0.92
PF13701	DDE_Tnp_1_4	0.92
PF12900	Pyridox_ox_2	0.92
PF13613	HTH_Tnp_4	0.92
PF13546	DDE_5	0.92
PF00296	Bac_luciferase	0.92
PF11774	Lsr2	0.92
PF12681	Glyoxalase_2	0.92
PF00484	Pro_CA	0.92
PF00768	Peptidase_S11	0.92
PF03466	LysR_substrate	0.92
PF00561	Abhydrolase_1	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent	Energy production and conversion [C]	3.67
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.92
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.92
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.92
COG4423	Uncharacterized conserved protein	Function unknown [S]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.73 %
Unclassified	root	N/A	19.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.73 %
Unclassified	root	N/A	19.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.73 %
Unclassified	root	N/A	19.27 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	77.06 %
Unclassified	root	N/A	19.27 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.92 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	77.06 %
Unclassified	root	N/A	19.27 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	66.06 %
Unclassified	root	N/A	19.27 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.27 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	13.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.27 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.76 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10003089	All Organisms → cellular organisms → Bacteria	12073	Open in IMG/M
3300000567\|JGI12270J11330_10007104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7742	Open in IMG/M
3300000567\|JGI12270J11330_10162533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	818	Open in IMG/M
3300001356\|JGI12269J14319_10004852	All Organisms → cellular organisms → Bacteria	12137	Open in IMG/M
3300001356\|JGI12269J14319_10008625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8514	Open in IMG/M
3300001356\|JGI12269J14319_10246363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	669	Open in IMG/M
3300003218\|JGI26339J46600_10082585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	808	Open in IMG/M
3300003219\|JGI26341J46601_10008576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3354	Open in IMG/M
3300003368\|JGI26340J50214_10099410	Not Available	747	Open in IMG/M
3300004152\|Ga0062386_100747363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300006059\|Ga0075017_101396966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300006086\|Ga0075019_11090764	Not Available	518	Open in IMG/M
3300006573\|Ga0074055_10176200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529	Open in IMG/M
3300006577\|Ga0074050_11766110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300006605\|Ga0074057_10910356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	666	Open in IMG/M
3300009520\|Ga0116214_1123661	Not Available	956	Open in IMG/M
3300009521\|Ga0116222_1001170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14783	Open in IMG/M
3300009521\|Ga0116222_1074182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1469	Open in IMG/M
3300009522\|Ga0116218_1416973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	599	Open in IMG/M
3300009522\|Ga0116218_1498769	Not Available	543	Open in IMG/M
3300009523\|Ga0116221_1232589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	797	Open in IMG/M
3300009524\|Ga0116225_1087372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1455	Open in IMG/M
3300009525\|Ga0116220_10000619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13900	Open in IMG/M
3300009645\|Ga0116106_1127570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	818	Open in IMG/M
3300009683\|Ga0116224_10565122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300009698\|Ga0116216_10223250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1153	Open in IMG/M
3300009698\|Ga0116216_10506008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300009698\|Ga0116216_10605380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300009698\|Ga0116216_10715202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602	Open in IMG/M
3300009764\|Ga0116134_1000887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15298	Open in IMG/M
3300010379\|Ga0136449_100470914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2195	Open in IMG/M
3300010379\|Ga0136449_100944787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1397	Open in IMG/M
3300010379\|Ga0136449_100950433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1392	Open in IMG/M
3300010379\|Ga0136449_101205552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1191	Open in IMG/M
3300010379\|Ga0136449_101499137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1033	Open in IMG/M
3300010379\|Ga0136449_101748623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	934	Open in IMG/M
3300010379\|Ga0136449_102529776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300010379\|Ga0136449_103246720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300010379\|Ga0136449_104314541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300012207\|Ga0137381_10531357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1026	Open in IMG/M
3300012209\|Ga0137379_10354335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1377	Open in IMG/M
3300012354\|Ga0137366_10442993	Not Available	942	Open in IMG/M
3300012357\|Ga0137384_10440266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1073	Open in IMG/M
3300014491\|Ga0182014_10002995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	20710	Open in IMG/M
3300014491\|Ga0182014_10518208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300014492\|Ga0182013_10055730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2956	Open in IMG/M
3300017821\|Ga0187812_1004502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4821	Open in IMG/M
3300017821\|Ga0187812_1286056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300017822\|Ga0187802_10185069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	799	Open in IMG/M
3300017823\|Ga0187818_10157706	Not Available	988	Open in IMG/M
3300017924\|Ga0187820_1016290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1834	Open in IMG/M
3300017926\|Ga0187807_1072780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1071	Open in IMG/M
3300017926\|Ga0187807_1110330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	868	Open in IMG/M
3300017926\|Ga0187807_1133171	Not Available	790	Open in IMG/M
3300017926\|Ga0187807_1141833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	766	Open in IMG/M
3300017928\|Ga0187806_1030224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1602	Open in IMG/M
3300017932\|Ga0187814_10018076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2674	Open in IMG/M
3300017932\|Ga0187814_10022152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2388	Open in IMG/M
3300017942\|Ga0187808_10446591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
3300017943\|Ga0187819_10019166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3962	Open in IMG/M
3300017943\|Ga0187819_10078731	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1966	Open in IMG/M
3300017946\|Ga0187879_10129895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1433	Open in IMG/M
3300017961\|Ga0187778_10134374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1554	Open in IMG/M
3300017970\|Ga0187783_10985422	Not Available	607	Open in IMG/M
3300017972\|Ga0187781_10461685	Not Available	910	Open in IMG/M
3300017972\|Ga0187781_10884705	Not Available	650	Open in IMG/M
3300017972\|Ga0187781_11136864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300017975\|Ga0187782_11694041	Not Available	500	Open in IMG/M
3300018001\|Ga0187815_10196398	Not Available	854	Open in IMG/M
3300018012\|Ga0187810_10445998	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300018030\|Ga0187869_10150723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1153	Open in IMG/M
3300018037\|Ga0187883_10617458	Not Available	563	Open in IMG/M
3300018038\|Ga0187855_10888172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300018042\|Ga0187871_10097171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1701	Open in IMG/M
3300018044\|Ga0187890_10518745	Not Available	670	Open in IMG/M
3300018058\|Ga0187766_10028977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3204	Open in IMG/M
3300018062\|Ga0187784_10360144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1178	Open in IMG/M
3300018085\|Ga0187772_10028325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3308	Open in IMG/M
3300018085\|Ga0187772_10824467	Not Available	671	Open in IMG/M
3300018086\|Ga0187769_10012780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5407	Open in IMG/M
3300018088\|Ga0187771_10436102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1106	Open in IMG/M
3300019787\|Ga0182031_1040114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1893	Open in IMG/M
3300019787\|Ga0182031_1215302	Not Available	636	Open in IMG/M
3300024295\|Ga0224556_1083967	Not Available	781	Open in IMG/M
3300025509\|Ga0208848_1064497	Not Available	768	Open in IMG/M
3300025527\|Ga0208714_1019109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1688	Open in IMG/M
3300025604\|Ga0207930_1028155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1526	Open in IMG/M
3300027497\|Ga0208199_1000891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11265	Open in IMG/M
3300027497\|Ga0208199_1001122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9709	Open in IMG/M
3300027568\|Ga0208042_1032279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1349	Open in IMG/M
3300027570\|Ga0208043_1007052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3866	Open in IMG/M
3300027625\|Ga0208044_1080449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	978	Open in IMG/M
3300027625\|Ga0208044_1122779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	739	Open in IMG/M
3300027696\|Ga0208696_1125401	Not Available	842	Open in IMG/M
3300027812\|Ga0209656_10180017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1038	Open in IMG/M
3300027812\|Ga0209656_10366204	Not Available	652	Open in IMG/M
3300027898\|Ga0209067_10577490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300030494\|Ga0310037_10065116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1720	Open in IMG/M
3300030494\|Ga0310037_10139120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1107	Open in IMG/M
3300032160\|Ga0311301_10143883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4351	Open in IMG/M
3300032160\|Ga0311301_10232366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3081	Open in IMG/M
3300032160\|Ga0311301_10593889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1599	Open in IMG/M
3300032160\|Ga0311301_11153030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1000	Open in IMG/M
3300032160\|Ga0311301_11633656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	781	Open in IMG/M
3300032160\|Ga0311301_11874625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	708	Open in IMG/M
3300032160\|Ga0311301_12491123	Not Available	579	Open in IMG/M
3300032783\|Ga0335079_10010639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10475	Open in IMG/M
3300033158\|Ga0335077_10257425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1930	Open in IMG/M
3300033818\|Ga0334804_010020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3798	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.81%
Aquatic	Environmental → Aquatic	31.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.97%
Freshwater	Environmental → Aquatic → Freshwater	28.44%
Sediment	Environmental → Aquatic → Sediment	2.75%
Peat	Environmental → Terrestrial → Peat	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	28.44%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	15.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.01%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.83%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	40.37%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	15.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	11.01%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.50%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	4.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.75%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.83%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_1000308912	3300000567	Peatlands Soil	MSNQADPEAAVSQIRVPGADHSYAAAHDWISQTAAAGKTLCLPDEEKPAEGEDLAGAVVPMVPGEHPA*
JGI12270J11330_100071044	3300000567	Peatlands Soil	MSMQVSPEAAVWQIGMPGADRSYAAAHDWIQQTVAPGKRLSPPDEEKLADGEDPVGAVVLTVLGEHRA*
JGI12270J11330_101625332	3300000567	Peatlands Soil	MSKQAGPEAAVWQIWMPGADRRYAPAHDWIHQAVAAGKMLSLPDEEKPADGEDPAGVLVPISRSAHRA*
JGI12269J14319_1000485212	3300001356	Peatlands Soil	MSNQPGPEAAVSQIRVPGADHSYAAAHDWISQTAAAGKTLCLPDEEKPAEGEDLAGAVVPMVPGEHPA*
JGI12269J14319_100086256	3300001356	Peatlands Soil	MSMQVSPEAAVWQIGMPGADRGYAAAHDWIQQTVAPGKRLSPPDEEKLADGEDPVGAVVLTVLGEHRA*
JGI12269J14319_102463632	3300001356	Peatlands Soil	KTTKGIGIMSKQADPEAAVWQIWMPGSDRRYAAAHDWIHRTVAAGKTLSLPDEEKSADGEDPAGALVPIIPGEHRA*
JGI26339J46600_100825852	3300003218	Bog Forest Soil	MSKQADPEAAVSQIWMPGADRSCAAPHDWISQTAAAGKTLCLPDEEKPAEGEDLAGALVPMVPGEHPA*
JGI26341J46601_100085763	3300003219	Bog Forest Soil	MSKQAGPEAAVWQIWMPGSDRRHTAAHDWIHQTVAAGKRLSLPDEEKPAEGEDLADALAPMVPGEHPA*
JGI26340J50214_100994102	3300003368	Bog Forest Soil	MSKQAGPEAAVWQIWMPGSDRRHTAAHDWIHQTVAAGKRLSLPDEEKPAEGEDLADALAPMVPGEHPA
Ga0062386_1007473632	3300004152	Bog Forest Soil	VSKQVGPEAAVWQIWMPGADRRYAAAHHWIHQIVAAGKTLSLPAEETPADGEDLAGALGPMVPSEHRA*
Ga0075017_1013969662	3300006059	Watersheds	MSKQAGPEAAVSQIWMPGADRSYAAAHDWISQTAAAGKTPCLPDEEKPAEGEDLAGALVPMVPGEHPA*
Ga0075019_110907642	3300006086	Watersheds	MSKQAGPEAAVSQIWMPGADRSYAAAHDWISQTAAAGKTPCLPDEEKPAEGEDLAGALVPMVPSQHPA*
Ga0074055_101762002	3300006573	Soil	QIWMPGADRSYAAAHEGISQTAAAGKTLCLPDEEKPAEGEDLAGALAPMVPGGHPA*
Ga0074050_117661101	3300006577	Soil	MSKQGGPEAAVPQIWMRGADRSYAVAHEGISQTAAAGKTLCLPDEEKPAEGEDLAGALAPMVPGGHPA*
Ga0074057_109103562	3300006605	Soil	GARRCARQTTGGIKVMSKQGGPEAAVPQIWMRGADRSYAVAHEGISQTAAAGKTLCLPDEEKPAEGEDLAGALAPMVPGGHPA*
Ga0116214_11236611	3300009520	Peatlands Soil	MSKQAGPEAAVWQIWMPRSDRRYAAAHDWIRQTVAAGKTLSLPDEEKPADGEDPAGALVPIVPGEHQA*
Ga0116222_100117014	3300009521	Peatlands Soil	MQVSPEAAVWQIGMPGADRSYAAAHDWIQQTVAPGKRLSPPDEEKLADGEDPVGAVVLTVLGEHRA*
Ga0116222_10741822	3300009521	Peatlands Soil	MSKQADPDAAVWQIWMPGSDRRYAAAHDWIHRTVAAGKTLSLPDEEKSADGEDPAGALVPIIPGEHRA*
Ga0116218_14169732	3300009522	Peatlands Soil	MSKQAGPEAAVWQIWMPGADRSDAAAHDWISQTAAAGKTPCLPDEEKPAEGEEPAGAVVPMVPGEHPA*
Ga0116218_14987691	3300009522	Peatlands Soil	MSKQAGPEAAVWQIWMPGSDRRYAAAHDWIRQTVAAGKTLSLPDEEKPADGEDPAGAL
Ga0116221_12325891	3300009523	Peatlands Soil	MSKQAGPEAAVWQIWMPGADRRCAPAHDWIHQAVAAGKMLSLPDEEKPADGEDPAGVLVPISRSAHRA*
Ga0116225_10873722	3300009524	Peatlands Soil	MSKQADPEAAVWQIWMPGSDRRYAAAHDWIHRTVAAGKTLSLPDEEKSADGEDPAGALVPIIPGEHRA*
Ga0116220_100006193	3300009525	Peatlands Soil	MQVSPEAAVWQIGMPGADRGYAAAHDWIQQTVAPGKRLSPPDEEKLADGEDPVGAVVLTVLGEHRA*
Ga0116106_11275702	3300009645	Peatland	MARAAAHAKQSKGIKVMSKQAGPEAAVSQIWMPDADRSYAAAHDWISQTAAAGKTLCLPDEQKPAEGEDLAGALVPMVPSEHPA*
Ga0116224_105651222	3300009683	Peatlands Soil	KQAGPEAAVWQIWMPGADRRYAPGHDWIHQAVAAGKMLSLPDEEKPADGEDPAGVLVPISRSAHRA*
Ga0116216_102232502	3300009698	Peatlands Soil	MSKQAGPEAAISQIWMPGADHSYAAAHDRIRQTAAAGKTLCLPAEQKPAKGVDVAGALVPMVPGGHPA*
Ga0116216_105060082	3300009698	Peatlands Soil	MSKQAAPEAAVSQIWMPGADRSYAAAHDRIGQTAAAGKAPCLPAEEKPAEGEDLAGALVPMVPGEHPA*
Ga0116216_106053802	3300009698	Peatlands Soil	MSKQADPEAAVWQIWMPGSDRRYAAAHDWIRQTVAAGKTLSLPDEEKPADGEDPAGALVPIVPGEHQA*
Ga0116216_107152021	3300009698	Peatlands Soil	TIGGIKVMSKQAGPEAAVSQIWMPGADHSYAAAHDRISQTAAAGKTLCLPDEEKPAAGEDLADAVVPMVPAEHPA*
Ga0116134_100088711	3300009764	Peatland	MSEQAGPEAAVPQIWMLGADRSYAAAHDWISRTAAAGKTLWLPAEGKPAEGEDLAGALVPMVPGEHPA*
Ga0136449_1004709142	3300010379	Peatlands Soil	MSKQAGPEAAVWQIWMPGSDRRYAAAHDWIRQTVAAGKTLSLPDEEKPADGEDPAGALVPIVPGEHQA*
Ga0136449_1009447872	3300010379	Peatlands Soil	MSKQAGPEAAVWQIRVPGADHSYAAAHDWVGQTAAAGKALCLPDEEKPAEGGDLAGAVVPVVPGEHPA*
Ga0136449_1009504333	3300010379	Peatlands Soil	MSKQADPEAAVWQIWMPSADRSYAAAHDWISQTAAAGKTLCLPDEQKPAGGEDLAGALVPMVPSQHPA*
Ga0136449_1012055522	3300010379	Peatlands Soil	MVMSKQAGPEAAVSQIWMPGADRSYAAAHDWISQTAAAGKTLCLPDEEKPAEGEDLAGALVPMVPGEHPA*
Ga0136449_1014991372	3300010379	Peatlands Soil	MSKQAGPKAAVWQIWMSGADRSYAAAHDWVSQTAAAGKTLCRPDEENSAEGDDLAGVLVPMVPGEHPA*
Ga0136449_1017486232	3300010379	Peatlands Soil	MVSKQPGPEAAVWQIRRPGADRRSAAAHHWIHQVVAAGETLCPPAEETSADAGDPAGALMPMIPGEHRA*
Ga0136449_1025297761	3300010379	Peatlands Soil	MSKQAAPEAAVSQIWMPGADRSYAAAHDRIGQTAAAGKAPCLPDQEKPAEGEDLAGALVPMVPGEHPA*
Ga0136449_1032467202	3300010379	Peatlands Soil	MSKRAVPEAAVSQIRVPGADHSYAAAHDWISHTAAAGKAPCLPDEEKPAEGEDLAGAVVPMVPGEHPA*
Ga0136449_1043145411	3300010379	Peatlands Soil	PEAAVSQIRVPGADHSYAAAHDWISQTAAAGKTLCLPDEEMSAEGEDLAGAVVPMVPGEHPA*
Ga0137381_105313572	3300012207	Vadose Zone Soil	MSKQAGPEAAVSQIWMPGADRDYAAAHDWIRQTAATGKTLPLPDEEQPAEGRELADALVPMAPAST*
Ga0137379_103543352	3300012209	Vadose Zone Soil	MSKQGGPEAAVPQIWMPGADRSYAAAHDWISQTAAAGKTLCLPDEEKPAEGEDLAGPLVPMVPGEHPA*
Ga0137366_104429932	3300012354	Vadose Zone Soil	MSKQGGPEAAVPQIWMPGADRSYAAAHDWISQTAAAGKTLCLPDEEKPAEGEDPAGALVPMVPGEHPA*
Ga0137384_104402661	3300012357	Vadose Zone Soil	MSKQAGPEAAVWQIWMPGADRRYAAAHDWIHQIVAAGKTLSRPGEETPADGEDPAGALVPMVPSEHRT*
Ga0182014_1000299515	3300014491	Bog	MSKQAGPGAAVPRIWMLGADRSYAAAHDRIGRTAAAGKTPWLPAEGKPAKGRPAEGEDLAGALVPMVPGEHPA*
Ga0182014_105182082	3300014491	Bog	MSKQAGPEAAVWQIWMPGADRSYAAAHDWIHQTVAAGKTLSLPDEDKPADGEDLAGALVPMVSGEHRA*
Ga0182013_100557302	3300014492	Bog	MSKRAGPEAAVSQIRVPGADHSYAAAHDWISHTAAAGKAPSLPDEEKPAEGEDLAGAVVPMVPGEHPA*
Ga0187812_10045026	3300017821	Freshwater Sediment	MSKQADPEAAVSQIWMPGADRSYAAAHDWISQTAAAGKTLCLPDEEKPAEGEDLPGALVPMVPSEHPA
Ga0187812_12860561	3300017821	Freshwater Sediment	MSKQAGPEAAVWQTWTLGADRSYAAAHDWISQTAAAGKTLCLPDEEKPAEGEDLAGVLVPMVPSEHPA
Ga0187802_101850691	3300017822	Freshwater Sediment	MSKQVGPEAAVWQTWTLGADRSYAAAHDWISQTAAAGKTLCLPDEEKPAEGEDLPGALVPMVPSEHPA
Ga0187818_101577061	3300017823	Freshwater Sediment	MSKQAGPEAAVWQTWTLGADRSYAAAHDWISQTAAAGKTLCLPDEDKPAEGEDLAGALVPMVPSEHPA
Ga0187820_10162903	3300017924	Freshwater Sediment	MSNQAGPEAAVSQIRVPGADHSYAAAHDWISQTAAAGKTLCLPDEEKPAEGEDLPGALVPMVPSEHPA
Ga0187807_10727802	3300017926	Freshwater Sediment	MSKQAGPEAAVSQIWMPGADRSYAAAHDWISQTAAAGKTRCLPDEEKPAEGEDLAGALVPMVPSEHPA
Ga0187807_11103302	3300017926	Freshwater Sediment	MSNQAGPEAAVSQIRVPGADHSYAAAHDWISQTAAAGKTLCLPDEEKPAEGEDLAGAVVPMVPGEHPA
Ga0187807_11331712	3300017926	Freshwater Sediment	MSKQAGPEAAVWQTWTLGADRSYAAAHDWISQTAAAGKTLCLPDEDKPAEGEDLAGALMPMVPSEHPA
Ga0187807_11418332	3300017926	Freshwater Sediment	MSKQAGPEAAVSQIWMPGADRSYAAAHDWISQTAAAGKTLCLPDEEKPAEGEDLPGALVPMVPSEHPA
Ga0187806_10302242	3300017928	Freshwater Sediment	MSKQAGPEAAVWQTWTLGADRSYAAAHDWISQTAAAGKTLCLPDEEKPAEGEDLAGAVVPMVPGEHPA
Ga0187814_100180762	3300017932	Freshwater Sediment	MARRCARQTIGGISVMSKQADPEAAVSQIWMPGADRSYAAAHDWISQTAAAGKTLCLPDEEKPAEGEDLPGALVPMVPSEHPA
Ga0187814_100221522	3300017932	Freshwater Sediment	MSKQAGPEAAVWQTWTLGADRSYAAAHDWISQTAAAGKTLRLPDEDKPAEGEDLAGALVPMVPSEHPA
Ga0187808_104465911	3300017942	Freshwater Sediment	MSKQVGPEAAVWQTWTLGADRSYAAAHDWISQTAAAGKTLCLPDEDKPAEGEDLAGALMPMVPSEHPA
Ga0187819_100191664	3300017943	Freshwater Sediment	RRSEAAVSQIRVPGAEHSYAAAHDRISQAVAAGKAPCLPDEEKPAEGEDLAGAVVPMVPGEHPA
Ga0187819_100787311	3300017943	Freshwater Sediment	MSKQAGPQAAVSQIWMPGADRSYAAAHDWISQTAAAGKTLCLPDEEKPAAGEDLPGALVPMVPSEHPA
Ga0187879_101298952	3300017946	Peatland	MSKQAGPEAAVSQIWMPDADRSYAAAHDWISQTAAAGKTLCLPDEQKPAEGEDLAGALVPMVPSEHPA
Ga0187778_101343741	3300017961	Tropical Peatland	MSRQACAEAAVWQIWMPGTDRSYAAAHDRISQTAAAGKTLGLPDEEKSAEGEELAGALVPMVPSEHPA
Ga0187783_109854221	3300017970	Tropical Peatland	MSKQAGPEAVVWQIWMPGADRSYAAAHDRISQTAAAGKTLCRPDEEKPAEGEDLAGALVPVVPGEHPA
Ga0187781_104616852	3300017972	Tropical Peatland	MSKQAGPEAVVWQIWMPGADRSYAAAHDRISQTAAAGKTLRLPDEEKRAEGEDLAGTVVPMVPGEHPA
Ga0187781_108847052	3300017972	Tropical Peatland	MSKQAGPQAAVWQIWMPGADRSYAAAHDRISQAASAGKTLCRPDEEKPGEDLAGALVPMVPGEHPA
Ga0187781_111368641	3300017972	Tropical Peatland	VWMPGADRRYAAAHDRISQTAVAGKTLCRPDEEKPAEGEDLAGALVPMVPSQHPA
Ga0187782_116940411	3300017975	Tropical Peatland	MSKQAGPEAVVWQIWMPGADRSYAAAHDRISQTAAAGKTLGLPDEKKPAKGEELAGALVPMVPSEHPA
Ga0187815_101963981	3300018001	Freshwater Sediment	MSKQAGPEAAVWQTWTLGADRSYAAAHDWISQTAAAGKTLCLPDEDKPAEGEDLAGALMPMVPSE
Ga0187810_104459982	3300018012	Freshwater Sediment	MSKQAGPEAAVSQIWMPGADRSYAAAHDWISQTAAAGKTLRLPDEDKPAEGEDLAGALVPMVPSEHPA
Ga0187869_101507232	3300018030	Peatland	MSEQAGPEAAVPQIWMLGADRSYAAAHDWISRTAAAGKTLWLPAEGKPAEGEDLAGALVPMVPGEHPA
Ga0187883_106174581	3300018037	Peatland	MSKQAGPEAAVSQIWMPDADRSYAAAHDWISQTAAAGKTLCLPDEQKPAEGEDLAGALVPMVPGEHPA
Ga0187855_108881722	3300018038	Peatland	IKVMSKQAGPEAAVSQIWMPDADRSYAAAHDWISQTAAAGKTLCLPDEQKPAEGEDLAGALVPMVPSEHPA
Ga0187871_100971712	3300018042	Peatland	MSKRAGPEATVSQIRVPGADHSYAAAHDWISHTAAAGKAPCLPDEEKPAEGEDLAGAVGPMVPGEHPA
Ga0187890_105187451	3300018044	Peatland	MSKQAGPEAAVWQIWMPGADRSYAAAHDWIHQTVAAGKTLSLPDEDKPADGEDLAGALVPMVSGEHR
Ga0187766_100289773	3300018058	Tropical Peatland	MSKQAGSEAAVWQIWMPGTDRSYAAAYDRISQTAAAGKTLGLPDEEKPAEGEELAGALVPMVPSEHPA
Ga0187784_103601442	3300018062	Tropical Peatland	MSKQAGPEAAVWQVWMPGADRRYAAAHDRISQTAAAGKTLRLPDEEKRAEGEDLAGTVVPMVPGEHPA
Ga0187772_100283252	3300018085	Tropical Peatland	MSKQAGPEAAVWQIWMPGADRSYAAAHDRISQAAAAGKTLCRPDEEKPAEGEGLAGALVPMVPSGHPA
Ga0187772_108244671	3300018085	Tropical Peatland	MSKQAGPQAAVWQIWMPGADRSYAAAHDRISQTAAAGKTLCRPDEEKPAEGEDLPGALVPMVPGEHPA
Ga0187769_100127803	3300018086	Tropical Peatland	MSKQAGPEAAVWQIWMPGADRSHAAAHDRISQTAAAGKTLCRPDEDKPAEGQDPAGAPVPMVPSEHPA
Ga0187771_104361022	3300018088	Tropical Peatland	MSKQAGPEAAVWQIWMPGADRSHAAAHDWISQTAAAGKTLCRPDEDKPAEGQDPAGAPVPMVPSEHPA
Ga0182031_10401142	3300019787	Bog	MSKRAGPEAAVSQIRVPGADHSYAAAHDWISHTAAAGKAPSLPDEEKPAEGEDLAGAVVPMVPGEHPT
Ga0182031_12153021	3300019787	Bog	MARACARQAIGGIKVMSKRAGPEAAVSQIRVPGADHSYAAAHDWISHTAAAGKAPSLPDEEKPAEGEDLAGAVVPMVPGEHPT
Ga0224556_10839671	3300024295	Soil	MARACARQAIGGIKVMSKRAGPEAAVSQIRVPGADHSYAAAHDWISHTAAAGKAPSLPDEEKPAEGEDLAGAVVPMVPGEHPA
Ga0208848_10644971	3300025509	Arctic Peat Soil	MSKQAGPEAAVWQIWMPGADRRYAAVHDWIHQTVAAGKTLSLPDEETPADGGDPAGALAPMVPSEHRA
Ga0208714_10191094	3300025527	Arctic Peat Soil	AIAHTKIIKGIKIMSKQAGPQAAVWQIWMPGADRRYAAAHLWIHRIVAAGKTLCLPDEETPADGEDPAGALVPMVSGEHRA
Ga0207930_10281552	3300025604	Arctic Peat Soil	MSKQPGPEAAVWQIWMPGADRSYAAAHDWIHQTVAAGKALSLPDEDKPAAGEDLAGALVPMVSGEHRA
Ga0208199_100089112	3300027497	Peatlands Soil	MSNQADPEAAVSQIRVPGADHSYAAAHDWISQTAAAGKTLCLPDEEKPAEGEDLAGAVVPMVPGEHPA
Ga0208199_10011228	3300027497	Peatlands Soil	MSMQVSPEAAVWQIGMPGADRSYAAAHDWIQQTVAPGKRLSPPDEEKLADGEDPVGAVVLTVLGEHRA
Ga0208042_10322792	3300027568	Peatlands Soil	KVMSNQPGPEAAVSQIRVPGADHSYAAAHDWISQTAAAGKTLCLPDEEKPAEGEDLAGAVVPMVPGEHPA
Ga0208043_10070526	3300027570	Peatlands Soil	MSNQPGPEAAVSQIRVPGADHSYAAAHDWISQTAAAGKTLCLPDEEKPAEGEDLAGAVVPMVPGEHPA
Ga0208044_10804492	3300027625	Peatlands Soil	MSKQAGPEAAVWQIWMPGADRRYAPAHDWIHQAVAAGKMLSLPDEEKPADGEDPAGVLVPISRSAHRA
Ga0208044_11227791	3300027625	Peatlands Soil	MSKQADPEAAVWQIWMPGSDRRYAAAHDWIHRTVAAGKTLSLPDEEKSADGEDPAGALVPIIPGEHRA
Ga0208696_11254011	3300027696	Peatlands Soil	MSKQADPEAAVWQIWMPGSDRRYAAAHDWIHQAVAAGKMLSLPDEEKPADGEDPAGVLVPISRSAH
Ga0209656_101800172	3300027812	Bog Forest Soil	MSKQADPEAAVSQIWMPGADRSCAAPHDWISQTAAAGKTLCLPDEEKPAEGEDLAGALVPMVPGEHPA
Ga0209656_103662041	3300027812	Bog Forest Soil	VSKQVGPEAAVWQIWMPGADRRYAAAHHWIHQIVAAGKTLSLPAEETPADGEDLAGALGPMVPSEHRA
Ga0209067_105774902	3300027898	Watersheds	MSKQAGPEAAVSQIWMPGADRSYAAAHDWISQTAAAGKTPCLPDEEKPAEGEDLAGALMPMVPGEHPA
Ga0310037_100651162	3300030494	Peatlands Soil	MSKQAAPEAAVSQIWMPGADRSYAAAHDRIGQTAAAGKAPCLPDQEKPAEGEDLAGALVPMVPGEHPA
Ga0310037_101391202	3300030494	Peatlands Soil	MSKQAGPEAAISQIWMPGADHSYAAAHDRIRQTAAAGKTLCLPAEQKPAKGVDVAGALVPMVPGGHPA
Ga0311301_101438833	3300032160	Peatlands Soil	MSKQAGPEAAVWQIWMPGSDRRYAAAHDWIRQTVAAGKTLSLPDEEKPADGEDPAGALVPIVPGEHQA
Ga0311301_102323665	3300032160	Peatlands Soil	IKVMSKRAGPEAAVWQIRVPGADHSYAAAHDWVGQTAAAGKALCLPDEEKPAEGGDLAGAVVPVVPGEHPA
Ga0311301_105938892	3300032160	Peatlands Soil	MSKQAGPQAAVSQIWMPGADRSYAAAQDWISQAAAAGKTLCLPAEEKPAEGQDLAGALAPMVPGEHPA
Ga0311301_111530302	3300032160	Peatlands Soil	MSKQAGPKAAVWQIWMSGADRSYAAAHDWVSQTAAAGKTLCRPDEENSAEGDDLAGVLVPMVPGEHPA
Ga0311301_116336561	3300032160	Peatlands Soil	MSKQAGPEAAVWQIWMPGADRSDAAAHDWISQTAAAGKTPCLPDEEKPAEGEEPAGAVVPMVPGEHPA
Ga0311301_118746252	3300032160	Peatlands Soil	MSKRAVPEAAVSQIRVPGADHSYAAAHDWISHTAAAGKAPCLPDEEKPAEGEDLAGAVVPMVPGEHPA
Ga0311301_124911231	3300032160	Peatlands Soil	MSKQAGPEAAVWQIWMPGADRSYAAAHDWIRQTVAAGKTLCLPDEEKPADGEDPAGALVLIVPGEHRA
Ga0335079_100106398	3300032783	Soil	MSKQPGPAAAVLRIWLSRADRNYAAAHGWVKQTGATGKMLSLPDEDRPAAGEEVAGAPLPMAPASA
Ga0335077_102574253	3300033158	Soil	MSELAGPNAAVPQIWMPGADHNCAAAHNWIKQAAAARKTPSAQTREKPAEGEALAGAGADDPSEHMT
Ga0334804_010020_2637_2843	3300033818	Soil	MSKRAGPEAAVSQIRVPGADHSYAAAHDWISHTAAAGKAPSLPDEEKPAEGEDLAGAVVPMVPGEHPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088863

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences