Basic Information | |
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Family ID | F088954 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 109 |
Average Sequence Length | 103 residues |
Representative Sequence | AVKKAQAFALKHIAPMTDPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF |
Number of Associated Samples | 98 |
Number of Associated Scaffolds | 109 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 1.04 % |
% of genes near scaffold ends (potentially truncated) | 82.57 % |
% of genes from short scaffolds (< 2000 bps) | 78.90 % |
Associated GOLD sequencing projects | 88 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.51 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (84.404 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (17.431 % of family members) |
Environment Ontology (ENVO) | Unclassified (34.862 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (36.697 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 40.32% β-sheet: 0.00% Coil/Unstructured: 59.68% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.51 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 109 Family Scaffolds |
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PF00884 | Sulfatase | 29.36 |
PF07589 | PEP-CTERM | 2.75 |
PF13088 | BNR_2 | 1.83 |
PF13366 | PDDEXK_3 | 1.83 |
PF14885 | GHL15 | 1.83 |
PF12831 | FAD_oxidored | 0.92 |
PF03712 | Cu2_monoox_C | 0.92 |
PF13676 | TIR_2 | 0.92 |
PF01609 | DDE_Tnp_1 | 0.92 |
PF16385 | DUF4994 | 0.92 |
PF06283 | ThuA | 0.92 |
PF13358 | DDE_3 | 0.92 |
PF07859 | Abhydrolase_3 | 0.92 |
PF07394 | DUF1501 | 0.92 |
COG ID | Name | Functional Category | % Frequency in 109 Family Scaffolds |
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COG0657 | Acetyl esterase/lipase | Lipid transport and metabolism [I] | 0.92 |
COG3039 | Transposase and inactivated derivatives, IS5 family | Mobilome: prophages, transposons [X] | 0.92 |
COG3293 | Transposase | Mobilome: prophages, transposons [X] | 0.92 |
COG3385 | IS4 transposase InsG | Mobilome: prophages, transposons [X] | 0.92 |
COG4813 | Trehalose utilization protein | Carbohydrate transport and metabolism [G] | 0.92 |
COG5421 | Transposase | Mobilome: prophages, transposons [X] | 0.92 |
COG5433 | Predicted transposase YbfD/YdcC associated with H repeats | Mobilome: prophages, transposons [X] | 0.92 |
COG5659 | SRSO17 transposase | Mobilome: prophages, transposons [X] | 0.92 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 85.32 % |
Unclassified | root | N/A | 14.68 % |
Visualization |
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Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
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3300003388|JGI25910J50241_10019582 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 2382 | Open in IMG/M |
3300003404|JGI25920J50251_10012180 | All Organisms → cellular organisms → Bacteria | 2893 | Open in IMG/M |
3300004157|Ga0062590_102383070 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 558 | Open in IMG/M |
3300004479|Ga0062595_102705927 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 500 | Open in IMG/M |
3300004769|Ga0007748_11163641 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium | 607 | Open in IMG/M |
3300004789|Ga0007752_10986646 | All Organisms → cellular organisms → Bacteria | 1068 | Open in IMG/M |
3300005263|Ga0071346_1082380 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola → Anatilimnocola aggregata | 1200 | Open in IMG/M |
3300005294|Ga0065705_10831024 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 560 | Open in IMG/M |
3300005329|Ga0070683_101511537 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 645 | Open in IMG/M |
3300005543|Ga0070672_102118583 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 507 | Open in IMG/M |
3300005615|Ga0070702_101536898 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 549 | Open in IMG/M |
3300005616|Ga0068852_102686669 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 517 | Open in IMG/M |
3300005842|Ga0068858_102315483 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 531 | Open in IMG/M |
3300006047|Ga0075024_100444580 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 668 | Open in IMG/M |
3300006051|Ga0075364_11088247 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 543 | Open in IMG/M |
3300006109|Ga0007870_1009021 | All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon | 2112 | Open in IMG/M |
3300006113|Ga0007858_1008351 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 2568 | Open in IMG/M |
3300006358|Ga0068871_102300832 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 514 | Open in IMG/M |
3300007559|Ga0102828_1095648 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 720 | Open in IMG/M |
3300007621|Ga0102872_1083975 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 859 | Open in IMG/M |
3300007639|Ga0102865_1178899 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 633 | Open in IMG/M |
3300008996|Ga0102831_1273465 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 558 | Open in IMG/M |
3300009093|Ga0105240_11816197 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 635 | Open in IMG/M |
3300009152|Ga0114980_10057347 | All Organisms → cellular organisms → Bacteria | 2353 | Open in IMG/M |
3300009152|Ga0114980_10809095 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 521 | Open in IMG/M |
3300009155|Ga0114968_10483933 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 666 | Open in IMG/M |
3300009160|Ga0114981_10051080 | All Organisms → cellular organisms → Bacteria | 2319 | Open in IMG/M |
3300009160|Ga0114981_10268953 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 927 | Open in IMG/M |
3300009160|Ga0114981_10783441 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 503 | Open in IMG/M |
3300009163|Ga0114970_10012101 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia | 6009 | Open in IMG/M |
3300009176|Ga0105242_12967621 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 525 | Open in IMG/M |
3300009184|Ga0114976_10046670 | All Organisms → cellular organisms → Bacteria | 2568 | Open in IMG/M |
3300009184|Ga0114976_10150625 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 1303 | Open in IMG/M |
3300009185|Ga0114971_10140938 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 1455 | Open in IMG/M |
3300009187|Ga0114972_10164900 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 1395 | Open in IMG/M |
3300010357|Ga0116249_11146275 | Not Available | 699 | Open in IMG/M |
3300010885|Ga0133913_12019992 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes | 1431 | Open in IMG/M |
3300011432|Ga0137428_1046595 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 1139 | Open in IMG/M |
3300011432|Ga0137428_1152752 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 680 | Open in IMG/M |
3300011445|Ga0137427_10082383 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 1288 | Open in IMG/M |
3300012039|Ga0137421_1035818 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 1299 | Open in IMG/M |
3300012893|Ga0157284_10228045 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 576 | Open in IMG/M |
3300012905|Ga0157296_10319482 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 551 | Open in IMG/M |
3300012908|Ga0157286_10083283 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 903 | Open in IMG/M |
3300012912|Ga0157306_10435473 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 522 | Open in IMG/M |
3300012931|Ga0153915_13509239 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 507 | Open in IMG/M |
3300012958|Ga0164299_10688309 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 713 | Open in IMG/M |
3300012985|Ga0164308_11311008 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 658 | Open in IMG/M |
3300013088|Ga0163200_1228341 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 581 | Open in IMG/M |
3300013296|Ga0157374_10817631 | All Organisms → cellular organisms → Bacteria | 948 | Open in IMG/M |
3300013306|Ga0163162_12410793 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 605 | Open in IMG/M |
3300013308|Ga0157375_12984529 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 565 | Open in IMG/M |
3300014325|Ga0163163_10885881 | Not Available | 956 | Open in IMG/M |
3300014502|Ga0182021_10490884 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 1464 | Open in IMG/M |
3300014502|Ga0182021_12069219 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 685 | Open in IMG/M |
3300015200|Ga0173480_10977034 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 556 | Open in IMG/M |
3300015371|Ga0132258_12143352 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 1404 | Open in IMG/M |
3300015373|Ga0132257_102361116 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 690 | Open in IMG/M |
3300015374|Ga0132255_106249532 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 504 | Open in IMG/M |
3300019356|Ga0173481_10353267 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 703 | Open in IMG/M |
3300020221|Ga0194127_10939439 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 523 | Open in IMG/M |
3300025366|Ga0208505_1005455 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 1964 | Open in IMG/M |
3300025390|Ga0208743_1013616 | Not Available | 1275 | Open in IMG/M |
3300025900|Ga0207710_10601129 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 575 | Open in IMG/M |
3300026023|Ga0207677_11589159 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 605 | Open in IMG/M |
3300027084|Ga0208443_1088722 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 599 | Open in IMG/M |
3300027193|Ga0208800_1059059 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 522 | Open in IMG/M |
3300027224|Ga0208164_1091689 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 512 | Open in IMG/M |
3300027733|Ga0209297_1261599 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 659 | Open in IMG/M |
3300027734|Ga0209087_1118669 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium | 1098 | Open in IMG/M |
3300027760|Ga0209598_10104038 | All Organisms → cellular organisms → Bacteria | 1329 | Open in IMG/M |
3300027892|Ga0209550_10758933 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 549 | Open in IMG/M |
3300027974|Ga0209299_1010671 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseimicrobium | 4406 | Open in IMG/M |
3300027974|Ga0209299_1143512 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 905 | Open in IMG/M |
(restricted) 3300028044|Ga0247838_1255573 | All Organisms → cellular organisms → Bacteria | 593 | Open in IMG/M |
3300028381|Ga0268264_12460180 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 526 | Open in IMG/M |
(restricted) 3300028569|Ga0247843_1011952 | All Organisms → cellular organisms → Bacteria | 8750 | Open in IMG/M |
(restricted) 3300028569|Ga0247843_1247326 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 646 | Open in IMG/M |
3300031786|Ga0315908_11261816 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 584 | Open in IMG/M |
3300031857|Ga0315909_10431630 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia | 933 | Open in IMG/M |
3300031873|Ga0315297_10677858 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 864 | Open in IMG/M |
3300031902|Ga0302322_102911170 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 590 | Open in IMG/M |
3300031997|Ga0315278_11814855 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 576 | Open in IMG/M |
3300032002|Ga0307416_103882218 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 501 | Open in IMG/M |
3300032143|Ga0315292_10956718 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 713 | Open in IMG/M |
3300032164|Ga0315283_11640985 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 653 | Open in IMG/M |
3300032397|Ga0315287_11105333 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 918 | Open in IMG/M |
3300032421|Ga0310812_10546077 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 520 | Open in IMG/M |
3300032579|Ga0316228_1255397 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 553 | Open in IMG/M |
3300033414|Ga0316619_11914942 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 539 | Open in IMG/M |
3300033521|Ga0316616_101893217 | All Organisms → cellular organisms → Bacteria | 787 | Open in IMG/M |
3300034051|Ga0335024_0532230 | All Organisms → cellular organisms → Bacteria → PVC group | 569 | Open in IMG/M |
3300034114|Ga0364938_087246 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 590 | Open in IMG/M |
3300034148|Ga0364927_0080848 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 885 | Open in IMG/M |
3300034149|Ga0364929_0360278 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 505 | Open in IMG/M |
3300034151|Ga0364935_0159334 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → unclassified Chthoniobacter → Chthoniobacter sp. 12-60-6 | 716 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 17.43% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 9.17% |
Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 8.26% |
Freshwater Lake | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake | 6.42% |
Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 5.50% |
Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 4.59% |
Freshwater | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater | 3.67% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 3.67% |
Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 3.67% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.75% |
Freshwater | Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater | 1.83% |
Freshwater | Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater | 1.83% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.83% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 1.83% |
Fen | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen | 1.83% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 1.83% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.83% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.83% |
Wetland | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland | 0.92% |
Anaerobic Enrichment Culture | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Anaerobic Enrichment Culture | 0.92% |
Freshwater Lentic | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic | 0.92% |
Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 0.92% |
Freshwater Wetlands | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands | 0.92% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 0.92% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.92% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.92% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.92% |
Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 0.92% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.92% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.92% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.92% |
Populus Endosphere | Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere | 0.92% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.92% |
Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.92% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.92% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.92% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.92% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.92% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.92% |
Anaerobic Digestor Sludge | Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge | 0.92% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300003388 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN | Environmental | Open in IMG/M |
3300003404 | Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD | Environmental | Open in IMG/M |
3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300004769 | Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300004789 | Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SD (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300005263 | Freshwater pond sediment microbial communities from Middleton WI, enriched with Humic Acid Only under anaerobic conditions - HA Sample 3 | Environmental | Open in IMG/M |
3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
3300005517 | Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4) | Environmental | Open in IMG/M |
3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
3300006047 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 | Environmental | Open in IMG/M |
3300006051 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Host-Associated | Open in IMG/M |
3300006109 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH04Jul08 | Environmental | Open in IMG/M |
3300006113 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Aug08 | Environmental | Open in IMG/M |
3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
3300007004 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost | Environmental | Open in IMG/M |
3300007559 | Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 | Environmental | Open in IMG/M |
3300007590 | Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02 | Environmental | Open in IMG/M |
3300007621 | Estuarine microbial communities from the Columbia River estuary - metaG 1547A-3 | Environmental | Open in IMG/M |
3300007639 | Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02 | Environmental | Open in IMG/M |
3300008996 | Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747 | Environmental | Open in IMG/M |
3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
3300009131 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 | Environmental | Open in IMG/M |
3300009152 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG | Environmental | Open in IMG/M |
3300009155 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG | Environmental | Open in IMG/M |
3300009160 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG | Environmental | Open in IMG/M |
3300009163 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG | Environmental | Open in IMG/M |
3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
3300009184 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG | Environmental | Open in IMG/M |
3300009185 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG | Environmental | Open in IMG/M |
3300009187 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG | Environmental | Open in IMG/M |
3300010357 | AD_USSTca | Engineered | Open in IMG/M |
3300010885 | northern Canada Lakes Co-assembly | Environmental | Open in IMG/M |
3300011432 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2 | Environmental | Open in IMG/M |
3300011445 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2 | Environmental | Open in IMG/M |
3300012039 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2 | Environmental | Open in IMG/M |
3300012892 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 | Environmental | Open in IMG/M |
3300012893 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1 | Environmental | Open in IMG/M |
3300012905 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2 | Environmental | Open in IMG/M |
3300012908 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1 | Environmental | Open in IMG/M |
3300012912 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2 | Environmental | Open in IMG/M |
3300012931 | Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG | Environmental | Open in IMG/M |
3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
3300013088 | Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_200m | Environmental | Open in IMG/M |
3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
3300014502 | Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly) | Environmental | Open in IMG/M |
3300015200 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2) | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300019356 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2) | Environmental | Open in IMG/M |
3300020221 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015036 Kigoma Deep Cast 100m | Environmental | Open in IMG/M |
3300025366 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jul08 (SPAdes) | Environmental | Open in IMG/M |
3300025390 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH04Jul08 (SPAdes) | Environmental | Open in IMG/M |
3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300027084 | Estuarine microbial communities from the Columbia River estuary - metaG 1554A-02 (SPAdes) | Environmental | Open in IMG/M |
3300027193 | Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes) | Environmental | Open in IMG/M |
3300027224 | Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02 (SPAdes) | Environmental | Open in IMG/M |
3300027621 | Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes) | Environmental | Open in IMG/M |
3300027733 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027734 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027736 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027756 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes) | Environmental | Open in IMG/M |
3300027760 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027892 | Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes) | Environmental | Open in IMG/M |
3300027974 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300028044 (restricted) | Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_15m | Environmental | Open in IMG/M |
3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028569 (restricted) | Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2017_8m | Environmental | Open in IMG/M |
3300031786 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124 | Environmental | Open in IMG/M |
3300031857 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125 | Environmental | Open in IMG/M |
3300031873 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0 | Environmental | Open in IMG/M |
3300031902 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2 | Environmental | Open in IMG/M |
3300031997 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0 | Environmental | Open in IMG/M |
3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Host-Associated | Open in IMG/M |
3300032143 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0 | Environmental | Open in IMG/M |
3300032164 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0 | Environmental | Open in IMG/M |
3300032397 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0 | Environmental | Open in IMG/M |
3300032421 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3 | Environmental | Open in IMG/M |
3300032579 | Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18021 | Environmental | Open in IMG/M |
3300032668 | Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025 | Environmental | Open in IMG/M |
3300033414 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B | Environmental | Open in IMG/M |
3300033521 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B | Environmental | Open in IMG/M |
3300034051 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13May2013-rr0097 | Environmental | Open in IMG/M |
3300034114 | Sediment microbial communities from East River floodplain, Colorado, United States - 9_s17 | Environmental | Open in IMG/M |
3300034148 | Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17 | Environmental | Open in IMG/M |
3300034149 | Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17 | Environmental | Open in IMG/M |
3300034151 | Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI25910J50241_100195823 | 3300003388 | Freshwater Lake | AVKKAQAFALKHIAPMTDPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF* |
JGI25920J50251_100121801 | 3300003404 | Freshwater Lake | AVKKAQAFALKHIAPMTDPNTGTSTSEHATRGTPTHYAIKEDLKRSFXLGLVLIGGGHTDEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0062590_1023830702 | 3300004157 | Soil | KELMDLQKFNPTYREEKLNNALQRAQAFAFTCISPMTDPNSGPPCKEYATRGTPSHYELKKDFKRGFQLGRILIGGQHTDEGIKIMNATLDHFPVGNAGQDGAHAAGPSALILSGLSSGVAGR* |
Ga0062595_1027059271 | 3300004479 | Soil | REEKLNAAVQKAQAFAFKCIAPMTDPNSGPPCADHATRGTPSHYALKQDSKRGFQLGLILIGGRHTDEGIKIMNASLEHFPIGNAGQDGVHAAEPSALILSGF* |
Ga0007748_111636412 | 3300004769 | Freshwater Lake | TSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0007752_109866462 | 3300004789 | Freshwater Lake | DPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0071346_10823804 | 3300005263 | Anaerobic Enrichment Culture | MDLQKFNPAYREEKLNAAVRKARAFALKCIAPMTDPNTGPPCTQHATRGTPSRYSLKDNLKRSYQLGLILFGGGHMDEGIKIMNAALDHFPIGNAGMDGVHAAEPSALILSGF* |
Ga0065705_108310241 | 3300005294 | Switchgrass Rhizosphere | DKDVLGYFMLTTKELMDLQKFNPAYREEKLNAAVQRAQAFAFKCIAPMTDPNSGPPCMEHATRGTPSHYALKENSKRGFQLGLILMGGGHTDEGIKIMNAALDHFPIGNAGQDGAHAAEPSALVLSGF* |
Ga0070683_1015115372 | 3300005329 | Corn Rhizosphere | SAVQRAQAFAFKCIAPMTDPSSGPPCMEHATRGTPFHYALKEDSKRGFQLGLILIGSRHRDEGIKIMNASLDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0070374_100224505 | 3300005517 | Freshwater Lake | FALQQIAPMTEPNTGPAPRPHATPGTPRRYSVQDEAKRSYQLGLILLEGGQQNEGLKIMSAALAQFPVGNAGQDGSHAAEPSALILSSPLLR* |
Ga0070672_1021185831 | 3300005543 | Miscanthus Rhizosphere | VLGYFMLTTKELMDLQKFNPAYREEKLNAAVQKAQAFAFKCIAPMTDPNSGPPCKEYATRGTPSHYSLIEDSKRGFQLGLILIGGRHTDEGIKIMNASLDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0070695_1015060991 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | SHYALKEDSKRGFQLGLILMGSGYTEEGIKIMNAALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0070702_1015368981 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | DPNSGPPCKEYATRGTPSHYSLKEDSKRGFQLGLILIGGRHTDEGIKIMNASLDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0068852_1026866692 | 3300005616 | Corn Rhizosphere | RGTPSHYSLQEDSKRGFQLGLILIGGRHTDEGIKIMNASLDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0068858_1023154832 | 3300005842 | Switchgrass Rhizosphere | QRAQAFAFKCIAPMTDPNSGPPCKEYATRGTPSHYSLKEDSKRGFQLGLILIGGRHTDEGIKIMNAALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0075024_1004445801 | 3300006047 | Watersheds | QKFNPAYREEKLNAAVQKAQAFALKCIAPMTEPNTGPACREHATRETPSHYSLKEDLKRSFQLGLVLMGGGHTDEGIKIMNAALDHFPIGNVGMDGAHAAEPSALILSGL* |
Ga0075364_110882471 | 3300006051 | Populus Endosphere | EHATRGTPSHYSLKEDSKRGFQLGLILIGGGHTDEGIKIMNAALDHFPIGNAGQDGAHAAEPSALVLSGF* |
Ga0007870_10090211 | 3300006109 | Freshwater | AQAFAFQCIAPMTEPNSGSACPEHTTRETPSHYSLRENAKRSFQLGHILIAGGYLAEGIKIMEAALAYFPIGNTGQDGAHAAEPTVLILSGN* |
Ga0007858_10083511 | 3300006113 | Freshwater | NPAYRDVKLSATIKKAQAFAFQCIAPMTEPNSGSACPEHTTRETPSHYSLRENAKRSFQLGHILIAGGYLAEGIKIMEAALAYFPIGNTGQDGAHAAEPTVLILSGN* |
Ga0068871_1023008322 | 3300006358 | Miscanthus Rhizosphere | FNPAYREEKLNAALQKAQALALKCIAPMTEPNTGPACAEHRTPSTPTHYAVADDLKRSFQLGLVLMGGGHTDEAVKILNAAVDHFPVGNAGMDGVHAAQPLALILSDSGSRTH* |
Ga0079218_112167721 | 3300007004 | Agricultural Soil | AQAFAVKFIAPTTEPNTGSVARPHATQGTPAHYAVKDDPKRSYQLGLVLFGGGYQEEGIKIVNAALPHFPFGNAGQDGAHAAEPVALILSH* |
Ga0102828_10956481 | 3300007559 | Estuarine | VLGYFMLTTKELMDLQKFNPTFREEKLTAAVKKAQAFALKHIAPMTDPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0102917_13098521 | 3300007590 | Estuarine | PAYHEDRLNAALKKAQTFALQQIAPTTEPNTGSGPRPHATAGTPKRYSVQDEAKRSYQLGLILLEGGQQKEGLRIMSAALAQFPVGNAGQDGSHAAEPSALILSSPLLR* |
Ga0102872_10839752 | 3300007621 | Estuarine | KDKDVLGYFMLTTKELMDLQKFNPAYREEKLNTAVKKAQAFALKHIAPMTDPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0102865_11788991 | 3300007639 | Estuarine | GYFMLTTKELMDLQTFNPTFREEKLTAAVKKAQAFALKHIAPMTDPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0102831_12734651 | 3300008996 | Estuarine | KDVLGYFMLTTKELMDLQKFNPAYREEKLNTAVKKAQAFALKHIAPMTDPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0105240_118161972 | 3300009093 | Corn Rhizosphere | LGYFMLTTTELMDLQKFNPAYREEKLNAAVRKAQAFALKHIAPMTDPDSGPPCSNHATRGTPSHYSLKDDSKRGFQLGLILIGGGHTGEGIKIMTAALDQFPIGNAGQDGAHAAEPSVLILSEF* |
Ga0115027_115649142 | 3300009131 | Wetland | MILQKFNPAYREEKLTAALQKAQAFALKHIAPMTDPNPGTSTSEHATRGTPKHYVIKEDLKRSFQLGLVLIGGGHTDEGVKIMTTALDHFPIGNAGQDGA |
Ga0114980_100573473 | 3300009152 | Freshwater Lake | KDKDVLGYFMLTTKELMDLQKFNPAYREEKLTAAVKKAQAFALKHIAPMTDPNTGTSTSEHATRCTPMHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMNTALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0114980_108090951 | 3300009152 | Freshwater Lake | TKELMDLQKLNPAYREEKLTAALKKAQAFALKHIAPMTDPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGVKIMTAALDQFPIGNAGQDGAHAAEPSALILSGF* |
Ga0114968_104839332 | 3300009155 | Freshwater Lake | LDKDPKDKDVLGYFMLTTKELMDLQKLNPTYREEKLTAAVRKAQAFALKHIAPMTEPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMNSALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0114981_100510801 | 3300009160 | Freshwater Lake | YFMLTTKELMDLQKLNPTYREEKLTAAVRKAQAFALKHIAPMTEPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0114981_102689531 | 3300009160 | Freshwater Lake | DPKDKDVLGYFMLTTKELMDLQKFNPAYREEKLTAAVKKAQAFALKHIAPMTDPNTGTSTFEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTEEGIKIMTTALDHFPIGNVGQDGAHAAEPSTLILSGF* |
Ga0114981_107834411 | 3300009160 | Freshwater Lake | LQKLNPAYREEKLTAALKKAQAFALKHIAPMTDPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGVKIMTAALDQFPIGNAGQDGAHAAEPSALILSGF* |
Ga0114970_100121015 | 3300009163 | Freshwater Lake | VLGYFMLTTKELMDLQKFNPVYREEKLTAAVKKAQAFALKHIAPMTDPNTGTSTSEHATRGTPSHYAIKEDLKRSFQLGLVLIGGGHTEEGIKIMNTALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0105242_129676211 | 3300009176 | Miscanthus Rhizosphere | KLNAALQKAQAFALKCIAPMTDPNTGGPCTEHATSGTPSHYSLQEDSKRSFQLGPILIGGGHRAEGIKIMNAALDHFPVGNAGQDGAHAAEPSALILSWL* |
Ga0114976_100466701 | 3300009184 | Freshwater Lake | EHATRGTPTHYAIKEDLKRSFQLGRVLIGGGHTDEGIKIMTAALDHFPIGNAGQDGAHAAEPSVLILSGF* |
Ga0114976_101506252 | 3300009184 | Freshwater Lake | PKDKDVLGYFMLTTKELMDLQKFNPAYREEKLTAAVKKAQAFALKHIAPMTDPNTGTSTFEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTEEGIKIMTTALDHFPIGNVGQDGAHAAEPSTLILSGF* |
Ga0114971_101241762 | 3300009185 | Freshwater Lake | PTHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0114971_101409381 | 3300009185 | Freshwater Lake | FALKHIAPMTDPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTEEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0114972_101649001 | 3300009187 | Freshwater Lake | EKLTAAVKKAQAFALKHIAPMTDPNTGTSSSEHTTRGTPTHYGIKEGLKRSFQLGLVLIGGGHTDEGIKIMTAALDHFPIGNAGQDGTHAAEPSVLILSGF* |
Ga0116249_111462752 | 3300010357 | Anaerobic Digestor Sludge | AQTFALKSIAPMTPPNEGTASTEHRTLGTPPRYTLKDDLKRSFQLGHVLMGSGHRDEAIKILNAALAEFPIGDAGMDGIHAAAPSALILSGF* |
Ga0133913_120199921 | 3300010885 | Freshwater Lake | KHIAPMTDPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTEEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0137428_10465952 | 3300011432 | Soil | LQKFNPAYREEKLNAAVQRAQAFALKCIAPMTDPNSGPPCAEHATRRTPSHYALKEDSKRGFQLGLILIGGGNMDEGIKIMNATLDHFPIGNADQDGAHAAEPSALILSSY* |
Ga0137428_11527522 | 3300011432 | Soil | MDKDVLGYFMLTTKELMDLQRFNPMYREEKLNAAVQKAQAFALKRIAPMTDPNSGPPCAEHSTRGTPSHYILKEDSKRGFQLGLILIGGGHLDEGIKIMNATLNHFPIGNAGQDGAHAAEPSALVLSGF* |
Ga0137427_100823832 | 3300011445 | Soil | PNSGPPCAEHSTRGTPSHYILKEDSKRGFQLGLILIGGGHLDEGIKIMNATLNHFPIGNAGQDGAHAAEPSALVLSGF* |
Ga0137421_10358182 | 3300012039 | Soil | LGYFMLTTKELMDLQRFNPMYREEKLNAAVQKAQAFALKRIAPMTDPNTGPPCAEHATRGTPSHYSLKEDSKRGFQLGLILIGGGHRDEGIKIMNATLYQFPIGNTGQDGAHAAEPSALILSGL* |
Ga0157294_102420851 | 3300012892 | Soil | PSHYALKDDSKRGFQLSLILIGGRHTDEGIKIMNATLDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0157284_102280451 | 3300012893 | Soil | QKAQAFALKHIAPMTDPNSGPPCLEHATRGTPSHYALKEDSKRGFQLGLILMGGGHGDEGIKIMNAALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0157296_103194821 | 3300012905 | Soil | KDPKDKDVLGYFMLTTKELMNLQKFNPAYREEKLNAALQKAQGFALKCIAPMTDPNTGAPCAEHATRGTPSHYSLKEDSKRSFQLGLILIGGGHRDEGIKIMNAALDHFPVGNAGQDGAHAAEPSALILSGL* |
Ga0157286_100832831 | 3300012908 | Soil | NDKDVLGYFMLTTKELMDLQKFNPAYREEKLNAAVHKAQAFAFKCIAPMTGPNSGPPCMEHATRGTPSHYSLKEDSKRGFQLGLILIGGGHTDEGIKIMNAALDHFPIGNAGQDGAHAAEPSALVLSGF* |
Ga0157306_104354732 | 3300012912 | Soil | APMTDPNSGPPCKEYATRGTPSHYSLKEDSKRGFQLGLILIGGGHTDEGIKIMNATLEHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0153915_135092391 | 3300012931 | Freshwater Wetlands | AYRDEKLNSAVQKARAFALKCIAPMTEPNKGPACRTHATQATPSHYSLKEDCKRGFQLGLILIGGGHTDEGIKIMNAAIERFPLGNTGQDGAKAAEVSALILSSL* |
Ga0164299_106883091 | 3300012958 | Soil | LQKFNPAYREEKLNAAVQKAQAFALKCIAPMTDPNFGPPCKEYATRGTPSHYSLKEDSKRGFQLGLILIGGRHTDEGIKIMNASLDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0164308_113110081 | 3300012985 | Soil | ELMDLQQFNPAYREEKLNAAVQKAQAFAFKCIAPMTDPNSGPPCKEYATRGTPSHYSLKEDSKRGFQLGLILIGGRHTDEGIKIMNASLDHFPIGNAGQDGAHAAEPTALILSGF* |
Ga0163200_12283412 | 3300013088 | Freshwater | GYFMLTTKELMDLQKFNPVYRDERLTASLQKAQSFALKHIAPMTDPNTGTATSEHVTRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMTTALDHFPIGNVGQDGAHAAEPSALVLSGF* |
Ga0157374_108176312 | 3300013296 | Miscanthus Rhizosphere | TDPNSGPPCAEHATRGTPSHYALKEESKRGFQLGLILMGGRHTDEGIKIMNASLDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0163162_124107931 | 3300013306 | Switchgrass Rhizosphere | AVQKAQAFAFRCIAPMTDPNSGPPCKEYATRGTPSHYSLKEDSKRGFQLGLILIGGRHTDEGIKIMNASLDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0157375_129845291 | 3300013308 | Miscanthus Rhizosphere | FNPAYREEKLNAAVQRAQAFAFKCIAPMTDPNSGPSCAEHATRRTPSHYALKEDSKRGFQLGLILIGGRHSDEGIKIMNASLDHFPIGNAGQDGVHAAEPSALILSGF* |
Ga0163163_108858811 | 3300014325 | Switchgrass Rhizosphere | MGQPDSPHTTRGTPAHYSAKADAKRTFQLGLVLLGGGHTEEGTKIVNAALAHFPIGNAGQDGAHAAAPSAIMLSGMRQ* |
Ga0182021_104908843 | 3300014502 | Fen | TTEELMKLQQFNPTYREEKLNAAVHKAQTFALKFIAPMTEPNSGPACKAHTTRETPKHYSLKENMKRSYELGRILFGGGYTDEGLKIMNAALEQFPFGTGGQDGAHAAEPSALLLSGF* |
Ga0182021_120692192 | 3300014502 | Fen | MHKAQAFALKCIAPMTEPNSGPACKEHTTRATPTHYSLKENMKRSYELGRILFGGGYTDEGLKIMNVALEQFPVGNGGQDGAHAAEPSALMLSGF* |
Ga0173480_109770341 | 3300015200 | Soil | PNSGPPCKEYATRGTPSHYSLKEDSKRGFQLGLILIGGRHTDEGIKIMNASLDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0132258_121433522 | 3300015371 | Arabidopsis Rhizosphere | AQAFAFKCIAPMTDPNSGPPCMEHVTRGIPSHYALKEDSKRGFQLGLILMGGGHTDEGIKIMNAALDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0132257_1023611161 | 3300015373 | Arabidopsis Rhizosphere | NDKDILGYFMLTTKELMDLQKFNPAYREEKLNAAVQRAQAFAFKCIAPMTDPNSGPPCIDHATRGTPSHYSLKEDSKRGFQLGLILIGGRHADEGIKIMNASLDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0132255_1062495321 | 3300015374 | Arabidopsis Rhizosphere | NAAVQRAQAFAFKCIAPMTDPNSGPPCAEHATRGTPSHYALKENSKRGFQLGLILIGGRHADEGIKIMNASLDHFPIGNAGQDGAHAAEPSALILSGF* |
Ga0173481_103532671 | 3300019356 | Soil | KELMDLQKFNPAYREEKLNAAVHKAQAFAFKCIAPMTGPNSGPPCMEHATRGTPSHYSLKEDSKRGFQLGLILIGGGHTDEGIKIMNAALDHFPIGNAGQDGAHAAEPSALVLSGF |
Ga0194127_109394392 | 3300020221 | Freshwater Lake | RQAQAFALKHIAPMTDPNTGTSTAGHATRGTPKHYAINEDAKRSYQLGVVLIGGGHRDEGIKIMTTALDHFPLGNAGQDGAHAAEPAALILSGF |
Ga0208505_10054551 | 3300025366 | Freshwater | SGNDPKNKDILGYFMLTLGELMKLQKFNPAYRDVKLSATIKKAQAFAFQCIAPMTEPNSGSACPEHTTRETPSHYSLRENAKRSFQLGHILIAGGYLAEGIKIMEAALAYFPIGNTGQDGAHAAEPTVLILSGN |
Ga0208743_10136163 | 3300025390 | Freshwater | AQAFAFQCIAPMTEPNSGSACPEHTTRETPSHYSLRENAKRSFQLGHILIAGGYLAEGIKIMEAALAYFPIGNTGQDGAHAAEPTVLILSGN |
Ga0207710_106011291 | 3300025900 | Switchgrass Rhizosphere | AQTFAFKCIAPITDPNSGPPCKEYATRGTPTHYSLKEDSKRGLQLGLILIGGRHTGEGIKIMNAALDHFPIGNAGQDGAHAAEPSALLLSGF |
Ga0207677_115891591 | 3300026023 | Miscanthus Rhizosphere | SDNDPNDKDVLGYFMLTTKELMDLQQFNPAYREERLNAAVQRAQAFAFKCIAPMTGPNSGPPCMEHATRGTPSHYSLKEDSKRGFQLGLILIGSRHRDEGIKIMNASLDHFPIGNAGQDGAHAAEPSALILSGF |
Ga0208443_10887222 | 3300027084 | Estuarine | NPTFREEKLTAAVKKAQAFALKHIAPMTDPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF |
Ga0208800_10177452 | 3300027193 | Estuarine | LQKAQTFALQQIAPMTEPNTGPAPRPHATAGTPKGYSVQDEAKRSYQLGLILFEGGQVNEGLRIMSAALAQFPVGNAGQDGSHAAEPSALILSSPLFR |
Ga0208800_10590592 | 3300027193 | Estuarine | QKFNPTFREEKLTAAVKKAQAFALKHIAPMTDPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF |
Ga0208164_10916891 | 3300027224 | Estuarine | AFALKHIAPMTDPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF |
Ga0208951_11772291 | 3300027621 | Freshwater Lentic | FALQQIAPMTEPNTGPAPRPHATAGTPKGYSVQDEAKRSYQLGLILFEGGQVNEGLRIMSAALAQFPVGNAGQDGSHAAEPSALILSSPLLR |
Ga0209297_12615992 | 3300027733 | Freshwater Lake | SLLDKDPKDKDVLGYFMLTTKELMDLQKFNPAYREEKLTAAVKKAQAFALKHIAPMTDPNTGTSTFEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTEEGIKIMTTALDHFPIGNVGQDGAHAAEPSTLILSGF |
Ga0209087_11186692 | 3300027734 | Freshwater Lake | GTPTHYAIKEDLKRSFQLGLVLIGGGHTEEGIKIMTTALDHFPIGNVGQDGAHAAEPSTLILSGF |
Ga0209190_10203734 | 3300027736 | Freshwater Lake | ALQQIAPMTEPNTGPAPRPHATVGTPRRYSVQDEAKRSYQLGFILLESGQQNEGLKIMSAALAQFPVGNAGQDGSHASEPSALILSNPLLR |
Ga0209444_100480713 | 3300027756 | Freshwater Lake | QIAPMTEPNTGPAPRPHATAGTPKGYSVQDEAKRSYQLGLILFEGGQVNEGLRIMSAALAQFPVGNAGQDGSHAAEPSALILSSPLFR |
Ga0209598_101040381 | 3300027760 | Freshwater Lake | DPNTGTSSSEHTTRGTPTHYGIKEGLKRSFQLGLVLIGGGHTDEGIKIMTAALDHFPIGNAGQDGTHAAEPSVLILSGF |
Ga0209550_107589332 | 3300027892 | Freshwater Lake | AVKKAQAFALKHIAPMTDPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF |
Ga0209299_10106714 | 3300027974 | Freshwater Lake | MTDPNTGTSTSEHVTRGTPKHYAIKDDLKRSFQLGLVLIGGDHTEEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF |
Ga0209299_11435121 | 3300027974 | Freshwater Lake | LGYFMLTTKELMDLQKFNPAYREEKLTAAVKKAQAFALKHIAPMTDPNTGTSTFEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTEEGIKIMTTALDHFPIGNVGQDGAHAAEPSTLILSGF |
(restricted) Ga0247838_12555732 | 3300028044 | Freshwater | PVYRDERLTASLQKAQAFALKHITPMTDPNTGTSTSKHVTRGTPKHYAIKDDLKRSFQLGLVLIGGGHTDEGVKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF |
Ga0268264_124601801 | 3300028381 | Switchgrass Rhizosphere | KDVLGYFLLTTKELMDLQKFNPAYREEKLNAAVQRAQTFAFKCISPMTDPNSGPPCKEYATRGTPSHYELKKDFKRGFQLGRILIGGQHTDEGIKIMNASLDHFPIGNAGQDGAHAAEPSALILSGF |
(restricted) Ga0247843_10119524 | 3300028569 | Freshwater | LDKDPKDKDVLGYFMLTTKELMDLQAFNPLYREPKLNAALEKAQAFALKHIAPMTDPNTGTSSSEYATRGTPTHYSIKDESKRSFQLVLILIGVGHTGEGIKIMNTALDHFPTATSARMALMPLNPPR |
(restricted) Ga0247843_12473262 | 3300028569 | Freshwater | RFNPAYREEKLTAALRKAQAFSLKNIAPMTDPNTGTSTTEHATRGTPEHYAIKDEAKRSFQLGLVLIGGGHLEEGIKIMTTALEHFPIGNGGQDGAHAAEPSALILSRF |
Ga0315908_112618161 | 3300031786 | Freshwater | KFNPAYREEKLNTAVKKAQAFALKHIAPMTDPNTGTSTSEHATRGTPTHYAIKEDLKRSFQLGLVLIGGGHTDEGIKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF |
Ga0315909_104316301 | 3300031857 | Freshwater | TRGTPTHYAIKEDLKRSFQLGLILIGGGHSEEGIKIMTTALDQFPIGNAGQDGAHAAEPSALILSGF |
Ga0315297_106778582 | 3300031873 | Sediment | NKDVLGYFMLTTEELMHLQKFNPAYREEKLNAAVKKAQAFALKCIAPMTDPNRGSACSEHRTPSTPTHYSVTDDLKRSFQLGCVLMGGGHTDEGMKIVNTALDHFPVGNAGMDGVHAAGPSAFILSGF |
Ga0302322_1029111702 | 3300031902 | Fen | AFALKCIAPMTDPNHGAVCSEHRTSSTPTHYSVSDDLKRSFQLGCVLMGGGHTDEGMKIVNTALDHFPVGNAGMDGVHAAGPSAFILSGF |
Ga0315278_118148551 | 3300031997 | Sediment | LQKFNPAYREEKLNAAVKKAQAFALKCIAPMTDPNRGSACSEHRTPSTPTHYSVADDLKRSFQLGCVLMGGGHTDEGMKIVNTALDHFPVGNAGMDGVHAAGPSAFILSGF |
Ga0315278_119681732 | 3300031997 | Sediment | RTYIAPMTEPNAGSATHPHATAGTPSRYSLKEDAKRSFQLSLILLGGGQQQEGLKIMNAALAQFPVGNAGQDGAHAAEPSALILSSRLLR |
Ga0307416_1038822181 | 3300032002 | Rhizosphere | TRGTPSHYSLKEDSKRGFQLGLILIGGRHTDEGIKIMNASLDHFPIGNAGQDGAHAAEPSALILSGF |
Ga0315292_109567181 | 3300032143 | Sediment | LNAAVKKAQAFALKCIAPMTDPNRGSACSEHRTPSTPTHYSVADDLKRSFQLGCVLMGGGHTDEGMMIVNTALDHFPVGNAGMDGVHAAGPSAFILSGF |
Ga0315283_116409852 | 3300032164 | Sediment | KCIAPMTEPNTGPACATHATRGTPSHYSLKEESKRSYQLGLVLIGGGYLDEGIKIMNAALDHFPIGNAGQDGAHAAEPSALILSGL |
Ga0315287_111053332 | 3300032397 | Sediment | MDLHKFNPAYRDEKLNSAIQRAQAFALKCIAPMTEPNNRPACREHATPATPSHYSLKGDSKRGFQLALILIGGGHMDEGIKIMNAALDHFPIGNAGQDGAHAAEPSALVLLEF |
Ga0310812_105460771 | 3300032421 | Soil | DLQKFNPAYREEKLNAAVRRAQAFAFKCIAPMTDPNSGPPCAEHATRGTPSHYALKEDSKRGFQLGLILIGGRHTDEGIKIMNASLDHFPIGNAGQDGVHAAEPSALILSGF |
Ga0316228_12553972 | 3300032579 | Freshwater | GYFMLTTEELMKLQQFNPGYREERLNAAVRKAQAFALKRIAPMTEPNIGPACTEHATRETPAHYSLKDDAKRSFQLGRILLGGGYRDEGIRIMNVALAQFPVGNVGQDGAHAAEPSALILSSF |
Ga0316230_12281651 | 3300032668 | Freshwater | LNAAMRKAQAFALQRIAPMTEPNTGPACTEHATRETPAHYSLKEDAKRSFQLGRILLGGGYRDEGLKIMNAALAQFPVGSIGQDGAHAAEPSALILSSF |
Ga0316619_119149422 | 3300033414 | Soil | PNNGPACREHATSSTPSHYSLEGDSKRGFELGLILIGGGNMDEGIKIMSASIQHFPFGNAGQDGAHAAEPSALVLSGLK |
Ga0316616_1018932172 | 3300033521 | Soil | MTDPNPGTSTSEHATRGTPKHYVIKEDLKRSFQLGLVLIGGGHTDEGVKIMTTALDHFPIGNAGQDGAHAAEPSALILSGF |
Ga0335024_0532230_352_567 | 3300034051 | Freshwater | SGHATRDTPNHYSTKEDLKRSFQLGLVLLGGGHTDEGIKIMSTAIDHFPIGNAGQDGAHAAEPSALILSGF |
Ga0364938_087246_248_589 | 3300034114 | Sediment | MDLQKFNPAYREEKLNAAVQRAQAFAFRCIAPMTDPNSGPPCAEHATRGTPSHYSLKEDSKRGFQLALILIGGRHTGEGIKIMNASLNHFPIGNAGQDGAHAAEPSALILSGF |
Ga0364927_0080848_494_856 | 3300034148 | Sediment | MLTTKELMDLQKFNPTYREEKLNAAVQRAQAFALKCIAPMTDPNSGPPCAEHATRRTPSHYALKEDSKRGFQLGLILIGGGNMDEGIKIMNATLDHFPIGNADQDGAHAAEPSALILSSY |
Ga0364929_0360278_107_505 | 3300034149 | Sediment | NDPSDKDVLGYFMLTTKELMDLRKFNPAYREEKLNAAVKKAQAFALKRIAPMTDPNSGPPCAEHATRGTPSHYSLKVDSKRGFQLGLILIGGGHTDEGTKIMNAALDHFPIGNAGQEGAHAAEPSAVILSGF |
Ga0364935_0159334_363_704 | 3300034151 | Sediment | MDLQKFNPAYREEKLNAAVQRAQAFALKCIAPMTDPNSGPPCAEHATRRTPSHYALKEDSKRGFQLGLILIGGGNMDEGIKIMNATLDHFPIGNADQDGAHAAEPSALILSSY |
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