NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F088957

Metagenome / Metatranscriptome Family F088957

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F088957
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 73 residues
Representative Sequence RVTDVRLQVEGLDADHHLVGRTLAWAIGDIAPGGETSFVAEPMPGAVRYRITVVSYDLVSLGQAP
Number of Associated Samples 90
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.00 %
% of genes near scaffold ends (potentially truncated) 89.91 %
% of genes from short scaffolds (< 2000 bps) 81.65 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (89.908 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(25.688 % of family members)
Environment Ontology (ENVO) Unclassified
(44.954 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.963 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 35.48%    Coil/Unstructured: 64.52%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
f.4.1.0: automated matchesd3qraa_3qra0.6273
b.1.25.1: LEA14-liked1xo8a_1xo80.62115
b.61.6.1: YceI-liked1wuba_1wub0.60608
b.1.4.1: beta-Galactosidase/glucuronidase domaind1jz8a21jz80.59866
b.1.4.1: beta-Galactosidase/glucuronidase domaind1yq2a11yq20.59652

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF07681DoxX 7.34
PF14255Cys_rich_CPXG 3.67
PF03707MHYT 3.67
PF07080DUF1348 2.75
PF00072Response_reg 1.83
PF03446NAD_binding_2 1.83
PF04909Amidohydro_2 1.83
PF02321OEP 1.83
PF02738MoCoBD_1 1.83
PF14833NAD_binding_11 0.92
PF03649UPF0014 0.92
PF02668TauD 0.92
PF00313CSD 0.92
PF01258zf-dskA_traR 0.92
PF13452MaoC_dehydrat_N 0.92
PF00296Bac_luciferase 0.92
PF00408PGM_PMM_IV 0.92
PF00210Ferritin 0.92
PF07883Cupin_2 0.92
PF16694Cytochrome_P460 0.92
PF07885Ion_trans_2 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 7.34
COG4270Uncharacterized membrane proteinFunction unknown [S] 7.34
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 3.67
COG3300MHYT domain, NO-binding membrane sensorSignal transduction mechanisms [T] 3.67
COG5001Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domainSignal transduction mechanisms [T] 3.67
COG3558Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamilyFunction unknown [S] 2.75
COG0033Phosphoglucomutase/phosphomannomutaseCarbohydrate transport and metabolism [G] 0.92
COG0390ABC-type iron transport system FetAB, permease componentInorganic ion transport and metabolism [P] 0.92
COG1109PhosphomannomutaseCarbohydrate transport and metabolism [G] 0.92
COG1734RNA polymerase-binding transcription factor DksATranscription [K] 0.92
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.92
COG2175Taurine dioxygenase, alpha-ketoglutarate-dependentSecondary metabolites biosynthesis, transport and catabolism [Q] 0.92

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms89.91 %
UnclassifiedrootN/A10.09 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664022|INPgaii200_c0745971All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium535Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101395625All Organisms → cellular organisms → Bacteria902Open in IMG/M
3300000955|JGI1027J12803_104455352All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300002561|JGI25384J37096_10137495All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium796Open in IMG/M
3300005340|Ga0070689_101022705All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300005347|Ga0070668_102071332All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300005447|Ga0066689_10307515All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor984Open in IMG/M
3300005455|Ga0070663_101217110All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300005557|Ga0066704_10152827All Organisms → cellular organisms → Bacteria1548Open in IMG/M
3300005558|Ga0066698_10353157All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1015Open in IMG/M
3300005569|Ga0066705_10280202All Organisms → cellular organisms → Bacteria1057Open in IMG/M
3300005569|Ga0066705_10671483All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300005598|Ga0066706_10571020All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300006049|Ga0075417_10017736All Organisms → cellular organisms → Bacteria2790Open in IMG/M
3300006358|Ga0068871_101661245All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium605Open in IMG/M
3300006797|Ga0066659_10910247All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium735Open in IMG/M
3300006797|Ga0066659_11458888All Organisms → cellular organisms → Bacteria → Proteobacteria572Open in IMG/M
3300006852|Ga0075433_11811384All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300007255|Ga0099791_10382133All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300007258|Ga0099793_10559295All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300007258|Ga0099793_10701548All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300009012|Ga0066710_100726286All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1517Open in IMG/M
3300009089|Ga0099828_10863101All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300009089|Ga0099828_10962658All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300009137|Ga0066709_103842220All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300009147|Ga0114129_11500931All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300009147|Ga0114129_12370792All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300009147|Ga0114129_12981527Not Available557Open in IMG/M
3300009174|Ga0105241_10614226All Organisms → cellular organisms → Bacteria983Open in IMG/M
3300009553|Ga0105249_11886639All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300010043|Ga0126380_12105788All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300010087|Ga0127492_1092828All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium651Open in IMG/M
3300010102|Ga0127453_1121120All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium533Open in IMG/M
3300010115|Ga0127495_1040938All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium537Open in IMG/M
3300010119|Ga0127452_1026424All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium559Open in IMG/M
3300010119|Ga0127452_1147604All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium530Open in IMG/M
3300010122|Ga0127488_1094133All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium619Open in IMG/M
3300010124|Ga0127498_1018188All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium569Open in IMG/M
3300010132|Ga0127455_1154724All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium537Open in IMG/M
3300010133|Ga0127459_1170505All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium534Open in IMG/M
3300010140|Ga0127456_1218407All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium533Open in IMG/M
3300010304|Ga0134088_10597475All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium549Open in IMG/M
3300010362|Ga0126377_10755660All Organisms → cellular organisms → Bacteria1028Open in IMG/M
3300011269|Ga0137392_10118614All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2107Open in IMG/M
3300011270|Ga0137391_10658434All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300012189|Ga0137388_11844019All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300012207|Ga0137381_11260941All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300012208|Ga0137376_10514554All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1038Open in IMG/M
3300012379|Ga0134058_1182873All Organisms → cellular organisms → Bacteria907Open in IMG/M
3300012390|Ga0134054_1201253All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium595Open in IMG/M
3300012393|Ga0134052_1194779All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium645Open in IMG/M
3300012396|Ga0134057_1084834All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium550Open in IMG/M
3300012397|Ga0134056_1208513All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium596Open in IMG/M
3300012399|Ga0134061_1229540All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium559Open in IMG/M
3300012402|Ga0134059_1343313All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium540Open in IMG/M
3300012410|Ga0134060_1131068All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium634Open in IMG/M
3300012685|Ga0137397_11240859All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium534Open in IMG/M
3300012917|Ga0137395_10192489All Organisms → cellular organisms → Bacteria1416Open in IMG/M
3300012918|Ga0137396_10194872All Organisms → cellular organisms → Bacteria → Proteobacteria1489Open in IMG/M
3300012918|Ga0137396_10832623All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium678Open in IMG/M
3300012927|Ga0137416_10339834All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1256Open in IMG/M
3300012929|Ga0137404_10100275All Organisms → cellular organisms → Bacteria2335Open in IMG/M
3300012929|Ga0137404_11312545All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium667Open in IMG/M
3300012930|Ga0137407_11057672All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium769Open in IMG/M
3300012930|Ga0137407_12411857All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300014969|Ga0157376_12644600All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300015053|Ga0137405_1366849All Organisms → cellular organisms → Bacteria → Proteobacteria4485Open in IMG/M
3300015241|Ga0137418_10082563All Organisms → cellular organisms → Bacteria → Proteobacteria2912Open in IMG/M
3300015242|Ga0137412_11246960All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300017659|Ga0134083_10412230All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium591Open in IMG/M
3300018433|Ga0066667_10210265All Organisms → cellular organisms → Bacteria1439Open in IMG/M
3300018468|Ga0066662_10074420All Organisms → cellular organisms → Bacteria → Proteobacteria2292Open in IMG/M
3300018468|Ga0066662_10683608All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium976Open in IMG/M
3300019789|Ga0137408_1014112All Organisms → cellular organisms → Bacteria1204Open in IMG/M
3300019789|Ga0137408_1295522All Organisms → cellular organisms → Bacteria1437Open in IMG/M
3300025911|Ga0207654_10465538All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300025933|Ga0207706_10108847All Organisms → cellular organisms → Bacteria → Proteobacteria2438Open in IMG/M
3300026297|Ga0209237_1193883All Organisms → cellular organisms → Bacteria → Proteobacteria665Open in IMG/M
3300026298|Ga0209236_1081947Not Available1494Open in IMG/M
3300026313|Ga0209761_1071914All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1829Open in IMG/M
3300026334|Ga0209377_1040957All Organisms → cellular organisms → Bacteria2133Open in IMG/M
3300026351|Ga0257170_1004127All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1638Open in IMG/M
3300026360|Ga0257173_1025353All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium765Open in IMG/M
3300026377|Ga0257171_1077437All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium585Open in IMG/M
3300026480|Ga0257177_1024389All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300026536|Ga0209058_1071777All Organisms → cellular organisms → Bacteria1853Open in IMG/M
3300026538|Ga0209056_10051337All Organisms → cellular organisms → Bacteria → Proteobacteria3689Open in IMG/M
3300026538|Ga0209056_10396606All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium853Open in IMG/M
3300026542|Ga0209805_1386166All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium537Open in IMG/M
3300027643|Ga0209076_1204531All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium540Open in IMG/M
3300027873|Ga0209814_10027088All Organisms → cellular organisms → Bacteria2347Open in IMG/M
3300028536|Ga0137415_10051943All Organisms → cellular organisms → Bacteria3972Open in IMG/M
3300028673|Ga0257175_1055456All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium732Open in IMG/M
3300028792|Ga0307504_10041023All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1279Open in IMG/M
3300028811|Ga0307292_10503267All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium519Open in IMG/M
3300031740|Ga0307468_100193085All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1367Open in IMG/M
3300031740|Ga0307468_100938455All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300032180|Ga0307471_104159779All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300032205|Ga0307472_101455783All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300032205|Ga0307472_101612082All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium638Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil25.69%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil19.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil17.43%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil11.01%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.59%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.83%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.92%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.92%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010087Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010102Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010115Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010119Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010122Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010124Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010132Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010133Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010140Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012379Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012390Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012393Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012396Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012397Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012399Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012402Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012410Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026351Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-BEnvironmentalOpen in IMG/M
3300026360Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-BEnvironmentalOpen in IMG/M
3300026377Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-BEnvironmentalOpen in IMG/M
3300026480Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-BEnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPgaii200_074597122228664022SoilDVRVQIXGLXADRHXVGRKLAWAIGDIPAAGETFXAVEPXPGAVDYRITVVSWDLVSRDPAPQAP
INPhiseqgaiiFebDRAFT_10139562513300000364SoilNDSQYRVTDVRLQIEGLDADRHPVGREMAWAIGDIPAAGETFFSAEPVPGAVSYRITVVSWDLVSRDRAPQAP*
JGI1027J12803_10445535213300000955SoilQAAQRWFRVSWAPPADGAGTIKGSIFNDSQYRVTDVRLQIEGLDADRHLVGRTLAWAIGDIPAAGETFFAVEPVPGAVDYRITVVSWDLVSRDPAPQAP*
JGI25384J37096_1013749513300002561Grasslands SoilPSIKGSVFNDSPYRVTDVRLQVEGLDADRHSIGRTLVWAFGDIAPGGETSFVAEPMPGAVNYRITVVSYDLVSLGQAP*
Ga0066671_1066617323300005184SoilVTDVRLEVEGLDAERRTVGRTFAWAFGDVAPGGETSFAFEAMPEVLSYRISVVTYDIVSRR*
Ga0070689_10102270533300005340Switchgrass RhizosphereRIQASVHNNSPYRVTDVRLRVEGLDADSHPVGQRSAWALGDIAPGGDTAFVVESMPGAVTYRITVISFDLVSVGQAP*
Ga0070668_10207133213300005347Switchgrass RhizosphereRVTDVRLRVEGLDADSHPVGQRTAWVFGDIAPGGDSAFVVESMPGAVTYRITVISFDLVSLGQAP*
Ga0066689_1015830823300005447SoilVHNDSRYRVTDVQLRVEGLSADNHQVGQRVVWALGDIGPNGETSVVAETIPGAVTYRITVVSFDLVSVEAP*
Ga0066689_1030751513300005447SoilSFRVTDVRLQVEGLDGNSRPVGQAFAWAIGDIVPGGETSFVVETIPGAVTYRIHVHSFDVVSGIERR*
Ga0070663_10121711013300005455Corn RhizosphereAAATIKGSIFNDSQYRVTNVRLQIEGLDADRHLVGRRLAWAIGDIPAAGDTFFAAEAVPGAVNYRITVVSWDLVSLDRAPQAP*
Ga0066704_1015282713300005557SoilSPFRVTDVRLEVQGLDAGGRPAGRTYAWALGDIAPGGDSSFVTEAVPGAVTYRITVVSYDVVSRPLARESR*
Ga0066698_1035315713300005558SoilQRVHNDSPLWVTDARLEVEGLDAGGRPVGRTFAWALGDIAPGGDSSFVIEAMPGAVTYRFTVVSYDVVSGPVARESR*
Ga0066705_1028020223300005569SoilTDVRLQVEGLDAGSRSVGRTYAWALGDIAPGEDTSFFTEAVPGAVTYQITVISYDVVSGPTARDSR*
Ga0066705_1067148323300005569SoilGLDAGSRPVGRTFAWAFGDIAPGEDTSFVIEAVPGAVTYQITVVSYDVVSGPMPLEAR*
Ga0066706_1057102013300005598SoilVSWAPPTEGVVSSIRGSVFNDSVFRVTDVRLQVEGLGPDGQSVGRTLVWAFGDIAPRGETSFLAEPLPGAVSYRITVVSYDLA
Ga0075417_1001773653300006049Populus RhizosphereIKGNVFNDSPYRVTDVRLQIDGLDADRRLVGRRLAWAFGDIVPGGETSFVAEPLPGAVDYRITVVSYDLVSQPQAP*
Ga0068871_10166124513300006358Miscanthus RhizosphereVTDVRLRVEGLDADSHPVGQRSAWALGDIAPGGDTAFVVESMPGAVTYRITVISFDLVSVGQAP*
Ga0066659_1091024723300006797SoilTDVRLQVEGLDGNSRPVGQAFAWAIGDIVPGGETSFVVETIPGAVTYRIHVHSFDVVSGIERR*
Ga0066659_1145888833300006797SoilVTDVRLQVEGLDAGGQPVGRTFAWAFGDIGPGGETSFVVEGMHGAVTYRMAVYSFDVVSAEPSRAPSIRP*
Ga0075433_1181138413300006852Populus RhizosphereRLRVEGLDADSHPVGQQTAWALGDIAPGGDSAFVVESMPGAVTYRITVISFDLVSLGQAQAP*
Ga0099791_1038213313300007255Vadose Zone SoilRIEGRVHNDSRYRVTDVRLQVEGLNADGQPVGRTVAWALGDIRPGDETSFVVECMRDAVTYRIKVDSFDLVSEGQLP*
Ga0099793_1055929523300007258Vadose Zone SoilFRVTDVQLRVEGLDAAGQPVGRTLAWAVGDIEPGGATSFVVEGMRGAVTYRIAVDSFDLVSGGQTPGKAN*
Ga0099793_1070154813300007258Vadose Zone SoilRVTDVRLRVEGLNAESHPVGQQFTWALGDIVPGGETSFVIETMPGAATYRIAVVSFDLVSLGQAP*
Ga0099794_1062462523300007265Vadose Zone SoilLDADHHPVGRTLAWAIGDIAPGGETSFVAEPVPGAVSYRITVVSYDLVSLGQAS*
Ga0066710_10055505043300009012Grasslands SoilVTDVQLRVEGLNADNHEVGQRVVWALGDIAPSGETSVVAESIPGAVNYRITVVSFDLVSVEAP
Ga0066710_10072628613300009012Grasslands SoilQAGEQSAQTGWFRVSWAPPTEGVVSSIRGSVFNDSLYRVTDVHLQVEGLGPDGQPVGRTLAWAFGDIAPAGETSFVAEPLPGAVSYRITVVSFDLVSLDQVR
Ga0099828_1086310113300009089Vadose Zone SoilSWESRPEGVVRTIEGHVYNDSPVRVTGVRLQVEGLDADRHPVGKSLAWALGDIVPGGETSFRVETMPGAVTYRISVVSYDAVSGGEAQAP*
Ga0099828_1096265823300009089Vadose Zone SoilQVEGLDADHHLVGRTLAWAIGDIAPGGETSFVAEPMPGAVRYRITVVSYDLVSLGQAP*
Ga0066709_10213000813300009137Grasslands SoilVGLEVQGLDANRQAVGRTFAWAFGDIVPGGETSFVFDAMPGAVSYRVAVVSYDVVSGPAGGGP*
Ga0066709_10384222023300009137Grasslands SoilDVRLQVEGLDADGQPVGRTFAWALGDIAPGGETSFVVEGMHGAVTYRMAVYSFDVVSAEPSRAPSVRP*
Ga0114129_1150093123300009147Populus RhizosphereNVFNDSPYRVTDVRLQIDGLDADRRLVGRRLAWAFGDIVPGGETSFVAEPLPGAVDYRITVVSYDLVSQPQAP*
Ga0114129_1237079213300009147Populus RhizosphereIVHNDSRYRVTDVQLRVEGLNADNHEVGQRVVWALGDIAPSGETSVVAESIPGAVNYRITVVSFDLVSVEAP*
Ga0114129_1298152713300009147Populus RhizosphereNDSPYRVTDVRLQIDGLDADRRLVGRRLAWAFGDIVPGGETSFVAEPLPGAVDYRITVVSYDLVSQPQAP*
Ga0105241_1061422623300009174Corn RhizosphereHWFRVSWVPPADSAAATIKGSIFNDSQYRVTNVRLQIEGLDADRHLVGRRLAWAIGDIPAAGDTFFAAEAVPGAVNYRITVVSWDLVSLDRAPQAP*
Ga0105249_1188663913300009553Switchgrass RhizosphereYRVTNVRLQIEGLDADRHLVGRRLAWAIGDIPAAGDTFFAAEAVPGAVNYRITVVSWDLVSLDRAPQAP*
Ga0126380_1210578823300010043Tropical Forest SoilDVRLQIDGLDANQRLVGRRLAWAVGDIAPRGETYFVAEPLPGAIDYRITVFSYDLVSQDQAP*
Ga0127492_109282813300010087Grasslands SoilGEQSAQTGWFRVSWAPPIEGAVSSIRGSVFNDSLYRVTDVHLQVEGLGPDGQPVGRTLVWAFGDIAPGGETSFVAEPMPGAVNYRITVVSYDLASLGQVR*
Ga0127453_112112013300010102Grasslands SoilDVRLRVEGLDPDRHLVGRTLAWAFGDIAPGGETSFVAEPMPGAVSYRITVVSYDLASLGQVR*
Ga0127495_104093823300010115Grasslands SoilVTDVRLRVEGLDPDRHLVGRTLAWAFGDIAPGGETSFVAEPMPGAVSYRITVVSYDLASLGQVR*
Ga0127452_102642423300010119Grasslands SoilFNDSPYRVTDVRLRVEGLDPDRHLVGRTLAWAFGDIAPGGETSFVAEPMPGAVSYRITVVSYDLASLGQVR*
Ga0127452_114760423300010119Grasslands SoilTDVRLQVEGLDADNHPLGQRGAWALGDIVPGGDTSFVVESMPGAVTYRITVISFDIVSLGQAP*
Ga0127488_109413313300010122Grasslands SoilRIKGSVFNDSPYRVTDVRLRVEGLDPDRHLVGRTLAWAFGDIAPGGETSFVAEPMPGAVSYRITVVSYDLASLGQVR*
Ga0127498_101818813300010124Grasslands SoilVFNDSPYRVTDVRLRVEGLDPDRHLVGRTLAWAFGDIAPGGETSFVAEPMPGAVSYRITVVSYDLASLGQVR*
Ga0127455_115472413300010132Grasslands SoilDVHLQADGLGPDGQPVGRTLAWAFGDIAPAGETSFVAEPLSGAVSYRITVVSFDLVSLGQAP*
Ga0127459_117050513300010133Grasslands SoilDVRLQVEGLDADHHLVGRTLAWAIGDIAPGGETSFVAEPMPGAVSYRITVVSYDLASLGQVR*
Ga0127456_121840713300010140Grasslands SoilQTGWFRVSWAPPIEGAVSSIRGSVFNDSLYRVTDVHLQVEGLGPDGQPVGRTLVWAFGDIAPAGETSFVAEPLSGAVSYRITVVSFDLVSLGQAP*
Ga0134088_1059747513300010304Grasslands SoilVEGLDPDRHLVGRTLAWAFGDIAPGGETSFVAEPMPGAVSYRITVVSYDLASLGQVR*
Ga0134071_1054267423300010336Grasslands SoilADNRQVGQRVVWALGDIAPNGETSFVAETIPGAVNYRITVVSFDLVSVESP*
Ga0126377_1075566023300010362Tropical Forest SoilIEGHVHNGSAVSVTDVRVAVDGMDGGGRLVGRRVAWALGDINPGGDSSFVVETVPGAVTYRMSVVSYDVVSVVEAP*
Ga0137392_1011861413300011269Vadose Zone SoilQVEGLDPDRQPVGRTLVWAFGDIAPGGETFFVAEPVPGAVSYRITVVSYDLVSLGQGR*
Ga0137391_1065843433300011270Vadose Zone SoilVRLQVEGLDTDSQPVGRTFAWALGDIPPRGETSFVVETIPGAVTYRIAVVSFDLVSLGQAP*
Ga0137388_1184401923300012189Vadose Zone SoilFRVTDVQLQVEGLDGDSRPVGQTFAWAIGDIVPGGETSFVVETIPGAVTYRILVHSFDVVSGVERR*
Ga0137381_1126094123300012207Vadose Zone SoilVSSIRGSVFNDSLYRVTDVHLQVEGLGPDGQPVGRTLAWAFGDIAPAGETSFVAEPLPGAVSYRITVVSYDLVSLGQAS*
Ga0137376_1051455433300012208Vadose Zone SoilLGPDGQPVGRTLVWAFGDIAPGGETSFVAEPLPGAVSYRITVVSFDLVSLGQAP*
Ga0137377_1090526913300012211Vadose Zone SoilRVTDVQLRVEGLNADNHEVGQRVVWALGDIAPSGETSVVAESILGAVNYRITVVSFDLVSVEAP*
Ga0134058_118287333300012379Grasslands SoilDVRLQVEGLDADNHPVGQRGAWALGDIVGGGDTSFVVESMPGAVTYRITVISFDIVSLGQAH*
Ga0134054_120125313300012390Grasslands SoilSRIKGSVFNDSPYRVTDVRLRVEGLDPDRHLVGRTLAWAFGDIAPGGETSFVAEPMPGAVSYRITVVSYDLASLGQVR*
Ga0134052_119477923300012393Grasslands SoilVTDVRLQVEGLDADNHPLGQRGAWALGDIVPGGDTSFVVESMPGAVTYRITVISFDIVSLGQAP*
Ga0134057_108483413300012396Grasslands SoilSPYRVTDVRLRVEGLDPDRHLVGRTLAWAFGDIAPGGETSFVAEPMPGAVSYRITVVSYDLASLGQVR*
Ga0134056_120851323300012397Grasslands SoilVVSRIKGSVFNDSPYRVTDVRLRVEGLDPDRHLVGRTLAWAFGDIAPGGETSFVAEPMPGAVSYRITVVSYDLASLGQVR*
Ga0134061_122954013300012399Grasslands SoilPYRVTDVRLRVEGLDPDRHLVGRTLAWAFGDIAPGGETSFVAEPMPGAVSYRITVVSYDLASLGQVR*
Ga0134059_134331323300012402Grasslands SoilVRLRVEGLDPDRHLVGRTLAWAFGDIAPGGETSFVAEPMPGAVSYRITVVSYDLASLGQVR*
Ga0134060_113106823300012410Grasslands SoilFRVSWAPPTDGVVSRIKGSVFNDSPYRVTDVRLRVEGLDPDRHLVGRTLAWAFGDIAPGGETSFVAEPMPGAVSYRITVVSYDLASLGQVR*
Ga0137397_1124085923300012685Vadose Zone SoilAAQRWFRVSWAPPTDGLVSSIKGSVFNDSLYRVTDVRLQVEGLGPDGQPVGRTLVWAFGDIAPGGETAFVAEPLPGAVSYRITVVSYDLVSLGPVR*
Ga0137395_1019248933300012917Vadose Zone SoilPTEGVVSSIKGSVFNDSPYRVTGVRLQVEGLDPDRQPVGRTLVWAFGDIAPGGETSFVAEPMPGAVSYRITVVSYDLVSLGQAS*
Ga0137396_1019487233300012918Vadose Zone SoilDVRLQVEGLDAGSRSVGRTYAWALGDIAPGEDTSFVTEAVPGAVTYQINVISYDVVSGPMARESR*
Ga0137396_1083262323300012918Vadose Zone SoilRFRVTDVRLQVEGLDAGSRSVGRTYAWALGDIAPGEDTSFVTEAVPGAVTYQINVISYDVVSGPMAREAR*
Ga0137416_1033983433300012927Vadose Zone SoilQVEGLDADRQPLGRTLVWAFGDIAPGGETSFVAEPVPGAVSYRITVVSYDLVSLGQVR*
Ga0137404_1010027513300012929Vadose Zone SoilAAQRWFHVRWAPPTEGVVSLIKGSVFNDSPYRVTDVRLQVEGLDPDRHPVGRTLVWAFGDIVPGGETSFVAEPMPDAVSYRITVVSYDLVSQGQAP*
Ga0137404_1131254513300012929Vadose Zone SoilPPTGGVVSVIKGSVLNDSPYRVTDVRLQVEGLDSDRQAVGRTFVWAFGDIAPGGETSFVAEPLPGAVSYRITVVSFDLVSLGQVP*
Ga0137407_1105767213300012930Vadose Zone SoilFNDSPYRVTDVRLQVEGLDPDRQPVGRRLVWAFGDIAPGGEASFVAEPVPGAVSYLITVVSYDLVSLGQVR*
Ga0137407_1241185723300012930Vadose Zone SoilDSRFRVTDVRLQVDGLDAGSRPVGRTFAWAFGDIAPGEDTSFVIEAVPGAVTYQITVVSYDVVSGPMPLEPR*
Ga0157376_1264460013300014969Miscanthus RhizosphereSPYRVTDVRLRVEGLDADSHPVGQRSAWALGDIAPGGDTAFVVESMPGAVTYRITVISFDLVSVGQAP*
Ga0137405_136684953300015053Vadose Zone SoilVTDVRLQVEGLDADHHPVGRTLAWAIGDIAPGGETSFVAEPVPGAVSYRITVVSYDLVSLGQAS*
Ga0137418_1008256313300015241Vadose Zone SoilPRIEATVHNDSPYRVTDVRLRVDGLNADNHQVGQRVVWALGDIAPSGETSVVAETIPGAVNYRITVVSFDLVSVGEAP*
Ga0137412_1124696013300015242Vadose Zone SoilVEGLDSDRQAVGRTFVWAFGDIAPGGVTSFVAEPMPGAVSYRIAVVSYDLVSLGQAS*
Ga0134083_1041223013300017659Grasslands SoilFRVSWAPPIEGAVSSIRGSVFNDSLYRVTDVHLQVEGLGPDGQPVGRTLVWAFGDIAPAGETSFVAEPLSGAVSYRITVVSFDLVSLGQAP
Ga0066667_1021026523300018433Grasslands SoilRLEVQGLDAGGRPAGRTYAWALGDIAPGGDSSFVTEAVPGAVTYRITVVSYDVVSRPLARESR
Ga0066662_1007442033300018468Grasslands SoilSPFRVTDVRLDVQGLDAGGRPVGRTFAWALGDIAPGGDSSFVTEAVPGAVTYRITVVSYDVVSGPVARESR
Ga0066662_1068360833300018468Grasslands SoilIKGSVFNDSPYRVTDVRLQVEGLDPDRQPVGRTLVWAFGDIAPGGETSFVAEPVPGAVSYWITVVSYDLVSLGQVR
Ga0066662_1087090413300018468Grasslands SoilNHEVGQRVVWALGDIAASGETSVVAESIPGAVNYRITVVSFDHVSVEAP
Ga0137408_101411213300019789Vadose Zone SoilPALVSGQLGTPPTDGVVSIIKGSVLNDSPYRVTDVRLQVEGLDADHHPVGRTLAWAIGDIAPGGETSFVAEPVPGAVSYRITVVSYDLVSLGQAS
Ga0137408_129552243300019789Vadose Zone SoilRVTDVRLQVEGLDADHHLVGRTLAWAIGDIAPGGETSFVAEPMPGAVRYRITVVSYDLVSLGQAP
Ga0207654_1046553823300025911Corn RhizosphereHWFRVSWVPPADSAAATIKGSIFNDSQYRVTNVRLQIEGLDADRHLVGRRLAWAIGDIPAAGDTFFAAEAVPGAVNYRITVVSWDLVSLDRAPQAP
Ga0207706_1010884723300025933Corn RhizosphereVTNVRLQIEGLDADRHLVGRRLAWAIGDIPAAGDTFFAAEAVPGAVNYRITVVSWDLVSLDRAPQAP
Ga0209237_119388313300026297Grasslands SoilVQGLDAGGRPVGRTFAWALGDIAPGGDSSFVTEAVPGAVTYRITVVSYDVVSGPVARESR
Ga0209236_108194713300026298Grasslands SoilSPYRVTDVRLQVEGLDADRQPVGRTLVWAFGDIAPGGETSFVAEPVPGAVSYLIEVVSYDLVSLGQAR
Ga0209761_107191453300026313Grasslands SoilWAPPTDGAVPSIKGSVFNDSPYRVTDVRLQVEGLDADRHSIGRTLVWAFGDIAPGGETSFVAEPMPGAVNYRITVVSYDLVSLGQAP
Ga0209377_104095753300026334SoilEGAAQRWFRVSWAPPTEGVVSSIKGSISNDSPYRVTDVRLQVEGLDADRQPVGRTLVWAFGDIAPGGETSFVAEPVPGAVSYLIKVVSYDLVSLGQAR
Ga0257170_100412713300026351SoilRVTDVRLQVEGLDPDRQPVGRTLVWAFGDIAPGGETSFVAEPVPGAVSYRITVVSYDLVSLGQGR
Ga0257173_102535323300026360SoilEPAAQRWFRVSWAPPTEGVVSRIKGSVFNDSPYRVTDVRLQVEGLDSDRHPVGRTLVWAFGDIAPSGETSFVAEPVPGAVNYRITVVSYDLVSLDQAP
Ga0257171_107743723300026377SoilVTDVRLQVEGLDSDRHPVGRTLVWAFGDIAPSGETSFVAEPVPGAVNYRITVVSYDLVSLDQAP
Ga0257177_102438923300026480SoilEQTAQPGFQVSWAPPTAGVVSSIKGTVFNDSPYRVTDVRLQVEGLDADHHLVGRTLAWAIGDIAPGGETSFVAEPMPGAVRYRITVVSYDLVSLGQAP
Ga0209058_107177713300026536SoilHNDSPLWVTDARLEVEGLDAGGRPVGRTFAWALGDIAPGGDSSFVIEAMPGAVTYRFTVVSYDVVSGPVARESR
Ga0209056_1005133713300026538SoilPFRVTDVRLDVQGLDAGGRPVGRTFAWALGDIAPGGDSSFVTEAVPGAVTYRITVVSYDVVSGPVARESR
Ga0209056_1039660613300026538SoilSPYRVADVRLRVEGLDPDRHLVGRTLAWAFGDIAPGGETSFVAEPMPGAVSYRITVVSYDLASLGQVR
Ga0209805_138616613300026542SoilVHNDSRFRVTDVRLQVEGLDAGSRPVGRTFAWAFGDIAPGDDTSFVIEAVPGAVTYQITVVSYDVVSGPISLEAR
Ga0209577_1043685323300026552SoilDVQLRVEGLNADNHEVGQRVVWALGDIAPSGETSVVAESIPGAVNYRITVVSFDLVSVEA
Ga0209076_120453113300027643Vadose Zone SoilSIKGSVFNDSPYRVTDVRLQVEGLDPDRQPVGRTLVWAFGDIAPGGETSFVAEPVPGAVSYRITVVSYDLVSLGQVR
Ga0209814_1002708813300027873Populus RhizosphereVVPTIKGNVFNDSPYRVTDVRLQIDGLDADRRLVGRRLAWAFGDIVPGGETSFVAEPLPGAVDYRITVVSYDLVSQPQAP
Ga0137415_1005194363300028536Vadose Zone SoilRVTDVQLRVEGLDAAGQPVGRTLAWAVGDIEPGGDTSFVVEGMRGAVTYRIAVDSFDLVSGGQTPGKAN
Ga0257175_105545613300028673SoilGVVSSIKGSVFNDSPYRVTDVRLQVEGLDPDRQPVGRTLVWAFGDIAPGGETSFVAEPVPGAVSYRITVVSYDLVSLGQGR
Ga0307504_1004102313300028792SoilSSIRGSVFNDSLYRVTDVHLQVEGLGPDGQPVGRTHVWAFGDIAPRGETSFVAEPLPGAVSYWITVVSFDLVSLGPVR
Ga0307292_1050326713300028811SoilPYRVTDVRLQIEGLDADRHSVGQRLAWAIGDIVPGGETFFAAEPLPGAVSYNITVVSYDLVSVGEAP
Ga0307468_10019308513300031740Hardwood Forest SoilIKGSIFNDSQYRVTDVRLQIEGLDADRHLVGRTLAWAIGDIPAAGETFFAVEPLPGAVDYRITVVSWDLVSRDRAPQAP
Ga0307468_10093845523300031740Hardwood Forest SoilTIKGSVFNDSQYRVTDVRLQIEGLDADRHLVGRRLAWAIGDIPAAGETFFTTEPLPGAVNYRITVISWDLVSLDRAPQAP
Ga0307471_10415977923300032180Hardwood Forest SoilGTLKGSVFNDSQYRVTDVRLQIEGLDADRHLVGRRLAWAIGDIPAAGETFFTTEPLPGAVNYRITVISWDLVSLDRAPQAP
Ga0307472_10145578313300032205Hardwood Forest SoilAGADGAQRWFRVSWAPPSDGAGTIKGSIFNDSQYRVTDVRLQIEGLDADRHLVGRTLAWAIGDIPAAGETFFAVEPLPGAVDYRITVLSWDLVSLDRAPQAP
Ga0307472_10161208223300032205Hardwood Forest SoilNDSTLRVADVRLQVEGLDADSRPVGQRFAWALGDIVPGGETSFVIETIPGAVDYRISVMSYHVVSTTTQAP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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