Metagenome / Metatranscriptome Family F089073

Basic Information
Family ID	F089073
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	67 residues
Representative Sequence	MDISRRQLAGVILAGTAVAQAPPAPAPQAGDAELEGARSRQRLAAQIIARVPLPMTVEPAFQFKA
Number of Associated Samples	87
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Unclassified (99.083 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere (10.092 % of family members)
Environment Ontology (ENVO)	Unclassified (55.046 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (66.055 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 38.71% β-sheet: 0.00% Coil/Unstructured: 61.29%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF01425	Amidase	49.54
PF08501	Shikimate_dh_N	14.68
PF01488	Shikimate_DH	4.59
PF13631	Cytochrom_B_N_2	2.75
PF00535	Glycos_transf_2	1.83
PF02535	Zip	0.92
PF03551	PadR	0.92
PF08281	Sigma70_r4_2	0.92
PF08335	GlnD_UR_UTase	0.92
PF12531	DUF3731	0.92
PF00355	Rieske	0.92
PF00144	Beta-lactamase	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	49.54
COG0169	Shikimate 5-dehydrogenase	Amino acid transport and metabolism [E]	14.68
COG0428	Zinc transporter ZupT	Inorganic ion transport and metabolism [P]	0.92
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.92
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.92
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.92
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.92
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.92
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.92
COG2844	UTP:GlnB (protein PII) uridylyltransferase	Signal transduction mechanisms [T]	0.92

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.08 %
All Organisms	root	All Organisms	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.08 %
cellular organisms	root	All Organisms → cellular organisms	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.08 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.08 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.08 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.92 %

Scaffold	Taxonomy	Length	IMG/M Link
3300025862\|Ga0209483_1000025	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	181857	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	53.21%
Environmental	Environmental	46.79%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	53.21%
Terrestrial	Environmental → Terrestrial	40.37%
Aquatic	Environmental → Aquatic	6.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	38.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.94%
Roots	Host-Associated → Plants → Roots	3.67%
Sediment	Environmental → Aquatic → Sediment	2.75%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.83%
Freshwater	Environmental → Aquatic → Freshwater	0.92%
Marine	Environmental → Aquatic → Marine	0.92%
Peat	Environmental → Terrestrial → Peat	0.92%
Geologic	Environmental → Terrestrial → Geologic	0.92%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	22.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.02%
Loam	Environmental → Terrestrial → Soil → Loam	11.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.59%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.75%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.92%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.92%
Mine	Environmental → Terrestrial → Geologic → Mine	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	22.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.01%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.67%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.75%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	10.09%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	8.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	7.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.59%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.75%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.83%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.92%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.92%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.92%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101447401	3300000567	Peatlands Soil	MDISRRQLAGIILASTAVAQAPPKPQPESDIETARLQQRAAAQIIARVPLPMTTEPAFQFKA*
Ga0055498_100258181	3300004058	Natural And Restored Wetlands	LAPCVGRALRCGLTAYNGRMDISRRQLAGVVFAATASAQEPPKPEAEADAARVQQRARAQAIASVPLPMTTEPAFQFKA*
Ga0062593_1017756332	3300004114	Soil	MDISRRQLAGVVFAGTVVGQSAAQAPPKPQPEAELDTARQRQRIAAQVIARVPLPMTVEPAFQFKA*
Ga0063356_1018191412	3300004463	Arabidopsis Thaliana Rhizosphere	VIACPTAYNGRMDISRRPLAGVVLASTAIAQAPPKPQPEAELEAARTRQRAGAQAIARVPLPMTTEPAFQFKA*
Ga0070676_109935581	3300005328	Miscanthus Rhizosphere	VTGDTVARPTQRDRLPEYVTTYNGRMDISRRQLAGVVLAATASAQEPPKPEAAPEAEARVRQRARAEAIARVPLPMTTEPAFQFKA*
Ga0070683_1001308033	3300005329	Corn Rhizosphere	MDISRRQLAGVILAGTAVAQVPQPPAAQSADAELEGARSERRAAARIIARVALPMTTEPAFQFKA*
Ga0070683_1001405712	3300005329	Corn Rhizosphere	MAISRRQLAGVILAGTAVAQAPPPPTTTRSGDTELETAQSARRTAAQIIARIPLPMTTEPAFQFKA*
Ga0070683_1021949981	3300005329	Corn Rhizosphere	VILAGTAAAQAPPPPTTGQSGNTELESARSARRTAAQIIARVPLPMTTEPAFQFKA*
Ga0070690_1008189691	3300005330	Switchgrass Rhizosphere	MRLTREHRTYNGRMDISRRQLAGVILASTVVGQSAAQAPPKPQPDTEVDTARQRQKTMAQAIARVPLPMTVEPAFQFKA*
Ga0068869_1012977322	3300005334	Miscanthus Rhizosphere	LVIAVRALRCALSTYNGRMDISRRQLAGVVLAATASAQEPPKPEAAPEAEARVRQRARAEAIARVPLPMTTEPAFQFKA*
Ga0070680_1000532492	3300005336	Corn Rhizosphere	MDISRRQLAGVILASTAVAQVPQPPAPQSADAELEGARSERRAAARIIARVALPMTTEPAFQFKA*
Ga0068868_1008545971	3300005338	Miscanthus Rhizosphere	MAISRRQLAGVILAGSAVAQAPPPTPTQSGDTELEAARAARHTAAQIIARIPLPMTTEPAFQFKA*
Ga0068868_1022309331	3300005338	Miscanthus Rhizosphere	MDISRRQLAGVVLAATASAQEPPKPEAAPEAEARVRQRARAEAIARVPLPMTTEPAFQFKA*
Ga0070709_112360952	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDISRRQLAGVILAGTAVAQAPPAPAPQAGDAALEGARSRQRLAAQIIARVPLPMTVEPAFQFKA*
Ga0070711_1006647712	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RMDISRRQLAAVVLASTAAAQAPPAPKPEPEGDVDGARLQQRAAAQIIARVPLPMTIEPAFLFKA*
Ga0070711_1013839392	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDISRRQLGGVLAGATVATASAQAPPQPQPGDGLESARLQQRAAAQAIARIPLPMSTEPAFQFKA*
Ga0070705_1011400202	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	TYNGRMDISRRQLAGVILAGTAVAQAPPKPQPDTEIDTARQRQRIAAQAIARVMLPMTTEPAFQFKA*
Ga0068867_1011549632	3300005459	Miscanthus Rhizosphere	MDISRRQLAGVILASTAVAQEAAAQEPPKPESDVEGARAQLRASAQAIARVPLPMTVEPAFQFKA*
Ga0070699_1016728302	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	NGRMDISRRQLAGVILAGTAVAQVPQPPAAQSADAELEGARSERRAAARIIAQVALPMTTEPAFQFKA*
Ga0068855_10000167323	3300005563	Corn Rhizosphere	MDISRRQLAGVILAGTAAAQAPPPPTTGQSGNTELESARSARRTAAQIIARVPLPMTTEPAFQFKA*
Ga0068855_1012875062	3300005563	Corn Rhizosphere	MDISRRQLAGVILAGTAVAQAPPAPAPQAGDAELEGARSRQRLAAQIIARVPLPMTVEPAFQFKA*
Ga0068857_1014681392	3300005577	Corn Rhizosphere	TYNGRMDISRRQLAGVVLAATASAQEPPKPEAAPEAEARVRQRARAEAIARVPLPMTTEPAFQFKA*
Ga0068856_1000144044	3300005614	Corn Rhizosphere	LRPERRITTYNGRMDISRRQLAGVILAGTAAAQAPPPPTTEQSGITELESARSARRTAAQIIARVPLPMTTEPAFQFKA*
Ga0068856_1015419182	3300005614	Corn Rhizosphere	MDISRRQLAGVILAGTAVAQAPPAPAPQADDAELEGARSRQRLAAQIIARVPLPMTVEPAFQFKA*
Ga0068852_1006793232	3300005616	Corn Rhizosphere	MDISRRQLAGVILAGTAAAQAPPPPTTEQSGITELESARSARRTAAQIIARIPLPMTTEPAFQFKA*
Ga0068852_1013139492	3300005616	Corn Rhizosphere	MDISRRQLAGVVLAGTVVGQSAAQAPPKPQPEAELDTARQRQRIAAQVIARVPLPMTVEPAFQFRA*
Ga0074470_102304982	3300005836	Sediment (Intertidal)	MDISRRQLAGVVLAATISAQEPPKVEADADAARVQQRARAQAIASVPLPMTVEPAFQFKA
Ga0068858_1000602593	3300005842	Switchgrass Rhizosphere	MELSRRQLAGVILAGTAAAQAPAPQPPTTTQSADTELETARSARRTAAQIIARVPLPMTVEPAFQFKA*
Ga0068858_1006351431	3300005842	Switchgrass Rhizosphere	QLAGVILASTAVAQVPTPPPPAAQSADAELEAAKSQQRLRAQIIAQVPLPMTTGPAFLFKA*
Ga0068858_1014477622	3300005842	Switchgrass Rhizosphere	LVIAVRALRCALSTYNGRMDISRRQLAGVVLAATASAQEPPKPEAAPEAEARVRQRARAETIARVPLPMTTEPAFQFKA*
Ga0075017_1002832322	3300006059	Watersheds	LRPSKIACPTPILSDTYNGRMDISRRQLAVVVLASAASAQTPAPSKPQPEGDLDAARVRQRASAQAIARIPLPMNVEPAFQFKA*
Ga0075015_1000756652	3300006102	Watersheds	MDISRRQLAVVVLASAASAQTPAPSKPQPEGDLDAARVRQRASAQAIARIPLPMNVEPAFQFKA*
Ga0097621_1012307532	3300006237	Miscanthus Rhizosphere	MDISRRQLAVVVLAATASAQVPAQAPPPATQSGDAELEGARSERKIAAQMIARVALPMTVEPAFQFKA*
Ga0068871_1000137821	3300006358	Miscanthus Rhizosphere	YNGRMDISRRQLAGVVFAATASAQEPPKPEADTDAARTQQRARAQAIARVPLPMTTEPAFQFKA*
Ga0068871_1001094484	3300006358	Miscanthus Rhizosphere	MDISRRQLAGVILAGTAAAQAPPPPTTTQSADTELDTARSARRTAAQIIARVPLPMTL
Ga0075522_1000004160	3300006638	Arctic Peat Soil	VRVLKHPLQAEAFSTTYNGRMDISRRQLAGVILAGTAVAQAPPTPAPQSADAELKAARSERRVAAQIIARVGLPMTVEPAFQFKA*
Ga0073928_112234581	3300006893	Iron-Sulfur Acid Spring	SDNGRMDISRRQLAGVVLASTAIAQAPPKPQPEAEVDDARARQRIAAQAIARIPLPMATEPAFQFKA*
Ga0105240_110357331	3300009093	Corn Rhizosphere	RITTYNGRMDISRRQLAGVILAGSAVAQAPPPTPTQSGDTELEAARAARHTAAQIIARIPLPMTTEPAFQFKA*
Ga0105245_100870634	3300009098	Miscanthus Rhizosphere	MDISRRQLAGVILAGTAAAQAPPPPTTTQSADTELDTARSARRTAAQIIARVPLPMTLEPAFQFKA*
Ga0105245_105736982	3300009098	Miscanthus Rhizosphere	MDISRRQLAGVVLAATASAQAPPKPEAETDAEAEARLRQRARAEAIARVPLPMTTEPAFQFKA*
Ga0105247_106410471	3300009101	Switchgrass Rhizosphere	YNGRMDISRRQLAGVILAGTAAAQAPPPPTTTQSADTELDTARSARRTAAQIIARVPLPMTLEPAFQFKA*
Ga0105243_123812611	3300009148	Miscanthus Rhizosphere	YNGRMDISRRQLAGVILASTAVAQEAAAQEPPKPESDVEGARAQLRASAQAIARVPLPMTVEPAFQFKA*
Ga0105237_100590351	3300009545	Corn Rhizosphere	MDISRRQLAGVILAATTVGQSAAQAPPPSTPQPNDAGLDAARAEQRVRAQIIARVPLPMTTEPAFHF
Ga0105238_109884522	3300009551	Corn Rhizosphere	MDISRRQLAGVILAGTAAAQAPPPPTTEQSGITELESARSARRTAAQIIARVPLPMTTEPAFQFKA*
Ga0105239_107214112	3300010375	Corn Rhizosphere	MDISRRQLAGVILAATTVGQIAAQAPPPSTPQPNDAGLDAARAEQRVRALIIARVTLPTTTEPAFHFKA*
Ga0136449_1001209245	3300010379	Peatlands Soil	MDISRRQLAGVFLAGTAVAQVPVQAPPAPAPQSADSELEAVRSQQLVRAQIIARVPLPMTTEPAFHFKA*
Ga0134124_121087892	3300010397	Terrestrial Soil	MDLSRRQLAGVILAGTAVAQAPPAPAPQSADAELEAAKSQQRLRAQIVARVPLAMTVEPAFQFKA*
Ga0134127_105158241	3300010399	Terrestrial Soil	GVILAGTAVAQVPQPPAAQSADAELEGARSERRAAARIIARVALPMTTEPAFQFKA*
Ga0134127_112893121	3300010399	Terrestrial Soil	YNGRMDISRRQLAGVVLAGTVVGQSAAQAPPKPQPEAELDTARQRQRIAAQVIARVPLPMTVEPAFQFRA*
Ga0134121_108253122	3300010401	Terrestrial Soil	VILAGTASAQAPPPPTTTQSADTELETARSARRTAAQIIARVPLPMTVEPAFQFKA*
Ga0134121_115431742	3300010401	Terrestrial Soil	MDISRRQLAGVVFAATASAQEPPKPEPDADAARIQQRARAQAIASVPLPMTTEPAFQFKA
Ga0153915_107077562	3300012931	Freshwater Wetlands	MDISRRQLAGVLLAGTAVAQAPPPPKPQSDSDVDAARGQQRAAAQVIARVPLPMTTEPAFQFKA*
Ga0168317_10007186	3300012982	Weathered Mine Tailings	MDISRRQLAAVVLAGTAAAQTPPAPKPEPEGDVDGARLRQRAAAQIIARVPLPMTVEPAFQFKA*
Ga0157370_100315695	3300013104	Corn Rhizosphere	MDISRRQLAGVILASTAVAQVPQPPAPQSADAELEGARSERRAAARIIAQVALPMTTEPAFQFKA*
Ga0157369_109014482	3300013105	Corn Rhizosphere	MDISRRQLAGVILASTAVAQAPPPSTPQPNDAGLDAARAEQRVRALIIARVPLPMTTEPALHFKA*
Ga0157378_128558772	3300013297	Miscanthus Rhizosphere	MDISRRQLAGVILAGTAVSKAAAQTPPDTPAESSDADLEAARGERRIAAQIIARVPLPMTTEPAFQFKA*
Ga0157375_100085237	3300013308	Miscanthus Rhizosphere	MELSRRQLAGVILAGTAAAQAPAPQPPTTTQSADTELGTARSARRTAAQIIARVPLPMTVEPAFQFKA*
Ga0163163_112954912	3300014325	Switchgrass Rhizosphere	MELSRRQLAGVILAGTAAAQAPPPPTTTQSADTELETARSARRTAAQIIARVPLPMTVEPAFQFKA*
Ga0182024_105003002	3300014501	Permafrost	MDISRRQLAGVILAGTAVAQVPAQPPPAPAPQSGDAELEAARSQRRVAGQIIARVPLPMTTEPAFHFKA*
Ga0157379_104508891	3300014968	Switchgrass Rhizosphere	LRPSKIACPTYTYNGRMDISRRQLAGVILASTAVAQVPTPPPPAAQSADAELEAAKSQQRLRAQIIAQVPLPMTAGPAFLFKA*
Ga0157376_106891171	3300014969	Miscanthus Rhizosphere	MELSRRQLAGVILAGTAAAQAPAPQPPTTTQSADTELETARSARRTAAQIIARVPLPMTLEPAFQFKA*
Ga0157376_111237622	3300014969	Miscanthus Rhizosphere	MDISRRQLAGVVFAATASAQEPPKPEADADAARTQQRARAQAIARVPLPMTTEPAFQFKA
Ga0187776_101688112	3300017966	Tropical Peatland	MDISRRQLAGVVLGATASVQAHAQAPPTPPQGDDLETARLQQRASAQAIARVPLPMSTEPAFQFKA
Ga0187773_102908712	3300018064	Tropical Peatland	MDISRRQLAGVVLGATASVQAHAQAPPTPPQVDDFETARLQQRASAQAIARVPLPMSTEPAFQFKA
Ga0206356_114672801	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	TTYNGRMDISRRQLAGVILASTAVAQVPQPPAPQSADAELEGARSERRAAARIIARVALPMTTEPAFQFKA
Ga0206354_105970922	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	TGDKIACPTTYNGRMDISRRQLAGVILAGTAAAQAPPPPTTGQSGITELESARSARRTAAQIIARVPLPMTTEPAFQFKA
Ga0210400_100117905	3300021170	Soil	MDISRRQLAGVVLAATASAQAPPKPQPEAEVEDARARQRASAQAIARIPLPMTTEPAFQFKA
Ga0210383_101146682	3300021407	Soil	MDISRRQLAGVILAGTAVAQAPPPPTPAQSGDAQLEAARSERRVAAQIIARVPLPMTTEPAFHFKA
Ga0210394_110770172	3300021420	Soil	MDISRRQLAGVILVGTAVAQTPPSPTPAPQSGDAELESARSQQRVRAQVIARVPVPMTTEPAF
Ga0210402_104315752	3300021478	Soil	MDISRRQLAGILVASTAVAQAPPSPAPQSADAELEAAKSQQRGRAQIIARVPLPMTTEPAFHFKA
Ga0212123_106740882	3300022557	Iron-Sulfur Acid Spring	MDISRRQLAGVVLASTAIAQAPPKPQPEAEVDDARARQRIAAQAIARIPLPMATEPAFQFKA
Ga0209483_1000025127	3300025862	Arctic Peat Soil	VRVLKHPLQAEAFSTTYNGRMDISRRQLAGVILAGTAVAQAPPTPAPQSADAELKAARSERRVAAQIIARVGLPMTVEPAFQFKA
Ga0207654_100128653	3300025911	Corn Rhizosphere	MDISRRQLAGVILAGTAVAQVPQPPAAQSADAELEGARSERRAAARIIARVALPMTTEPAFQFKA
Ga0207695_1000142613	3300025913	Corn Rhizosphere	MDISRRQLAGVILAGTAAAQAPPPPTTGQSGNTELESARSARRTAAQIIARVPLPMTTEPAFQFKA
Ga0207695_106134902	3300025913	Corn Rhizosphere	MELSRRQLAGVILAGTAAAQAPAPQPPTTTQSADTELGTARSARRTAAQIIARVPLPMTVEPAFQFKA
Ga0207671_100606372	3300025914	Corn Rhizosphere	MDISRRQLAGVILAATTVGQSAAQAPPPSTPQPNDAGLDAARAEQRVRAQIIARVPLPLTTEPAFHFKA
Ga0207671_109013842	3300025914	Corn Rhizosphere	MELSRRQLAGVILAGTAAAQAPAPQPPTTTQSADTELETARSARRTAAQIIARVPLPMTVEPAFQFKA
Ga0207663_101986252	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MDISRRQLAAVVLASTAAAQAPPAPKPEPEADVDGARLQQRAAAQIIARVPLPMTIEPAFLFKA
Ga0207660_100820952	3300025917	Corn Rhizosphere	MDISRRQLAGVILASTAVAQVPQPPAPQSADAELEGARSERRAAARIIARVALPMTTEPAFQFKA
Ga0207649_101230112	3300025920	Corn Rhizosphere	LTGDKIACPTTYNGRMDISRRQLAGVILAGTAVAQVPQPPAAQSADAELEGARSERRAAARIIARVALPMTTEPAFQFKA
Ga0207687_102019131	3300025927	Miscanthus Rhizosphere	ILAGTAATQAQAQAPPSPAKQSLTPQAADAELEAARSERRIAAQIIARVPLPMTVEPAFQFKA
Ga0207687_103744002	3300025927	Miscanthus Rhizosphere	VRALRWALTTYNGRMDISRRQLAGVVLAATASAQAPPKPEAETDAEAEARLRQRARAEAIARVPLPMTTEPAFQFKA
Ga0207687_104895132	3300025927	Miscanthus Rhizosphere	MDISRRQLAGVILAGTVVSKAAAQTPPAAPAESSDADLEAARGERRIAAQIIARVPLPMTTEPAFQFKA
Ga0207709_113892991	3300025935	Miscanthus Rhizosphere	TYNGRMDISRRQLAGVILASTAVAQEAAAQEPPKPESDVEGARAQLRASAQAIARVPLPMTVEPAFQFKA
Ga0207709_114224171	3300025935	Miscanthus Rhizosphere	MDISRRQLAGVVLAGTVVGQSAAQAPPKPQPEAELDTARQRQRIAAQVIARVPLPMTVEPAFQFRA
Ga0207670_113981682	3300025936	Switchgrass Rhizosphere	MDISRRQLAGVILASTVVGQSAAQAPPKPQPDTEVDTARQRQKTMAQAIARVPLPMTVEPAFQFKA
Ga0207704_105100392	3300025938	Miscanthus Rhizosphere	LVIAVRALRCALSTYNGRMDISRRQLAGVVLAATASAQEPPKPEAAPEAEARVRQRARAEAIARVPLPMTTEPAFQFKA
Ga0207689_110774441	3300025942	Miscanthus Rhizosphere	MDISRRQLAGVVLAATASAQEPPKPEAAPEAEARVRQRARAEAIARVPLPMTTEPAFQFK
Ga0207677_102502822	3300026023	Miscanthus Rhizosphere	MDISRRQLAGVILASTVVGQSAAQAPPKPQPDTEVDTARQRQKTMAQAIARLPLPMTVEPAFQFKA
Ga0207703_113082032	3300026035	Switchgrass Rhizosphere	MDISRRQLAGVILASTAVAQVPTPPPPAAQSADAELEAAKSQQRLRAQIIAQVPLPMTTGPAFLFKA
Ga0207703_113196311	3300026035	Switchgrass Rhizosphere	VRALRCALSTYNGRMDISRRQLAGVVLAATASAQEPPKPEAAPEAEARVRQRARAETIARVPLPMTTEPAFQFKA
Ga0207702_100934282	3300026078	Corn Rhizosphere	MDISRRQLAGVILAGTAAAQAPPPPTTEQSGITELESARSARRTAAQIIARVPLPMTTEPAFQFKA
Ga0207702_111682422	3300026078	Corn Rhizosphere	MDISRRQLAGVILAGTAVAQAPPAPAPQADDAELEGARSRQRLAAQIIARVPLPMTVEPAFQFKA
Ga0207648_108472602	3300026089	Miscanthus Rhizosphere	MDISRRQLAGVILASTAVAQEAAAQEPPKPESDVEGARAQLRASAQAIARVPLPMTVEPAFQFKA
Ga0207674_104563892	3300026116	Corn Rhizosphere	IMRLTREHRIYNGRMDISRRQLAGVILASTVVGQSAAQAPPKPQPDTEVDTARQRQKTMAQAIARVPLPMTVEPAFQFKA
Ga0207698_117329152	3300026142	Corn Rhizosphere	GVILAGTAAAQAPPPPTTEQSGITELESARSARRTAAQIIARVPLPMTTEPAFQFKA
Ga0209517_100264916	3300027854	Peatlands Soil	MDISRRQLAGIILASTAVAQAPPKPQPESDIETARLQQRAAAQIIARVPLPMTTEPAFQFKA
Ga0265318_102764341	3300028577	Rhizosphere	DISRRQLAGVILASTAVAQAPPTPTPAPQTADSELEAAKSQQRVRAQVIARVPLPMTTEPAFHFKA
Ga0170824_1038349841	3300031231	Forest Soil	AGVVLAGTAAATVSGQAPPKPQPEAEADAARQRQRVGAQIIARIPLPMSAEPAFQFKA
Ga0170824_1060511662	3300031231	Forest Soil	MDISRRQLAGVILAGTAAAQAPPPATPIPQSGEAELETARAARRTAAEIIARVPLPMTVEPAFQFKA
Ga0170818_1073157312	3300031474	Forest Soil	MDISRRQLAGVVLAGTAAATVSGQAPPKPQPEAEADAARQRQRVGAQIIARIPLPMSAEPAFQFKA
Ga0265342_107114601	3300031712	Rhizosphere	MDISRRQLAGVILASTAVAQAPPTPGPQPADAEFEAVRSQQRLRAQTIARVPLPMTTEPAFHFKA
Ga0307469_121112832	3300031720	Hardwood Forest Soil	MDISRRQLAGVLLASTAVAQAPPKPQPEADVDSARSQQRAAAQVIARVPLPMTTEPAFQFKA
Ga0307475_112020401	3300031754	Hardwood Forest Soil	MDISRRQLAGVVLAATASAAPPKPQPEAEVEDARARQRASAQAIARIPLP
Ga0311301_103262722	3300032160	Peatlands Soil	MDISRRQLAGVFLAGTAVAQVPVQAPPAPAPQSADSELEAARSQQRGRAQIIARVPLPMTTEPAFHFKA
Ga0310810_102019473	3300033412	Soil	MDISRRQLAGVILASTAAAQAPPKPQPDTEIDTARLRQRAAAQAIARIMLPMTTEPAFQFKA
Ga0316620_123076662	3300033480	Soil	MDISRRHLAAVVLASTAAAQAPPAPKPEPEGDVDGARLRQRAAAQIIARVALPMTTEPAFLFKA
Ga0316628_1008624082	3300033513	Soil	MDISRRQLAAVVLASTAAAQAPPAPKPEPEGDVDGARLRQRAAAQIIARVPLPMTVEPAFLFKA
Ga0326723_0285306_378_566	3300034090	Peat Soil	MDISRRQLAGVLLASTAVAQAPPKPQPEADVDAARLQQRAAAQVISRVPLPMTTEPAFQFKA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089073

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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