Metagenome / Metatranscriptome Family F089312

Basic Information
Family ID	F089312
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	74 residues
Representative Sequence	MYDTSIVRVARENPYIRPLENARRVAGGDEQLAEALRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLKRRAA
Number of Associated Samples	91
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.73 %
% of genes near scaffold ends (potentially truncated)	29.36 %
% of genes from short scaffolds (< 2000 bps)	87.16 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Most Common Taxonomy
Group	Unclassified (52.294 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (8.257 % of family members)
Environment Ontology (ENVO)	Unclassified (33.028 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.615 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.63% β-sheet: 0.00% Coil/Unstructured: 54.37%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00083	Sugar_tr	10.09
PF09347	DUF1989	8.26
PF01042	Ribonuc_L-PSP	2.75
PF01381	HTH_3	1.83
PF07690	MFS_1	1.83
PF04366	Ysc84	1.83
PF03401	TctC	0.92
PF01972	SDH_sah	0.92
PF00120	Gln-synt_C	0.92
PF12832	MFS_1_like	0.92
PF01979	Amidohydro_1	0.92
PF05987	DUF898	0.92
PF13193	AMP-binding_C	0.92
PF02775	TPP_enzyme_C	0.92
PF05977	MFS_3	0.92
PF13450	NAD_binding_8	0.92
PF00561	Abhydrolase_1	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	2.75
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.83
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	1.83
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.92
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.92
COG4269	Uncharacterized membrane protein YjgN, DUF898 family	Function unknown [S]	0.92

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.29 %
All Organisms	root	All Organisms	47.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.29 %
cellular organisms	root	All Organisms → cellular organisms	47.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.35 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.29 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.29 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	2.75 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	2.75 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.92 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.29 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.75 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.83 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.92 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.92 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.29 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.75 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.83 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.92 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.92 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.29 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.75 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.83 %
Roseomonas oleicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas oleicola	0.92 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.92 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16678236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1061	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105826720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3633	Open in IMG/M
3300000559\|F14TC_100280928	Not Available	502	Open in IMG/M
3300003324\|soilH2_10203961	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300004156\|Ga0062589_101633671	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300004157\|Ga0062590_100620484	Not Available	955	Open in IMG/M
3300004157\|Ga0062590_100705247	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300004157\|Ga0062590_101853055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas oleicola	620	Open in IMG/M
3300004463\|Ga0063356_104307960	Not Available	612	Open in IMG/M
3300004643\|Ga0062591_100675720	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300005093\|Ga0062594_103370859	Not Available	502	Open in IMG/M
3300005183\|Ga0068993_10008623	All Organisms → cellular organisms → Bacteria → Proteobacteria	2226	Open in IMG/M
3300005295\|Ga0065707_10171763	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300005328\|Ga0070676_10397054	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300005332\|Ga0066388_100354001	All Organisms → cellular organisms → Bacteria	2115	Open in IMG/M
3300005332\|Ga0066388_100967392	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300005332\|Ga0066388_103390413	Not Available	814	Open in IMG/M
3300005343\|Ga0070687_100361481	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300005367\|Ga0070667_101420162	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300005434\|Ga0070709_11619731	Not Available	527	Open in IMG/M
3300005439\|Ga0070711_100336860	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300005440\|Ga0070705_100037015	All Organisms → cellular organisms → Bacteria	2749	Open in IMG/M
3300005440\|Ga0070705_101125917	Not Available	643	Open in IMG/M
3300005526\|Ga0073909_10110286	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300005539\|Ga0068853_100463279	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300005616\|Ga0068852_100531645	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300005618\|Ga0068864_100443707	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300005713\|Ga0066905_100161400	All Organisms → cellular organisms → Bacteria → Proteobacteria	1629	Open in IMG/M
3300005713\|Ga0066905_100647453	Not Available	900	Open in IMG/M
3300005719\|Ga0068861_100857130	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300005841\|Ga0068863_100688411	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300005844\|Ga0068862_100382716	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300006049\|Ga0075417_10448455	Not Available	643	Open in IMG/M
3300006173\|Ga0070716_101511840	Not Available	549	Open in IMG/M
3300006175\|Ga0070712_101701318	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300006196\|Ga0075422_10115979	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300006572\|Ga0074051_11461706	Not Available	581	Open in IMG/M
3300006581\|Ga0074048_12748841	Not Available	742	Open in IMG/M
3300006847\|Ga0075431_101748988	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300006876\|Ga0079217_10001423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6472	Open in IMG/M
3300006918\|Ga0079216_10817105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	688	Open in IMG/M
3300007004\|Ga0079218_10924223	Not Available	861	Open in IMG/M
3300007004\|Ga0079218_13454424	Not Available	536	Open in IMG/M
3300007255\|Ga0099791_10684428	Not Available	504	Open in IMG/M
3300009012\|Ga0066710_102139372	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300009156\|Ga0111538_10810803	Not Available	1185	Open in IMG/M
3300009156\|Ga0111538_11339559	Not Available	903	Open in IMG/M
3300009162\|Ga0075423_12078340	Not Available	616	Open in IMG/M
3300009609\|Ga0105347_1272301	Not Available	702	Open in IMG/M
3300009610\|Ga0105340_1036737	Not Available	1906	Open in IMG/M
3300009678\|Ga0105252_10283977	Not Available	734	Open in IMG/M
3300009811\|Ga0105084_1081211	Not Available	598	Open in IMG/M
3300010147\|Ga0126319_1374754	Not Available	541	Open in IMG/M
3300010360\|Ga0126372_12770244	Not Available	542	Open in IMG/M
3300010397\|Ga0134124_11053784	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300010399\|Ga0134127_11639201	Not Available	718	Open in IMG/M
3300010400\|Ga0134122_10001252	All Organisms → cellular organisms → Bacteria → Proteobacteria	18206	Open in IMG/M
3300010400\|Ga0134122_10660338	Not Available	976	Open in IMG/M
3300010403\|Ga0134123_10697689	Not Available	992	Open in IMG/M
3300011398\|Ga0137348_1066997	Not Available	619	Open in IMG/M
3300011439\|Ga0137432_1008870	All Organisms → cellular organisms → Bacteria → Proteobacteria	2802	Open in IMG/M
3300011439\|Ga0137432_1101349	Not Available	903	Open in IMG/M
3300011442\|Ga0137437_1009503	All Organisms → cellular organisms → Bacteria → Proteobacteria	3382	Open in IMG/M
3300012212\|Ga0150985_114123213	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300012469\|Ga0150984_110002142	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300012986\|Ga0164304_10889863	Not Available	695	Open in IMG/M
3300014745\|Ga0157377_10372784	Not Available	964	Open in IMG/M
3300014868\|Ga0180088_1029171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	899	Open in IMG/M
3300015371\|Ga0132258_12468532	Not Available	1301	Open in IMG/M
3300015373\|Ga0132257_103211388	Not Available	595	Open in IMG/M
3300018083\|Ga0184628_10037165	All Organisms → cellular organisms → Bacteria	2442	Open in IMG/M
3300018422\|Ga0190265_10743706	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300018422\|Ga0190265_11145878	Not Available	897	Open in IMG/M
3300020202\|Ga0196964_10204936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	913	Open in IMG/M
3300020202\|Ga0196964_10313285	Not Available	745	Open in IMG/M
3300020215\|Ga0196963_10195082	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300025580\|Ga0210138_1042127	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300025899\|Ga0207642_11071457	Not Available	520	Open in IMG/M
3300025916\|Ga0207663_11293450	Not Available	587	Open in IMG/M
3300026041\|Ga0207639_10731576	Not Available	919	Open in IMG/M
3300026088\|Ga0207641_10867625	Not Available	895	Open in IMG/M
3300026088\|Ga0207641_11865083	Not Available	603	Open in IMG/M
3300026095\|Ga0207676_10049048	All Organisms → cellular organisms → Bacteria → Proteobacteria	3282	Open in IMG/M
3300027533\|Ga0208185_1059195	Not Available	917	Open in IMG/M
3300027821\|Ga0209811_10022368	Not Available	2076	Open in IMG/M
3300027873\|Ga0209814_10324752	Not Available	671	Open in IMG/M
3300027886\|Ga0209486_10110972	All Organisms → cellular organisms → Bacteria → Proteobacteria	1468	Open in IMG/M
3300027886\|Ga0209486_10359790	Not Available	873	Open in IMG/M
3300027886\|Ga0209486_11091394	Not Available	541	Open in IMG/M
3300028281\|Ga0247689_1000665	All Organisms → cellular organisms → Bacteria → Proteobacteria	3488	Open in IMG/M
3300028380\|Ga0268265_10485440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1161	Open in IMG/M
3300028809\|Ga0247824_11114163	Not Available	505	Open in IMG/M
3300030006\|Ga0299907_10148493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1938	Open in IMG/M
3300031198\|Ga0307500_10004429	All Organisms → cellular organisms → Bacteria → Proteobacteria	3062	Open in IMG/M
3300031199\|Ga0307495_10131565	All Organisms → cellular organisms → Bacteria → Proteobacteria	628	Open in IMG/M
3300031538\|Ga0310888_10234771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1023	Open in IMG/M
3300031720\|Ga0307469_10296568	Not Available	1329	Open in IMG/M
3300031740\|Ga0307468_100046620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2226	Open in IMG/M
3300031740\|Ga0307468_100948141	Not Available	751	Open in IMG/M
3300031740\|Ga0307468_101452323	Not Available	633	Open in IMG/M
3300031854\|Ga0310904_10816461	Not Available	654	Open in IMG/M
3300031854\|Ga0310904_11440322	Not Available	502	Open in IMG/M
3300032002\|Ga0307416_102409963	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300032205\|Ga0307472_100964517	Not Available	795	Open in IMG/M
3300033551\|Ga0247830_11388279	Not Available	561	Open in IMG/M
3300034148\|Ga0364927_0201919	Not Available	586	Open in IMG/M
3300034150\|Ga0364933_139072	Not Available	625	Open in IMG/M
3300034661\|Ga0314782_212472	Not Available	507	Open in IMG/M
3300034666\|Ga0314788_208167	Not Available	508	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.31%
Host-Associated	Host-Associated	25.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.39%
Plants	Host-Associated → Plants	25.69%
Aquatic	Environmental → Aquatic	11.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.01%
Sediment	Environmental → Aquatic → Sediment	9.17%
Marine	Environmental → Aquatic → Marine	1.83%
Floodplain	Environmental → Terrestrial → Floodplain	1.83%
Freshwater	Environmental → Aquatic → Freshwater	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.04%
Loam	Environmental → Terrestrial → Soil → Loam	12.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.26%
Sand	Environmental → Terrestrial → Soil → Sand	3.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.75%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.51%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	12.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.34%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.75%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	8.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	2.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.75%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.83%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.92%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011398	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014868	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300025580	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028281	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK30	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034666	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01557590	2088090014	Soil	MYDTSNVRVARENPYIRPLENARRVAGGNEQLAEALRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLKRSAA
INPhiseqgaiiFebDRAFT_1058267204	3300000364	Soil	MYDTSNVRVARENPYIRPLENARRVAGGNEQLAEALRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLKRSAA*
F14TC_1002809281	3300000559	Soil	MYDTSNVRLLRENPYVRQLENARRVAGGDKQLAAALSTSTRALSKWLSGEAPPPMKTYMAAIHLAGRSSLNSFLRR*
soilH2_102039612	3300003324	Sugarcane Root And Bulk Soil	MYDTSNVRVARENPYIRPLENARRVAGGDEQLAEMLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLKRRAA*
Ga0062589_1016336711	3300004156	Soil	MYDTTNVRVARENPYIRPLENARRVAGGDEQLAEALRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLRRRTA*
Ga0062590_1006204842	3300004157	Soil	MYDTSNVRVARENPYIRPLENARRVAGGDEQLASVLRTSTEALSKWLSGETTPPMRTYMAAIHLVGRSSLRRRAA*
Ga0062590_1007052472	3300004157	Soil	MYDTSIVRVARENPYIRPLENARRVAGGDEQLAEALRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLKRRAA*
Ga0062590_1018530551	3300004157	Soil	MELNTHVRIVRENPYVRPLQSARRVAGGDEQLAEALRTSTEALSRWLSGEVRPPMRTYMTAVYLAGR
Ga0063356_1043079601	3300004463	Arabidopsis Thaliana Rhizosphere	RLMRENPYVRPLERARQLAGGEEELAAALRTSTEALSKWLSGELAPPMKTYMVALHLVGRGGVKRQALGL*
Ga0062591_1006757202	3300004643	Soil	MYDTSNVRVARENPYIRPLENARRVAGGDEQLAEVLRISTEALSKWLSGETTPPMRTYMAAIHLVGRSSLR
Ga0062594_1033708592	3300005093	Soil	MHLNPVVRLMRENPYVRPLERARQLAGGEEELAAALRTSTEALSKWLSGELAPPMKTYMVALHLVGRGGVKRQALGL*
Ga0068993_100086234	3300005183	Natural And Restored Wetlands	MYDTSNVRFLRENPYVRQLENARRAAGGDKQLAAALSTSTRVLSKWLSGEAPPPMKTYMAAIHLAGRSTPRSRAA*
Ga0065707_101717631	3300005295	Switchgrass Rhizosphere	MYDTINVRVARENPYIRPLENARRVAGGDEQLAEALRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLRRRAA*
Ga0070676_103970542	3300005328	Miscanthus Rhizosphere	MYDTSIVRVARENPYIRPLENARRVAGGDEQLAEALRTSTEALSKWRSGEATPPMRTYMAAIHLVGRSSLKRRAA*
Ga0066388_1003540012	3300005332	Tropical Forest Soil	MFDTVNIRVQRENPYIRPLENARRVAGGNEQLAAALRTSTEALSSWLSGEAAPPMRTFMAAVHLVGRSSLKSRTA*
Ga0066388_1009673922	3300005332	Tropical Forest Soil	MQDISNVRLMRENPYVRPLETARRVAGGDEKLAEVLRISTETLSRWLSGEVSPPMKSYMAAVHLVGRSALKSRAA*
Ga0066388_1033904132	3300005332	Tropical Forest Soil	MYDTTNVRVARENPYIRPLENARRVAGGDVQLAEVLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLKRRAA*
Ga0070687_1003614812	3300005343	Switchgrass Rhizosphere	MYDTSIVRVARENPYIRPLENARRVAGGDEQLAEALRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLKRRA
Ga0070667_1014201622	3300005367	Switchgrass Rhizosphere	PYIRPLENARRVAGGDEQLAEALRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLKRRAA*
Ga0070709_116197312	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MQDISNVRLMRENPYVRPLETARRVAGGEEKLAEALRISTETLSRWLSGEVSPPMKSYMAAVHLVGRSALKSRAA*
Ga0070711_1003368602	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MQDISNVRLMRENPYVRPLETARRVAGGEEKLAEALRISTETLSRWLSGEVSPPMKSYMAAVHLVGRSSLKARAA*
Ga0070705_1000370151	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MQDISNVRLMRENPYVRPLETARRVAGGDEKLAEVLRISTETLSRWLSGEVSPPMKSYMAAVHLVGRSAIKSRAA*
Ga0070705_1011259172	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDLNTHVRIVRENPYVRPLQSARRVAGGDEQLAEALRTSTEALSRWLSGEVRPPMRTYMTAVYLAGRRNLRSRTS*
Ga0073909_101102862	3300005526	Surface Soil	MYDTSNVRVARENPYIRPLENARRVAGSEEKLAEALRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLRRRAA*
Ga0068853_1004632792	3300005539	Corn Rhizosphere	MYDTSIVRVARENPYIRPLENARRVAGGDEQLAEALRTSTEALSKWLSGEATPPLRTYMAAIHLVGRSSLKRRAA*
Ga0068852_1005316453	3300005616	Corn Rhizosphere	MQDISNVRLMRENPYVRPLETARRVAGGDEKLAEVLRIATETLSRWLSGEVSPPMKSYMAAVHLVGRSSLKSRAA*
Ga0068864_1004437072	3300005618	Switchgrass Rhizosphere	MQDVSNVRLMRENPYVRPLETARRVAGGDEKLAEVLRISTETLSRWLSGEVSPPMKSYMAAVHLVGRSAIKSRAA*
Ga0066905_1001614002	3300005713	Tropical Forest Soil	MFDTVNIRVQRENPYIRPLENARRVAGGDEQLAAALRTSTEALSSWLSGEAAPPMRTFMAAVHLVGRSSLKSRTA*
Ga0066905_1006474531	3300005713	Tropical Forest Soil	MYDNSNVRFMRENPYVRQLENASRVAGGDNQLAAALSTSPTVLSQWLSGEAPPPMRAYMAAIHLAGRSNLKSRAA*
Ga0068861_1008571301	3300005719	Switchgrass Rhizosphere	MRENPYVRPLETARRVAGGDEKLAEVLRISTETLSRWLSGEVSPPMKSYMAAVHLVGRSAIKSRAA*
Ga0068863_1006884112	3300005841	Switchgrass Rhizosphere	MYDTSNVRVARENPYIRPLENARRVVGGSEQLAEALRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLKRRAA*
Ga0068862_1003827163	3300005844	Switchgrass Rhizosphere	RENPYVRPLETARRVAGGDEKLAEVLRISTETLSRWLSGEVSPPMKSYMAAVHLVGRSAIKSRAA*
Ga0075417_104484551	3300006049	Populus Rhizosphere	MFDTSNVRVARENPYIRPLENARRVAGGDVQLAEMLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLKRRAA*
Ga0070716_1015118402	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MQDISNVRLMRENPYVRPLETARRVAGGDEKLAEVLRISTETLSRWLSGEVSPPMKSYMAAVHLVGRSSLKARAA*
Ga0070712_1017013182	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DISNVRLMRENPYVRPLETARRVAGGDEKLAEVLRISTETLSRWLSGEVSPPMKSYMAAVHLVGRSALKSRAA*
Ga0075422_101159791	3300006196	Populus Rhizosphere	YDTSNVRVARENPYIRPLERARRVAGGDEQLAEMLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLKRRAA*
Ga0074051_114617061	3300006572	Soil	MYDTSIVRVARENPYIRPLENARRVAGGDEKLAEVLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRNSLRRRAA*
Ga0074048_127488412	3300006581	Soil	MYDTSNVRVARENPYIRPLENARRVAGGDEKLAEMLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLRRRAA*
Ga0075431_1017489882	3300006847	Populus Rhizosphere	MNDTVNIRVMRENPYIRPLENARRVAGGDEQLAAALRISTEALSSWLSGEAPPPMRTFMAAVHLAG
Ga0079217_100014238	3300006876	Agricultural Soil	MYETVIRVMRENPYVRPLEHARRVAGGDEQLAAALRTSTEALSKWLSGESSPPMRTYMAALHLVGRSSRIRPVR*
Ga0079216_108171052	3300006918	Agricultural Soil	MYENVNVRIMRENPYVRPLELARRVAGGDEQLAAALQTSTEVLSTWLSGEAPPPMKTYMAALNLVARGNGKSHTPIQKTNGQS
Ga0079218_109242231	3300007004	Agricultural Soil	MQDNIVRFTRQNPYARPLENAIRAAGGDKQLAAALRISKKTLASWLAGEAPPPMKTYMAAMHLVGRSSLNSLRR*
Ga0079218_134544241	3300007004	Agricultural Soil	MYENVNVRIMRENPYVRPLELARRVAGGDEQLAAALQTSTELLSTWLSGEAPPPMKTYMAALNLVARGNGKSHTPIQKTNGQSAH
Ga0099791_106844282	3300007255	Vadose Zone Soil	MYDTSNVRVARENPYIRPLENARRVAGGDEQLAEMLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLRRR
Ga0066710_1021393721	3300009012	Grasslands Soil	MHDNSTVRIMRESPYVRQLEHAKRVAGGDKQLAAALSTSTKVLSKWLSAEAPPPMRTYMAALHLAGRTSLRSRTS
Ga0111538_108108032	3300009156	Populus Rhizosphere	MYDTSNVRVARENPYIRPLERARRVAGGDEQLAEMLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLKGRAA*
Ga0111538_113395591	3300009156	Populus Rhizosphere	MFDTSNVRVARENPYIRPLENARRVAGGDVQLAEMLRTSTEALSTWLSGEATPPMRTYMAAIHLVGRSSLKRRAA*
Ga0075423_120783401	3300009162	Populus Rhizosphere	MYDTSIVRVARENPYIRPLENARRVAGGDEQLAEALRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLRRRAA*
Ga0105347_12723011	3300009609	Soil	MYDNSNVRLMRENPYVRQLENALRVAGGDKELAAALSTSRRALSKWLSGETPPPMKTYMTAVHLAGRSSLKSRTT*
Ga0105340_10367373	3300009610	Soil	MYDTSNVRLLRENPYVRQLENARRVAGGDKQLAAALSTSTRALSKWLSGEAPPPMRTYMAAIHFAGRSSLKSRTA*
Ga0105252_102839771	3300009678	Soil	MYDNSNVRLMRENPYVRQLENALRVAGGDKELAAALSTSRRALSKWLSGEAPPPMKTYMTAVHLAGRSSLKSRTT*
Ga0105084_10812112	3300009811	Groundwater Sand	MYDTSNVRLLRENPYVRQLENARRVAGGEKQLAAALSTSTRALSKWLSGEAPPPMRTYMAAIHFAGRSSLKSR
Ga0126319_13747542	3300010147	Soil	PYVRPLENARRVAGGEEQLAEVLRISTETLSRWLSGEVSPPMKSYMAAIHLVGRSSMRSRAA*
Ga0126372_127702441	3300010360	Tropical Forest Soil	MQDISNVRLMRENPYVRPLETARRVAGGDEKLAEVLRISTETLSRWLSGEVSPPMKSYMAAVHLVGRSSLKSRAA*
Ga0134124_110537842	3300010397	Terrestrial Soil	MYDTSNVRVARENPYIRPLENARRVAGGDEQLAEVLRISTEALSKWLSGETTPPMRTYMAAIHLVGRSSLRRRAA*
Ga0134127_116392012	3300010399	Terrestrial Soil	VEEAAMYDHSTVRLMRESPYVRQLENARRAAGGDEKLAAALSTSQKALSTWLSGEVPPPMKTYMTAVHLAGRNSFRSRTA*
Ga0134122_100012528	3300010400	Terrestrial Soil	MYDTSIVRVARENPYIRPLENARRVAGGDEQLAEALLTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLKRRAA*
Ga0134122_106603382	3300010400	Terrestrial Soil	MDLNTHVRIVRENPYVRPLQSARRVAGGDEQLAEALRTSTEALSRWLSGEARPPMRTYMTAVYLAGRRNLRSRTS*
Ga0134123_106976891	3300010403	Terrestrial Soil	DISNVRLMRENPYVRPLETARRVAGGDEKLAEVLRISTETLSRWLSGEVSPPMKSYMAAVHLVGRSAIKSRAA*
Ga0137348_10669971	3300011398	Soil	PYVRQLENARRVAGGDKQLAAALSTSTRALSKWLSGEAPPPMRTYMAAIHFAGRSSLKSRTA*
Ga0137432_10088701	3300011439	Soil	MYDNSNVRLMRENPYVRQLENALRAAGGDKELAAALSTSRRALSKWLSGEAPPPMKTYMTAVHLAGRSSLKSRTT*
Ga0137432_11013492	3300011439	Soil	MYDTSNVRLLRENPYVRQLENARRVAGGEKQLAAALSTSTRALSKWLSGEAPPPMRTYMAAIHFAGRSSLKSRTA*
Ga0137437_10095032	3300011442	Soil	MYDTSIVRVARENPYIRPLENARRVAGGDEQLAEVLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLRRRAA*
Ga0150985_1141232131	3300012212	Avena Fatua Rhizosphere	RREAPMYDTTNVRVARENPYIRPLENARRVAGGDEQLAEVLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLRRRTA*
Ga0150984_1100021421	3300012469	Avena Fatua Rhizosphere	MEKLGKMRAPMYDTTNVRVARENPYIRPLENARRVAGGDEQLAEVLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLRRRTA*
Ga0164304_108898631	3300012986	Soil	MYDTSIVRVARENPYIRPLENARRVAGGDEQLAEALRTSTEALSKWLSGEATPPMRTYMAAIHLVGRGSLKRRAA*
Ga0157377_103727841	3300014745	Miscanthus Rhizosphere	MYDTSIVRVARENPYIRPLENARRVAGGDEQLAEALRTSTEALSKWLSGEATPPMRTYMAAIHLDGRSSLKRRAA*
Ga0180088_10291712	3300014868	Soil	MYDNSNVRLMRENPYVRQLENALRAAGGDKELAAALSTSRRALSKWLSGETPPPMKTYMTAVHLAGRSSLKSRTT*
Ga0132258_124685321	3300015371	Arabidopsis Rhizosphere	MQDISNVRLMRENPYVRPLETARRVAGGDEKLAEVLRISTETLSRWLSGEGSPPMKSYMAAVHLVGRSAIKSRAA*
Ga0132257_1032113882	3300015373	Arabidopsis Rhizosphere	MFDTSIVRVARENPYIRPLENARRVAGGDVQLAEMLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLKRRAA*
Ga0184628_100371652	3300018083	Groundwater Sediment	MYDTSIVRVARENPYIRPLENARRVAGGDEQLAEVLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLRRRAA
Ga0190265_107437062	3300018422	Soil	MYQNVVYVMRENPYVRPLEHAMRVAGGDEQLAAALHTSTEALSRWLSGESSPPMKTYMAALHLVGRNSLKSRTA
Ga0190265_111458781	3300018422	Soil	MYENVVRIMRENPYVRPLEHARRVAGGEEQLASALHTSADALSKWLSGESAPPMRTYMAALHLVGRSSRKSRTA
Ga0196964_102049362	3300020202	Soil	MHPYVTVRLMRENPYVRPLERAKQLAGGDEELAAALSTSKEALSKWLSGEVPPPMKTYMAAVKLVGRSALKRASTSF
Ga0196964_103132851	3300020202	Soil	MHQNRSVRFLRENPYLRPLETARRIAGGDEELAAMLRISTETLSQWLSGEAAPPMKSYMAAVHLVGRSSLRNRGQSPI
Ga0196963_101950822	3300020215	Soil	MQQHVTVRLMRENPYVRPLERAKQLAGGDEELAAALSTSKEALSKWLSGEVPPPMKTYMAAVKLVGRSALKRV
Ga0210138_10421271	3300025580	Natural And Restored Wetlands	MYDTSNVRFLRENPYVRQLENARRAAGGDKQLAAALSTSTRVLSKWLSGEAPPPMKTYMAAIHLAGRSTPRSRAA
Ga0207642_110714571	3300025899	Miscanthus Rhizosphere	MQDISNVRLMRENPYVRPLESARRVAGSEEKLAEVLRISTETLSRWLSGEVSPPMKSYMAAVHLVGRSAIKSRAA
Ga0207663_112934501	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	EEREAAMQDISNVRLMRENPYVRPLETARRVAGGEEKLAEALRISTETLSRWLSGEVSPPMKSYMAAVHLVGRSSLKARAA
Ga0207639_107315761	3300026041	Corn Rhizosphere	MYDTSIVRVARENPYIRPLENARRVAGGDEQLAEALRTSTEALSKWLSGEATPPLRTYMAAIHLVGRSSLKRRAA
Ga0207641_108676252	3300026088	Switchgrass Rhizosphere	VRVARENPYIRLLENARRVVGGSEQLAEALRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLKRRAA
Ga0207641_118650832	3300026088	Switchgrass Rhizosphere	NPYVRPLETARRVAGGDEKLAEVLRISTETLSRWLSGEVSPPMKSYMAAVHLVGRSAIKSRAA
Ga0207676_100490483	3300026095	Switchgrass Rhizosphere	MQDVSNVRLMRENPYVRPLETARRVAGGDEKLAEVLRISTETLSRWLSGEVSPPMKSYMAAVHLVGRSAIKSRAA
Ga0208185_10591951	3300027533	Soil	LLRENPYVRQLENARRVAGGDKQLAAALSTSTRALSKWLSGEAPPPMRTYMAAIHFAGRSSLKSRTA
Ga0209811_100223683	3300027821	Surface Soil	MYDTSNVRVARENPYIRPLENARRVAGSEEKLAEALRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLRRRAA
Ga0209814_103247521	3300027873	Populus Rhizosphere	MFDTSNVRVARENPYIRPLENARRVAGGDVQLAEMLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLKRRAA
Ga0209486_101109722	3300027886	Agricultural Soil	MYETVIRVMRENPYVRPLEHARRVAGGDEQLAAALRTSTEALSKWLSGESSPPMRTYMAALHLVGRSSRIRPVR
Ga0209486_103597902	3300027886	Agricultural Soil	MQDNIVRFTRQNPYARPLENAIRAAGGDKQLAAALRISKKTLASWLAGEAPPPMKTYMAAMHLVGRSSLNSLRR
Ga0209486_110913941	3300027886	Agricultural Soil	MYENVNVRIMRENPYVRPLELARRVAGGDEQLAAALQTSTELLSTWLSGEAPPPMKTYMAALNLVARGNGKSHTPIQKTNGQSAHAG
Ga0247689_10006651	3300028281	Soil	VRLMRENPYVRPLETARRVAGGDEKLAEVLRISTETLSRWLSGEVSPPMKSYMAAVHLVGRSAIKSRAA
Ga0268265_104854403	3300028380	Switchgrass Rhizosphere	MRENPYVRPLETARRVAGGDEKLAEVLRISTETLSRWLSGEVSPPMKSYMAAVHLVGRSAIKSRAA
Ga0247824_111141631	3300028809	Soil	MYDTSNVRFLRENPYVRQLENARRAAGGDKQLAAALSTSTRVLSKWLSGEAPPPMKTYMAAIHLAGRSTLRSRAA
Ga0299907_101484932	3300030006	Soil	MYQNVVRVMRENPYVRPLEHARRVAGGDEQLAAALHISTEALSRWLSGESSPPMRTYMDALHLVGRNSLRSRTA
Ga0307500_100044292	3300031198	Soil	MYDTSNVRVARENPYIRPLENARRVAGGDEKLAEVLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLRRRAA
Ga0307495_101315652	3300031199	Soil	MQDNINVRLMRENPYVRPLENARRVAGGEEQLAEVLRISTETLSRWLSGEVSPPMKSYMAAIHLVGRSSMRSRAA
Ga0310888_102347712	3300031538	Soil	MFDTSIVRVARENPYIRPLENARRVAGGDVQLAEMLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLKRRAA
Ga0307469_102965683	3300031720	Hardwood Forest Soil	MYDTSIVRVARENPYIRPLENARRVAGGDVQLAEALRISTEALSKWLSGEATPPMRTYMAAIHFAGRSSLRRRAA
Ga0307468_1000466202	3300031740	Hardwood Forest Soil	MYDTSNVRVARENPYIRPLERAIRVAGGDEQLAEMLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLRRRAA
Ga0307468_1009481411	3300031740	Hardwood Forest Soil	MYDTSNVRVARENPYIRPLENARRVAGGDVQLAEMLRTSTEALSKWLSGEATPPMRTYMAAIHLVGRSSLRRRAA
Ga0307468_1014523232	3300031740	Hardwood Forest Soil	MYDTSNVRLLRENPYVRQLENARRVAGGDKQLAAALSTSTRALSKWLSGEAPPPMRTYMAAIHFAGRSSLKSRTA
Ga0310904_108164611	3300031854	Soil	MFDTSIVRVARENPYIRPLENARRVVGGSEQLAEALRTSTEALSKWLSGEATPPMLTYMAAIHLVGRSSLKRRA
Ga0310904_114403221	3300031854	Soil	MYDNSSVRLMRENPYVRQLENARRVAGGDKQLAQALSTSTKALSKWLSGEAPPPMKTYMAAIHLAGRSSLKSRAA
Ga0307416_1024099632	3300032002	Rhizosphere	MNEIVNIRVLRENPYIPPLENARRVAGGDEQLAAALRISTAALSSWLSGEASPPMRTFMAAVHLAGRSSLRSRAA
Ga0307472_1009645172	3300032205	Hardwood Forest Soil	IVRVARENPYIRPLENARRVAGGDVQLAEALRISTEALSKWLSGETTPPMRTYMAAIHFAGRSSLRRRAA
Ga0247830_113882792	3300033551	Soil	MYDTSNVRFLRENPYVRQLENARRAAGGDKQLAAALSTSTRVLSKWLSGEAPPPMKTYMAAIHL
Ga0364927_0201919_131_358	3300034148	Sediment	MYDNSNVRLMRENPYVRQLENALRAAGGDKELAAALSTSRRALSKWLSGETPPPMKTYMTAVHLAGRSSLKSRTT
Ga0364933_139072_2_196	3300034150	Sediment	MYDTSIVRVARENPYIRPLENARRVAGGDEQLAEVLRTSTEALSKWLSGEATPPMRTYMAAIHLV
Ga0314782_212472_2_229	3300034661	Soil	MYDTSNVRVARENPYIRPLENARRVAGSEEKLAEALRTSTEALSKWLSGEATPPMRTYMAAIHLVGRNSLRRRAA
Ga0314788_208167_298_507	3300034666	Soil	VRVARENPYIRPLENARRVAGGDEQLASVQRTSTEALSKCLSGETTPPMRTYMAAIHLVGRSSLRRRAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089312

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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