Metagenome / Metatranscriptome Family F089336

Basic Information
Family ID	F089336
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	45 residues
Representative Sequence	VPVTLNQTGIRSFCSFEDAVVRVQPTGAAIASEAACQALLPLNQ
Number of Associated Samples	91
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.17 %
% of genes from short scaffolds (< 2000 bps)	84.40 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Most Common Taxonomy
Group	Bacteria (66.972 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds (17.431 % of family members)
Environment Ontology (ENVO)	Unclassified (23.853 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.624 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.50% β-sheet: 2.78% Coil/Unstructured: 84.72%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF07963	N_methyl	23.85
PF13544	Obsolete Pfam Family	13.76
PF13633	Obsolete Pfam Family	6.42
PF02954	HTH_8	3.67
PF00005	ABC_tran	3.67
PF00795	CN_hydrolase	2.75
PF13424	TPR_12	1.83
PF00072	Response_reg	0.92
PF00196	GerE	0.92
PF13432	TPR_16	0.92
PF13426	PAS_9	0.92
PF05717	TnpB_IS66	0.92
PF07859	Abhydrolase_3	0.92
PF02540	NAD_synthase	0.92
PF04107	GCS2	0.92
PF00654	Voltage_CLC	0.92
PF02321	OEP	0.92
PF00574	CLP_protease	0.92
PF10017	Methyltransf_33	0.92
PF06739	SBBP	0.92
PF14537	Cytochrom_c3_2	0.92
PF13676	TIR_2	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.83
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	1.83
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.83
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.92
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.92
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.92
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.89 %
Unclassified	root	N/A	32.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.89 %
Unclassified	root	N/A	32.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.97 %
Unclassified	root	N/A	32.11 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	55.96 %
Unclassified	root	N/A	32.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.83 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	19.27 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	19.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	19.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	10.09 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	3.67 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.92 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.34 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3.67 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.34 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3.67 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.92 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.34 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3.67 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.92 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.34 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3.67 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.92 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.34 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3.67 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.92 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.34 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3.67 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.92 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.34 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3.67 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.92 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.34 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3.67 %
asterids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids	0.92 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.34 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3.67 %
campanulids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids	0.92 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.34 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3.67 %
Asterales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales	0.92 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.34 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3.67 %
Asteraceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae	0.92 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.34 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3.67 %
Asteroideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae	0.92 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.34 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3.67 %
Anthemideae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae	0.92 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.34 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3.67 %
Anthemidinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae	0.92 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.34 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3.67 %
Tanacetum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum	0.92 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7.34 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	3.67 %
Tanacetum cinerariifolium	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	0.92 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y01BU51Y	Not Available	651	Open in IMG/M
3300000567\|JGI12270J11330_10054515	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300000567\|JGI12270J11330_10075768	All Organisms → cellular organisms → Bacteria → Acidobacteria	1625	Open in IMG/M
3300000567\|JGI12270J11330_10194206	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300002568\|C688J35102_118893706	Not Available	610	Open in IMG/M
3300004082\|Ga0062384_100391929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300004635\|Ga0062388_102677246	Not Available	525	Open in IMG/M
3300005434\|Ga0070709_10814268	Not Available	734	Open in IMG/M
3300005435\|Ga0070714_101260726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300005435\|Ga0070714_102422124	Not Available	510	Open in IMG/M
3300005468\|Ga0070707_101729166	Not Available	593	Open in IMG/M
3300005529\|Ga0070741_10100906	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3064	Open in IMG/M
3300005529\|Ga0070741_11129813	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	664	Open in IMG/M
3300005533\|Ga0070734_10301796	Not Available	916	Open in IMG/M
3300005542\|Ga0070732_10470399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300005591\|Ga0070761_10364473	Not Available	877	Open in IMG/M
3300005712\|Ga0070764_10622690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300005995\|Ga0066790_10275436	Not Available	717	Open in IMG/M
3300006047\|Ga0075024_100193424	All Organisms → cellular organisms → Bacteria → Acidobacteria	950	Open in IMG/M
3300006047\|Ga0075024_100318530	All Organisms → cellular organisms → Bacteria → Acidobacteria	768	Open in IMG/M
3300006050\|Ga0075028_100305107	All Organisms → cellular organisms → Bacteria → Acidobacteria	888	Open in IMG/M
3300006050\|Ga0075028_100314191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300006052\|Ga0075029_100024702	All Organisms → cellular organisms → Bacteria	3383	Open in IMG/M
3300006052\|Ga0075029_100660242	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300006059\|Ga0075017_100046727	All Organisms → cellular organisms → Bacteria	2896	Open in IMG/M
3300006059\|Ga0075017_100199888	All Organisms → cellular organisms → Bacteria → Acidobacteria	1445	Open in IMG/M
3300006086\|Ga0075019_10024608	All Organisms → cellular organisms → Bacteria	3370	Open in IMG/M
3300006102\|Ga0075015_100503403	Not Available	698	Open in IMG/M
3300006162\|Ga0075030_100760637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	766	Open in IMG/M
3300006162\|Ga0075030_101342643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	560	Open in IMG/M
3300006162\|Ga0075030_101526639	Not Available	523	Open in IMG/M
3300006173\|Ga0070716_100633179	Not Available	809	Open in IMG/M
3300006173\|Ga0070716_101214289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300006174\|Ga0075014_100521667	Not Available	668	Open in IMG/M
3300006175\|Ga0070712_101543421	Not Available	581	Open in IMG/M
3300006176\|Ga0070765_100193477	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1842	Open in IMG/M
3300006804\|Ga0079221_11467326	Not Available	546	Open in IMG/M
3300006893\|Ga0073928_10003403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	25224	Open in IMG/M
3300006954\|Ga0079219_10473255	All Organisms → cellular organisms → Bacteria → Acidobacteria	865	Open in IMG/M
3300009521\|Ga0116222_1196632	Not Available	868	Open in IMG/M
3300009522\|Ga0116218_1190545	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300009545\|Ga0105237_12667544	Not Available	510	Open in IMG/M
3300009672\|Ga0116215_1203358	All Organisms → cellular organisms → Bacteria → Acidobacteria	872	Open in IMG/M
3300009700\|Ga0116217_10351617	All Organisms → cellular organisms → Bacteria → Acidobacteria	940	Open in IMG/M
3300009824\|Ga0116219_10186735	All Organisms → cellular organisms → Bacteria → Acidobacteria	1189	Open in IMG/M
3300010341\|Ga0074045_10093469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2088	Open in IMG/M
3300010376\|Ga0126381_103092079	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	659	Open in IMG/M
3300012189\|Ga0137388_11196334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300012354\|Ga0137366_10081606	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2459	Open in IMG/M
3300012961\|Ga0164302_10435341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300013105\|Ga0157369_10419568	All Organisms → cellular organisms → Bacteria → Acidobacteria	1387	Open in IMG/M
3300014158\|Ga0181521_10004288	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16363	Open in IMG/M
3300014498\|Ga0182019_10083745	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1920	Open in IMG/M
3300015195\|Ga0167658_1083069	Not Available	721	Open in IMG/M
3300016270\|Ga0182036_11348848	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300016357\|Ga0182032_11342911	Not Available	618	Open in IMG/M
3300017823\|Ga0187818_10127815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1103	Open in IMG/M
3300017823\|Ga0187818_10492280	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300017934\|Ga0187803_10009246	All Organisms → cellular organisms → Bacteria → Proteobacteria	3934	Open in IMG/M
3300017934\|Ga0187803_10195950	All Organisms → cellular organisms → Bacteria → Acidobacteria	796	Open in IMG/M
3300017936\|Ga0187821_10374301	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300017955\|Ga0187817_10117332	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300017993\|Ga0187823_10232623	Not Available	617	Open in IMG/M
3300018088\|Ga0187771_10195578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1677	Open in IMG/M
3300018088\|Ga0187771_11739844	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	529	Open in IMG/M
3300018090\|Ga0187770_11418206	Not Available	564	Open in IMG/M
3300018468\|Ga0066662_11326243	Not Available	739	Open in IMG/M
3300020580\|Ga0210403_10758290	All Organisms → cellular organisms → Bacteria → Acidobacteria	774	Open in IMG/M
3300021181\|Ga0210388_11799959	Not Available	504	Open in IMG/M
3300021478\|Ga0210402_11551103	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300021559\|Ga0210409_10456225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	1139	Open in IMG/M
3300025494\|Ga0207928_1000395	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6209	Open in IMG/M
3300025509\|Ga0208848_1040108	Not Available	1010	Open in IMG/M
3300025898\|Ga0207692_10578830	Not Available	720	Open in IMG/M
3300025916\|Ga0207663_10944099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300025929\|Ga0207664_11192844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300026291\|Ga0209890_10038141	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1811	Open in IMG/M
3300027034\|Ga0209730_1008322	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300027063\|Ga0207762_1023962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	964	Open in IMG/M
3300027575\|Ga0209525_1041035	Not Available	1136	Open in IMG/M
3300027641\|Ga0208827_1181375	Not Available	568	Open in IMG/M
3300027842\|Ga0209580_10667949	Not Available	514	Open in IMG/M
3300027853\|Ga0209274_10229066	Not Available	949	Open in IMG/M
3300027854\|Ga0209517_10537451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300027889\|Ga0209380_10047089	All Organisms → cellular organisms → Bacteria	2447	Open in IMG/M
3300027894\|Ga0209068_10410576	All Organisms → cellular organisms → Bacteria → Acidobacteria	773	Open in IMG/M
3300027908\|Ga0209006_10080657	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2895	Open in IMG/M
3300027908\|Ga0209006_10145672	All Organisms → cellular organisms → Bacteria → Acidobacteria	2080	Open in IMG/M
3300027908\|Ga0209006_10749342	All Organisms → cellular organisms → Bacteria → Acidobacteria	796	Open in IMG/M
3300027910\|Ga0209583_10264661	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	765	Open in IMG/M
3300027911\|Ga0209698_10012689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8350	Open in IMG/M
3300027911\|Ga0209698_10567834	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	874	Open in IMG/M
3300027911\|Ga0209698_11171997	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300028800\|Ga0265338_10260342	Not Available	1276	Open in IMG/M
3300028906\|Ga0308309_11487397	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300030503\|Ga0311370_10199845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2690	Open in IMG/M
3300030659\|Ga0316363_10329089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300030923\|Ga0138296_1090807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300031234\|Ga0302325_10957094	Not Available	1178	Open in IMG/M
3300031249\|Ga0265339_10604847	Not Available	502	Open in IMG/M
3300031715\|Ga0307476_10329423	Not Available	1122	Open in IMG/M
3300031753\|Ga0307477_10485795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300031941\|Ga0310912_11255092	Not Available	563	Open in IMG/M
3300031954\|Ga0306926_12063287	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300032180\|Ga0307471_103958768	Not Available	523	Open in IMG/M
3300032828\|Ga0335080_11018810	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M
3300032829\|Ga0335070_11966859	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300033134\|Ga0335073_10093495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3900	Open in IMG/M
3300033402\|Ga0326728_10265569	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1613	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.41%
Host-Associated	Host-Associated	3.67%
Engineered	Engineered	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.89%
Aquatic	Environmental → Aquatic	27.52%
Plants	Host-Associated → Plants	3.67%
Solid Waste	Engineered → Solid Waste	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.14%
Sediment	Environmental → Aquatic → Sediment	17.43%
Freshwater	Environmental → Aquatic → Freshwater	9.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.67%
Peat	Environmental → Terrestrial → Peat	2.75%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.92%
Grass	Engineered → Solid Waste → Grass	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.86%
Loam	Environmental → Terrestrial → Soil → Loam	21.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	17.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.83%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.92%
Composting	Engineered → Solid Waste → Grass → Composting	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	17.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.17%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.75%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.83%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	17.43%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.09%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.50%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.75%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.92%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.92%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.92%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.92%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025494	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089336

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_04006360	2170459021	Switchgrass, Maize And Mischanthus Litter	QTGNRSFCSYEDAVVRVNPAGAVVAGVAACQALNPLNQ
JGI12270J11330_100545151	3300000567	Peatlands Soil	YYATAAPVTLNQTGIRSFCSFEDAVVRVDPTGTVAGSEAACQALLPLNQ*
JGI12270J11330_100757684	3300000567	Peatlands Soil	SYYANGKPVTLNQTGIRAFCSFEDAVVRVDPAGAGATTVATCQAFLPLNQ*
JGI12270J11330_101942061	3300000567	Peatlands Soil	PVTLNQTGTMSFCSFEDAVVRVDPTGALPGSEAACQALMPMYN*
C688J35102_1188937061	3300002568	Soil	NQTGIRSFCSVEDAVIRADPAGSTVTSGAGCEAFPPLNQ*
Ga0062384_1003919292	3300004082	Bog Forest Soil	NQTGIRSFCSFEDAVVRVQPSGAAIASEAACQALLPLNQ*
Ga0062388_1026772461	3300004635	Bog Forest Soil	NQTGIRSFCSFEDAVVRVQPTGAAIGAETACQALLPLNQ*
Ga0070709_108142681	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	HPVTVNQTGIRSFCSFADAVVRVDPAGGTVASVAACQALLPLNQ*
Ga0070714_1012607261	3300005435	Agricultural Soil	AGVAGTPSVSYYANAKPVTLNQTGIRAFCSFEDAVVRVDPAGVGATSVATCQAFLPLNQ*
Ga0070714_1024221242	3300005435	Agricultural Soil	YAEGHPVSVNQTGIRSFCSVEDAVIRADPAGSTVTSGAGCEAFSPLNQ*
Ga0070707_1017291661	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	SSQYYMTAIPVTINQTGIRSFCSFEDAVIRVQPTGAGIGSEAACQALLPLNQ*
Ga0070741_101009061	3300005529	Surface Soil	NTNYYATGTPITVNQTGIRSFCAYEDAVVRVDPTGAVAGGYGACQALNPLNQ*
Ga0070741_111298131	3300005529	Surface Soil	NTNYYATGTPITVNQTGIRSFCAYEDAVVRVDPTGAVAGGRGACQALNPLNQ*
Ga0070734_103017961	3300005533	Surface Soil	RSFCAFEDAVVRVQPTGAAIGAESTCQGLLPLNQ*
Ga0070732_104703991	3300005542	Surface Soil	YFATAVPVTLNQTGIRSFCSFEDAVVRVQPSGAAIASEGACQALLPLNQ*
Ga0070761_103644732	3300005591	Soil	RSFCSFEDAVVRVQPAGGNIASEAACQALSPLNQ*
Ga0070764_106226903	3300005712	Soil	VTLNQTGIRSFCAFEDAVVRVQPTGAAIGAESTCQALLPLNQ*
Ga0066790_102754361	3300005995	Soil	LNQTGIRAFCSYADAVVRVQPAGTVVATVAACQVLSTI*
Ga0075024_1001934241	3300006047	Watersheds	QTGVRAFCSFEDAVVRADPAGVGGTTPPLCGAFTPL*
Ga0075024_1003185302	3300006047	Watersheds	YTANGKPVTANQTGVRAFCSFEDAVVRVDPAGAGGTTVAACAAFTPL*
Ga0075028_1003051072	3300006050	Watersheds	FTTYTANGTPVTPNQTGVRAFCSFEDAVVRADPAGVGGITKALCGAFTPL*
Ga0075028_1003141911	3300006050	Watersheds	FTTYTANGTPVTPNQTGVRAFCSFEDAVVRADPAGVGGITAALCGAFTPL*
Ga0075029_1000247021	3300006052	Watersheds	QTGIRSFCSFEDAVIRVQPAGGGIGSEATCQGLLPLNQ*
Ga0075029_1006602421	3300006052	Watersheds	YYAAGTPVTLNQTGNRSFCSFEDAVVRVDPAGGAVGTEATCQGLSPLNQ*
Ga0075017_1000467274	3300006059	Watersheds	IRSFCSFEDAVIRVQPAGGGIGSEATCQGLLPLNQ*
Ga0075017_1001998881	3300006059	Watersheds	PVTLNQTGIRAFCSFTDAVVRVDPAGAGATSVATCQAFLPLNQ*
Ga0075019_100246084	3300006086	Watersheds	RSFCSFEDAVIRVQPAGGGIGSEATCQGLLPLNQ*
Ga0075015_1005034031	3300006102	Watersheds	ISYYANGKPVTLNQTGIRAFCSFTDAVVRVDPAGAGATSVATCQAFLPLNQ*
Ga0075030_1007606371	3300006162	Watersheds	PVTLNQTGIRSFCSFEDAVVRVQPTGAAIASEAACQSLLPLNQ*
Ga0075030_1013426432	3300006162	Watersheds	YYATAVPVTVNQTGIRSFCAFEDAVVRVDPTGAVAASEAACQALAPLNQ*
Ga0075030_1015266391	3300006162	Watersheds	NQTGIRSFCSFEDAVVRVQPTGAAIASENACMALLPLNQ*
Ga0070716_1006331792	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	SGYLFTATAIAATPSVSYVAAGKPVTLNQTGIRAFCSFEDAVVRVDPTGAGVTTVTGCQGLLPLNQ*
Ga0070716_1012142891	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GVRSFCSFEDGTVRVDTTGGAIASHAACVALPGMQ*
Ga0075014_1005216671	3300006174	Watersheds	VPVTLNQTGIRSFCSFEDAVVRVQPTGAAIASEAACQTLLPLNQ*
Ga0070712_1015434211	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	QTGIRSFCSVEDAVIRSDAAGSTVSSVAGCQAFPPLNQ*
Ga0070765_1001934771	3300006176	Soil	QTGIRSFCSFEDAVVRVQPTGAAIASEAACQALLPLNQ*
Ga0079221_114673261	3300006804	Agricultural Soil	SYYANAKPVTLNQTGIRAFCSFEDAVVRVDPAGVGATSVATCQAFLPLNQ*
Ga0073928_100034031	3300006893	Iron-Sulfur Acid Spring	NGKPVTLNQTGIRAFCSFEDAVVRADPAGVGATTAATCAAFTPLN*
Ga0079219_104732551	3300006954	Agricultural Soil	VTLNQTGIRRFCSFEDAVVRVQPTGAAVAAESACQALLPLNQ*
Ga0116222_11966322	3300009521	Peatlands Soil	TFTAAAVAGTPSVSYYANGKPVTLNQTGIRAFCSFEDAVVRVDPAGAGATTVATCQAFLPLNQ*
Ga0116218_11905451	3300009522	Peatlands Soil	LNQTGIRSFCSFEDAVVRVDPTGTVAGSEAACQALLPLNQ*
Ga0105237_126675441	3300009545	Corn Rhizosphere	NQTGIRSFCSVEDAVIRTDPAGSTVTSGAGCEAFPPLNQ*
Ga0116215_12033581	3300009672	Peatlands Soil	AVAGTPSVSYYANGKPVTLNQTGIRAFCSFEDAVVRVDPAGAGATTVATCQAFLPLNQ*
Ga0116217_103516172	3300009700	Peatlands Soil	SVSYYANGKPVTLNQTGIRAFCSFEDAVVRVDPAGAGATTVATCQAFLPLNQ*
Ga0116219_101867351	3300009824	Peatlands Soil	GKPVTLNQTGIRAFCSFEDAVVRVDPAGAGATTVATCQAFLPLNQ*
Ga0074045_100934691	3300010341	Bog Forest Soil	ATIYYATASPVTPNQTGIRGFCSFEDAVVRVQPVGAALASESACQALAPLNQ*
Ga0126381_1030920792	3300010376	Tropical Forest Soil	PTTPSQTGVRTFCAYEDAVVRVDPTGSAIASETACQALLPLNQ*
Ga0137388_111963341	3300012189	Vadose Zone Soil	PITLNQTGIRSFCAFEDAVVRVQPTGAAIASEAACQALLPLNQ*
Ga0137366_100816061	3300012354	Vadose Zone Soil	EASGVPVTVNQTGIRSFCSYEDGVVRVQPTGAAIATVAACQALSPL*
Ga0164302_104353411	3300012961	Soil	QTGNRSFCSFEDAVVRTDPAGAVVAGQPACAALNPLHQ*
Ga0157369_104195681	3300013105	Corn Rhizosphere	YAEGHPVSVNQTGIRSFCSVEDAVIRSDAAGSTVSSVAGCQAFPPLNQ*
Ga0181521_1000428819	3300014158	Bog	LNQTGTRSFCAFEDAVVRVQPTGAAIASEAACQALLPLNQ*
Ga0182019_100837451	3300014498	Fen	TANGKPVTLHQTGNRAFCSFEDAVLRVDPAGVGGITAAACAAFLPLNQ*
Ga0167658_10830692	3300015195	Glacier Forefield Soil	VNQTGIRSFCAFEDAVVRVQPTGAAIASEAACMAFLPLNQ*
Ga0182036_113488481	3300016270	Soil	KPITVNQTGLRSFCSFEDAVVRVQPTGAAIGSYAACQALTPLNQ
Ga0182032_113429112	3300016357	Soil	PITVNQTGIRSFCSIDDAVVRVQPSGAPIGTPFACASLSPLNQ
Ga0187818_101278151	3300017823	Freshwater Sediment	PGVAAVPQTTYYATAVPVTLNQTGIRSFCSFEDAVVRVNPAGTLPGSEGACQALLPLNQ
Ga0187818_104922801	3300017823	Freshwater Sediment	ATPVTLNQTGTMSFCSFEDAVVRVDPTGALAGSEAACQALTPMYN
Ga0187803_100092466	3300017934	Freshwater Sediment	PATKYYSTAVPITLNQTGIRSFCSFEDAVVRVQPTGAAIASEAACQALLPLNQ
Ga0187803_101959501	3300017934	Freshwater Sediment	VPVTLNQTGIRSFCSFEDAVVRVQPTGAAIASEAACQALLPLNQ
Ga0187821_103743012	3300017936	Freshwater Sediment	YWARALPITLQQSGLRSFCSFEDGVVLVQPNGAPISSEAACQALQPLNP
Ga0187817_101173321	3300017955	Freshwater Sediment	TPNQTGIRSFCSFEDAVLRVNPAGTLPGSEGACQALLPLNQ
Ga0187823_102326231	3300017993	Freshwater Sediment	IVTYYANAKPVTLNQTGIRAFCSFEDAVVRVDPTGAGISSVATCQALLPLNQ
Ga0187771_101955781	3300018088	Tropical Peatland	TAVPVTPNQTGIRSFCSYEDAVVRVDPTGALPAAEANCQALLPLNQ
Ga0187771_117398441	3300018088	Tropical Peatland	LNQTGTRSFCSFEDAVVRVQPTGAAIASEAACQALLPLNQ
Ga0187770_114182061	3300018090	Tropical Peatland	VPVTVNQTGIRSFCSFEDAVIRVQPTGGAIASEAACQALLPLNQ
Ga0066662_113262431	3300018468	Grasslands Soil	TGVRSFCSFEDATIRVQPTGAGIPSEAACQALLPLNQ
Ga0210403_107582901	3300020580	Soil	TPNVTYYATGVPVTLNQTGIRSFCSFEDAVVRVQPTGAAIGAETACQALLPLNQ
Ga0210388_117999592	3300021181	Soil	KNQTGIRSFCSFADAVVRADPAGGNDSTLAACQALLPLS
Ga0210402_115511032	3300021478	Soil	TAVPVTLNQTGIRSFCSFEDAVIRVQPTGAAIASEAACEALGPLNQ
Ga0210409_104562251	3300021559	Soil	IRSFCSFEDAVIRVQPTGAGIGSESACQALLPLNQ
Ga0207928_10003957	3300025494	Arctic Peat Soil	GPPTVSYIANATPTTLNQTGIRAFCSYEDAVVRVQPAGTIVATVAACQVLSTI
Ga0208848_10401081	3300025509	Arctic Peat Soil	GPPTVSYIANATPTTLNQTGIRAFCSYADAVVRVQPAGTIVATVAACQVLSSL
Ga0207692_105788301	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	GIRSFCSFEDAVVRVDPAGGTVAGVAACQALLPLNQ
Ga0207663_109440991	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AAGVAGTPSVSYYANAKPVTLNQTGIRAFCSFEDAVVRVDPAGVGATSVATCQAFLPLNQ
Ga0207664_111928441	3300025929	Agricultural Soil	SVSYYANAKPVTLNQTGIRAFCSFEDAVVRVDPAGVGATSVATCQAFLPLNQ
Ga0209890_100381413	3300026291	Soil	YIANATPTTLNQTGIRAFCSYADAVVRVQPAGTIVATVAACQVLSTI
Ga0209730_10083222	3300027034	Forest Soil	PIAANQTGIRSFCSFEDAVVRVDPTGTLAGSEAACQALLPLNQ
Ga0207762_10239622	3300027063	Tropical Forest Soil	NQTGIRSFCSFEDAVVRVQPAGTAIATVAACQALNPLNQ
Ga0209525_10410351	3300027575	Forest Soil	GYKFTAGATGATPNVSYWVNGAPVTLNQTGIRAFCSFEDAVVRADPAGAGATTAATCAAFTPLN
Ga0208827_11813751	3300027641	Peatlands Soil	NQTGIRSFCSFEDGVIRVQPSGAAIPSEAACQALLPLNQ
Ga0209580_106679491	3300027842	Surface Soil	TLNQTGIRSFCSFEDAVVRVQPSGAAIASEGACQALLPLNQ
Ga0209274_102290662	3300027853	Soil	VPVTVNQTGIRSFCSFEDAVIRVQPSGGAIASEAACEALLPLNQ
Ga0209517_105374511	3300027854	Peatlands Soil	VAGTPSVSYYANGKPVTLNQTGIRAFCSFEDAVVRVDPAGAGATTVATCQAFLPLNQ
Ga0209380_100470892	3300027889	Soil	LNQTGIRSFCSFEDAVIRVQPTGAAIASEAACEALLPLNQ
Ga0209068_104105761	3300027894	Watersheds	GGTVAPFTTYTANGTPVTPNQTGVRAFCSFEDAVVRADPAGVGGITAALCGAFTPL
Ga0209006_100806574	3300027908	Forest Soil	PTVTYFATGVPVTVNQTGIRSFCSYEDAVVRVQPTGAAIASEAACQALLPLNQ
Ga0209006_101456724	3300027908	Forest Soil	QTGIRSFCSYEDGVVRVNPAGTAIATVAACQALAPL
Ga0209006_107493421	3300027908	Forest Soil	YYATGVPVTLNQTGIRSFCSFEDAVVRVQPTGAAIGAESTCQALLPLNQ
Ga0209583_102646612	3300027910	Watersheds	GTPVTPNQTGVRAFCSFEDAVVRADPAGVGGTTPPLCGAFTPL
Ga0209698_100126891	3300027911	Watersheds	LNQTGNRAFCAFEDAVVRVQPTGAAPASEAACQALLPLNQ
Ga0209698_105678341	3300027911	Watersheds	QTGNRSFCSFEDAVVRVDPAGGAVGTEATCQGLSPLNQ
Ga0209698_111719972	3300027911	Watersheds	QYYATAVPVTVNQTGIRSFCAFEDAVVRVDPTGAVAASEAACQALAPLNQ
Ga0265338_102603423	3300028800	Rhizosphere	ATGVPVTVNQTGIRSFCSFEDAVVRVQPTGAAIASEAACQALLPLNQ
Ga0308309_114873972	3300028906	Soil	VNQTGIRSFCSFEDAVIRVQPTGAGIPSEAACEALLPLN
Ga0311370_101998453	3300030503	Palsa	MTLNQTGIRSFCSFEDAVIRVQPTGAGIASEAACEALLPLNQ
Ga0316363_103290892	3300030659	Peatlands Soil	YYANGKPVTLNQTGIRAFCSFEDAVVRVDPAGAGATTVATCQAFLPLNQ
Ga0138296_10908072	3300030923	Soil	LGQTGNRSFCSYEDAVVRVDPAGAVVGGQPACALLNPLNQ
Ga0302325_109570941	3300031234	Palsa	TVNQTGIRSFCSFEDAVVRVQPTGAAIATEAACQALLPLNQ
Ga0265339_106048471	3300031249	Rhizosphere	TGTPITLNQTGIRSFCAFEDAVVRVQPLGTTPASEAACQALLPLNQ
Ga0307476_103294231	3300031715	Hardwood Forest Soil	LAAATPATLNQTGTRSFCSSEDAVVRVQPTGAAVTSVATCRVLTPLS
Ga0307477_104857951	3300031753	Hardwood Forest Soil	TPNQTGIRSFCSYEDAVVRYDSTGALAAGEAACQKLAPLN
Ga0310912_112550921	3300031941	Soil	MAVPITVNQTGIRSFCSIDDAVVRVQPTGAPIGTPFACAALSPLNQ
Ga0306926_120632872	3300031954	Soil	ITVNQTGLRSFCSFEDAVVRVQPTGAAIGSYAACQALTPLNQ
Ga0307471_1039587681	3300032180	Hardwood Forest Soil	GNRSFCSFEDAVVRTDPAGAVVAGQPACAALNPLNQ
Ga0335080_110188101	3300032828	Soil	LNQTGTRSFCSFEDAVVRVQPTGANIASEAACQALTPLQ
Ga0335070_119668592	3300032829	Soil	PVTLNQTGNRSFCSFEDAVVRVDPAGGAIAAGACAALLPLNQ
Ga0335073_100934955	3300033134	Soil	QYEVNAYPITINQTGIRAFCSVEDAVVRVQPTGASPANEAGCRVLNPLNQ
Ga0326728_102655691	3300033402	Peat Soil	TPVTLNQTGTMSFCSFEDAVVRVDPTGALAGSEAACQALMPMYN

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign