NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F089337

Metagenome Family F089337

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F089337
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 66 residues
Representative Sequence RLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGDTGPNMNAPKQTRP
Number of Associated Samples 97
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 5.88 %
% of genes near scaffold ends (potentially truncated) 88.07 %
% of genes from short scaffolds (< 2000 bps) 81.65 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (91.743 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(29.358 % of family members)
Environment Ontology (ENVO) Unclassified
(45.872 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(57.798 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.23%    β-sheet: 21.51%    Coil/Unstructured: 75.27%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF02621VitK2_biosynth 67.89
PF01904DUF72 7.34
PF04055Radical_SAM 4.59
PF04542Sigma70_r2 1.83
PF02272DHHA1 0.92
PF00697PRAI 0.92
PF0563523S_rRNA_IVP 0.92
PF09926DUF2158 0.92
PF08281Sigma70_r4_2 0.92
PF00263Secretin 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG1427Chorismate dehydratase (menaquinone biosynthesis, futalosine pathway)Coenzyme transport and metabolism [H] 67.89
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 7.34
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 1.83
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 1.83
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 1.83
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 1.83
COG0135Phosphoribosylanthranilate isomeraseAmino acid transport and metabolism [E] 0.92

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.74 %
UnclassifiedrootN/A8.26 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090014|GPIPI_17133422All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae3768Open in IMG/M
2170459002|FZY7DQ102F1A41All Organisms → cellular organisms → Bacteria551Open in IMG/M
2228664022|INPgaii200_c0814750All Organisms → cellular organisms → Bacteria950Open in IMG/M
3300002245|JGIcombinedJ26739_100028617All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus4903Open in IMG/M
3300003203|JGI25406J46586_10203207All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia578Open in IMG/M
3300005166|Ga0066674_10473276All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300005167|Ga0066672_10441354All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300005172|Ga0066683_10011691All Organisms → cellular organisms → Bacteria4649Open in IMG/M
3300005174|Ga0066680_10002256All Organisms → cellular organisms → Bacteria8401Open in IMG/M
3300005175|Ga0066673_10176697All Organisms → cellular organisms → Bacteria1204Open in IMG/M
3300005176|Ga0066679_10043647All Organisms → cellular organisms → Bacteria2546Open in IMG/M
3300005177|Ga0066690_10300379All Organisms → cellular organisms → Bacteria1084Open in IMG/M
3300005187|Ga0066675_10359828Not Available1066Open in IMG/M
3300005187|Ga0066675_10882204Not Available676Open in IMG/M
3300005446|Ga0066686_10062820All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2303Open in IMG/M
3300005536|Ga0070697_100099724All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2411Open in IMG/M
3300005540|Ga0066697_10833079All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300005552|Ga0066701_10802633All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300005561|Ga0066699_10312801All Organisms → cellular organisms → Bacteria1119Open in IMG/M
3300005561|Ga0066699_11212183All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium518Open in IMG/M
3300005569|Ga0066705_10842006All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300005576|Ga0066708_10037581All Organisms → cellular organisms → Bacteria2636Open in IMG/M
3300005841|Ga0068863_102478824All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia528Open in IMG/M
3300006032|Ga0066696_10439726All Organisms → cellular organisms → Bacteria853Open in IMG/M
3300006173|Ga0070716_100546551All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300006791|Ga0066653_10773204All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia504Open in IMG/M
3300006796|Ga0066665_11438695All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia535Open in IMG/M
3300006797|Ga0066659_10999730All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300006903|Ga0075426_11354886All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia540Open in IMG/M
3300009137|Ga0066709_102354789All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia727Open in IMG/M
3300009176|Ga0105242_10624286All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae1044Open in IMG/M
3300010301|Ga0134070_10030963All Organisms → cellular organisms → Bacteria1771Open in IMG/M
3300010326|Ga0134065_10081971All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300010335|Ga0134063_10580950All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300010337|Ga0134062_10044390All Organisms → cellular organisms → Bacteria1795Open in IMG/M
3300010361|Ga0126378_11290402All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300010364|Ga0134066_10014018All Organisms → cellular organisms → Bacteria1673Open in IMG/M
3300011271|Ga0137393_10066086All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2871Open in IMG/M
3300012189|Ga0137388_10919264All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300012198|Ga0137364_10702316All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300012200|Ga0137382_10151076All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria1574Open in IMG/M
3300012200|Ga0137382_10235360All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria1266Open in IMG/M
3300012202|Ga0137363_11438966All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300012206|Ga0137380_10404084All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter1212Open in IMG/M
3300012208|Ga0137376_10449256All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1119Open in IMG/M
3300012210|Ga0137378_11398292All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300012285|Ga0137370_10084419All Organisms → cellular organisms → Bacteria1766Open in IMG/M
3300012349|Ga0137387_10191894All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria1465Open in IMG/M
3300012362|Ga0137361_11530118All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300012922|Ga0137394_10980726All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300012925|Ga0137419_11060393All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300012927|Ga0137416_10013096All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae5062Open in IMG/M
3300012957|Ga0164303_10763739All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300014157|Ga0134078_10434153All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300014166|Ga0134079_10034794All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae1707Open in IMG/M
3300014166|Ga0134079_10244438All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300015245|Ga0137409_10242602All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae1604Open in IMG/M
3300017656|Ga0134112_10269304All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300017659|Ga0134083_10259097All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300017659|Ga0134083_10284818All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300018061|Ga0184619_10510561All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300018468|Ga0066662_12139074All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300018482|Ga0066669_10438112All Organisms → cellular organisms → Bacteria1118Open in IMG/M
3300018482|Ga0066669_12055488All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300018482|Ga0066669_12339874All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia510Open in IMG/M
3300019789|Ga0137408_1181831All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1421Open in IMG/M
3300021046|Ga0215015_11069610All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia508Open in IMG/M
3300021362|Ga0213882_10517741All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia512Open in IMG/M
3300021478|Ga0210402_10244294All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae1657Open in IMG/M
3300025922|Ga0207646_10967161All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300025939|Ga0207665_10684326All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300026295|Ga0209234_1315866All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300026300|Ga0209027_1217678All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300026316|Ga0209155_1082814All Organisms → cellular organisms → Bacteria1195Open in IMG/M
3300026317|Ga0209154_1174692All Organisms → cellular organisms → Bacteria866Open in IMG/M
3300026318|Ga0209471_1021887All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria3211Open in IMG/M
3300026327|Ga0209266_1166131All Organisms → cellular organisms → Bacteria866Open in IMG/M
3300026330|Ga0209473_1290090All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia548Open in IMG/M
3300026332|Ga0209803_1299440All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300026469|Ga0257169_1014483All Organisms → cellular organisms → Bacteria1056Open in IMG/M
3300026528|Ga0209378_1038265All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2446Open in IMG/M
3300026529|Ga0209806_1284502All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300026540|Ga0209376_1227085All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300026550|Ga0209474_10440809All Organisms → cellular organisms → Bacteria → Proteobacteria664Open in IMG/M
3300026552|Ga0209577_10143230All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1888Open in IMG/M
3300028536|Ga0137415_10509229All Organisms → cellular organisms → Bacteria1012Open in IMG/M
3300031546|Ga0318538_10727989All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia538Open in IMG/M
3300031754|Ga0307475_10144809All Organisms → cellular organisms → Bacteria1884Open in IMG/M
3300031819|Ga0318568_10825207All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia575Open in IMG/M
3300031820|Ga0307473_10459532All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300031941|Ga0310912_10022883All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4166Open in IMG/M
3300031962|Ga0307479_10196954All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1984Open in IMG/M
3300031962|Ga0307479_10654642All Organisms → cellular organisms → Bacteria1031Open in IMG/M
3300031962|Ga0307479_11529188All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300031962|Ga0307479_11698260All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia585Open in IMG/M
3300032001|Ga0306922_10767008All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1010Open in IMG/M
3300032001|Ga0306922_11670671All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300032042|Ga0318545_10229950All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia665Open in IMG/M
3300032052|Ga0318506_10396667All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia612Open in IMG/M
3300032174|Ga0307470_11003424All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium664Open in IMG/M
3300032180|Ga0307471_100900972All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1052Open in IMG/M
3300032770|Ga0335085_11931732All Organisms → cellular organisms → Bacteria601Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil29.36%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil19.27%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil11.01%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.34%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil7.34%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.42%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.83%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.83%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.92%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.92%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.92%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.92%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.92%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.92%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090014Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
2170459002Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cmEnvironmentalOpen in IMG/M
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300003203Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021362Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026340Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-AEnvironmentalOpen in IMG/M
3300026469Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-BEnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032042Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPIPI_003037602088090014SoilLSDPETLLRLTRAHRESEFASEQINLRKYYEKTVSVNGTRQDDWIWAAAVIGQWTPPGGQTGPNMNAPKQTRP
E1_007007802170459002Grass SoilAEQILLRKYYEKTITVNGTRKDDWIWGADITGQYVPPGGPTGPNMNAPKQTRP
INPgaii200_081475022228664022SoilTLLRLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRQ
JGIcombinedJ26739_10002861753300002245Forest SoilMVDGAYRLSLLKDPDTLLRLTRXRRESEFTKQQINLRKYYEKTISVNGTLQDEWIFGADIVGQWTPPGGATGPNMNAPKQTKP*
JGI25406J46586_1020320723300003203Tabebuia Heterophylla RhizosphereRFEPLDEPGTLLKLTRARRETEFESGQILLRKYYEKTITVKGMRKDDWIWHADITGQFVPPGGPTGPNMNAPKQTRP*
Ga0066674_1047327613300005166SoilRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRP*
Ga0066672_1044135413300005167SoilDPDTLLRLTRARRESEFAKQQINLRKYYEKTISVNGTLQDEWIFGADIVGQWTPPGGDTGPNMNAPKQTKP*
Ga0066683_1001169153300005172SoilETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRQ*
Ga0066680_10002256123300005174SoilLRLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRP*
Ga0066673_1017669713300005175SoilRLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRQ*
Ga0066679_1004364713300005176SoilKDPDTLLRLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRP*
Ga0066690_1030037923300005177SoilYRLSLLKDPDTLLRLTRARRETEFAKEQINLRKYYEKTISVNGTLSGEWIYGADVVGQWTPPGGDTGPNMNAPKQSKP*
Ga0066675_1035982823300005187SoilESEFASGAINLRKYYEKTISVNGTLHDEWIFGADIVGQWTPPGGETGPNMNAPKASKP*
Ga0066675_1088220423300005187SoilLLKLTRARRENEFEAQQILLRKYYEKTITVNGTRMDDWIWGADITGQFVPPGAPTGPNMNAPKQERP*
Ga0070710_1152733823300005437Corn, Switchgrass And Miscanthus RhizosphereKYYEKTITVNGTRKDDWIWAADITGQYVPPGGNTGPNMNAPKQTRP*
Ga0066686_1006282013300005446SoilRLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGDTGPNMNAPKQTRP*
Ga0070697_10009972413300005536Corn, Switchgrass And Miscanthus RhizosphereDTLLRLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADVVGQWTPPGGDTGPNMNAPKQTRP*
Ga0066697_1083307923300005540SoilRLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRP*
Ga0066701_1080263313300005552SoilQINLRKYFEKTISVNGTRQDDWIWAAAVIGQWTPPGGDTGPNMNAPKQTRP*
Ga0066699_1031280113300005561SoilEKQQINLRKYYEKTISVNGTLQDEWIFGADIVGQWTPPGGQTGPNMNAPKQTRP*
Ga0066699_1121218323300005561SoilRESEFESDQINLRKYYEKVITVNGTRQDEWIWGADITGQFVPPGGPTGPNMNAPKATRE*
Ga0066705_1084200623300005569SoilFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRQ*
Ga0066708_1003758113300005576SoilLVDGAYRLSLLKDPDTLLRLTRARRESEFAKQQINLRKYYEKTISVNGTLSDEWIFGADIVGQWTPPGGDTGPNMNAPKQTRQ*
Ga0068863_10247882423300005841Switchgrass RhizospherePVNEPGTLLKLTRGRRETEFEAQQILLRKYYEKTITVKGTRKDDWIWHADITGQYVPPGGPTGPNMNAPKQTRP*
Ga0066696_1043972623300006032SoilLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRP*
Ga0070716_10054655113300006173Corn, Switchgrass And Miscanthus RhizosphereELLNEPGTMLRLTRARRETEFESGQILLRKYYEKTITVNGTRQDDWIWGADVTGQYVPPGGPTGPNMNAPKQSRP*
Ga0066653_1077320413300006791SoilRARREGEFEKQQINLRKYYEKTISVNGTLNGEWIFGADVVGQWVPPGGQTGPNMNAPKPTHP*
Ga0066665_1143869523300006796SoilVDGAYRLSLLKDPDTLLRLTRARRETEFEKQQINLRKYYEKTISVNGTLQDEWIFGADIVGQWTPPGGQTGPNMNAPKQTRP*
Ga0066659_1099973023300006797SoilRLTRARRESEFAQQQINLRKYYEKTISVNGTLSGEWIFGADIVGQWTPPGGDTGPNMSAPKQTRQ*
Ga0075426_1135488613300006903Populus RhizosphereLVDGAYRLRLLKDPDTLMRLTRARRESEFPKEQINLRKYYEKTISVNGTLNGEWIFGADIVGQWTPLGGDTGPNMSAPKQTRP*
Ga0099828_1200313213300009089Vadose Zone SoilKTISVNGTRQDDWIWDTAVIGQWTPPGGDTGPNMNAPKQTKP*
Ga0066709_10235478923300009137Grasslands SoilAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGDTGPNMNAPKQTRP*
Ga0105242_1062428613300009176Miscanthus RhizosphereETEFEAEQILLRKYYEKTITVNGTRKDDWIWGADITGQYVPPGGPTGPNMNAPKQTRP*
Ga0134070_1003096333300010301Grasslands SoilKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRQ*
Ga0134088_1003951413300010304Grasslands SoilYYEKTISVNGTLQDEWIFGADIVGQWTPPGGQTGPNMNAPKETRP*
Ga0134065_1008197123300010326Grasslands SoilLRLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRQ*
Ga0134063_1058095023300010335Grasslands SoilQESEFEKQQINLRKYYEKTISVNGTLYGEWIFGADIVGQWTPPGGDTGPNMNAPKASKP*
Ga0134062_1004439033300010337Grasslands SoilAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRP*
Ga0126378_1129040213300010361Tropical Forest SoilDTLLRLTRARRESKFEKMQINLRKYYEKTISVNGTLYGEWIFGADIVAQWVPPGGQTGANMNAPRATRP*
Ga0134066_1001401833300010364Grasslands SoilNLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRP*
Ga0137393_1006608643300011271Vadose Zone SoilGKVVLVDGAYRLSLLNDPDTLLRLTRARRETEFEKQQINLRKYYQKTISVNGTLQDEWIFGADIVGQWTPPGGQTGPNMNAPKETRP*
Ga0137388_1091926413300012189Vadose Zone SoilEQINLRKYFEKTISVNGTRQDDWIWNAAVIGQWTPPGGDTGPNMNAPKQTKP*
Ga0137364_1070231613300012198Vadose Zone SoilRRESEFAKQQVNLRKYYEKTISVNGTLYDEWIFGADIIGQWTPPGGDTGPNMNAPKQSRQ
Ga0137382_1015107613300012200Vadose Zone SoilVVLVDGAYRLSLLKDPDTLLRLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRP*
Ga0137382_1023536013300012200Vadose Zone SoilVVLVDGAYRLSLLKDPDTLLRLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGDTGPNMNAPKQTRP*
Ga0137365_1060420823300012201Vadose Zone SoilSVNGTLQDEWIFGADIVGQWTPPGGQTGPNMNAPKETRP*
Ga0137363_1143896623300012202Vadose Zone SoilINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRQ*
Ga0137380_1040408413300012206Vadose Zone SoilGKVVLVDGAYRLSLLKDPDTLLRLTRAHRESEFAAEQINLRKYFEKTISVNGTRQDDWIWDAAVIGQWTPPGGDTGPNMNAPKQTKP*
Ga0137376_1044925623300012208Vadose Zone SoilVLVDGAYRLSLLKDPDTLLRLTRARRESEFAKQQVNLRKYYEKTISVNGTLYDEWIFGADIIGQWTPPGGDTGPNMNAPKQSRP*
Ga0137378_1139829223300012210Vadose Zone SoilDTLLCLTRARRETEFAKQQINLRKYYEKTISVNGTLQDEWIFGADIVGQWTPPGGDTGPNMSAPKQTRP*
Ga0137370_1008441933300012285Vadose Zone SoilMYFEKTISVNGTLFDEWIFGADIVGQWTRPGGDTGPNMNAPKKSRP*
Ga0137387_1019189413300012349Vadose Zone SoilLRLTRARRETEFEKQQINLRKYYEKTISVNGTLQDKWIFGADIVGQWTPPGGQTGPNMNAPKETRP*
Ga0137361_1153011823300012362Vadose Zone SoilQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRQ*
Ga0137394_1098072613300012922Vadose Zone SoilLLRLTRARRESEFAKQQINLRKYYEKTISVNGTLYDEWIFGADIIGQWTPPGGDTGPNMNAPKQTRP*
Ga0137419_1106039323300012925Vadose Zone SoilRLTRARRESEFEAEQILLRKYYEKTITINGTRKDDWIWGADITGQYVPPGGPTGPNMNAPKQTRP*
Ga0137416_1001309613300012927Vadose Zone SoilQQILLRKYYEKTISVNGTLYDEWIFGADIVGQWTPPGGDTGPNMNAPKQTKP*
Ga0137416_1064068513300012927Vadose Zone SoilKTVSVNGTLQDEWIFGADIVGQWTPPGGQTGPNMNAPKQTRP*
Ga0164303_1076373913300012957SoilRENEFETGQILLRKYYEKTITVNGTRQDDWIWGADVTGQYVPPGGSSGPNMNAPKQSRP*
Ga0134078_1043415313300014157Grasslands SoilNLRKYYEKTISVNGTLSDEWIFGADIVGQWTPPGGDTGPNMNAPKQTRQ*
Ga0134079_1003479413300014166Grasslands SoilETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRP*
Ga0134079_1024443823300014166Grasslands SoilKQQVNLRKYYEKTISVNGTLSDEWIFGADIVGQWTPPGGDTGPNMNAPKQTRQ*
Ga0137409_1024260213300015245Vadose Zone SoilTGKVVLVDGAYRLSPLKDPDTLLRLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGTTGPNMNAPKQTRP*
Ga0134112_1026930413300017656Grasslands SoilDPDTLLRLTRARRETEFEKQQINLRKYYEKTISVNGTLQDEWIFGADIVGQWTPPGGQTGPNMNAPKQARP
Ga0134083_1025909713300017659Grasslands SoilGAYRLSLLKDPDTLLRLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRQ
Ga0134083_1028481823300017659Grasslands SoilLLKDPDTLLRLTRARRETEFEKQQINLRKYYEKTISVNGTLQDEWIFGADIVGQWTPPGGQTGPNMNAPKQARP
Ga0184619_1051056113300018061Groundwater SedimentTEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRQ
Ga0066662_1213907413300018468Grasslands SoilLLKDHDPLLRLTRARRETEIEKQQINLRKYYEKTISVNGTLQDEWIFGADIVGQWTPPGGQTGPNMNAPKQTRP
Ga0066669_1043811213300018482Grasslands SoilLRLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRQ
Ga0066669_1205548813300018482Grasslands SoilFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRP
Ga0066669_1233987423300018482Grasslands SoilVVLVEGAYRLSLLKDPDTLLRLTRARRETEFEKQQVNLRKYYEKTISVNGTLQDEWIFGADIVGQWTPPGGDTGPNMNAPKQTRP
Ga0137408_118183123300019789Vadose Zone SoilVFTGKVVLVDGAYRLSPLKDPDTLLRLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRQ
Ga0215015_1106961023300021046SoilAYRFSLLSDPETLLRLTRAHRESEFASEQINLRKYYEKTVSVNGTLQDEWIFGADIVGQWTPPGGQTGPNMNAPKQTRP
Ga0213882_1051774113300021362Exposed RockKVMFVDGAYRFALVNEPKTLLRLTRARRETEFVVEQIKLRKYYEKTISVVGTRQDDWIWGADVVGQWTPPGGDTGPNMNAPRPTKP
Ga0210402_1024429413300021478SoilLTRARKENEFAKEQINLRKYYEKTISVNGTLYDDWIFGADIVGQWTPPGGDTGPNMSAPKQTRP
Ga0207646_1096716123300025922Corn, Switchgrass And Miscanthus RhizosphereTRARRETEFEKQQINLRKYYQKTISVNGTLQDEWIFGADIVGQWTPPGGQTGPNMNAPKETRP
Ga0207665_1068432623300025939Corn, Switchgrass And Miscanthus RhizosphereQQQINLRKYYEKTISVNGTLSDEWIFGADIVGQWTPPGGDTGPNMSAPKASRP
Ga0209234_131586613300026295Grasslands SoilKYYEKTISVNGTLSDEWIFGADIVGQWTPPGGDTGPNMNAPKQTRQ
Ga0209027_121767813300026300Grasslands SoilSGQILLRKYYEKMITVKGMRKDDWIWHADITGQYVPPGAPTGPNMNAPKQERP
Ga0209155_108281413300026316SoilLRLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRP
Ga0209154_117469213300026317SoilLKDPDTLLRLTRARRESEFAKQQINLRKYYEKTISVNGTLQDEWIFGADIVGQWTPPGGDTGPNMNAPKQTKP
Ga0209471_102188753300026318SoilINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRP
Ga0209266_116613123300026327SoilRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRQ
Ga0209473_129009023300026330SoilVMIDGAYRFQLLKDSDRILRLTRARRESEFASGAINLRKYYEKTISVNGTLHDEWIFGADIVGQWTPPGGETGPNMNAPKASKP
Ga0209803_129944013300026332SoilKDPDTLLRLTRARRETEFEKQQINLRKYYEKTISVNGTLQDEWIFGADIVGQWTPPGGQTGPNMNAPKQTRP
Ga0209377_124919423300026334SoilISVNGTLQDEWIFGADIVGQWTPPGGQTGPNMNAPKETRP
Ga0257162_102806113300026340SoilKYYQKTISVNGTLQDEWIFGADIVGQWTPPGGQTGPNMNAPKQTRP
Ga0257169_101448313300026469SoilNLRKYYQKTISVNGTLQDEWIFGADIVGQWTPPGGQTGPNMNAPKETRP
Ga0209378_103826543300026528SoilLVDGAYRLSPLKDPDTLLRLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRQ
Ga0209806_128450223300026529SoilEKEQINLRKYYEKTITVKGAREDDWIWRAAVTGQWLQPGEPTGPNMNAPPVPNR
Ga0209376_122708513300026540SoilPLRLTRARRETEFAQQQINLRKYYEKTISVNGTLQDDWIFGADIVGQWTPPGGATGPNMNAPKQTRQ
Ga0209474_1044080913300026550SoilINLRKYYEKVITVNGTRQDEWIWAADITGQFVPPGGPTGPNMNAPKPTRQ
Ga0209577_1014323023300026552SoilLNAKPKCSLEKFDGAYRFQLLKDPDTLLRLTRARRESEFAKEQINLRKYYEKTVSVNGTLYGEWIFGADIVGQWTPPGGDTGPNMNAPKQTRP
Ga0137415_1050922913300028536Vadose Zone SoilTEFEKQQINLRKYYEKTVSVNGTLQDEWIFGADIVGQWTPPGGQTGPNMNAPKQTRP
Ga0318538_1072798913300031546SoilVVLVDGAYRFALAREPERLLRLTRARRESEFAAEQIDLRKYYGKTLSVIGTRQDEWIWGADVAGQWTPPGGDTGPNMTAPKPTRP
Ga0307475_1014480913300031754Hardwood Forest SoilTLLRLTRARRESEFEADQINLRKYYEKVITVNGTRKDEWIFGADITGQFVPPGGQTGPNMSAPKASRP
Ga0318568_1082520723300031819SoilTRARRESEFAAEQIDLRKYYGKTLSVIGTRQDEWIWGADVAGQWTPPGGDTGPNMTAPKPTRP
Ga0307473_1045953223300031820Hardwood Forest SoilDPDTLLRLTRARRESEFAQEQINLRKYYQKTISVNGTLQGEWIFGADIVGQWTPPGGDTGPNIDAPKQSRP
Ga0310912_1002288383300031941SoilKVVLVDGAYRFALAREPERLLRLTRARRESEFAAEQIDLRKYYGKTLSVIGTRQDEWIWGADVAGQWTPPGGDTGPNMTAPKPTRP
Ga0307479_1019695423300031962Hardwood Forest SoilMLKKNIETFTGKVVMVDGAYRFSLLKDPDTSLRLTRAHRESEFAAEQINLRKYYEKTISVNGTRQDEWIWGASVIGQWTPPGGDTGPNMNAP
Ga0307479_1065464223300031962Hardwood Forest SoilRARRENEFAKEQINLRKYYEKTISVNGTLSGEWIFGADIVGQWTPPGGDTGPNMSAPKQTRP
Ga0307479_1152918813300031962Hardwood Forest SoilVLRLTRARKESEFAKQQINLRKYYEKTISVNGTLHDEWIFGADIVGQWTPPGGDTGPNMSAPKQTRP
Ga0307479_1169826013300031962Hardwood Forest SoilTGKVVLVDGAYRLRLLKDPDVLLRLTRARKENEFEKEQINLRKYYEKTISVNGTLSGEWVFGADVVGQWTPPGGDTGPNMSAPKQTRP
Ga0306922_1076700823300032001SoilVDGAYRFALAREPERLLRLTRARRESEFAAEQIDLRKYYGKTLSVIGTRQDEWIWGADVAGQWTPPGGDTGPNMTAPKPTRP
Ga0306922_1167067123300032001SoilRFAPINEPKTLLRLTRARRESEFTAEQIDLRKYYEKTLSVIGTRQNEWIWGADVAGQWTQRGADTGPNMNAPKPTRP
Ga0318545_1022995023300032042SoilFLGKVVLVDGAYRFALAREPERLLRLTRARRESEFAAEQIDLRKYYGKTLSVIGTRQDEWIWGADVAGQWTPPGGDTGPNMTAPKPTRP
Ga0318506_1039666723300032052SoilLRLTRARRESEFAAEQIDLRKYYGKTLSVIGTRQDEWIWGADVAGQWTPPGGDTGPNMTAPKPTRP
Ga0307470_1100342423300032174Hardwood Forest SoilEAINLRKYYEKTISVNGTLHDEWIFGADIVGQWTPPGGETGPNMNAPKASKP
Ga0307471_10090097223300032180Hardwood Forest SoilMVDGAYRFQLLKDPDTILRLTRARRESEFPAEAINLRKYYEKTISVNGTLHDEWIFGADIVGQWTPPGGATGPNMNAPKASKP
Ga0335085_1193173213300032770SoilAYRLELLNEPGTLLKLTRGRRESEFESGQILLRKYYEKTITVNGTRKDDWIWGADITGQYVPPGGATGPNMNAPKQTRP

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.