Metagenome / Metatranscriptome Family F089369

Basic Information
Family ID	F089369
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	58 residues
Representative Sequence	MRRVPHGGTTRPPMERPGSGYGRPVKLGPPTQLQAYAVKARKRVRDFSWLLAVSLDD
Number of Associated Samples	93
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.72 %
% of genes near scaffold ends (potentially truncated)	38.53 %
% of genes from short scaffolds (< 2000 bps)	94.50 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Most Common Taxonomy
Group	Unclassified (54.128 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.174 % of family members)
Environment Ontology (ENVO)	Unclassified (19.266 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.872 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.76% β-sheet: 0.00% Coil/Unstructured: 68.24%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF02036	SCP2	42.20
PF00106	adh_short	7.34
PF13561	adh_short_C2	3.67
PF14697	Fer4_21	2.75
PF02686	Glu-tRNAGln	2.75
PF03793	PASTA	1.83
PF02310	B12-binding	0.92
PF01425	Amidase	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0721	Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit	Translation, ribosomal structure and biogenesis [J]	2.75
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.92

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
All Organisms	root	All Organisms	45.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
cellular organisms	root	All Organisms → cellular organisms	45.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	44.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	44.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	21.10 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	21.10 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	8.26 %
Actinobacteria bacterium IMCC26256	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	1.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	8.26 %
Actinobacteria bacterium IMCC26256	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	1.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.13 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	8.26 %
Actinobacteria bacterium IMCC26256	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	1.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459022\|GZEQPF101A3K7G	Not Available	533	Open in IMG/M
3300002568\|C688J35102_120852268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1824	Open in IMG/M
3300004081\|Ga0063454_100051934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1640	Open in IMG/M
3300004114\|Ga0062593_100227433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1516	Open in IMG/M
3300004114\|Ga0062593_101769742	Not Available	678	Open in IMG/M
3300004153\|Ga0063455_100956197	Not Available	614	Open in IMG/M
3300004157\|Ga0062590_101536990	Not Available	670	Open in IMG/M
3300004479\|Ga0062595_100728523	Not Available	802	Open in IMG/M
3300004643\|Ga0062591_100213083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1433	Open in IMG/M
3300004643\|Ga0062591_102586750	Not Available	535	Open in IMG/M
3300005093\|Ga0062594_100518569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1015	Open in IMG/M
3300005093\|Ga0062594_100685684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	921	Open in IMG/M
3300005093\|Ga0062594_101235684	Not Available	744	Open in IMG/M
3300005175\|Ga0066673_10375782	Not Available	829	Open in IMG/M
3300005334\|Ga0068869_101253131	Not Available	653	Open in IMG/M
3300005356\|Ga0070674_100805150	Not Available	812	Open in IMG/M
3300005365\|Ga0070688_101551784	Not Available	540	Open in IMG/M
3300005406\|Ga0070703_10608618	Not Available	505	Open in IMG/M
3300005439\|Ga0070711_100523827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	980	Open in IMG/M
3300005445\|Ga0070708_102204461	Not Available	509	Open in IMG/M
3300005458\|Ga0070681_11406447	Not Available	621	Open in IMG/M
3300005467\|Ga0070706_101052208	Not Available	750	Open in IMG/M
3300005468\|Ga0070707_101140364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	746	Open in IMG/M
3300005538\|Ga0070731_10250395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1176	Open in IMG/M
3300005547\|Ga0070693_100412646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	939	Open in IMG/M
3300005556\|Ga0066707_10487447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	800	Open in IMG/M
3300005719\|Ga0068861_100929790	Not Available	826	Open in IMG/M
3300006047\|Ga0075024_100141830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1088	Open in IMG/M
3300006047\|Ga0075024_100797664	Not Available	528	Open in IMG/M
3300006052\|Ga0075029_100437791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	855	Open in IMG/M
3300006057\|Ga0075026_100030305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2464	Open in IMG/M
3300006057\|Ga0075026_100204304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1041	Open in IMG/M
3300006057\|Ga0075026_100731828	Not Available	594	Open in IMG/M
3300006172\|Ga0075018_10586041	Not Available	591	Open in IMG/M
3300006175\|Ga0070712_101071685	Not Available	699	Open in IMG/M
3300006354\|Ga0075021_10439798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	821	Open in IMG/M
3300006755\|Ga0079222_10679377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	809	Open in IMG/M
3300006755\|Ga0079222_12243652	Not Available	544	Open in IMG/M
3300006852\|Ga0075433_11399676	Not Available	605	Open in IMG/M
3300006854\|Ga0075425_100347822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1707	Open in IMG/M
3300006871\|Ga0075434_100811173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	952	Open in IMG/M
3300006871\|Ga0075434_102005570	Not Available	584	Open in IMG/M
3300006881\|Ga0068865_100596114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	933	Open in IMG/M
3300006903\|Ga0075426_11190809	Not Available	578	Open in IMG/M
3300006954\|Ga0079219_10831483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	732	Open in IMG/M
3300009012\|Ga0066710_101381374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1092	Open in IMG/M
3300009098\|Ga0105245_11251430	Not Available	790	Open in IMG/M
3300009143\|Ga0099792_10774709	Not Available	626	Open in IMG/M
3300009162\|Ga0075423_12353151	Not Available	580	Open in IMG/M
3300009177\|Ga0105248_11804658	Not Available	694	Open in IMG/M
3300009521\|Ga0116222_1248987	Not Available	766	Open in IMG/M
3300010396\|Ga0134126_11481573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	748	Open in IMG/M
3300010400\|Ga0134122_12266512	Not Available	588	Open in IMG/M
3300012212\|Ga0150985_123129441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1107	Open in IMG/M
3300012404\|Ga0134024_1163092	Not Available	510	Open in IMG/M
3300012409\|Ga0134045_1303810	Not Available	504	Open in IMG/M
3300012957\|Ga0164303_10236489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1037	Open in IMG/M
3300012960\|Ga0164301_11488930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	557	Open in IMG/M
3300012960\|Ga0164301_11556997	Not Available	547	Open in IMG/M
3300012972\|Ga0134077_10366400	Not Available	617	Open in IMG/M
3300012987\|Ga0164307_10759709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	766	Open in IMG/M
3300012987\|Ga0164307_11519883	Not Available	566	Open in IMG/M
3300012987\|Ga0164307_11550721	Not Available	560	Open in IMG/M
3300014325\|Ga0163163_10452270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1344	Open in IMG/M
3300014501\|Ga0182024_10004656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31346	Open in IMG/M
3300015371\|Ga0132258_12100288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1420	Open in IMG/M
3300017959\|Ga0187779_10149371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1439	Open in IMG/M
3300017959\|Ga0187779_11085578	Not Available	559	Open in IMG/M
3300017961\|Ga0187778_10995828	Not Available	580	Open in IMG/M
3300017974\|Ga0187777_10162348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1495	Open in IMG/M
3300017974\|Ga0187777_10831176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	661	Open in IMG/M
3300017999\|Ga0187767_10197722	Not Available	633	Open in IMG/M
3300018060\|Ga0187765_10916014	Not Available	594	Open in IMG/M
3300018429\|Ga0190272_11961389	Not Available	618	Open in IMG/M
3300019361\|Ga0173482_10652415	Not Available	537	Open in IMG/M
3300019362\|Ga0173479_10155980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	918	Open in IMG/M
3300019362\|Ga0173479_10400610	Not Available	662	Open in IMG/M
3300021432\|Ga0210384_10142114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2154	Open in IMG/M
3300023266\|Ga0247789_1123622	Not Available	529	Open in IMG/M
3300025912\|Ga0207707_10485106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1055	Open in IMG/M
3300025915\|Ga0207693_11135607	Not Available	592	Open in IMG/M
3300025922\|Ga0207646_10393543	Not Available	1252	Open in IMG/M
3300025925\|Ga0207650_11188425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	649	Open in IMG/M
3300025927\|Ga0207687_11204064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	651	Open in IMG/M
3300025934\|Ga0207686_10267398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1256	Open in IMG/M
3300025935\|Ga0207709_11364236	Not Available	587	Open in IMG/M
3300026325\|Ga0209152_10465327	Not Available	513	Open in IMG/M
3300027894\|Ga0209068_10037420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2427	Open in IMG/M
3300027903\|Ga0209488_10326919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1142	Open in IMG/M
3300027915\|Ga0209069_10290445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	864	Open in IMG/M
3300028577\|Ga0265318_10069127	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300028770\|Ga0302258_1114173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	658	Open in IMG/M
3300028800\|Ga0265338_10336998	Not Available	1088	Open in IMG/M
3300029989\|Ga0311365_11941056	Not Available	503	Open in IMG/M
3300030294\|Ga0311349_10606121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1035	Open in IMG/M
3300031232\|Ga0302323_102371398	Not Available	605	Open in IMG/M
3300031538\|Ga0310888_10587072	Not Available	675	Open in IMG/M
3300031847\|Ga0310907_10757418	Not Available	541	Open in IMG/M
3300031854\|Ga0310904_10931313	Not Available	615	Open in IMG/M
3300031902\|Ga0302322_100163524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	2397	Open in IMG/M
3300032160\|Ga0311301_10003174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	61200	Open in IMG/M
3300032174\|Ga0307470_10959434	Not Available	677	Open in IMG/M
3300032828\|Ga0335080_10237470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1995	Open in IMG/M
3300032892\|Ga0335081_12558227	Not Available	525	Open in IMG/M
3300032954\|Ga0335083_11008890	Not Available	655	Open in IMG/M
3300033433\|Ga0326726_11116123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	767	Open in IMG/M
3300034195\|Ga0370501_0314375	Not Available	566	Open in IMG/M
3300034281\|Ga0370481_0023060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	1840	Open in IMG/M
3300034281\|Ga0370481_0233282	Not Available	657	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.73%
Host-Associated	Host-Associated	19.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.56%
Plants	Host-Associated → Plants	19.27%
Aquatic	Environmental → Aquatic	9.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.76%
Sediment	Environmental → Aquatic → Sediment	9.17%
Peat	Environmental → Terrestrial → Peat	5.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.59%
Roots	Host-Associated → Plants → Roots	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.53%
Loam	Environmental → Terrestrial → Soil → Loam	14.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.27%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.50%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	9.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.26%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.50%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.59%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.75%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459022	Grass soil microbial communities from Rothamsted Park, UK - FA2 (control condition)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028770	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_4	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M
3300034281	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FA2_01218630	2170459022	Grass Soil	VLRVDDVMRRVPHGGTTRPPMERPGTGYGRPVKLGPSTQLQAYAVKARKRVRDFSWLL
C688J35102_1208522683	3300002568	Soil	MRRHPHGASSRPPLPRPGNGYGRSARLGPPHQLRAFASKASKRVRDFNWLLAVSLDD*
Ga0063454_1000519342	3300004081	Soil	MRRHPHGASSRPPLPRPGNGYGRSARLGPPHQLRAFASKASKRVRDFNWLLAVSLYD*
Ga0062593_1002274335	3300004114	Soil	MRRVPHGGTTRPPMERPGNGYGRRPRLGPPTQLQAYAVKARKRVRDFSWLLAVSLDD*
Ga0062593_1017697421	3300004114	Soil	MRRIPHGATTRPPLSRPGSGYGRPVKLGPSNQLRAYATRSRARVRDFGMLLAVSLDEG*
Ga0063455_1009561971	3300004153	Soil	MRRVPHGGTTRPPMERPGTGYGRPVKLGPSTQLQAYAVKARKRVRDFSWLLAVSLED*
Ga0062590_1015369901	3300004157	Soil	MRRIPHGGTTRPPLARPGSGYGRPVKLGPSHQLRAYATRSRARVRDFGMLLAVSLDES*
Ga0062595_1007285232	3300004479	Soil	GVMRRIPHGATTRPPLSRPGSGYGRPVKLGPSNQLRAYATRSRARVRDFGMLLAVSLDES
Ga0062591_1002130832	3300004643	Soil	MRRVPHGATTRPPLARPGSGYGRPAKLGPPKQLRAYAWRSRARVRDFTALLAVSLDES*
Ga0062591_1025867501	3300004643	Soil	MRRIPHGGTTRPPLARPGSGYGRPVKLGPSHQLRAYATRSRARVRDFGMLL
Ga0062594_1005185692	3300005093	Soil	VDDVMRRVPHGGTTRPPMERPGSGYGRPVKLGPPSQLQAYAVKSRKRVRDFSWLLAVSLED*
Ga0062594_1006856841	3300005093	Soil	MRRIPHGATTRPPLARPGSGYGRPVKLGPSKQLRAYATRSRARVRDFGMLLAVSLDEG*
Ga0062594_1012356841	3300005093	Soil	MRRIPHGATTRPPLARPGSGYGRPVKLGPSKQLRAYATRSRARARDFGMLLAVSLDDG*
Ga0066673_103757821	3300005175	Soil	VLSVIQESGVMRRIPHGATSRPPLERPGSGYGRPVKLGPSNQLRAYATRSRARVRDFAMLLAVSLEES*
Ga0068869_1012531312	3300005334	Miscanthus Rhizosphere	MRRVPHGGTTRPPMERPGSGYGRPVKLGPPSQLQAYAVKSRKRVRDFSWLLAVSLED*
Ga0070674_1008051502	3300005356	Miscanthus Rhizosphere	WIVEESGVMRRIPHGATTRPPLARPGSGYGRPVKLGPSKQLRAYATRSRARARDFGMLLAVSLDDG*
Ga0070688_1015517842	3300005365	Switchgrass Rhizosphere	RRIPHGATTRPPLARPGSGYGRPVKLGPSKQLRAYATRSRARVRDFGMLLAVSLDEG*
Ga0070703_106086181	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	DVMRRVPHGGTTRPPMERPGSGYGRPVKLGPPSQLQAYAVKSRKRVRDFSWLLAVSLED*
Ga0070711_1005238272	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRRVPHGGTTRPPMERPGTGYGRPVKLGPPSQLQAYAVKARKRVRDFSWLLAVSLED*
Ga0070708_1022044612	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRRVPHGGTTRPPMERPGSGYGRPVKLGPSTQFQAYAVKSRKRVRDFSWLLAVSLDD*
Ga0070681_114064472	3300005458	Corn Rhizosphere	MRRVPHGGTNRPPMERPGAGYGRPQKLAPSTQLQAYAVKSRRRVRDFSWLLAVSLDD*
Ga0070706_1010522082	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRRVPHGGTTRPPMERPGSGYGRPVKLGPSTQLQAYAVKARKRVRDFSWLLAGSLED*
Ga0070707_1011403641	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRRVPHGGTSRPPLERPGTGYGRPVKLGPSTQLQAYAVKARKRVRDFSWLLAVSLED*
Ga0070731_102503952	3300005538	Surface Soil	VHVLREDAVTRRVPHGGTTHPQMERPGSGYGRPLKLGPSTQFQAYAVKARKRARDFSWLLAVSLDD*
Ga0070693_1004126462	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MRRVPHGGTNRPPMERPGAGYGRPQKLAPSTQLQAYAVKSRRRVRDFSWLL
Ga0066707_104874472	3300005556	Soil	MRRVPHGGTTRPPMERPGSGYGRPVKLGPPTQLQAYAVKARKRVRDFNWLFAVSLDD*
Ga0068861_1009297902	3300005719	Switchgrass Rhizosphere	MRRIPHGATTRPPLARPGSGYGRPVKLGPSKQLRAYATRSRARVRDFGMLLAVSLDDG*
Ga0075024_1001418302	3300006047	Watersheds	MHRGYAREQGAGVMRRYPHGATSRPPLPRPGNGYGRPARLGPPHQLRAFASKASKRVRDFNWLLAVSLDD*
Ga0075024_1007976641	3300006047	Watersheds	MRRVPHGATTRPPLSRPGSGYGRPVKLGPPDQLQAVAVKSRKRNGDFGMLLAVSLEE*
Ga0075029_1004377912	3300006052	Watersheds	MRRLPHGATTRPPLPRPGNGYGRPLKPGPSDRLQAFAVKSRKRVRDPNWLLAVPLDD*
Ga0075026_1000303051	3300006057	Watersheds	VRRVPHGATTRPPLSRPGSGYGRPVKLGPPDQLQAVAVKSRKRNGDFGMLLAVSLEE*
Ga0075026_1002043042	3300006057	Watersheds	MRRYPHGATSRPPLPRPGNGYGRPARLGPPHQLRAFASKASKRVRDFNWLLAVSLDD*
Ga0075026_1007318282	3300006057	Watersheds	MRRVPHGGTTSPPMPRPGSGYGRPVKLGPSTQLQAYAVKSRKRMRDFGWLLAVSLDD*
Ga0075018_105860411	3300006172	Watersheds	VMHRGYAREQGAGVMRRYPHGATSRPPLPRPGNGYGRPARLGPPHQLRAFASKASKRVRDFNWLLAVSLDD*
Ga0070712_1010716852	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRRVPHGGTTRPPMERPGTGYGRPVKLGPPTQLQAYAVKARKRVRDFSWLLAVSLED*
Ga0075021_104397981	3300006354	Watersheds	MMRRVPHGATTRPPLSRPGSGYGRPVRLGPPEQLQAVAVKSRKRNGDLGMLLAVSLEE*
Ga0079222_106793772	3300006755	Agricultural Soil	MRRVPHGGTTRPPMERPGSGYGRPVKLGPPSQLQAYAVKARKRVRDFSWLLAVSLED*
Ga0079222_122436521	3300006755	Agricultural Soil	MRRVPHGATTRPPLSRPGSGYGRPVKLGPSNQLRAYATRSRTRVRDFGLLLAVSLDDA*
Ga0075433_113996762	3300006852	Populus Rhizosphere	VDDVMRRVPHGGTTRPPMERPGSGYGRPVKLGPPSQLQAYAVKSRKRVRD
Ga0075425_1003478222	3300006854	Populus Rhizosphere	MRRVPHGGTTRPPMERPGSGYGRPVKLGPPTQLQAYAVKARKRVRDFSWLLAVSLDD*
Ga0075434_1008111731	3300006871	Populus Rhizosphere	MRRVPHGGTTRPPMERPGSGYGRPVKLGPPTQLQAYAVKARKRVRDFSWLL
Ga0075434_1020055702	3300006871	Populus Rhizosphere	MRRIPHGGTTRPPLARPGSGYGRPVKLGPSHQLRAYATRSRARVRDFGMLLAVSLDEG*
Ga0068865_1005961142	3300006881	Miscanthus Rhizosphere	MRRVPHGGITRPPMERPGSGYGRPVKLGPPSQLQAYAVKSRKRVRDFS
Ga0075426_111908091	3300006903	Populus Rhizosphere	EDEAQVQRVDEVMRRVPHGGTTRPPMERPGSGYGRPVKLGPPTQLQAYAVKARKRVRDFSWLLAVSLDD*
Ga0079219_108314831	3300006954	Agricultural Soil	MRRVPHGGTTHPPIERPGSGYGRPLKLGPSTQFQAYAVKARKRARDFSWLLAV
Ga0066710_1013813742	3300009012	Grasslands Soil	MRRVPHGGTTRPPMERPGSGYGRPVKLGPPTQLQAYAVKARKRVRDFNWLFAVSLDD
Ga0105245_112514301	3300009098	Miscanthus Rhizosphere	MRRIPHGATTRPPLARPGSGYGRPVKLGPSKQLRAYATRSRARVRDFGMLLAVSLEEG*
Ga0099792_107747092	3300009143	Vadose Zone Soil	VWVDDLMRRVPHGGTTRPPMERPGTGYGRPVKLGPSTQLQAYAVKARKRVRDFSWLLAVSLED*
Ga0075423_123531512	3300009162	Populus Rhizosphere	RVPHGGTTRPPMARPGTGYGRPLKLGPPSQLQAYAVKSRKRVRDFTWLLAVSLDD*
Ga0105248_118046581	3300009177	Switchgrass Rhizosphere	VDDVMRRVPHGGTTRPPMERPGSGYGRPVKLGPPSQLQAYAVKARKRVRDFTWLLAVSLED*
Ga0116222_12489871	3300009521	Peatlands Soil	MRRVPHGASTRPPLVRPGSGYGRPVKLGPSSQLQAYAVNSRARVRDFGWLLAVSLEDA*
Ga0134126_114815732	3300010396	Terrestrial Soil	MMRRYPKGATSHPPLARPGNGYGRPARLGPPHQLRAFASKASKRVRDFNWLLAVSLDD*
Ga0134122_122665121	3300010400	Terrestrial Soil	MRRVPHGATTRPPLARPGSGYGRPVKLGPPDQLQEFAVKSRKRVRDF
Ga0150985_1231294412	3300012212	Avena Fatua Rhizosphere	MRRIPHGGTTRPPLARPGSGYGRPVKLGPSHQLRAYATRSRARVRDFGMLLAVSLDDS*
Ga0134024_11630922	3300012404	Grasslands Soil	EDEAQVVWVDDLMRRVPHGGTTRPPMERPGTGYGRPVKLGPSTQLQAYAVKARKRVRDFSWLLAVSLDD*
Ga0134045_13038102	3300012409	Grasslands Soil	HEDEAQVVWVDDLMRRVPHGGTTRPPMERPGTGYGRPVKLGPSTQLQAYAVKARKRVRDFSWLLAVSLED*
Ga0164303_102364891	3300012957	Soil	MRRIPHGATTRPPLARPGSGYGRPVKLGPSKQLRAYATRSRARVRDFGML
Ga0164301_114889301	3300012960	Soil	MRPPRGATTHPPLRRPGNGYGRPLKVGPSHQLRAFAVKASKRTRDAGWLLAVPLDD
Ga0164301_115569972	3300012960	Soil	MRRVPHGATTRPPLARPGSGYGRSVKLGPSKQLRAHATRSRARVRDFGMLLAVSLDES*
Ga0134077_103664001	3300012972	Grasslands Soil	TTRPPMERPGSGYGRPVKLGPPTQLQAYAVKARKRVRDFSWLLAVSLED*
Ga0164307_107597092	3300012987	Soil	VLRVDDVMRRVPHGGTTRPPMERPGTGYGRPVKLGPSTQLQAYAVKARKRVRDFSWLLAVSLED*
Ga0164307_115198831	3300012987	Soil	MRRIPHGATTRPPLSRPGSGYGRPVKLGPSKQLRAHATRSRARVRDFGMLLAVSLDES*
Ga0164307_115507211	3300012987	Soil	GATTRPPLARPGSGYGRPVKLGPSKQLRAYATRSRARVRDFGMLLAVSLDEG*
Ga0163163_104522701	3300014325	Switchgrass Rhizosphere	ESGVMRRIPHGATTRPPLARPGSGYGRPVKLGPSKQLRAYATRSRARVRDFGMLLAVSLDEG*
Ga0182024_1000465621	3300014501	Permafrost	MRRVPHGASTRPPLERPGSGYGRPVKLGPSSQLQAYAVKSRARMRDFGWLLAVSLEDA*
Ga0132258_121002882	3300015371	Arabidopsis Rhizosphere	VDDVMRRVPHGGTTRPPMERPGSGYVRPVKLGPPSQLQAYAVKARKRVRDFSWLLAVSLED*
Ga0187779_101493712	3300017959	Tropical Peatland	MRRVPHGASTRPPMVRPGSGYGRPVKLGPSSQLQAYAVKSRARVRDFGWLLAVSLDDA
Ga0187779_110855782	3300017959	Tropical Peatland	MRRVPHGGTSHPPMSRPGSGYGRPQQLGPPTQLQAYAVKSRTRVRDFGWLLA
Ga0187778_109958282	3300017961	Tropical Peatland	RRVPHGGSTRPPMVRPGSGYGRPVKLGPSSQLQAYAVKSRARVRDFGWLLAVSLDDA
Ga0187777_101623482	3300017974	Tropical Peatland	MRRLPHGGTSRPPLERPGSGYGRPLKLGPPTQLQVFAVKARKRVRDFSWLLAVSLDD
Ga0187777_108311762	3300017974	Tropical Peatland	MRRVPHGGTSHPPMSRPGSGYGRPQQLGPPTQLQAYAVKSRTRVRDFGWLLAVVL
Ga0187767_101977221	3300017999	Tropical Peatland	MRRVPHGASTRPPMARPGSGYGRPVKLGPSSQLQAYAVKSRARVRDFGWLLAVSLDDA
Ga0187765_109160141	3300018060	Tropical Peatland	MRRVPHGGTSHPPMSRPGSGYGRPQQLGPPTQLQAYAVKSRTRVRDFGWLLAVVLDD
Ga0190272_119613892	3300018429	Soil	MRRIPHGATTRPPLSRPGSGYGRPVKLGPSKQLRAYATRSRTRVRNFEMLLAISLEEG
Ga0173482_106524152	3300019361	Soil	MRRIPHGATTRPPLARPGSGYGRPVKLGPSKQLRAYATRSRARVRDF
Ga0173479_101559802	3300019362	Soil	MRRVPHGGTTRPPMERPGNGYGRRPRLGPPTQLQAYAVKARKRVRDFSWLLAVSLDD
Ga0173479_104006102	3300019362	Soil	MRRIPHGATTRPPLARPGSGYGRPVKLGPSKQLRAYATRSRARVRDFGMLLAVSLDDG
Ga0210384_101421142	3300021432	Soil	MRRVPHGASTRPPLARPGSGYGRPVKLGPSSQLQAYAVKSRARVRDFGWLLAVSLEDA
Ga0247789_11236221	3300023266	Soil	RESRADADREEVRVMRRVPHGGTTRPPMERPGNGYGRRPRLGPPTQLQAYAVKARKRVRDFSWLLAVSLDD
Ga0207707_104851061	3300025912	Corn Rhizosphere	MRRVPHGGTNRPPMERPGAGYGRPQKLAPSTQLQAYAVKSRRRVRDFSWLLAVSLDD
Ga0207693_111356071	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VMRRIPHGATTRPPLARPGSGYGRPVKLGPSNQLRAYATRSRARVRDFGMLLPYRSTRA
Ga0207646_103935432	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VDDVMRRVPHGGTSRPPLERPGTGYGRPVKLGPSTQLQAYAVKARKRVRDFSWLLAVSLE
Ga0207650_111884251	3300025925	Switchgrass Rhizosphere	MRRVPHGGTTRPPMERPGNGYGRRPRLGPPTQLQAYAVKARKRVRDFSW
Ga0207687_112040641	3300025927	Miscanthus Rhizosphere	MRRIPHGATTRPPLARPGSGYGRPVKLGPSKQLRAYATRSRARARDFGMLLA
Ga0207686_102673982	3300025934	Miscanthus Rhizosphere	MRRIPHGATTRPPLARPGSGYGRPVKLGPSKQLRAYATRSRARARDFGMLLAVSLDDG
Ga0207709_113642362	3300025935	Miscanthus Rhizosphere	AQVLRVDDVMRRVPHGGTTRPPMERPGSGYGRPVKLGPPSQLQAYAVKSRKRVRDFSWLLAVSLED
Ga0209152_104653272	3300026325	Soil	HPPLRRPGNGYGRPLKVGPSHQLRAFAVKASKRARDAGWLLAVPLDD
Ga0209068_100374203	3300027894	Watersheds	MMRRVPHGATTRPPLSRPGSGYGRPVRLGPPEQLQAVAVKSRKRNGDLGMLLAVSLEE
Ga0209488_103269191	3300027903	Vadose Zone Soil	TGSHEDEAQVVWVDDLMRRVPHGGTTRPPMERPGTGYGRPVKLGPSTQLQAYAVKARKRVRDFSWLLAVSLED
Ga0209069_102904452	3300027915	Watersheds	MRRVPHGATTRPPLSRPGSGYGRPVKLGPPDQLQAVAVKSRKRNGDFGMLLAVSLEE
Ga0265318_100691271	3300028577	Rhizosphere	TRERGVMRRNAHGATTRPPLPRPGSGYGRPVKAGPSNQLHAHATRSRTRVRDFGMLLAVSLDES
Ga0302258_11141732	3300028770	Fen	MRRPPHGGTTRPALPRPGNGYGRPVKAGPSDRLQAFAVKSRTRRRDPNWLLAISLDDEVPARP
Ga0265338_103369982	3300028800	Rhizosphere	MRRLAHGATTRPPLERPGSGYGRPVKLGPSKQLHAYATRSRTRVRDFGMLLAVSLEEN
Ga0311365_119410561	3300029989	Fen	GSQQIGRLPSEVMHRGYAREQGAGVMRRYPHGATSRPPLPRPGNGYGRPARLGPPHQLRAFASKASKRVRDFNWLLAVSLDD
Ga0311349_106061211	3300030294	Fen	SVMRRLPHGATTRPPMPRPGNGYGRPLKAGPSDRLQAFAAKARKRVRDPNWLLAVTLDD
Ga0302323_1023713982	3300031232	Fen	MRRLAHGATTRPPLARPGSGYGRPVKLGPSSQLQAHAVKSRVRVRDFGMLLAV
Ga0310888_105870722	3300031538	Soil	TTRPPLARPGSGYGRPVKLGPSKQLRAYATRSRARVRDFGMLLAVSLDDG
Ga0310907_107574182	3300031847	Soil	MRRVPHGGTTRPPLERPGSGYGRRPKLGPPIQLQAYAVKSRKRVRDFSWLLAVS
Ga0310904_109313131	3300031854	Soil	MRRVPHGGTTRPPMERPGNGYGRRPRLGPPTQLQAYAVKARKRVRDFSWLLAVS
Ga0302322_1001635242	3300031902	Fen	MRRLPHGATTRPPMPRPGNGYGRPLKAGPSDRLQAFAAKARKRVRDPNWLLAVTLDD
Ga0311301_1000317454	3300032160	Peatlands Soil	MRRVPHGASTRPPLVRPGSGYGRPVKLGPSSQLQAYAVNSRARVRDFGWLLAVSLEDA
Ga0307470_109594341	3300032174	Hardwood Forest Soil	GDFWGGLLTGSRGDEAQVLRVDDVMRRVPHGGTTRPPMERPGSGYGRPVKLGPPSQLQAYAVKSRKRVRDFSWLLAVSIED
Ga0335080_102374704	3300032828	Soil	MRRVPHGGTTRPPLERPGTGYGRPLKLGPSVQLQAYAVKARKRLRDFSWLLAVSLDD
Ga0335081_125582272	3300032892	Soil	TVMRRVPHGGTSHPPMSRPGSGYGRPQKLGPPTQLQAYAVKSRTRVRDFGWLLAVVLDD
Ga0335083_110088901	3300032954	Soil	MRRFAHGATSRPPLPRPGNGYGRPARLGPPHQLRAFASKAGKRVRDFNWLLAVSLDD
Ga0326726_111161232	3300033433	Peat Soil	MRRLPHGATTRPPMPRPGNGYGRPVKLGPSSQLRAFAVKASKRVRDVNWLLAVNLDDEFETGARA
Ga0370501_0314375_198_374	3300034195	Untreated Peat Soil	MMRRVPHGATTRPPLSRPGSGYGRPVKLGPPDQLQEVAVKSRKRNGDFGMLLAVSLEE
Ga0370481_0023060_1457_1630	3300034281	Untreated Peat Soil	MRRLPHGATTRPPMPRPGNGYGRPLKAGPSDRLQAFAVKARKRVRDPNWLLAVTLDD
Ga0370481_0233282_322_495	3300034281	Untreated Peat Soil	MRRVPHGATTRPPLARPGSGYGRPVKLGPPDQLQEVAVKSRKRMRDFAMLLAVSLEE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089369

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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