Metagenome / Metatranscriptome Family F089447

Basic Information
Family ID	F089447
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	124 residues
Representative Sequence	LAFAALLLTLGEAHAQYAYVTHPNVLVEQRATVAVLPANPLRAFVYCVIASPGKGQPLAPSVVTMGDAITGVAVHYPDHRPQLWGNTGAVWVYSDQVALISCTELVRRQKR
Number of Associated Samples	91
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	50.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	4.59 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Most Common Taxonomy
Group	Unclassified (96.330 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.596 % of family members)
Environment Ontology (ENVO)	Unclassified (20.183 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.881 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 5.04% β-sheet: 25.90% Coil/Unstructured: 69.06%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF02515	CoA_transf_3	3.67
PF04357	TamB	1.83
PF00884	Sulfatase	1.83
PF05199	GMC_oxred_C	1.83
PF01569	PAP2	1.83
PF01609	DDE_Tnp_1	0.92
PF12773	DZR	0.92
PF04909	Amidohydro_2	0.92
PF13560	HTH_31	0.92
PF02954	HTH_8	0.92
PF04185	Phosphoesterase	0.92
PF13474	SnoaL_3	0.92
PF00115	COX1	0.92
PF04679	DNA_ligase_A_C	0.92
PF13649	Methyltransf_25	0.92
PF00069	Pkinase	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.67
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	3.67
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	1.83
COG2911	Phospholipid transport to the outer membrane protein TamB	Cell wall/membrane/envelope biogenesis [M]	1.83
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.92
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.92
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.92
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.92
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.92
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.92
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.92
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.92

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.33 %
All Organisms	root	All Organisms	3.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.33 %
cellular organisms	root	All Organisms → cellular organisms	3.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.67 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005534\|Ga0070735_10005859	All Organisms → cellular organisms → Bacteria	10115	Open in IMG/M
3300005614\|Ga0068856_100046612	Not Available	4269	Open in IMG/M
3300006893\|Ga0073928_10000070	All Organisms → cellular organisms → Bacteria	229284	Open in IMG/M
3300010376\|Ga0126381_100727914	Not Available	1420	Open in IMG/M
3300010379\|Ga0136449_100017495	All Organisms → cellular organisms → Bacteria	18675	Open in IMG/M
3300017936\|Ga0187821_10062252	Not Available	1346	Open in IMG/M
3300031708\|Ga0310686_100857095	Not Available	1831	Open in IMG/M
3300031890\|Ga0306925_10461159	Not Available	1357	Open in IMG/M
3300031947\|Ga0310909_10329669	Not Available	1281	Open in IMG/M
3300032160\|Ga0311301_10041895	All Organisms → cellular organisms → Bacteria	10990	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.25%
Host-Associated	Host-Associated	2.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.16%
Aquatic	Environmental → Aquatic	10.09%
Plants	Host-Associated → Plants	1.83%
Fungi	Host-Associated → Fungi	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.16%
Freshwater	Environmental → Aquatic → Freshwater	7.34%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.83%
Sediment	Environmental → Aquatic → Sediment	0.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.92%
Mycelium	Host-Associated → Fungi → Mycelium	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.55%
Loam	Environmental → Terrestrial → Soil → Loam	17.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.34%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.92%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.34%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.83%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.34%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.83%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.92%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_122566402	3300000789	Soil	MNRPPTLHLAFAALLLTLGEAHAQYAYVTHPNVLVEQRATVAVLPANPLRAFAYCVIASPGKGEPLAPSVVRMGDATRGVPVQYPDRLPKFWASTGEVWVYSDQVALISCTELVRRQKR*
JGI12635J15846_108819151	3300001593	Forest Soil	AQRSRVLVLSSDLARKNIGRRSPHQSQRNCGSEMSRPRVFLLALAVLCLMLGKAHAQYAYVTHPDALVESRATTAVLPANPYRAFVYCVIASPHKGEPLAPSVVTMGNATTGVLVQYPDRPAKLWGNTGTVWVFSDQTALISCTELVIPPYRTPQHGGTS*
JGIcombinedJ26739_1003557862	3300002245	Forest Soil	MSGPVPTENSESMEKSSDLLALAVQLLSLGKAHAQYAYVTHPNVLVDQGATVAVLPANPLRAFVYCIIASPRKGDALAPSAVTMGSPAAGVPVYFPDRPPKAWANSGEVWVFSDQVALISCTELVNRRKASRTSAAPSPNKQXPM*
JGIcombinedJ26739_1006312601	3300002245	Forest Soil	AYITRSKVLVEQHATVAVLSANLYLQIRSAPFVYCVIASPGKGEALAPSVVTMGDATTGVPVQYPDRPPKLWASTGEVWVFSDQTALISCTELVRKQNLGSASKTTPAPVRR*
Ga0062384_1000050743	3300004082	Bog Forest Soil	VLAALHVIFGKAHAQYAYVTYPGAVIEQGATTAVLPANPLRAFVYCVIVSPDKGEPLAPLVVKMGNPTTGSVPIQYPDRPPQPWGNTGEVWIFSDQVALISCTERQKAKAGPDLRKVQE*
Ga0062389_1027899462	3300004092	Bog Forest Soil	MSRPRVSLLAFSALFLTLGGTYPQYAYVTYPDAMVERGALTAVLPANPLRAFAYCVIAGPGKDEPLAPAVVTMGNTTTAVRVRYPGQPSQLWGSTGAIWVVSDQLALISCTELVKTPGVTGPR*
Ga0070709_105742861	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNISRSLLLTSAAIFLTFGNAHAQYAYVTHPDVVVEPQATVAVLPANPFRVFVYCTIASPKKGEPFAPSVVTMGDAASAVAIQYPDRRPQPWGNAGKLWVFSDEAALVSCTELVRRTGSGSKK*
Ga0070708_1003143661	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SEKKKPCVSGVTYSAEPSTNKRNDHARTWCVGQRGYPVSPMNRPPTLHLAFAALLLTLGEAHAQYAYVTHPNVLVEQRATVAVLPANPLRAFAYCVIASPGKGEPLAPSVVRMGDATRGVPVQYPDRPPKFWASTGEVWVYSDQVALISCTELVRRQKR*
Ga0070706_1015976221	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	QYAYVTHPNVLVDQGATVAVLPANPLRAFVYCIIASPRKGDALAPSAVTMGSPAAGVPVYFPDRPPKPWANSGEVWVFSDQVALISCTELVNRRKASRTSAAPSPNKQNPM*
Ga0070707_1009167821	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VRRKARIPVSPMNRPPTLHLAFAALLLTLGEAHAQYAYVTHPNVLVEQRATVAVLPANPLRAFAYCVIASPGKGEPLAPSVVRMGDATRGVPVQYPDRPPKFWASTGEVWVYSDQVALISCTELVRRQKR*
Ga0070699_1020422191	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GQRGYPVSPMNRPPTLHLAFAALLLTLGEAHAQYAYVTHPNVLVEQRATVAVLPANLLRAFAYCVIASPGKGEPVAPSVVSMGDATRSVPVQYPDRPPKFWASTGEVWVYSDQVALISCTELVRRQKR*
Ga0070735_1000585911	3300005534	Surface Soil	VHGVLMNISRSLLLTSAGVLLTLGNAHAQYVYVTHPDVVVESRATVAVLPANPFRVFVYCTIASPKKGEPFAPSVVTMGDATSAVAVQYPDRRPQPWGNAGKVWVFSDEAALVSCTEFVRRTSSRGSKE*
Ga0070761_101764362	3300005591	Soil	ITGNHPVLPANPLRAFVYCVIASPGKGEPLAPSVVTMGDATTGVAVHYPDRPPQLWGSTGMVWVFSDQTALISCTELAIPPYRTPLHGGTN*
Ga0070761_105011102	3300005591	Soil	MAHQLIEGLRILLLALAVQLLSLGKAHAQYAYVTHPNVLVDQGATVAVLPANPLRAFVYCIIASPRKGDALAPSAVTMGSPAAGVPVYFPDRPPKAWANSGEVWVFSDQVALISCTELVNRRKASRTSAAPSPNKQNPM*
Ga0068856_1000466123	3300005614	Corn Rhizosphere	MVLMNISRSLLLASVAIFLTFGKAHAQYVYVTHPDVVVESQATVAVLPANPLRVFVYCTIASPKRGEPFAPSVVTMGDAASAVAIQYPDRRPQPWGNAGKLWVFSDEAALVSCTELVRRTGSGSKK*
Ga0070717_118901291	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	DEIVVRILDVVHWQIGRGGGWNGMAHQLIEGLRILLLALAVQLLSLGKAHAQYAYVTHPNVLVDQGATVAVLPANPLRAFVYCIIASPRKGDALAPSAVTMGSPAAGVPVYFPDRPPKPWANSGEVWVFSDQVALISCTELVNRPKASRTSAAPSPNKQNPM*
Ga0075026_1010842641	3300006057	Watersheds	SEMSRPRVFLLALAVLCLMLGKAHAQYAYVTHPDALVESRATTAVLPANPYRAFVYCVIASPRKGEPLAPSVVTMGNATTGVLVQYPDRPAKLWGNTGTVWVFSDQTALISCTELVIPPYRTPQHGGTS*
Ga0070715_109256221	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	PGYSSFMNRPRTLLLAFAALFLTLGEAHAQYAYVKHPDAVVQQGATTVLPANPFRAFVYCVIASPGKGEPLAPSVVRMGDATRGVPVQYPDRPPKFWASTGEVWVYSDQVALISCTELVRRQKR*
Ga0070712_1006196742	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNISRSLLLTSAAIFLTFGNAHAQYAYVTHPDVVVEPQATVAVLPANPFRVFVYCTIASPKKGEPFAPSVVTMGNATSAVAVQYPDRRPQPWGNAGKVWVFSDQAALVSCTELVRRTGRGSKE*
Ga0070765_1006768671	3300006176	Soil	MNISRSLLLTSAAIFLTFGNAHAQYAYVTHPDVVVESQTTVAVLPANPFRVFVYCTIASPKKGDPFAPSVVTMGNATSAVAIQYPDRRPQPWGNAGKVWVFSDQAALVSCTELVRRTGRGSKE*
Ga0073928_10000070140	3300006893	Iron-Sulfur Acid Spring	MLGKAHAQYAYVTHPDALVESRATTAVLPANPYRAFVYCVIASPHKGEPLAPSVVRMGNATTGVLVQYPDRPAKLWGNTGTVWVFSDQTALISCTELVIPPYRTPQHGGTS*
Ga0073928_1000100524	3300006893	Iron-Sulfur Acid Spring	VNRRRILLLELAAVFLTLGKAHAQYAYVTHPNALVNQRATTAVLPANPLRAFVYCVIASPGKGQPLAPSVVTMGDATTDVLVQYPDRPPQLWGNTGAVRVFSDQTALISCTELAIPPYRTPQHGGTR*
Ga0099830_104877221	3300009088	Vadose Zone Soil	MSRPRVFLLALAVLCLMLGKAHAQYAYVTHPDALVESRATTAVLPANPYRAFVYCVIASPHKGEPLAPSVVTMGNATTGVLVQYPDRPAKLWGNTGTVWVFSDQTALISCTELVIPPYRTPQHGGTS*
Ga0099792_109665911	3300009143	Vadose Zone Soil	DRLQYSMNRLRISILALAALFLTLGKARAQYAYVTSNAVVEQRATTAVLPANPLRAFVYCVIASPRKGEPLAPSVVKMGNATTGVLVQYPDRPAKLWGNTGTVWVFSDQTALISCTELVIPPYRTPQHGGTS*
Ga0126373_115839021	3300010048	Tropical Forest Soil	VVQLLSHGNAHAQYAYVTHPNVLVEKGATVAVLPANPLREFVYCTIASPAKGETLAPSVVTMGDSVSGVPVYFPDRPPKPWANSDEVWVYSAQIALISCTELLHRRKAAR*
Ga0074044_103010711	3300010343	Bog Forest Soil	MSRPRVFLLALAVLCLMLGKARAQYAYVTHRGALVESRATTAVLPANPFRAFVYCVIVSPGKGEPLAPSVVTMGDATTGVAVHYPDRPPQLWGNTGMVWVFSDQTALISCTELAIPPYRTPRHDGTS*
Ga0126372_115917751	3300010360	Tropical Forest Soil	MGPMGDRILVLALAVQLVSLGRAHAQYSYVKHSNVLVEQGATVAVLPANPLREFVYCTIASPAKGETLAPSVVTMGDSVSGVPVYFPDRPPKPWANSDEVWVYSDQVALISCTELEKRRPGPSQDKPKP*
Ga0126381_1001301866	3300010376	Tropical Forest Soil	MNGLRILFLGVVVQLLSQGNAHAQYAYVTHPNVLVEKGATVAVLPANPLREFVYCTIASPAKGETLAPSVVTMGDSVSGVPVYFPDRPPRPWANSDEVWVYSDQVALISCTELEKRRPGPSQDKPKP*
Ga0126381_1007279141	3300010376	Tropical Forest Soil	MSFEYCCSRLQFSFYGFGKAHAQYSYMKHSNLLVEKGATVAVLPANPLRAYVYCTIASPGKSDALAPSVVTMGNSTIAVPVHFPDRRPQLWANSGEVWVYSDQIALISCTELVHKRKAAPASAAPPSDKQNPM*
Ga0136449_10001749528	3300010379	Peatlands Soil	MLGKARAQYAYVTHRGALVESRATTAVLPANPFRAFVYCVIVSPGKGEPLAPSVVTMGDATTGVAVHYPDRPPQLWGNTGMVWVFSDQTALISCTELAIPPYRTPRHDGTS*
Ga0136449_1004429232	3300010379	Peatlands Soil	MSRLRTPLLAFSVLFLTLEGAYPQYAYVTHLVAVVEQGATIAVLPANPLRAFVYCVIASPGKDEPLAPSVVRMGGATTGVRVQYPDNPPQLWGNTGEVWVFSDQIALISCTELVRR*
Ga0136449_1020909561	3300010379	Peatlands Soil	MNRSRISLLAFAALFFALGTARAQYAYVGNPDGLVGESATTAVLPANPLRAFVYCIIASPGKGEPLAPSVVIMGDATIGVPIQHSDRPPPLWGNTGKVWIFSDQIALISCTELVRRRKLGRTSGTAPSPDMPGARTGRNP
Ga0134126_124519831	3300010396	Terrestrial Soil	PDVVVESQATVAVLPANPFRVFVYCTIASPKKGEPFAPSVVTMGDATSAVAVQYPDRSPQPWGNAGKVWVFSDEAALVSCTEFVRRTSMGSKE*
Ga0137392_100768922	3300011269	Vadose Zone Soil	MLGKAHAQYAYVTHPDALVESRATTAVLPANPYRAFVYCVIASPRKGEPLAPSVVTMGNATTGVLVQYPDRPAKLWGNTGTVWVFSDQTALISCTELVIPPYRTPQHGGTR*
Ga0137391_100774522	3300011270	Vadose Zone Soil	MSRPRVFLLALAVLCLMLGKAHAQYAYVTHPDALVESRATTAVLPANPYRAFVYCVIASPRKGEPLAPSVVTMGNATTGVLVQYPDRPAKLWGNTGTVWVFSDQTALISCTELVIPPYRTPQHGGTS*
Ga0137391_106763052	3300011270	Vadose Zone Soil	LPFWHRRRRDSQDAARMPPGYSNSMDRPRALLLAFPALFLTLGKARAQYGYVTSNAVVEQRATTAVLPANPLRAFVYCVIASPGKGEALAPSAVRMGDATRGVPVQYPDRPPKFWASTSELWVFSDQTALISCTELVRLRKR*
Ga0137393_101491552	3300011271	Vadose Zone Soil	MLGKAHAQYAYVTHPDALVESRATTAVLPANPYRAFVYCVIASPRKGEPLAPSVVTMGNATTGVLVQYPDRPAKLWGNTGTVWVFSDQTALISCTELVIPPYRTPQHGGTS*
Ga0153922_10659721	3300012181	Attine Ant Fungus Gardens	MSRPRVFLLALAVLCLMLGKAHAQYAYVTHPDALVESRATTAVLPANPYRAFVYCVIASPHKGEPLAPSVVRMGNATTGVLVGYPDRPAKLWGNTGTVRVFSDQTAMISCTELVIPPYRTPQHGGTS*
Ga0137388_112276131	3300012189	Vadose Zone Soil	YSNSMNRPRILLLALAAVFLTLGKARAQYAYVTSNAVVEQRATTAVLPANPLRAFVYCVIASPGKGELLAPSVVKMGDATTGVPVQYPDRPPKLWASTSKVWVFSDQTALISCTELVRKQNLGSAPKTAPAPVRR*
Ga0137362_107687701	3300012205	Vadose Zone Soil	LLVSLATLLLTLGNAHAQYVYVKHSEVLVKQGATTAVLPANPLRAFVYCVIASPGKGEPLAPSVVTMGDATTGVAVHYLDHPPQLWANTGAVWVFSDQVALISCTELVIPPQRKTNPTG*
Ga0137362_110177512	3300012205	Vadose Zone Soil	DALVEQGASIAVLPTNPLRAFVYCVIASPGKNEPLAPSVVTMGDAITGVPVQYPGRPPKLWGSTGKVWVFSDQTALISCTELTVPPYRKPQHGGSS*
Ga0137360_111721911	3300012361	Vadose Zone Soil	MLGKAHAQYAYVTHPDALVESRATTAVLPANPYRAFVYCVIASPRKGEPLAPSVVTMGNATTGVLVQYPDRPAKLWGNTGAVWVFSDQTALISCTELVIPPYRTPQHGGTS*
Ga0137390_108733901	3300012363	Vadose Zone Soil	AWKPSGYSSSMNRPRTLLLALAALFLTLGEAHAQYAYVTHPGAVVEQGATTALLPANPFRAFVYCVIASPGKGEPLAPSVVTMGDTTTGVPVQYPDGPPKLWASTGEVWVFSDQTALISCTELVRKQNLGSAPKTAPAPVRR*
Ga0137397_107637701	3300012685	Vadose Zone Soil	LAFAALLLTLGEAHAQYAYVTHPNVLVEQRATVAVLPANPLRAFVYCVIASPGKGQPLAPSVVTMGDAITGVAVHYPDHRPQLWGNTGAVWVYSDQVALISCTELVRRQKR*
Ga0137394_114055881	3300012922	Vadose Zone Soil	MPSGYSNSMNRPRTLLLALATLFLTLGEAHAQYAYVTHHNVLVEQRATVAVLPANPLRAFAYCVIASPGKGQPLAPSVVTMGDAITGVAVHYPDHRPQLWGNTGAVWVYSDQVALISCTELVRRQKR*
Ga0137407_103695981	3300012930	Vadose Zone Soil	MNRPPTLRLAFAALLLTLGEAQYAYITHPNVLVEQRATVAVLLANPLRAFVYCVIASPGKGQPLAPSVVTMGDAITGVAVHYPDHRPQLWGNTGAVWVYSDQVALISCTELVRRQKR*
Ga0164303_106141121	3300012957	Soil	LLLAFPALFLTLGEAHAQYAYITRSKVLVEQHATVAVLSANPLRAFAYCVIASPDKGQPLAPSVVRMGDATRGVPVQYPDRRPQSWASTGEVWVYSDQVALISCTELVRRQKR*
Ga0157369_107308382	3300013105	Corn Rhizosphere	HAQYVYVTHPDVVVESQATVAVLPANPLRVFVYCTIASPKRGEPFAPSVVTMGDAASAVAIQYPDRRPQPWGNAGKLWVFSDEAALVSCTELVRRTGSGSKK*
Ga0182018_101814231	3300014489	Palsa	MSGAVHTQYAYVTHPDAVVERNAITAVMPANPFRAFYCVIASPGKNEPLAPFVVKMGNPTTGSVPVQYPDRPPQLWGSTGSVWIFSDQLALISCTELAIPPYRMAQHGGTG*
Ga0182024_106703281	3300014501	Permafrost	MSGAVHAQYAYVTHPDAVVERNAITAVMPANPFRAFSCVIASPGKNEPLAPFVVKMGNPTTGSVPVQYPDRPPQLWGSTGSVWIFSDQLALISCTELAIPPYRMAQHGGTG*
Ga0137403_104601121	3300015264	Vadose Zone Soil	MNRPPTLRLAFAALLLTLGEAQYAYITHPNVLVEQRATVAVLLANPLRACVYCVIASPGKGEPLAPSVVTMGDAITRVPVQYPDRPPKLWGSTAEVWVSSDQTALI
Ga0182036_103528821	3300016270	Soil	MNGRILLLTLSLQLLTLGTAHAQYTYLRHPAVLVEQGATVAVLPANPRRAFVYCVITSPSKGEAFAPLTVVAGNATTGVPVSYPDRVPQLWGNSGEVWVFSDQNALISCTELVRRTAKRQ
Ga0182033_114932461	3300016319	Soil	MAHQLINGLRILSLALAVQLVSLAKAHAQYAYVTHPDALVDQGVTVAVLPANPLRAFVYCTIASPRKGDALAPSVVTMGNATSGVLVYFPDRPAKPWANSGEVWVSSDQAALISCTELVDRRKASRT
Ga0182037_101093762	3300016404	Soil	MAHRLMNGLRILFFVLAVQLLSLGKAHAQYAYVTHPNVLVDQGATVAVLPPNPLRTFVCTIASPRKGDTLAPSVVTMGNATTGVPVYFPDRPAKPWANSGEVWVSSDQAALISCTELVDRRKASRTSAAPSPDKENPM
Ga0182039_107456052	3300016422	Soil	MAHRLMNGLRILFFVLAVQLLSLGKAHAQYAYVTHPNVLVDQGATVAVLPANPLRAFVYCTIASPRKGDTLAPSVVTMGNATTGVPVYFPDRPAKPWANSGEVWVSSDQAALISCTELVDRRKASRTSAAPSPDKQNPM
Ga0187802_101347101	3300017822	Freshwater Sediment	MAHQLIEGLRILLLALAVQLLSLGKAHAQYAYVTHPNVLVDQGATVAVLPANPPRAFVYCIIASPRKGDALAPSAVTMGSPAAGVPVYFPDRPPKPWANSGEVWVFSDQVALISCTELVNRRKASRTSAAPSPNKQNPM
Ga0187824_100478331	3300017927	Freshwater Sediment	VHGVLMNISRSLLLTSAGVLLTLGNAHAQYVYVTHPDVVVESRATVAVLPANPFRVFVYCTIASPKKGEPFAPSVVTMGDATSAVAVQYPDRRPQPWGNAGKVWVFSDEAALVSCTEFVRRTSSRGSKE
Ga0187821_100622522	3300017936	Freshwater Sediment	MNISRSLLLTSAGVLLTLGNAHAQYVYVTHPDVVVESRATVAVLPANPFRVFVYCTIASPKKGEPFAPSVVTMGDATSAVAVQYPDRRPQPWGNAGKVWVFSDEAALVSCTEFVRRTSSRGSKE
Ga0187779_100296963	3300017959	Tropical Peatland	MHGRILLLTLALQLLTLGTAHSQYAYVRHPAVLVQQGATVAVLPANPLRAFVYCVITSPSKGEAFAPSIVILGNATTGVPISYPDRAPQLWGNSGDVWVFSDQIALISCTEFVRRTAKRL
Ga0187778_102650562	3300017961	Tropical Peatland	VAHQLMNGLRILLLALAVQLLSLGKAHAQYAYVKHPNVLVDQGATIAVLPANPLRAYVYCVIASPGKGETLAPSVVTMGNGTLAVPVYFSDRRPQLWASSDEVWVYSDQTALISCTELVEKRRADPSQDKQKPIM
Ga0187780_106652001	3300017973	Tropical Peatland	MHGRILLLTLALQLLTLGTAHSQYAYLRHPAVLVQQGATVAVLPANPLRAFVYCVITSPSKGEAFAPSIVILGNATTGVPISYPDRAPQLWGNSGDVWVFSDQIALISCTEFVRRTAKRL
Ga0187777_100528142	3300017974	Tropical Peatland	MHGRILLLTLALQLLTLGTAHSQYAYLRHPAVLVQQGATVAVLPANPLRAFVYCVITSPSKGEAFAPSIVILGNATAGVPISYPDRAPQLWGNSGDVWVFSDQIALISCTEFVRRTAKRL
Ga0187816_105685571	3300017995	Freshwater Sediment	DEIVVRILDVVHWQIGRGGGWNGMAHQLIEGLRILLLALAVQLLSLGKAHAQYAYVTHPNALVDQGATVAVLPANPLRAFVYCIIASPRKGDALAPSAVTMGSPAAGVPVYFPDRPPKPWANSGEVWVFSDQVALISCTELVNRRKASRTSAAPSPNKQNPM
Ga0187815_104998531	3300018001	Freshwater Sediment	GRARAQYVYVKHPEVLVKQGATAVLPANPLRAFVYCVIASPGKGDPLAPSVVTMGNATTGVAVHYPDHPPQFWANTGGVWVFSDQVALISCTELAIPPQRKTNPTG
Ga0187810_104061952	3300018012	Freshwater Sediment	SRLRILLVSFATLFLTLVRAREQYVYVKHPEVLVRQGATAVLPANPLRAFVYCVIASPGKCDPLAPSVVTMGDATTDVAVHYPDHPPQFWANTGGVWVFSDQVALISCTELAIPPQRKTNPTG
Ga0187766_102888611	3300018058	Tropical Peatland	VGEDGTGVAHQLMNGLRILLLALAVQLLSLGKAHAQYAYVKHPNVLVDQGATIAVLPANPLRAYVYCVIASPGKGETLAPSVVTMGNGTLAVPVYFSDRRPQLWASSDEVWVYSDQTALISCTELVEKRRADPSQDKQKPMM
Ga0187769_114676571	3300018086	Tropical Peatland	YAYVKHPNVLVDQGATIAVLPANPLRAYVYCVIASPGKGETLAPSVVTMGNGTLAVPVYFSDRRPQLWASSDEVWVYSDQTALISCTELVEKRRADPSQDKQKPIM
Ga0210403_111941311	3300020580	Soil	MAHQLIEGLRILLLALAVQLLSLGKAHAQYAYVTHPNVLVDQGATVAVLPANPLRAFVYCIIASPRKGDALAPSAVTMGSPAAGVPVYFPDRPPKPWANSGEVWVFSDQVALISCTELVNRRKASRTSAAPSPNKQNPM
Ga0210401_101718102	3300020583	Soil	MSRPRVFLLALAVLCLMLGKAHAQYAYVTHPDALVESRATTAVLPANPYRAFVYCVIASPRKGEPLAPSVVTMGNATTGVLVQYPDRPAKLWGNTGTVWVFSDQTAMISCTELVIPPYRTPQHGGTR
Ga0215015_108604921	3300021046	Soil	MSRPRVFLLALAVLCLMLGKAHAQYAYVTHPDALVESRATTAVLPANPYRAFVYCVIASPRKGEPLAPSVVTMGNATTSVLVQYPDRPAKLWGNTGTVWVFSDQTALISCTELVIPPYRTPQHGGTS
Ga0210394_106106011	3300021420	Soil	MPPGYSISMDRPRALLLAFPALFLTLGEAHAQYAYITRSKVLVEQHATVAVLSANPLRAFVYCVIASPGKGEALAPSVVTMGDATTGVPVQYPDRPPKLWASTGEVWVFSDQTALISCTELVRKQNLGSASKTTPAPVRR
Ga0210394_115831451	3300021420	Soil	MSRPRVFLLALAVLCLMLGKAHAQYAYVTHPDALVESRATTAVLPANPYRAFVYCVIASPHKGEPLAPSVVRMGNATTGVLVGYPDRPAKLWGNTGTVWVFSDQTAMISCNEL
Ga0210390_106813971	3300021474	Soil	PLRAFVYCVIASPGKGQPLAPSVVTMGDATTDVLVQYPDRPPQLWGNTGAVRVFSDQTALISCTELAIPPYRTPQHGGTR
Ga0126371_104530662	3300021560	Tropical Forest Soil	ILVLALAVQLVSLGRAHAQYSYVKHSNVLVEQGATVAVLPANPLRAFVYCTIASPSKGETLAPSVVTMGNGTIAVPIYFPDRRPQLWANSGEVWVYSAQIALISCTELLHRRKAAR
Ga0126371_122924051	3300021560	Tropical Forest Soil	MNGLRILFLGVVVQLLSQGNAYAQYAYVTHPNVLVEKGATVAVLPANPLREFVYCTIASPAKGEAFAPSVVTMGDSVSGVPVYFPDRPPKPWANSDEVWVYSDQVALISCTEL
Ga0207684_112222411	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	QLLSLGKAHAQYAYVTHPNVLVDQGATVAVLPANPLRAFVYCIIASPRKGDALAPSAVTMGSPAAGVPVYFPDRPPKPWANSGEVWVFSDQVALISCTELVNRRKASRTSAAPSPNKQNP
Ga0209648_105251001	3300026551	Grasslands Soil	MSRPRVFLLALAVLCLMLGKAHAQYAYVTHPDALVESRATTAVLPANPYRAFVYCVIASPRKGEPLAPSVVTMGNATTGVLVQYPDRPAKLWGNTGTVWVFSDQTALISCTELVIPPYRTPQHGGTS
Ga0209580_102636502	3300027842	Surface Soil	LGNAHAQYVYVTHPDVVVESRATVAVLPANPFRVFVYCTIASPKKGDPFAPSVVTMGNATSAVAIQYPDRRPQPWGNAGKVWVFSDQAALVSCTELVRRTGRGSKE
Ga0209701_106761901	3300027862	Vadose Zone Soil	MSRPRVFLLALAVLCLMLGKAHAQYAYVTHPDALVESRATTAVLPANPYRAFVYCVIASPHKGEPLAPSVVTMGNATTGVLVQYPDRPPKLWASTSKVWVFSDQTALISCTELVRRQKRDRASETAPAPVR
Ga0209283_106395522	3300027875	Vadose Zone Soil	MNRPRILLLALAAVFLTLGKARAQYAYVTSNAVVEQRATTAVLPANPLRVFVYCIIASPGKGEPLAPSVVKMGDATTGVPVQYPDRPPKLWASTRKVWVFSDQTALISCTELVRRQKRDRASETAP
Ga0209380_102761881	3300027889	Soil	MPVPTENSESMEKSSDLLALAVQLLSLGKAHAQYAYVTHPNVLVDQGATVAVLPANPLRAFVYCIIASPRKGDALAPSAVTMGSPAAGVPVYFPDRPPKPWANSGEVWVFSNQVALISCTELVNRRKASRTSAAASPNKQNPM
Ga0209526_102613242	3300028047	Forest Soil	MAHQLIEGLRILLLALAVQLLSLGKAHAQYAYVTHLNVLVDQGATVAVLPANPLRAFVYCIIASPRKGDALAPSAVTMGSPAAGVPVYFPDRPPKPWANSGEVWVFSNQVALISCTELVNRRKASRTSAAPSPNKQNPM
Ga0308309_103983851	3300028906	Soil	MSGPVPTENSESMEKSSDLLALAVQLLSLGKAHAQYAYVTHPNVLVDQGATVAVLPANPLRAFVYCIIASPRKGDALAPSAVTMGSPAAGVPVYFPDRPPKPWANSGEVWVFSNQVALISCTELVNRRKASRTSAAASPNKQNPM
Ga0308309_105982371	3300028906	Soil	MNISRSLLLTSAAIFLTFGNAHAQYAYVTHPDVVVESQTTVAVLPANPFRVFVYCTIASPKKGDPFAPSVVTMGNATSAVAIQYPDRRPQPWGNAGKVWVFSDQAALVSCTELVRRTGRGSKE
Ga0222749_101939061	3300029636	Soil	ARMPPGYSISMDRPRALLLAFPALFLTLGEAHAQYAYITRSKVLVEQHATVAVLSANPLRAFVYCVIASPGKGEALAPSVVTMGDATTGVPVQYPDRPPKLWASTGEVWVFSDQTALISCTELVRKQNLGSASKTTPAPVRR
Ga0170824_1048133163	3300031231	Forest Soil	MRMSNTPGALVQLWATTAVLPANPLRAFVYCVIASPGKGEPLAPSVVTMGDATTGVPVQYPDRPPQVGGNAGAVWVFSDQTALISCTELAIPPYRKPQHGDTSQTEPSN
Ga0170818_1005762393	3300031474	Forest Soil	MRMSNTPGALVQLWATTAVLPANPLRAFVYCVIASPGKGEPLAPSVVTMGDATTGVPVQYPDRPLQVWGNTGAVWVFSDQTALISCTELAIPPYRKPQHGDTSQTEPSN
Ga0310915_111653841	3300031573	Soil	ILSLALAVQLVSLAEAHAQYAYVTHPNLLVDQGATVAVLPPNPLRTFVCTIASPRKGDTLAPSVVTMGNATTGVPVYFPDRPAKPWANSGEVWVSSDQAALISCTELVDRRKASRTSAAPSPDKENPM
Ga0310686_1008570952	3300031708	Soil	MERDGAPAYRRASNTVARACSSASIAWKSTAQYAYVTHPNVLVDLGASVAVLPANPLRAFVYCIIASPRKGDALAPSAVTMGSPAAGVPVYFPDRPPKPWANSGEVWVFSDQVALISCTELVNRRKASRTSAAPSPNKQNPM
Ga0310686_1110864581	3300031708	Soil	MSRPRVFLLALAVLCLMLGKAHAQYAYVTHPDALVESRATTAVLPANPYRACVYCVIASPHKGEPLAPSVVRMGNATTGVLVQYPDRPAKLWGNTGTVWVFSDQTALISCTELVIPPYRTPQHGGTR
Ga0310686_1120151711	3300031708	Soil	QYAYVTHPNALVNQRATTAVLPANPLRAFVYCVIASPGKGQPLAPSAVTMGDATTGVLVQYPDRPPRLWGNTGAVWVFSDQTALISCTELAIPPYRTPQHGGTR
Ga0310686_1134284494	3300031708	Soil	VYVKHSEVLIKQGATTAVLPANPLRAFVYCVIAIPGKGEPIAPSVVTMGDAITGVAVHYPDHRPQLWANRGAVWVFSDQVALISCTELAIPPQRKD
Ga0310686_1172734752	3300031708	Soil	MGRLRILPVSLAVLFLTLGNAHTQYVYVKHPEVLVKQGATTAVLPANPLRAFVYCVIASPGKGEPLAPSVVTMGDAITGVAVHYLDHPLQLWANTGVVWVFSDQIALISCTELAIPAQRKTNPTG
Ga0310686_1191837321	3300031708	Soil	MNRSRISLLAFAALFLALGKARAQYAYVTHPDVLVGESATTAVLPANPLRAFVYCMIASPGKGEPLAPSVVIMGDATIGVPIQHSDRPPPLWGNTGKVWIFSDQIALISCTELVRRRRLGLTSRTPPSPDMPGARTGRNPPKARPG
Ga0306917_106551351	3300031719	Soil	LRILSLALAVQLVSLAEAHAQYAYVTHPNLLVDQGATVAVLPANPLRAFVYCTIASPRKGDALAPSVVTMGNATSGVLVYFPDRPAKPWANSGEVWVSSDQVALISCTELVDRRKASRTSVAPSPDRQNSM
Ga0307475_107579791	3300031754	Hardwood Forest Soil	VEQHATVAVLSANPLRAFVYCVIASPGKGEALAPSVVTMGDATTGVPVQYPDRPPKLWASTGEVWVFSDQTALISCTELVRKQNLGSASKTTPAPVRR
Ga0310917_111701391	3300031833	Soil	AEAHAQYAYVTHPNLLVDQGATVAVLPPNPLRTFVCTIASPRKGDTLAPSVVTMGNATTGVPVYFPDRPAKPWANSGEVWVSSDQAALISCTELVDRRKASRTSAAPSPDKENPM
Ga0306925_104611592	3300031890	Soil	MAHQLINGLRILSLALAVQLVSLAKAHAQYAYVTHPDALVDQGVTVAVLPANPLRAFVYCTIASPRKGDALAPSVVTMGNATSGVLVYFPDRPAKPWANSGEVWVSSDQVALISCTELVDRRKASRTSAAPSPDKQNPM
Ga0306921_107560902	3300031912	Soil	MARQLMNGLRILSLALAVQLVSLAEAHAQYAYVTHPNLLVDQGATVAVLPPNPLRTFVCTIASPRKGDTLAPSVVTMGNATTGVPVYFPDRPAKPWANSGEVWVSSDQAALISCTELVDRRKASRTSAAPSPDKENPM
Ga0310912_103300422	3300031941	Soil	EAHAQYAYVTHPNLLVDQGATVAVLPPNPLRTFVCTIASPRKGDTLAPSVVTMGNATTGVPVYFPDRPAKPWANSGEVWVSSDQAALISCTELVDRRKASRTSAAPSPDKENPM
Ga0310909_103296691	3300031947	Soil	MARQLMNGLRILSLALAVQLVSLAEAHAQYAYVTHPNVLVDQGATVAVLPPNPLRTFVCTIASPRKGDTLAPSVVTMGNATTGVPVYFPDRPAKPWANSGEVWVSSDQAALISCTELVDRRKASRTSAAPSPDKENPM
Ga0306926_101357562	3300031954	Soil	MNGRILLLTLGLQLLILGTAHAQYTYLRHPAVLVEQGATVAVLPANPRRAFVYCVITSPSKGEAFAPLTVVAGNATTGVPVSYPDRVPQLWGNSGEVWVFSDQNALISCTELVRRTAKRQ
Ga0307479_104544131	3300031962	Hardwood Forest Soil	YAYITRSKVLIEQHATVAVLSANPLRAFVYCVIASPGKGEALAPSVVTMGDATTGVPVQYPDRPPKLWASTGEVWVFSDQTALISCTELVRKQNLGSASKTTPAPVRR
Ga0306922_109340982	3300032001	Soil	QLVSLAKAHAQYAYVTHPDALVDQGVTVAVLPANPLRAFVYCTIASPRKGDALAPSVVTMGNATSGVLVYFPDRPAKPWANSGEVWVSSDQVALISCTELVDRRKASRTSAAPSPDKQNP
Ga0306924_117730381	3300032076	Soil	MARQLMNGLRILSLALAVQLVSLAEAHAQYAYVTHPDALVDQGVTVAVLPANPLRAFVYCTIASPRKGDALAPSVVTMGNATSGVLVYFPDRPAKPWANSGEVWVSSDQVALISCTELVDRRKASRTSAAPSPDKQNPM
Ga0311301_100418958	3300032160	Peatlands Soil	MLGKARAQYAYVTHRGALVESRATTAVLPANPFRAFVYCVIVSPGKGEPLAPSVVTMGDATTGVAVHYPDRPPQLWGNTGMVWVFSDQTALISCTELAIPPYRTPRHDGTS
Ga0311301_118173272	3300032160	Peatlands Soil	MSRLRTPLLAFSVLFLTLEGAYPQYAYVTHLVAVVEQGATIAVLPANPLRAFVYCVIASPGKDEPLAPSVVRMGGATTGVRVQYPDNPPQLWGNTGEVWVFSDQIALISCTELVRR
Ga0311301_119756111	3300032160	Peatlands Soil	MAHQLIEGLRILLLALAVQLLSLGKAYAQYAYVTHPNVLVDQGATVAVLPANPLRAFVYCIIASPRKGDALAPSAVTMGSPAAGVPVYFPDRPPKPWANSGEVWVFSDQVALISCTELVNRRKASRTSAAPSPNKQNPM
Ga0335079_104231642	3300032783	Soil	MNSRILLLTLAVQLLTSGTAHSQYTYVRHPAVLVQQGATVAVLPANPLRAFVYCVITSPGKGEAFAPSIVTVGNATTGVPILYPDRAPCLWGNSGDVWVFSDQIALISCTELVRRSAKGR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089447

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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