Metagenome / Metatranscriptome Family F089452

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089452
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	72 residues
Representative Sequence	MNKILATLMIAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASAESN
Number of Associated Samples	94
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	35.78 %
% of genes from short scaffolds (< 2000 bps)	77.98 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.459 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds (7.339 % of family members)
Environment Ontology (ENVO)	Unclassified (41.284 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.541 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 15.15% β-sheet: 27.27% Coil/Unstructured: 57.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00211	Guanylate_cyc	7.41
PF13420	Acetyltransf_4	5.56
PF00583	Acetyltransf_1	4.63
PF13545	HTH_Crp_2	3.70
PF13191	AAA_16	2.78
PF06745	ATPase	2.78
PF02518	HATPase_c	2.78
PF04392	ABC_sub_bind	1.85
PF00043	GST_C	1.85
PF02798	GST_N	1.85
PF05787	DUF839	1.85
PF09351	DUF1993	1.85
PF01841	Transglut_core	1.85
PF13635	DUF4143	0.93
PF00027	cNMP_binding	0.93
PF09900	DUF2127	0.93
PF13401	AAA_22	0.93
PF14356	DUF4403	0.93
PF03704	BTAD	0.93
PF07719	TPR_2	0.93
PF13502	AsmA_2	0.93
PF13544	Obsolete Pfam Family	0.93
PF00536	SAM_1	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	7.41
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	1.85
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	1.85
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.85
COG3211	Secreted phosphatase, PhoX family	General function prediction only [R]	1.85
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.93
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
All Organisms	root	All Organisms	49.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
cellular organisms	root	All Organisms → cellular organisms	49.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8.26 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	3.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.83 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.67 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.75 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.75 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	0.92 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.92 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.75 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.83 %
Pseudorhodoferax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pseudorhodoferax	0.92 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.92 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.75 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.83 %
Nostoc	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	0.92 %
Pseudorhodoferax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pseudorhodoferax	0.92 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.75 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.83 %
unclassified Nostoc	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc	0.92 %
Pseudorhodoferax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pseudorhodoferax	0.92 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.75 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.83 %
Nostoc sp. 'Peltigera malacea cyanobiont' DB3992	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. 'Peltigera malacea cyanobiont' DB3992	0.92 %
Pseudorhodoferax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pseudorhodoferax	0.92 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_100059506	Not Available	885	Open in IMG/M
3300001305\|C688J14111_10058939	Not Available	1162	Open in IMG/M
3300004114\|Ga0062593_100099313	All Organisms → cellular organisms → Bacteria → Proteobacteria	2045	Open in IMG/M
3300004114\|Ga0062593_101061311	All Organisms → cellular organisms → Bacteria → Proteobacteria	837	Open in IMG/M
3300004156\|Ga0062589_100165477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1542	Open in IMG/M
3300004480\|Ga0062592_101393123	Not Available	667	Open in IMG/M
3300004643\|Ga0062591_102979898	Not Available	502	Open in IMG/M
3300004782\|Ga0062382_10091379	Not Available	1205	Open in IMG/M
3300005093\|Ga0062594_100187532	Not Available	1421	Open in IMG/M
3300005093\|Ga0062594_100371899	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300005183\|Ga0068993_10005214	All Organisms → cellular organisms → Bacteria → Proteobacteria	2618	Open in IMG/M
3300005328\|Ga0070676_10600367	Not Available	794	Open in IMG/M
3300005330\|Ga0070690_100795381	Not Available	733	Open in IMG/M
3300005334\|Ga0068869_100060600	All Organisms → cellular organisms → Bacteria → Proteobacteria	2773	Open in IMG/M
3300005338\|Ga0068868_100348873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1267	Open in IMG/M
3300005345\|Ga0070692_10059886	All Organisms → cellular organisms → Bacteria → Proteobacteria	2003	Open in IMG/M
3300005356\|Ga0070674_101526464	Not Available	601	Open in IMG/M
3300005364\|Ga0070673_101748519	Not Available	589	Open in IMG/M
3300005537\|Ga0070730_10030108	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	4107	Open in IMG/M
3300005545\|Ga0070695_101040319	Not Available	668	Open in IMG/M
3300005578\|Ga0068854_100814653	Not Available	815	Open in IMG/M
3300005617\|Ga0068859_100097642	All Organisms → cellular organisms → Bacteria → Proteobacteria	2991	Open in IMG/M
3300005617\|Ga0068859_100865251	All Organisms → cellular organisms → Bacteria → Proteobacteria	990	Open in IMG/M
3300005829\|Ga0074479_10356791	Not Available	733	Open in IMG/M
3300005836\|Ga0074470_10039995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1641	Open in IMG/M
3300005836\|Ga0074470_11669602	Not Available	653	Open in IMG/M
3300005836\|Ga0074470_11708926	All Organisms → cellular organisms → Bacteria	2241	Open in IMG/M
3300006041\|Ga0075023_100012936	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2198	Open in IMG/M
3300006047\|Ga0075024_100022405	All Organisms → cellular organisms → Bacteria → Proteobacteria	2557	Open in IMG/M
3300006057\|Ga0075026_100239578	Not Available	969	Open in IMG/M
3300006163\|Ga0070715_10670090	Not Available	616	Open in IMG/M
3300006172\|Ga0075018_10011198	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3328	Open in IMG/M
3300006174\|Ga0075014_100134200	Not Available	1193	Open in IMG/M
3300006881\|Ga0068865_100244826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1412	Open in IMG/M
3300006931\|Ga0097620_100035308	All Organisms → cellular organisms → Bacteria	5017	Open in IMG/M
3300009092\|Ga0105250_10398265	Not Available	610	Open in IMG/M
3300009098\|Ga0105245_11762426	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300009148\|Ga0105243_10028974	All Organisms → cellular organisms → Bacteria → Proteobacteria	4255	Open in IMG/M
3300009174\|Ga0105241_10745581	Not Available	898	Open in IMG/M
3300009551\|Ga0105238_11574700	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300010375\|Ga0105239_11195399	Not Available	876	Open in IMG/M
3300010397\|Ga0134124_13228573	Not Available	500	Open in IMG/M
3300010400\|Ga0134122_10480062	All Organisms → cellular organisms → Bacteria → Proteobacteria	1119	Open in IMG/M
3300010401\|Ga0134121_10246472	Not Available	1562	Open in IMG/M
3300010880\|Ga0126350_10856327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1113	Open in IMG/M
3300011119\|Ga0105246_11804919	Not Available	584	Open in IMG/M
3300011431\|Ga0137438_1005067	All Organisms → cellular organisms → Bacteria	3657	Open in IMG/M
3300011431\|Ga0137438_1253965	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300011442\|Ga0137437_1063032	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300012212\|Ga0150985_104416986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. 'Peltigera malacea cyanobiont' DB3992	628	Open in IMG/M
3300012212\|Ga0150985_115192652	Not Available	791	Open in IMG/M
3300012212\|Ga0150985_117626067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1082	Open in IMG/M
3300012469\|Ga0150984_104397370	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012469\|Ga0150984_118788281	All Organisms → cellular organisms → Bacteria	1892	Open in IMG/M
3300012469\|Ga0150984_119715460	Not Available	783	Open in IMG/M
3300012685\|Ga0137397_10747209	Not Available	726	Open in IMG/M
3300012922\|Ga0137394_11337422	Not Available	578	Open in IMG/M
3300012944\|Ga0137410_10833045	Not Available	777	Open in IMG/M
3300012944\|Ga0137410_11541373	Not Available	581	Open in IMG/M
3300013297\|Ga0157378_10410597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1336	Open in IMG/M
3300013306\|Ga0163162_10658348	Not Available	1171	Open in IMG/M
3300013308\|Ga0157375_10195356	All Organisms → cellular organisms → Bacteria → Proteobacteria	2178	Open in IMG/M
3300014969\|Ga0157376_10909958	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300015195\|Ga0167658_1104722	Not Available	596	Open in IMG/M
3300015245\|Ga0137409_10368178	Not Available	1250	Open in IMG/M
3300017792\|Ga0163161_10973380	Not Available	723	Open in IMG/M
3300017965\|Ga0190266_10578617	Not Available	674	Open in IMG/M
3300018083\|Ga0184628_10030703	All Organisms → cellular organisms → Bacteria → Proteobacteria	2680	Open in IMG/M
3300018084\|Ga0184629_10205936	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300018476\|Ga0190274_10033631	All Organisms → cellular organisms → Bacteria → Proteobacteria	3534	Open in IMG/M
3300020580\|Ga0210403_10431130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1075	Open in IMG/M
3300021081\|Ga0210379_10302284	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300025899\|Ga0207642_10261340	Not Available	987	Open in IMG/M
3300025907\|Ga0207645_10226791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1232	Open in IMG/M
3300025908\|Ga0207643_10020560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pseudorhodoferax	3623	Open in IMG/M
3300025918\|Ga0207662_10509269	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300025924\|Ga0207694_11293552	Not Available	617	Open in IMG/M
3300025927\|Ga0207687_11375757	Not Available	607	Open in IMG/M
3300025930\|Ga0207701_10746280	Not Available	827	Open in IMG/M
3300025934\|Ga0207686_11421148	Not Available	571	Open in IMG/M
3300025936\|Ga0207670_10076114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2334	Open in IMG/M
3300025937\|Ga0207669_11706449	Not Available	538	Open in IMG/M
3300025938\|Ga0207704_10462176	Not Available	1015	Open in IMG/M
3300025961\|Ga0207712_10814136	Not Available	822	Open in IMG/M
3300026018\|Ga0208418_1036062	Not Available	530	Open in IMG/M
3300026035\|Ga0207703_11434219	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300026118\|Ga0207675_100008482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9681	Open in IMG/M
3300027840\|Ga0209683_10232474	Not Available	847	Open in IMG/M
3300027910\|Ga0209583_10004610	All Organisms → cellular organisms → Bacteria	3886	Open in IMG/M
3300027910\|Ga0209583_10076515	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300027915\|Ga0209069_10056475	All Organisms → cellular organisms → Bacteria → Proteobacteria	1851	Open in IMG/M
3300030596\|Ga0210278_1027673	Not Available	936	Open in IMG/M
3300030997\|Ga0073997_12019572	Not Available	816	Open in IMG/M
3300030998\|Ga0073996_12255500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	653	Open in IMG/M
3300031231\|Ga0170824_121091802	Not Available	616	Open in IMG/M
3300031740\|Ga0307468_100029608	All Organisms → cellular organisms → Bacteria	2586	Open in IMG/M
3300031740\|Ga0307468_100127972	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1580	Open in IMG/M
3300031740\|Ga0307468_101888382	Not Available	568	Open in IMG/M
3300031834\|Ga0315290_10006355	All Organisms → cellular organisms → Bacteria → Proteobacteria	8658	Open in IMG/M
3300031834\|Ga0315290_10006355	All Organisms → cellular organisms → Bacteria → Proteobacteria	8658	Open in IMG/M
3300031997\|Ga0315278_11166509	Not Available	758	Open in IMG/M
3300032143\|Ga0315292_11371210	Not Available	576	Open in IMG/M
3300032157\|Ga0315912_10271202	All Organisms → cellular organisms → Bacteria → Proteobacteria	1336	Open in IMG/M
3300032256\|Ga0315271_11844513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	518	Open in IMG/M
3300032397\|Ga0315287_10810240	Not Available	1101	Open in IMG/M
3300032954\|Ga0335083_11557762	Not Available	500	Open in IMG/M
3300034281\|Ga0370481_0406824	Not Available	503	Open in IMG/M
3300034354\|Ga0364943_0368966	Not Available	551	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.30%
Host-Associated	Host-Associated	36.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	37.61%
Plants	Host-Associated → Plants	36.70%
Aquatic	Environmental → Aquatic	25.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	36.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.51%
Sediment	Environmental → Aquatic → Sediment	15.60%
Freshwater	Environmental → Aquatic → Freshwater	8.26%
Marine	Environmental → Aquatic → Marine	1.83%
Floodplain	Environmental → Terrestrial → Floodplain	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.34%
Loam	Environmental → Terrestrial → Soil → Loam	6.42%
Lake	Environmental → Aquatic → Freshwater → Lake	5.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.42%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.92%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.42%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.59%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.67%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.75%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.92%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.92%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.92%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.92%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.92%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.92%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026018	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030596	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO085SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300034281	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1000595062	3300001213	Wetland	MSKILNTLLIAAALSSTGAFAEDKFHVSMENGKQRIDFSLNGNDKCVIINDKITCQPAQKTPVHVASSEAN*
C688J14111_100589392	3300001305	Soil	MNKIYSGLILAAILTSTSALAEDTLRVSMQDGKQRVDFSLYGNGKCVMIDDKITCQPAPQPPVRVASSESK*
Ga0062593_1000993134	3300004114	Soil	MNKILATLLITAALSSASAFAEDRLRVSQQDGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE*
Ga0062593_1010613112	3300004114	Soil	MNKILATLMIAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASAESN*
Ga0062589_1001654772	3300004156	Soil	MKKILTTLAIAAVLSGTGAFAEDRLHVSMENGKQRVDFSLNGNDKCAMVDDKITCAPMPKAPLRVASSESN*
Ga0062592_1013931232	3300004480	Soil	VKFLQHETNLEEHDMNKILATLMIAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASAESN*
Ga0062591_1029798981	3300004643	Soil	MNKILATLMIAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCAMVDDKITCAPMPKAPLRVASSESN*
Ga0062382_100913792	3300004782	Wetland Sediment	MNKILSTLVIAAALSSSTAFAEDTLRVSMENGKQRVDFSLNGNNKCVMIDDKIVCAPMPRTPVRVASSDYN*
Ga0062594_1001875323	3300005093	Soil	MNKILATLLITAALSSTSAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE*
Ga0062594_1003718993	3300005093	Soil	MKKILTTLAITAVLSSTGAFAEDRLHVSMENGKQRVDFSLNGNDKCVLIDDKIVCAPMPKAPLRVASSESN*
Ga0068993_100052142	3300005183	Natural And Restored Wetlands	MNKILATLLIATTLSSGSAFAEDRLRVSMENGKQRVDFSLNGNDKCVMIDDKIICAPMPKEPVHVASSESN*
Ga0070676_106003671	3300005328	Miscanthus Rhizosphere	MNKILATLIVAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASAESN*
Ga0070690_1007953811	3300005330	Switchgrass Rhizosphere	MNKILSSLILAAVLASTSALAEDTLRVSMQDGKQRVDFSLNGKGKCVMIDDKITCQPLQQPRVRVASSESR*
Ga0068869_1000606003	3300005334	Miscanthus Rhizosphere	MNKILTALLIAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASAESN*
Ga0068868_1003488731	3300005338	Miscanthus Rhizosphere	VAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASAESN*
Ga0070692_100598863	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	IAAALSSATAFADDTLRTSMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASAESN*
Ga0070674_1015264642	3300005356	Miscanthus Rhizosphere	FRNVKFLQHETLLEEQIMNKILATLLITAALSSTSAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE*
Ga0070673_1017485191	3300005364	Switchgrass Rhizosphere	MNKILSSLILAAVLASTSAFAEDTLRVSMQDGKQRVDFSLNGRGKCVMIDDKITCQPMPQPRVRVASSESK*
Ga0070730_100301082	3300005537	Surface Soil	MNKMLTTLLIAAALFSANAVAEDTLRVSMQNGKKRIDFSLNGNDKCVMIDDKITCLPMPKEPVRVASTESK*
Ga0070695_1010403191	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MNKILATLMVAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASAESN*
Ga0068854_1008146532	3300005578	Corn Rhizosphere	MNKILATLIVAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCAMVDDKITCAPMPKAPLRVASSESN*
Ga0068859_1000976423	3300005617	Switchgrass Rhizosphere	MNKILATLIVAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIEDKITCAPMKQAPVRVASAESN*
Ga0068859_1008652511	3300005617	Switchgrass Rhizosphere	FLQHETLLEEQIMNKILATLLITAALSSTSAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE*
Ga0074479_103567912	3300005829	Sediment (Intertidal)	MNKILAALLIAAALSSTNAFAEDKFRVTMENGKPRIDFSLNGNGKCVIIDDKIHCAPMPKTPVRVASFESN*
Ga0074470_100399953	3300005836	Sediment (Intertidal)	MNKIFATLLIATALSSGSAFAEDRLRVSMENGKQRVDFSLNGNDKCVMIDDKIICAPMPKEPVHVASSESN*
Ga0074470_116696021	3300005836	Sediment (Intertidal)	MEEQIMNKILSTLLIAATLTGATAFAEDNKLRVSIQNGKQRVDFSLNGNDKCVMVDDKITCAPMKQAPIRVASSTSN*
Ga0074470_117089262	3300005836	Sediment (Intertidal)	MNKIFATLLIAAALSSTGAFAEDKFRVTVENGKPRIDISLNGNDKCVMIDDKIVCAPMLEDRMRVASSESN*
Ga0075023_1000129363	3300006041	Watersheds	MNKILSTLLIAAVLSSASAFAEDTLHVSMENGNKRVDFSLNGNDKCVMIDDKITCAPMPKAPIRVASSESN*
Ga0075024_1000224055	3300006047	Watersheds	MNKILSTLLIAAVLSSASAFAEDTLHVSMENGKKRVDFSLNGNDKCVMIDDKITCAPMPK
Ga0075026_1002395782	3300006057	Watersheds	MNKILGTLLIAAVLSSFSAFAEDSLRVSMENGKKRVDFSLNGNDRCVMVDDKIHCEPMPVKPIRLASSASN*
Ga0070715_106700902	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MNKILATLLITAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASAESN*
Ga0075018_100111982	3300006172	Watersheds	MNKILSTLLIAAVLSSASAFAEDTLHVSMENGKKRVDFSLNGNDKCVMIDDKITCAPMPKAPIRVASSESN*
Ga0075014_1001342001	3300006174	Watersheds	MNKILSTLLIAAVLSSASAFAEDTLRVSMENGKKRVDFSLNGNDKCVMIDDKITCQPM
Ga0068865_1002448263	3300006881	Miscanthus Rhizosphere	NKILATLIVAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASAESN*
Ga0097620_1000353083	3300006931	Switchgrass Rhizosphere	MKKILTTLAITAVLSSTGAFAEDRLHVSMENGKQRVDFSLNGNDKCVLMDDKIVCAPMPKAPLRVASSESN*
Ga0105250_103982651	3300009092	Switchgrass Rhizosphere	RQDFTAPPSPPNVKFLQHETNLEEHDMNKILATLMIAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASSSNE*
Ga0105245_117624261	3300009098	Miscanthus Rhizosphere	IMNKILATLLITAALSSTSAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE*
Ga0105243_100289746	3300009148	Miscanthus Rhizosphere	LEEQIMNKILATLLITAALSSTSAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE*
Ga0105241_107455811	3300009174	Corn Rhizosphere	MKKILTTLAITAVLSSTGAFAEDRLHVSMENGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASAESN*
Ga0105238_115747001	3300009551	Corn Rhizosphere	KILATLLITAALSSTSAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE*
Ga0105239_111953991	3300010375	Corn Rhizosphere	MKKILTTLAITAVLSSTGAFAEDRLHVSMDNGKQRVDFSLNGNDKCVLIDDKIVCAPMPKAPLRVASSESN*
Ga0134124_132285731	3300010397	Terrestrial Soil	NLEEHNMNKILSTLIVAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASAESN*
Ga0134122_104800621	3300010400	Terrestrial Soil	SPNVKFLQHETNLEEHNMNKILATLIVAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASAESN*
Ga0134121_102464722	3300010401	Terrestrial Soil	MNKILSSLILAAVLASTSAFAEDTLRVSMQDGKQRVDFSLNGRGKCVMIDDKITCQPTPQPRVRVASSESK*
Ga0126350_108563272	3300010880	Boreal Forest Soil	MNEILSTLLIAAVLSSASAFAEDTLRVSMQNGKQRVDFSLNGNDKCVMIDDKITCAPMPKEPIRVASTESN*
Ga0105246_118049191	3300011119	Miscanthus Rhizosphere	LEEHNMNKILATLIVAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASAESN*
Ga0137438_10050672	3300011431	Soil	MKQRQEFNAPPPASNVKFLQHETLLEEQIMNKILRTLVIAAVLSGSTAFAEDTLRVSMENGKQRVDFSLNGNDKCVMIDDKIVCAPMPKTPVRVASADSN*
Ga0137438_12539651	3300011431	Soil	MNKILGTLVIAALLSGSTTFAEDTLRVSVENGKQRVDFSLNGNNKCVMVDDKITCAPMPQAPIRVASSESN*
Ga0137437_10630322	3300011442	Soil	MNTILSTLVIAAVLSSSTAFAEDTLRVSLENGKQRVDFSLNGNNKCVMVDDKIYCQPMPAAPVRVASSTSN*
Ga0150985_1044169862	3300012212	Avena Fatua Rhizosphere	NSLLIAAVLSSTGAFAEDTLRTSMQDGKHRVDFSLNGNNKCVMIDDKITCAPMKQAPIRVASSESK*
Ga0150985_1151926521	3300012212	Avena Fatua Rhizosphere	VKFLQRNTKLEEPTMNNILSSLILAIVLASTSALAEDTLRVSMQQGKQHIDFSLNGNGKCVLIDDKITCQPMQQPRVRVASSESK*
Ga0150985_1176260671	3300012212	Avena Fatua Rhizosphere	CSSDLEPGEPTMNKIYSGLILAAILTSTSALAEDTLRVSMQDGKQRVDFSLYGNGKCVMIDDKITCQPAPQPPVRVASSESK*
Ga0150984_1043973701	3300012469	Avena Fatua Rhizosphere	KLEGPTMNKILSSLILATVLASTSALAEDTLRVSMQEGKQRIDFSLNGNGKCVLIDDKITCQPMQQPRVHVASSESK*
Ga0150984_1187882811	3300012469	Avena Fatua Rhizosphere	RNEPGEPTMNKIYSGLILAAILTSTSALAEDTLRVSMQDGKQRVDFSLYGNGKCVMIDDKITCQPAPQPPVRVASSESK*
Ga0150984_1197154601	3300012469	Avena Fatua Rhizosphere	MNKILSSLILAAVLASTSALAEDTLRVSMQDGKQRVDFSLNGNGKCVMIDDKITCQPMPQPRVRIASSESK*
Ga0137397_107472091	3300012685	Vadose Zone Soil	NVKFLQHETHLEEPTMNKILSTLLIAAALSSATAFAEDTLRVSMENGKKRVDFSLNGNDKCVMIDDKITCAPMPLTPIRVASSESN*
Ga0137394_113374221	3300012922	Vadose Zone Soil	MNKILSALVIAAILSSTAAFAEDTLRVSMQNGKQRVDFSLNGNDKCVMIDDKITCAPMARTPIRVASSESN*
Ga0137410_108330452	3300012944	Vadose Zone Soil	SSTGAFAEDTLRTSMQNGKQRVDFSLNGNDKCVMIDDKITCAPMQQAPIRVASSESN*
Ga0137410_115413731	3300012944	Vadose Zone Soil	MNKILATLMIAAALSSATAFAEDTLRVTMQNGKQRIDFSLNGNDKCVMINDRITCQPKPREAIRVASSESN*
Ga0157378_104105973	3300013297	Miscanthus Rhizosphere	MNKILSSLILATVLASTSGFAEDTLRVSMQDGKQRVDFSLNGRGKCVMIDDKITCQPMPQPRVRVASSESK*
Ga0163162_106583481	3300013306	Switchgrass Rhizosphere	QDFTAPPCPPNVKFLQHEPNLEEHNMNKILTALLIAAALSSATAFADDTLRTSMQNGKQRVDFSLNGNDKCVLTDDKITCAPMKQAPVRVASAESN*
Ga0157375_101953564	3300013308	Miscanthus Rhizosphere	ATLLITAALSSTSAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE*
Ga0157376_109099581	3300014969	Miscanthus Rhizosphere	TLLEEHIMNKILATLLITAALSSTSAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE*
Ga0167658_11047221	3300015195	Glacier Forefield Soil	MNKILNSLLLAAVLSSSASFAEDTLRVSMQNGKQRVDFSLNGNDKCVMIDDKIHCAPMKKVPIRVATSEAN*
Ga0137409_103681782	3300015245	Vadose Zone Soil	MNKILSTLLIAAVLSSTGAFAEDTLRTSMQNGKQRVDFSLNGNDKCVMIDDKITCAPMQQAPIRVASSESN*
Ga0163161_109733801	3300017792	Switchgrass Rhizosphere	MNKILATLLITAALSSTSAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE
Ga0190266_105786172	3300017965	Soil	MNKILSTLLIAAALSSSGAFAEDKLHVSMENGKQRIDFSLNGNDKCVLINDRITCQPMADTPIKVASSESR
Ga0184628_100307032	3300018083	Groundwater Sediment	MNKILSTVVIAAVLSGSTAFAEDTLRVSLENGKQRVDFSLNGNNKCVMVDDKIYCQPMPAAPVRVASSTSN
Ga0184629_102059361	3300018084	Groundwater Sediment	MNKILSTVVIAAVLSSSTAFAEDTLRVSLENGKQRVDFSLNGNNKCVMVDDKIYCQPMPAAPVRVASSTSN
Ga0190274_100336311	3300018476	Soil	MNKILAALLVAAAVSAPGAFAEDKIHVSMENGKQRIDFSLNGNDKCVIINDRITCQPMPQPPVRVASSESN
Ga0210403_104311302	3300020580	Soil	MNKILSTLLIAAVLSSASAFAEDTLRVSMQNGKQRVDFSLNGNDKCVMIDDKITCAPMPKEPIRVASTESN
Ga0210379_103022841	3300021081	Groundwater Sediment	MNTILSTVVIAAVLSGSTAFAEDTLRVSLENGKQRVDFSLNGNNKCVMVDDKIYCQPMPAAPVRVASSTSN
Ga0207642_102613402	3300025899	Miscanthus Rhizosphere	MNKILTALLIAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASAESN
Ga0207645_102267912	3300025907	Miscanthus Rhizosphere	MKKILTTLAITAVLSSTGAFAEDRLHVSMENGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE
Ga0207643_100205603	3300025908	Miscanthus Rhizosphere	MKKILTTLAITAVLSSTGAFAEDRLHVSMENGKQRVDFSLNGNDKCVLIDDKIVCAPMPKAPLRVASSESN
Ga0207662_105092691	3300025918	Switchgrass Rhizosphere	LLEEQIMNKILATLLITAALSSTSAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE
Ga0207694_112935521	3300025924	Corn Rhizosphere	MNKILATLIVAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE
Ga0207687_113757571	3300025927	Miscanthus Rhizosphere	FLQHETLLEEHIMNKILATLLITAALSSTSAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE
Ga0207701_107462801	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MNKILTALLIAAALSSATAFADDTLRTSMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASAESN
Ga0207686_114211481	3300025934	Miscanthus Rhizosphere	MNKILATLIVAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVR
Ga0207670_100761143	3300025936	Switchgrass Rhizosphere	MNKILATLIVAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQ
Ga0207669_117064491	3300025937	Miscanthus Rhizosphere	PFRNVKFLQHETLLEEQIMNKILATLLITAALSSTSAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE
Ga0207704_104621761	3300025938	Miscanthus Rhizosphere	MNKILATLIVAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVLIDDKITCAPMKQAPVRVASAESN
Ga0207712_108141361	3300025961	Switchgrass Rhizosphere	MNKILATLLITAALSSTGAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE
Ga0208418_10360621	3300026018	Natural And Restored Wetlands	NKILATLLIATALSSTGAFAEDRLRVSMENGKQRVDFSLNGNDKCVMIDDKIICAPMPKEPVHVASSESN
Ga0207703_114342192	3300026035	Switchgrass Rhizosphere	AALSSTSAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE
Ga0207675_1000084828	3300026118	Switchgrass Rhizosphere	PPFRNVKFLQHETLLEEQIMNKILATLLITATLSSASAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE
Ga0209683_102324741	3300027840	Wetland Sediment	MNKILSTLVIAAALSSSTAFAEDTLRVSMENGKQRVDFSLNGNNKCVMIDDKIVCAPMPRTPVRVASSDYN
Ga0209583_100046102	3300027910	Watersheds	MNKILSTLLIAAVLSSASAFAEDTLHVSMENGKKRVDFSLNGNDKCVMIDDKITCAPMPKAPIRVASSESN
Ga0209583_100765153	3300027910	Watersheds	MNKILGTLVLAAVLSSTTALGEDKFRVSMENGKQRVDFSLNGNDRCVMIDDKIVCAPMKPAAIRVASVESN
Ga0209069_100564754	3300027915	Watersheds	MNKILSTLLIAAVLSSASAFAEDTLHVSMENGKKRVDFSLNGNDKCVMIDDKITCAPMPKEPIRVASSESN
Ga0268264_101496681	3300028381	Switchgrass Rhizosphere	SSTGAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSSNE
Ga0210278_10276732	3300030596	Soil	MNKILSTLVIAALLSSSAAFAEDRFKVSMENGKQRVDFSLNGNDKCVMLDDKIVCAPMPKATIHVASSESK
Ga0073997_120195721	3300030997	Soil	MNKILATLLIAAALSGTTAFAEDTLRLSLQNGKQRVDFSLNGNDRCVMIDDKITCAPMKPAPVRVATSESN
Ga0073996_122555001	3300030998	Soil	ILATLLIAAALSGTTAFAEDTLRLSLQNGKQRVDFSLNGNDRCVMIDDKITCAPMKPAPVRVATSESN
Ga0170824_1210918022	3300031231	Forest Soil	VLTIAAALSSTGAFAEDKLHVSMENGKQRIDFSLNGTGKCVIIDDKITCQPMPQPIKVASSETN
Ga0307468_1000296082	3300031740	Hardwood Forest Soil	VKTILTTLAIAAVLSSTGAFAEDRLHVSMENGKQRVDFSLNGNDKCVLIDDKIVCAPMPKAPLRVASSESN
Ga0307468_1001279722	3300031740	Hardwood Forest Soil	MNKILATLLITAALSSTSAFAEDRLRVSQQDGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASSESN
Ga0307468_1018883821	3300031740	Hardwood Forest Soil	MNKILATLVVAAALSSATAFAEDTLRVTMQNGKQRVDFSLNGNDKCVMIDDKITCAPMKQAPVRVASAESN
Ga0315290_1000635511	3300031834	Sediment	MNKILSTLVLAAVLSSATAFAEDTLRVSMQNGKQRVDFSLNGNDKCVMVDDKITCAPMKQAPIRVASSESN
Ga0315290_100063556	3300031834	Sediment	MKKILSTLVLAAVLSSSAAYAEDTLRVSMQNGKQRVDFSLNGNDKCVMVDDKITCAPMKQAPIRVASSESN
Ga0315278_111665092	3300031997	Sediment	MNKILSTLVIAVALSSSTAFAEDTLRVSMENGKQRVDFSLNGNNKCVMVDDKIHCAPMPATPIRVASSTSN
Ga0315292_113712102	3300032143	Sediment	MNKILSTLVLAAVLSSATAFAEDTLRVSMQNGKQRVDFSLNGNDKCVMVDDKITCAPM
Ga0315912_102712021	3300032157	Soil	TLLIAAALSGSAAFAEDKLRVSMENGKQRVDFSLNGNDRCVMVDDKIHCAPMPVVPVRVASSESN
Ga0315271_118445132	3300032256	Sediment	TLSSSTAFAEDTLRVSMENGKQRVDFSLNGNNKCVMVDDKIHCAPMPATPIRVASSTSN
Ga0315287_108102401	3300032397	Sediment	MNKILGTLVIAAVLSSSTAFAEDTLRVSMENGKQRVDFSLNGNNKCVMVDDKIHCAPMPATPIRVASSTSN
Ga0335083_115577622	3300032954	Soil	MNKILAAALIAAALSSTGAFAEDRFRTSTENGKQRIDFSLNGNDRCVIVDDKITCLPTPADKVRVAAVESR
Ga0370481_0406824_206_433	3300034281	Untreated Peat Soil	MNKLLAALMPIALIAAALASNGASAEDRYRVSMENGKQRVDFSLNGNDKCVMIDDKIVCAPMPKAKVQLASTESN
Ga0364943_0368966_56_271	3300034354	Sediment	MNTILSTLVMAAVLSGSTAFAEDTLRVSLENGKQRVDFSLNGNNKCVMVEDKIYCQPMPAAPVRVASSTSN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089452

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences