Metagenome / Metatranscriptome Family F089472

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089472
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	87 residues
Representative Sequence	AGTVLRITNNDVMPHKLIQAAGPKVRLAHPNMIKMASSATVKLTQKGVYRFTTKAGEDYSWAGSMKTVGEDNVLRLTVRVK
Number of Associated Samples	99
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.75 %
% of genes near scaffold ends (potentially truncated)	91.74 %
% of genes from short scaffolds (< 2000 bps)	93.58 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (35.780 % of family members)
Environment Ontology (ENVO)	Unclassified (36.697 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.550 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 28.44% Coil/Unstructured: 71.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF07883	Cupin_2	50.46
PF00196	GerE	24.77
PF13185	GAF_2	2.75
PF02518	HATPase_c	2.75
PF07730	HisKA_3	1.83
PF03625	DUF302	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.83
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.83
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.83
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.83
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	88.07 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	5.50 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	88.07 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	5.50 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	80.73 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	5.50 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4.59 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	80.73 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	5.50 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4.59 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	80.73 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5.50 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	2.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	80.73 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5.50 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	80.73 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5.50 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	1.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	80.73 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5.50 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1.83 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_GG3DY5402H5DXZ	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
2199352025\|deepsgr__Contig_143764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1956815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300001536\|A1565W1_10864956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	815	Open in IMG/M
3300001536\|A1565W1_11091504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300001537\|A2065W1_10047795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1472	Open in IMG/M
3300001538\|A10PFW1_11118456	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	571	Open in IMG/M
3300001664\|P5cmW16_1062823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300004114\|Ga0062593_100994603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859	Open in IMG/M
3300004156\|Ga0062589_102852292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300004157\|Ga0062590_100694450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	915	Open in IMG/M
3300004643\|Ga0062591_101927423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300004643\|Ga0062591_102985989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300005162\|Ga0066814_10040686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300005162\|Ga0066814_10090022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300005164\|Ga0066815_10022983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	886	Open in IMG/M
3300005331\|Ga0070670_102067874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300005340\|Ga0070689_100401573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1159	Open in IMG/M
3300005347\|Ga0070668_100455189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1101	Open in IMG/M
3300005364\|Ga0070673_101688547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300005367\|Ga0070667_100529428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1082	Open in IMG/M
3300005406\|Ga0070703_10257147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300005455\|Ga0070663_100711309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	855	Open in IMG/M
3300005466\|Ga0070685_10371821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	982	Open in IMG/M
3300005536\|Ga0070697_101646172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300005540\|Ga0066697_10722543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300005614\|Ga0068856_100226614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1885	Open in IMG/M
3300006163\|Ga0070715_10149512	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300006574\|Ga0074056_11717404	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	849	Open in IMG/M
3300006578\|Ga0074059_11580802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300006580\|Ga0074049_12914780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300006606\|Ga0074062_12835148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300006794\|Ga0066658_10095249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1395	Open in IMG/M
3300006881\|Ga0068865_101643768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300009012\|Ga0066710_101291872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1132	Open in IMG/M
3300009012\|Ga0066710_104790250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300009088\|Ga0099830_11466749	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	568	Open in IMG/M
3300009137\|Ga0066709_103444559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300010373\|Ga0134128_12354677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300010396\|Ga0134126_12830460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300012008\|Ga0120174_1164301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300012011\|Ga0120152_1012074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3614	Open in IMG/M
3300012019\|Ga0120139_1107046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300012096\|Ga0137389_10653010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	904	Open in IMG/M
3300012200\|Ga0137382_11006904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300012207\|Ga0137381_11300346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300012211\|Ga0137377_10746760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	912	Open in IMG/M
3300012285\|Ga0137370_10340181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	901	Open in IMG/M
3300012350\|Ga0137372_11201866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300012354\|Ga0137366_11195598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300012356\|Ga0137371_10166016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1732	Open in IMG/M
3300012359\|Ga0137385_10573113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	951	Open in IMG/M
3300012532\|Ga0137373_10265942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1378	Open in IMG/M
3300012906\|Ga0157295_10310067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300012951\|Ga0164300_10847885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300012951\|Ga0164300_10996275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300012955\|Ga0164298_11686020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300012958\|Ga0164299_10026305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2465	Open in IMG/M
3300012986\|Ga0164304_10785060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300012987\|Ga0164307_10530671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	895	Open in IMG/M
3300013297\|Ga0157378_11160684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	811	Open in IMG/M
3300013307\|Ga0157372_10169042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2529	Open in IMG/M
3300013758\|Ga0120147_1001609	All Organisms → cellular organisms → Bacteria	6941	Open in IMG/M
3300017659\|Ga0134083_10174748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	878	Open in IMG/M
3300018028\|Ga0184608_10031657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1995	Open in IMG/M
3300018081\|Ga0184625_10142680	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300018433\|Ga0066667_11252686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300018468\|Ga0066662_11988617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300019872\|Ga0193754_1017444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300020001\|Ga0193731_1115636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300020008\|Ga0193757_1033177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300020022\|Ga0193733_1012331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2410	Open in IMG/M
3300022756\|Ga0222622_11157234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300025905\|Ga0207685_10420094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300025927\|Ga0207687_11432151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300025929\|Ga0207664_10606092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	983	Open in IMG/M
3300025986\|Ga0207658_11638151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300026095\|Ga0207676_11906023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300026142\|Ga0207698_11163180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785	Open in IMG/M
3300027401\|Ga0208637_1028452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300028379\|Ga0268266_10283384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1541	Open in IMG/M
3300028704\|Ga0307321_1021294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1142	Open in IMG/M
3300028713\|Ga0307303_10015464	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300028716\|Ga0307311_10164899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300028716\|Ga0307311_10231357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300028720\|Ga0307317_10128989	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	845	Open in IMG/M
3300028721\|Ga0307315_10000885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6942	Open in IMG/M
3300028721\|Ga0307315_10069239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1006	Open in IMG/M
3300028768\|Ga0307280_10065669	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300028778\|Ga0307288_10445806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300028784\|Ga0307282_10080955	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300028784\|Ga0307282_10081869	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300028793\|Ga0307299_10161848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	843	Open in IMG/M
3300028811\|Ga0307292_10529381	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300028819\|Ga0307296_10282850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	904	Open in IMG/M
3300028824\|Ga0307310_10506051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300028828\|Ga0307312_10082284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1971	Open in IMG/M
3300028872\|Ga0307314_10040793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1137	Open in IMG/M
3300028876\|Ga0307286_10149010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	837	Open in IMG/M
3300028876\|Ga0307286_10186540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300028878\|Ga0307278_10522941	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	518	Open in IMG/M
3300028880\|Ga0307300_10093538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	901	Open in IMG/M
3300028884\|Ga0307308_10079225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1556	Open in IMG/M
3300028885\|Ga0307304_10378859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300028885\|Ga0307304_10566851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300031226\|Ga0307497_10014376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2322	Open in IMG/M
3300034448\|Ga0370540_13467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300034644\|Ga0370548_104297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300034681\|Ga0370546_017590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	919	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.16%
Host-Associated	Host-Associated	12.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.40%
Plants	Host-Associated → Plants	12.84%
Aquatic	Environmental → Aquatic	2.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.67%
Sediment	Environmental → Aquatic → Sediment	2.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.98%
Loam	Environmental → Terrestrial → Soil → Loam	6.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	56.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	8.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	35.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.26%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	8.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012008	Permafrost microbial communities from Nunavut, Canada - A39_80cm_12M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019872	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020008	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300034448	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_115 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_10163240	2070309009	Soil	DVMPHRLIQTSGPKITLVHPNMNRMASSATVLLAKKGIYRFTTKAGEDYAWAASMKTTAGDNVLHLTVHAK
deepsgr_02349060	2199352025	Soil	NNDVMPHKLIQTAGPKARLTHANMSRMATSATVKLEHKGVYRFTTKAGEDYAWASSMKTVGEDNVLRLTVRVK
ICChiseqgaiiDRAFT_19568151	3300000033	Soil	VMPHKLVQTAGLKLRIAHPNMRKMASSASVQLAQKGIYRFTTKPGEDYAWAASMKTVGEDNVLRLMVQVH*
A1565W1_108649561	3300001536	Permafrost	GCHSWSFNSGPFKASQFISVKAGTVLRFTNNDVMPHKLVQTAGLKLRLTHPMMNKMASSATVKLAQKGVYRFTTRAGEDYAWASSTKTVGEDKVLQLTVRVK*
A1565W1_110915042	3300001536	Permafrost	KAGTVLRFTNNDVMPHQLVQAAGPKMRLSHPKMSKMASSATVKLTQKGLYRFTTKAGEDYAWAGSMKTVGEDHVLSLTVRVR*
A2065W1_100477954	3300001537	Permafrost	RGCHSWSFNSGPFKASQFISVKAGTVLRFTNNDVMPHKLVQTAGLKLRLTHPMMNKMASSATVKLAQKGVYRFTTRAGEDYAWASSTKTVGEDKVLQLTVRVK*
A10PFW1_111184561	3300001538	Permafrost	DVMSHKLVQTAGPKMRLSHANMSKLASSASVKLTQKGVYRFTTKAGEDYSWAGSPKTVGEDSALRLTVRVK*
P5cmW16_10628232	3300001664	Permafrost	ATIAIRHQMRGCHSWSFNSGPFKASLGVTVRAGTVLKFTNNDVMPHKVIQAAGPKVRFTHPNLSKVASSATVKLTQKGVYRFTTKPGEDYSWAGSMKTIGEDHVLLLTVRVN*
Ga0062593_1009946033	3300004114	Soil	FGASQSVTVKAGTVLRFTNNDVMPHKLVQAAGPKMRLVHPNMLKMASPATVKLTQKGLYRFTTRAGEDYAWAASMKTAGEDNVLHLTVRVK*
Ga0062589_1028522922	3300004156	Soil	RGCHSWAFNSGPFKPSLSVNVSSGTVVRFTNNDVMPHKLIQTAGPKVRLMHQNMSKMASSATVKLTTKGLYRFTTKAGEDYPWAASMKTVGEDNVLRLTVRVK*
Ga0062590_1006944503	3300004157	Soil	IRHQMRGCHSWSFNSGPFRASQSVTVKAGTVLRFTNNDVMPHKLVQAAGPKMRLVHPNMLKMASSATVKLTQKGLYRFTTRAGEDYAWAASMKTAGEDNVLHLTVRVK*
Ga0062591_1019274231	3300004643	Soil	WAFNSGPFKPSLSVSVSSGTVVKVTNNDVMPHKLIQTAGPKVRLIHQNMSKMASSATIKLTTKGVYRFTTRAGEDYPWAASMKTVGEDNVLRLTVRVK*
Ga0062591_1029859891	3300004643	Soil	HKLVQTAGTKLRIAHPNMRKMGSSAAVTLGQKGVYRFTTKPGEDYAWAGSMKTVGEDNVLRLMVQVH*
Ga0066814_100406863	3300005162	Soil	TNNDVMPHKLIQTAGPKARLTHANMSRMAASATMRLEHKGVYRFTTKPGEDYAWASSMKTVGEDNVLRLTVRVK*
Ga0066814_100900222	3300005162	Soil	TLSVVVTAGTTLRFVNNDVMPHMLIQAAGPKLRLMHPGMNKMASTSTIKLTHKGVYRFTTKAGEDYKWASSMKTVGEDNVLRLTVRVK*
Ga0066815_100229831	3300005164	Soil	CHSWSFNSGPFKPALSVSVKAGTVLRITNNDVMPHKLIQTAGPKAGLTHANMSRMATSATVKLEHKGVYRFTTKAGEDFAWASSMKTVGEENVLRLTVRVK*
Ga0070670_1020678741	3300005331	Switchgrass Rhizosphere	NVSSGTVVKVTNNDIMPHKLIQTGGPRVRLIHQNMSKMASSATVKLTIKGVYRFTTKAGEDYPWAASMKTTGEDNILRLTVRVK*
Ga0070689_1004015734	3300005340	Switchgrass Rhizosphere	SVNVSSGTVVKVTNNDIMPHKLIQTGGPRVRLIHQNMSKMASSATVKLTIKGVYRFTTKAGEDYPWAASMKTTGEDNILRLTVRVK*
Ga0070668_1004551894	3300005347	Switchgrass Rhizosphere	TVLKITNNDVMPHKLVQTAGSKLRLGHPNMTKMASSATVTLVQKGVYRFTTKPGEDYAWAASMKTVGEDNVLRLIVRVK*
Ga0070673_1016885472	3300005364	Switchgrass Rhizosphere	RHQMRGCHSWSFNSGLFKPSLSVSVKSGTVLKITNNDVMPHKLVQTAGSKLRLGHPNMTKMASSATVTLVQKGVYRFTTKPGEDYAWAASMKTVGEDNVLRLIVRVK*
Ga0070667_1005294284	3300005367	Switchgrass Rhizosphere	TAGSKLRLGHPNMTKMASSATVTLVQKGVYRFTTKPGEDYAWAASMKTVGEDNVLRLIVRVK*
Ga0070703_102571472	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	LFKPSLSVSVKPGTVLKITNNDVMPHKLVQTAGSKLRLGHPNMTKMASSATVTLVQKGVYRFTTKPGEDYAWAASMKTVGEDNVLRLIVRVK*
Ga0070663_1007113091	3300005455	Corn Rhizosphere	MPHKLVQTAGSKLRLGHPNMTKMASSATVTLVQKGVYRFTTKPGEDYAWAASMKTVGEDNVLRLIVRVK*
Ga0070685_103718213	3300005466	Switchgrass Rhizosphere	CHSWAFNSGPFKPSLSVNVSSGTVVKVTNNDIMPHKLIQTGGPRVRLIHQNMSKMASSATVKLTIKGVYRFTTKAGEDYPWAASMKTTGEDNILRLTVRVK*
Ga0070697_1016461721	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VMPHKLVQTAGSKLRLGHPNMTKMASSATVTLVQKGVYRFTTKPGEDYAWAASMKTVGEDNVLRLIVRVK*
Ga0066697_107225431	3300005540	Soil	WSFNSGPFKATQSVTVKAGTLLRFTNNDVMPHKLVQATGPKMRLAHPNMIKMASSATVKLTQKGTYRFTTKAGEDYAWAGMMKTVGEDNVLRLTVRVK*
Ga0068856_1002266144	3300005614	Corn Rhizosphere	MRGCHSWSFNSGLFKPSLSVSVKPGTVLKITNNDVMPHKLVQTAGSKLRLGHPNMTKMASSATVTLVQKGVYRFTTKPGEDYAWAASMKTVGEDNVLRLIVRVK*
Ga0070715_101495123	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	TNNDVMPHKLVQTAGSKLRLVHSNMTKMGSSATVTLAQKGVYRFTTKPGEDYAWAGSMKTVGEDNVLHLTVRVK*
Ga0074056_117174042	3300006574	Soil	YIYFVTWKQPDQAAGPKLRLMHPGMNKMASTSTIKLTHKGVYRFTTKAGEDYKWASSMKTVGEDNVLRLTVRVK*
Ga0074059_115808021	3300006578	Soil	LKITNNDVMPHKLIQTAGPKARLTHANMSRMAASATMRLEHKGVYRFTTKPGEDYAWASSMKTVGEDNVLRLTVRVK*
Ga0074049_129147803	3300006580	Soil	ITNNDVMSHKLIQTAGPKARLTHANMSRMATSATVKLEHKGVYRFTTKAGEDYAWASSMKTVGEDNVLRLTVRVK*
Ga0074062_128351481	3300006606	Soil	VNSGPLRPTLSVVVTAGTTLRFVNNDVMPHKLIQTAGPKLPLVHPGMNKMASTSTIKLTHKGVYRFTTKAGEDYKWASSMKTVGEDNVLRLTVRVK*
Ga0066658_100952494	3300006794	Soil	LKITNNDVMPHKLVQTAGVKLRLAHPSMNTMASSATVTLRQKGVYRFTTRAGEDYGWARSMKTTGEDNVLHLTVHVK*
Ga0068865_1016437682	3300006881	Miscanthus Rhizosphere	MPHKLIQTGGPRVRLIHQNMSKMASSATVKLTIKGVYRFTTKAGEDYPWAASMKTTGEDNILRLTVRVK*
Ga0066710_1012918723	3300009012	Grasslands Soil	GGATITIRHQMRGCHSWSFNSGPFKATQSVTVKAGTLLRFTNNDVMPHKLVQAAGPKMRLAHPNMIKMASSATVKLTQKGTYRFTTKAGEDYAWAGMMKTVGEDNVLRLTVRVK
Ga0066710_1047902501	3300009012	Grasslands Soil	VRAGTVLQFTNNDVMPHKLIQVGGPKVRLTHPNMSKVASSSTVKLTQNGVYRFTTKAGEDYSWAGSMKTVGEDHVLQLTVRVK
Ga0099830_114667492	3300009088	Vadose Zone Soil	VMPHKLVQAAGPKLRLVHPTMSKMASSASVKLTQKGVYRFTTKPGTDYAWAGSPKTVGEDNVLHLTVRVK*
Ga0066709_1034445591	3300009137	Grasslands Soil	NNDVMPHKLVQEAGPKVRLAHPNMNKMASSSTVTLVQKGVYRFTTKPGEDNAWAGSMKTVGEDNVLHLTVHVK*
Ga0134128_123546772	3300010373	Terrestrial Soil	HKLVQTAGSKLRLGHPNMTKMASSATVTLVQKGVYRFTTKPGEDYAWAASMKTVGEDNVLRLIVRVK*
Ga0134126_128304602	3300010396	Terrestrial Soil	TTITISHHMRGCHVWSVSSGPQRPNLSVVIAPGSTLRFVNNDVMPHKLIQTAGPKLHVVHPGMNKIASTSTIKLTQKGVYRFTTKAGEDYKWAASMKTVGEDNVLHLTVRVK*
Ga0120174_11643011	3300012008	Permafrost	QGAGRRSRSVIRHRGCHSWSFNSGPFKASQSVTVKAGTVLRFTNNDVMPHKLVQAAGPKMRLVHPNMIKMASSATVKLTQKGVYRFTTKAGEDYAWAGSMKTVGEDHVLSLTVRVR*
Ga0120152_10120745	3300012011	Permafrost	AGPKMLLVHPKMSKIASSATVKLAQKGLYRFTTKPGEDYVWAGTMKTIGEDNVLRLTVRVK*
Ga0120139_11070461	3300012019	Permafrost	MRGCHSWSFNSGPFKASLGVTVRAGTVLKFTNNDVMPHKVIQAAGPKVRFTHPNLSKVASSATVKLTQKGVYRFTTKPGEDYSWAGSMKTIGEDHVLLLTVRVN*
Ga0137389_106530101	3300012096	Vadose Zone Soil	GCHSWSFNSGPFKASLAVNVRAGTVLKFTNNDVMPHKLIQVAGPKIRLTHPNMSKVASSATVKLTQQGVYRFTTTRGEDYSWAGSMKTVGEDHVLRLTVRVK*
Ga0137382_110069042	3300012200	Vadose Zone Soil	TNNDVMPHKLIQSAGPKVRFTQPNLSKVGSSATVKLTQQGVYRFTTKPGEDYSWAGSMKTIGEDHVLLLTVRVK*
Ga0137381_113003462	3300012207	Vadose Zone Soil	SGPFKPSLSVSVKVGTVLRITNNDVMPHKLVQVAGLKVRLAHPNMSKMASAATMKLTQKGVYRFATKAGEDYAWAGSMKTMGEDNVLRLTVRVK*
Ga0137377_107467603	3300012211	Vadose Zone Soil	IRHQMRGCHSWSFNSGPFKATQSVTVKAGTLLRFTNNDVMPHKLVQAAGPKMRLVHPNMIKMASSATVKLTQKGIYRFTTKPGEDYAWAGSMKTVGEDKVLHLTVWVK*
Ga0137370_103401811	3300012285	Vadose Zone Soil	NSGPFKASLAVTVRAGTVLKFTNNDVMPHKLIQSAGPKVRFTQPNLSKVGSSAQVKLTQQGVYRFTTKPGEDYSWAGSMKTIGEDHVLLLTVRVK*
Ga0137372_112018662	3300012350	Vadose Zone Soil	VMPHRLVQTAGSKLRLTHPNMSRMAASASVSFSQKGVYRFTTKAGEDYKWATSMKTIGEDHVLRLTVYVK*
Ga0137366_111955981	3300012354	Vadose Zone Soil	NSGPFKASQSVSVKAGTVLRFTNNDVMPHRLVQAAGPKVRLAHPNMIKMASSATVKLTQKGVYRFTTKAGEDYAWAGSMKTVGEDHVLQLTVRVK*
Ga0137371_101660163	3300012356	Vadose Zone Soil	MRSTLSITVQAGTVLHFVNNDVMPHRLVQTAGSKLRLTHPNMSRMAASASVSFSQKGVYRFTTKAGEDYKWATSMKTIGEDHVLRLTVHVK*
Ga0137385_105731133	3300012359	Vadose Zone Soil	FTNNDVMPHKLVQAAGPKMRLAHPNMIKMASSATVKLTQKGVYRFTTKAGEDYAWAGMMKTVGEDNVLHLMVRVK*
Ga0137373_102659424	3300012532	Vadose Zone Soil	MRSTLSITVQAGTVLHFVNNDVMPHRLVQTAGSKLRLTHPNMSRMAASASVSFSQKGVYRFTTKAGEDYKWATSMKTIGEDHVLRLTVYVK*
Ga0157295_103100671	3300012906	Soil	DVMPHKLVQAAGPKMRLVHPNMLKMASSATVKLTQKGLYRFTTRAGEDYAWAGSMKTVGEDNVLRLTVRVK*
Ga0164300_108478851	3300012951	Soil	TITIRHQMRGCHSWSFNSGMFKPSLSVSVKPGTVLKITNNDVMPHKLVQTAGSQLRLVHPNMTKMGSSATVTPAQKGVYRFTTKPGEDYAWAGSMKTVGEDNVLRMIVRVK*
Ga0164300_109962751	3300012951	Soil	MPHKLIQTAGPKVRLMHQNMSKMASSATVKLTTKGVYRFTTKAGEDYPWAASMKTAGEDNVLRLTVRVK*
Ga0164298_116860202	3300012955	Soil	FKPSLSVNVSSGTVVRFTNNDVMPHKLIQTAGPKVRLMHQNMSKMASSATVKLTTEGVYRFTTKAGEDYPWAASMKAVGEDNVLRLTVRVK*
Ga0164299_100263055	3300012958	Soil	IAIRHAMRGCHSWAFNSGPFKPSLSVSVSSGTVVSFTNNDVMPHKLVQTAGPKVRLIHQNMSKMASSATVKLTTKGIYRFTTKAGEDYPWATSMKTVGEDNVLRLTVRVK*
Ga0164304_107850601	3300012986	Soil	CHSWSFNSGMFKPSLSVSVKPGTVLKITNNDVMPHKLVQAAGPKMRLVHPNMLKMASSATVKLTQKGLYRFTTRAGEDYAWAGSMKTVGEDNVLHLTVRVK*
Ga0164307_105306711	3300012987	Soil	TISHQMRGCHVWSVSSGPQRPNLAVVMAPGSTLRVVNNDVMPHKLIQTAGPKLRVVHPGMNKIASTSMIKLTHKGLYRFTTKPGEDYKWAGSMKTVGEDNVLHLTVRVK*
Ga0157378_111606841	3300013297	Miscanthus Rhizosphere	CDIRPNKLIQTGCPRVRLIHQNMSKIASSATVKLTIKGVYRFTTKAGEDYPWAAAMKTTGEDNILRLTVRVK*
Ga0157372_101690425	3300013307	Corn Rhizosphere	GCHSWSFNSGLFKPSLSVSVKPGTVLKITNNDVMPHKLVQTAGSKLRLGHPNMTKMASSATVTLVQKGVYRFTTKPGEDYAWAASMKTVGEDNVLRLIVRVK*
Ga0120147_100160910	3300013758	Permafrost	MPHKLVQAAGPKVRLAHPNMIKMASSATVKLTQKGVYRFTTKAGEDYAWAGSMKTMGEDNVLHLTVRVK*
Ga0134083_101747481	3300017659	Grasslands Soil	TIRHQMRGCHSWSFNSGPFKATQSVTVKAGTLLRFTNNDVMPHKLVQAAGPKMRLAHPNMIKMASSATVKLTQKGVYRFTTKAGEDYAWAGMMKTVGEDNVLRLTVRVK
Ga0184608_100316571	3300018028	Groundwater Sediment	VTNNDVMPHKLIQTAGLKVRLSHPNMSKTAASASVTLTQKGVYRFTTKAGEDYPWAGSMKTVGEDNVLQLTVRVK
Ga0184625_101426801	3300018081	Groundwater Sediment	QRPDLSVVIAPGSTLRFVNNDVMPHKLIQTAGPKLRVVHPGMNKMASTSTIKLTHKGIYRFTTRAGEDYKWAASMKTVGEDNVLHLTVRVK
Ga0066667_112526862	3300018433	Grasslands Soil	FKASLAVTVRAGTVLKVTNNDVMPHKLIQSAGPKVRFTQPNLSKVGSSATVKLTQQGVYRFTTKPGEDYSWAGSMKTIGEDHVLLLTVRVK
Ga0066662_119886171	3300018468	Grasslands Soil	VTVRAGTVLKFTNNDVMPHKLIQAAGPQVRFTHPNMSKVASSATVKLTQKGVYRFTTKPGEDYSWAGSMKTIGEDHVLLLTVRVK
Ga0193754_10174441	3300019872	Soil	HVWSVSSGPQRPNLSVVIAPGSTLRFVNNDVMSHKLIQTAGPKLRLMHPGMNKMASTSTIKLTHKGVYRFTTKAGEDYKWASSMKTVGEDNVLHLTVRVK
Ga0193731_11156361	3300020001	Soil	CHTWSFNSGPFKPSLSVTVKAGTLLRFRNNDVMPHRLIQAAGPKMLLLHPKMNKMASSATVKLTQKGLYRFTTKPGEDYSWAGSMKTSGEDNVLRLTVRVK
Ga0193757_10331772	3300020008	Soil	NNDVMSHKLIQTAGPKLRLIHPGMNKMASTSTIKLTHKGVYRFTTKAGEDYKWASSMKTVGEDNVLHLTVRVK
Ga0193733_10123313	3300020022	Soil	NDVMPHKLVQAAGPKVRLAHPSMSKMGSSATVRLTQKGVYRFTTKPGEDYSWAGTMKTVGEDNVLRLTVRVR
Ga0222622_111572342	3300022756	Groundwater Sediment	RVGTVLRFTNDDVMPHQLVQAAGPKMRLVHPKMIKMASSATVKLTQKGLYRFTTKAGEDYAWAGSMKTVGEDNVLRLTVRVK
Ga0207685_104200941	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	KPGTVLKITNNDVMPHKLVQTAGSKLRLGHPNMTKMASSATVTLVQKGVYRFTTKPGEDYAWAASMKTVGEDNVLRLIVRVK
Ga0207687_114321512	3300025927	Miscanthus Rhizosphere	SVNVSSGTVVKVTNNDIMPHKLIQTGGPRVRLIHQNMSKMASSATVKLTIKGVYRFTTKAGEDYPWAASMKTTGEDNILRLTVRVK
Ga0207664_106060921	3300025929	Agricultural Soil	SVSVKPGTVLKITNNDVMPHKLVQTAGSKLRLGHPNMTKMASSATVTLVQKGVYRFTTKPGEDYAWAASMKTVGEDNVLRLIVRVK
Ga0207658_116381512	3300025986	Switchgrass Rhizosphere	VMPHKLVQTAGSKLRLGHPNMTKMASSATVTLVQKGVYRFTTKPGEDYAWAASMKTVGEDNVLRLIVRVK
Ga0207676_119060231	3300026095	Switchgrass Rhizosphere	GLFKPSLSVSVKSGTVLKITNNDVMPHKLVQTAGSKLRLGHPNMTKMASSATVTLVQKGVYRFTTKPGEDYAWAASMKTVGEDNVLRLIVRVK
Ga0207698_111631801	3300026142	Corn Rhizosphere	RHQMRGCHSWSFNSGLFKPSLSVSVKPGTVLKITNNDVMPHKLVQTAGSKLRLGHPNMTKMASSATVTLVQKGVYRFTTKPGEDYAWAASMKTVGEDNVLRLIVRVK
Ga0208637_10284522	3300027401	Soil	LSVSVKAGTVLRITNNDVMPHKLIQTAGPKAGLTHANMSRMATSATVKLEHKGVYRFTTKAGEDFAWASSMKTVGEDNVLRLTVRVK
Ga0268266_102833841	3300028379	Switchgrass Rhizosphere	LSVSVKSGTVLKITNNDVMPHKLVQTAGSKLRLGHPNMTKMASSATVTLVQKGVYRFTTKPGEDYAWAASMKTVGEDNVLRLIVRVK
Ga0307321_10212941	3300028704	Soil	WSVSSGPQRPDLSVVIAPGSTLRFVNNDVMPHKLIQTAGPKLRVVHPGMNKMAATSTIKLIHKGVYRFTTKAGEDYKWAASMKTVGEDNVLHLTVRVK
Ga0307303_100154643	3300028713	Soil	MLGCHVWSVSSGPQRPDLSVVIAPGSTLRFVNNDVMPHKLIQTAGPKLRVVHPGMNKMAETSTIKLIHKGVYRFTTKAGEDYKWAASMKTVGEDNVLHLTVRVK
Ga0307311_101648991	3300028716	Soil	AGTVLRITNNDVMPHKLIQAAGPKVRLAHPNMIKMASSATVKLTQKGVYRFTTKAGEDYSWAGSMKTVGEDNVLRLTVRVK
Ga0307311_102313572	3300028716	Soil	GCHSWSFNSGQFKPALSVSVKAGTVLRITNNDVMPHKLVQTAGLKLRLTHPTMSKMASSATMTLTKRGVYRFTTRAGEDYAWAASMKTVGEDNVLHLTVHVK
Ga0307317_101289891	3300028720	Soil	AGPKMRLVHPKMIKMPSSATVKLTQRGLYRFTTKAGEDYAWAGSMKTVGEDNVLHLTVRV
Ga0307315_100008857	3300028721	Soil	ITISHHMRGCHVWSVSSGPQRPDLSVVIAPGSTLRFVNNDVMPHKLIQTAGPKLRVVHPGMNKMAATSTIKLTHKGVYRFTTKAGEDYKWAASMKTVGEDNVLHLTVRVK
Ga0307315_100692391	3300028721	Soil	HSWSFNSGPFKPSLSVSVKAGTVLRFTNNDVMPHKLIQTAGLKVRLSHPNMSKTAASASVTLTQKGVYRFTTKAGEDYPWAGSMKTVGEDNVLQLTVRVK
Ga0307280_100656691	3300028768	Soil	KAGTVLRFTNNDVMPHKLIQTAGLKVRLSHPNMSKTAASASVTLTQKGVYRFTTKAGEDYPWAGSMKTVGEDNVLQLTVRVK
Ga0307288_104458062	3300028778	Soil	RAGTVLRFTNNDVMPHQLVQAAGPKMRLVHPKMIKMPSSATVKLTQRGLYRFTTKAGEDYAWAGSMKTVGEDNVLRLTVRVK
Ga0307282_100809553	3300028784	Soil	VKTGTVLRFTNNDVMPHKLVQAAGPKVRLAHPSMSKMGSSATVRLTQKGVYRFTTKPGEDYSWAGTMKTVGEDNVLRLTVRVR
Ga0307282_100818691	3300028784	Soil	FTNNDVMPHQLVQAAGPKMRLVHPKMIKMPSSATVKLTQRGLYRFTTKPGEDYAWAGSMKTVGEDNVLHLTVRVK
Ga0307299_101618482	3300028793	Soil	KAGTVLRFTNNDVMPHKLVQAAGPKMRLVHPKMIKMASSATVKLTQKGLYRFTTKAGEDYAWAGSMKTVGEDNVLHLTVRVK
Ga0307292_105293812	3300028811	Soil	GPKMRLVHPKMIKMPSSATVKLTQRGLYRFTTKAGEDYAWAGSMKTVGEDNVLHLTVRVK
Ga0307296_102828502	3300028819	Soil	NSGPFKASLSASVQAGTVLRFTNNDVMPHKLVQAAGPKMRLSHPNMIKMASSATVKLTQKGVYRFTTKAGEDYAWAGSMKTVGEDNVLHLTVRVK
Ga0307310_105060512	3300028824	Soil	MKITNNDVMPHKLVQTAGSKLRLVDPNMTKMGWSSTVTLAQKGVYRFITKPGEDYGWVSSMKTVGEDNVLRLMVRVK
Ga0307312_100822841	3300028828	Soil	AGPKVRLAHPNMIKMASSATVKLTQKGVYRFTTKAGEDYSWAGSMKTVGEDNVLRLTVRV
Ga0307314_100407934	3300028872	Soil	HSWSFNSGPFKASQSITLRAGTVLRFTNNDVMPHKLVQAAGPKMRLVHPKMIKMASSATVKLTQKGLYRFTTKAGEDYAWAGSMKTVGEDNVLRLTVRVK
Ga0307286_101490103	3300028876	Soil	HDQHQMRGCHSWSFNSGLFKPSLSVSVKPGTVLKITNNDVMPHKLVQTAGSKLRLVHSNMTKMGSSATVTLAQKGVYRFTTKPGEDYAWAASMKTVGEDNVLRLIVRVK
Ga0307286_101865401	3300028876	Soil	STLRFVNNDVMPHKLIQTAGPKLRVVHPGMNKMAATSTIKLIHKGVYRFTTKAGEDYKWAASMKTVGEDNVLHLTVRVK
Ga0307278_105229411	3300028878	Soil	VQAAGPKMRLVHPKMIKMASSATVKLTQKGLYRFTTKAGEDYAWAGSMKTVGEDNVLHLTVRVK
Ga0307300_100935381	3300028880	Soil	IAIRHQMRGCHSWSFNSGQFKPALSVSVKAGTVLRITNNDVMPHKLVQTAGLKLRLTHPTMSKMASSATMTLTKRGVYRFTTRAGEDYAWAASMKTVGEDNVLHLTVHVK
Ga0307308_100792254	3300028884	Soil	TNNDVMPHKLVQAAGPQMRLAHPNMIKMASSATVKLTQRGVYRFTTKPGEDYGWAGTMKTVGEDNVLHLTVRVK
Ga0307304_103788592	3300028885	Soil	RAGTVLRFTNNDVMPHQLVQAAGPKMRLVHPKMIKMPSSATVKLTQRGLYRFTTKPGEDYAWAGSMKTVGEDNVLHLTVRVK
Ga0307304_105668512	3300028885	Soil	PFKPSLSVSIKAGTVLKITNNDVMPHKLIQTSGLKLRIAHSIMSKMASSATVTLAQKGVYRFTTKPGEDYAWAGSMKTVGEDNVLHLTVHVK
Ga0307497_100143765	3300031226	Soil	AGTVLKITNNDVMPHKLIQTAGPKARLTHANMSRMAASATVKLGQKGVYRFTTKPGEDYAWASSMKTVGEDNVLRLTVRVK
Ga0370540_13467_180_494	3300034448	Soil	MRGCHSWSFNSGPFRASQTVTLKAGMVLRFTNNDVMPQRLVQAAGPRMRLVHPNMLKMTSSATVKLTQKGLYRFTTRAGEDYAWVGSMRTLGKDNALHLTVRVR
Ga0370548_104297_6_242	3300034644	Soil	VLRFTNNDVMPHKLIQAAGPKVRLTHPNMSKVEASTTVKLTQKGVYRFTTKAGEDYAWAGSMKTVGEDNVLRLTVRVK
Ga0370546_017590_114_428	3300034681	Soil	MHGCHSWSFNSGPFKAFQSVSVKTGTVLRFTNNDVMPHKLVQAAGPKVRLAHPSMSKMGSSATVRLTQKGVYRFTTKPGEDYSWAGTMKTVGEDNVLRLTVRVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089472

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences