Metagenome Family F089537

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089537
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	108 residues
Representative Sequence	MSTTLNPEIAALREKVEEHGKELAEMRGTVNQLNNIVSASVRQSIWQLIALLVSLCVTIAGGLAYQGTMIDKRFEQIEKRFEQLERRIEQSEKNITARFEDLKQEVRAQRK
Number of Associated Samples	88
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.15 %
% of genes near scaffold ends (potentially truncated)	36.70 %
% of genes from short scaffolds (< 2000 bps)	83.49 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.633 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (16.514 % of family members)
Environment Ontology (ENVO)	Unclassified (41.284 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.624 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 74.82% β-sheet: 0.00% Coil/Unstructured: 25.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF12704	MacB_PCD	7.48
PF13360	PQQ_2	6.54
PF14685	Tricorn_PDZ	4.67
PF03572	Peptidase_S41	4.67
PF02687	FtsX	3.74
PF13570	PQQ_3	3.74
PF04255	DUF433	2.80
PF13620	CarboxypepD_reg	2.80
PF13505	OMP_b-brl	0.93
PF01751	Toprim	0.93
PF13594	Obsolete Pfam Family	0.93
PF07927	HicA_toxin	0.93
PF13181	TPR_8	0.93
PF01361	Tautomerase	0.93
PF06803	DUF1232	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	4.67
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	2.80
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.93
COG1942	Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.63 %
Unclassified	root	N/A	40.37 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.63 %
Unclassified	root	N/A	40.37 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.63 %
Unclassified	root	N/A	40.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.37 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	9.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.83 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.37 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.59 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.83 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.92 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.59 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.83 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.92 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.92 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.92 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.92 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.59 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	1.83 %
Gloeobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria	0.92 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.92 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.92 %
Halanaerobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales	0.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.59 %
Gloeobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales	0.92 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.92 %
Desulfonatronaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfonatronaceae	0.92 %
Thiocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa	0.92 %
Halanaerobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halanaerobiaceae	0.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.92 %
Desulfohalobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfohalobiaceae	0.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.59 %
Desulfonatronospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfohalobiaceae → Desulfonatronospira	0.92 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.92 %
Gloeobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae	0.92 %
Thiocapsa marina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina	0.92 %
Halanaerobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halanaerobiaceae → Halanaerobium	0.92 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.92 %
Desulfonatronum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfonatronaceae → Desulfonatronum	0.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.59 %
Desulfonatronospira thiodismutans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfohalobiaceae → Desulfonatronospira → Desulfonatronospira thiodismutans	0.92 %
Halanaerobium hydrogeniformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halanaerobiaceae → Halanaerobium → Halanaerobium hydrogeniformans	0.92 %
Gloeobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter	0.92 %
Desulfonatronum lacustre	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfonatronaceae → Desulfonatronum → Desulfonatronum lacustre	0.92 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.92 %
Thiocapsa marina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina	0.92 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.59 %
Gloeobacter kilaueensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter → Gloeobacter kilaueensis	0.92 %
Desulfonatronospira thiodismutans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfohalobiaceae → Desulfonatronospira → Desulfonatronospira thiodismutans	0.92 %
Halanaerobium hydrogeniformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halanaerobiaceae → Halanaerobium → Halanaerobium hydrogeniformans	0.92 %
Desulfonatronum lacustre	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfonatronaceae → Desulfonatronum → Desulfonatronum lacustre	0.92 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.92 %
Thiocapsa marina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina	0.92 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2246035	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14294447	Not Available	615	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101661972	Not Available	682	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104831326	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300000550\|F24TB_12518836	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300000559\|F14TC_100352515	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300000559\|F14TC_110731682	Not Available	766	Open in IMG/M
3300000787\|JGI11643J11755_11393644	Not Available	646	Open in IMG/M
3300000789\|JGI1027J11758_10861050	Not Available	599	Open in IMG/M
3300000953\|JGI11615J12901_11711667	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfohalobiaceae → Desulfonatronospira → Desulfonatronospira thiodismutans	526	Open in IMG/M
3300001431\|F14TB_104446822	Not Available	658	Open in IMG/M
3300004062\|Ga0055500_10171678	Not Available	522	Open in IMG/M
3300004480\|Ga0062592_101292436	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005093\|Ga0062594_100505753	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300005294\|Ga0065705_10485017	Not Available	792	Open in IMG/M
3300005295\|Ga0065707_10346441	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300005332\|Ga0066388_102772991	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300005332\|Ga0066388_102772991	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300005438\|Ga0070701_10034815	All Organisms → cellular organisms → Bacteria	2525	Open in IMG/M
3300005468\|Ga0070707_101654745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	607	Open in IMG/M
3300005545\|Ga0070695_101284453	Not Available	604	Open in IMG/M
3300005549\|Ga0070704_100126032	All Organisms → cellular organisms → Bacteria	1976	Open in IMG/M
3300005549\|Ga0070704_100965821	All Organisms → cellular organisms → Bacteria → Proteobacteria	769	Open in IMG/M
3300005577\|Ga0068857_101105897	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300005598\|Ga0066706_10826859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina	728	Open in IMG/M
3300005617\|Ga0068859_101255231	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300005713\|Ga0066905_100275758	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300005719\|Ga0068861_101846179	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005764\|Ga0066903_100085982	All Organisms → cellular organisms → Bacteria	4143	Open in IMG/M
3300005764\|Ga0066903_100085982	All Organisms → cellular organisms → Bacteria	4143	Open in IMG/M
3300005840\|Ga0068870_10355505	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300005844\|Ga0068862_100733114	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300006844\|Ga0075428_100170973	All Organisms → cellular organisms → Bacteria	2355	Open in IMG/M
3300006845\|Ga0075421_100982757	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300006845\|Ga0075421_101316223	Not Available	799	Open in IMG/M
3300006847\|Ga0075431_101088911	Not Available	764	Open in IMG/M
3300006871\|Ga0075434_100182930	All Organisms → cellular organisms → Bacteria	2117	Open in IMG/M
3300006871\|Ga0075434_102192724	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300006880\|Ga0075429_100124090	All Organisms → cellular organisms → Bacteria	2258	Open in IMG/M
3300006903\|Ga0075426_10299344	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300009100\|Ga0075418_10486319	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300009147\|Ga0114129_10013971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter → Gloeobacter kilaueensis	11441	Open in IMG/M
3300009147\|Ga0114129_10285699	All Organisms → cellular organisms → Bacteria → Acidobacteria	2203	Open in IMG/M
3300009147\|Ga0114129_10325328	All Organisms → cellular organisms → Bacteria	2043	Open in IMG/M
3300009147\|Ga0114129_10461958	All Organisms → cellular organisms → Bacteria → Acidobacteria	1663	Open in IMG/M
3300009147\|Ga0114129_10528414	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300009148\|Ga0105243_11745154	Not Available	652	Open in IMG/M
3300009162\|Ga0075423_10038280	All Organisms → cellular organisms → Bacteria	4893	Open in IMG/M
3300009162\|Ga0075423_10097411	All Organisms → cellular organisms → Bacteria	3075	Open in IMG/M
3300009162\|Ga0075423_12456034	Not Available	568	Open in IMG/M
3300009174\|Ga0105241_11225099	Not Available	712	Open in IMG/M
3300009553\|Ga0105249_11106543	Not Available	862	Open in IMG/M
3300010046\|Ga0126384_10207879	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300010046\|Ga0126384_11441738	Not Available	643	Open in IMG/M
3300010359\|Ga0126376_12424320	Not Available	572	Open in IMG/M
3300010362\|Ga0126377_10019906	All Organisms → cellular organisms → Bacteria	5499	Open in IMG/M
3300010366\|Ga0126379_10566998	Not Available	1217	Open in IMG/M
3300010366\|Ga0126379_11148712	Not Available	883	Open in IMG/M
3300010391\|Ga0136847_13636190	All Organisms → cellular organisms → Bacteria	4485	Open in IMG/M
3300010397\|Ga0134124_10000270	All Organisms → cellular organisms → Bacteria	46474	Open in IMG/M
3300010398\|Ga0126383_12564730	Not Available	594	Open in IMG/M
3300010399\|Ga0134127_10302789	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300010399\|Ga0134127_13420196	Not Available	520	Open in IMG/M
3300010400\|Ga0134122_12609295	Not Available	556	Open in IMG/M
3300010400\|Ga0134122_12874485	Not Available	535	Open in IMG/M
3300010401\|Ga0134121_11120918	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300010403\|Ga0134123_10356770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1322	Open in IMG/M
3300011270\|Ga0137391_10605579	Not Available	918	Open in IMG/M
3300011414\|Ga0137442_1086670	Not Available	673	Open in IMG/M
3300011419\|Ga0137446_1152445	Not Available	557	Open in IMG/M
3300012201\|Ga0137365_10140238	All Organisms → cellular organisms → Bacteria → Acidobacteria	1817	Open in IMG/M
3300012203\|Ga0137399_11029973	Not Available	693	Open in IMG/M
3300012205\|Ga0137362_10313662	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300012205\|Ga0137362_10516758	Not Available	1032	Open in IMG/M
3300012206\|Ga0137380_11188256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Halanaerobiales → Halanaerobiaceae → Halanaerobium → Halanaerobium hydrogeniformans	648	Open in IMG/M
3300012354\|Ga0137366_10021953	All Organisms → cellular organisms → Bacteria → Acidobacteria	4973	Open in IMG/M
3300012354\|Ga0137366_10284206	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1220	Open in IMG/M
3300012582\|Ga0137358_10109110	Not Available	1877	Open in IMG/M
3300012923\|Ga0137359_10058868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3348	Open in IMG/M
3300012930\|Ga0137407_11058094	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300012948\|Ga0126375_10073569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1927	Open in IMG/M
3300012961\|Ga0164302_11432193	Not Available	566	Open in IMG/M
3300013297\|Ga0157378_12967440	Not Available	526	Open in IMG/M
3300014883\|Ga0180086_1117577	Not Available	684	Open in IMG/M
3300015264\|Ga0137403_11314208	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfonatronaceae → Desulfonatronum → Desulfonatronum lacustre	570	Open in IMG/M
3300018052\|Ga0184638_1076340	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1227	Open in IMG/M
3300018075\|Ga0184632_10320126	Not Available	669	Open in IMG/M
3300018084\|Ga0184629_10424374	Not Available	698	Open in IMG/M
3300018084\|Ga0184629_10429749	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300018433\|Ga0066667_11449534	Not Available	605	Open in IMG/M
3300018482\|Ga0066669_12041690	Not Available	538	Open in IMG/M
3300019883\|Ga0193725_1089754	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300024279\|Ga0247692_1002254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3614	Open in IMG/M
3300025913\|Ga0207695_11755910	Not Available	501	Open in IMG/M
3300025935\|Ga0207709_11607801	Not Available	540	Open in IMG/M
3300025961\|Ga0207712_10820862	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300026116\|Ga0207674_10685329	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300026116\|Ga0207674_11516646	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300026118\|Ga0207675_101772541	Not Available	637	Open in IMG/M
3300026374\|Ga0257146_1012896	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300026497\|Ga0257164_1011037	Not Available	1155	Open in IMG/M
3300027909\|Ga0209382_11176600	Not Available	786	Open in IMG/M
3300028146\|Ga0247682_1003099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2972	Open in IMG/M
3300028380\|Ga0268265_10353402	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300031538\|Ga0310888_11015142	Not Available	522	Open in IMG/M
3300032075\|Ga0310890_10561469	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300033004\|Ga0335084_11536904	Not Available	657	Open in IMG/M
3300034155\|Ga0370498_018030	All Organisms → cellular organisms → Bacteria → Proteobacteria	1487	Open in IMG/M
3300034257\|Ga0370495_0324731	Not Available	514	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.81%
Host-Associated	Host-Associated	31.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.55%
Plants	Host-Associated → Plants	31.19%
Aquatic	Environmental → Aquatic	8.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.26%
Sediment	Environmental → Aquatic → Sediment	6.42%
Freshwater	Environmental → Aquatic → Freshwater	0.92%
Marine	Environmental → Aquatic → Marine	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.94%
Loam	Environmental → Terrestrial → Soil → Loam	12.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.42%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.75%
Lake	Environmental → Aquatic → Freshwater → Lake	0.92%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.83%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.92%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	16.51%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.34%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	6.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.67%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.92%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011414	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300034155	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17	Environmental	Open in IMG/M
3300034257	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_22460352	3300000033	Soil	MGTTLNPEITALRDKVEEHGKELAEMRGTVNQLNNIVSASVRQSIWQLIALLVSLCVTIAGGLAYQGTMIDKRFEQIEKRFEHLEKRIEQSEKNITARFEDLKQEVRAQRK*
ICChiseqgaiiFebDRAFT_142944471	3300000363	Soil	MGTTLNPEITALRDKVEEHGKELAEMRGTVNQLNNIVSASVRQSIWQLIALLVSLCVTIAGGLAYQGTMIDKRFEQIEKRFE
INPhiseqgaiiFebDRAFT_1016619722	3300000364	Soil	MSTALNPEIAALREKVEEHARELAEMRGSVNQLNNIVSASVRQSIWQVIALIVSLCISIAGGLAYQANMIDKRLDQLEKRIDQSEKNITARFEDFKREVEKRIDQSEKRIDQSEKNITARFEDLKQEIRTRRK*
INPhiseqgaiiFebDRAFT_1048313261	3300000364	Soil	MSTTFNPEIAALRDKVEEHTKELAEMRGNLHQLDKIIGATVRQSIWQLIALIVTLLVAVGGGLAYQTSVIDKRFEQIERRFELSDKNHRDRFEQIEKRIEQS
F24TB_125188362	3300000550	Soil	IALIVSLCISIAGVLAYQSNMMDKRLDQFDKRFEQIERRIELSEKNLEKRIELSEKNITARFEDLKQEVRARRK*
F14TC_1003525152	3300000559	Soil	MSTALNPEIAMLSDKVEEHARELAEMRGTVNQLNNIVSASVRQSIWQVIALIVSLCISIAGGLAYQSNMMDKRLDQFDKRFEQIERRIELSEKNLEKRIELSEKNITARFEDLKQEVRARRK*
F14TC_1107316822	3300000559	Soil	MSTTFNPEIAALRDKVEEHSRELAEMRGNLHQLDKIIGATVRQSVWQLIVLIVTLLVAIGGGLAYQTNSIDNRIEQLERSSNTRFEMIEKRIEQSEKNITARFDDLKQEVRAQRK*
JGI11643J11755_113936442	3300000787	Soil	MGTTLNPEITALRDKVEEHGKELAEMRGTVNQLNKIVSASVRQSIWQLIALLVSLCVTIAGGLAYQGSMIDKRFEQIEKRFEHLEKRIEQSEKNITARFEDLKQEVRAQRK*
JGI1027J11758_108610501	3300000789	Soil	MSTTFNPEIAALRDKVEEHTKELAEMRGNLHQLDKIIGATVRQSIWQLIALIVTLLVAVGGGLAYQTSVIDKRFEQIERRFELSDKNHRDRFEQIEKRIEQ
JGI11615J12901_117116671	3300000953	Soil	MSTLNPEIAALRERIEAQGKELAEIRGSVHQLDKIIGATVRQSIWQLIALMVTLLVAIGGGLAYQTSMIDKRFDQFEKRFVQSDKNSGDRFEQIEKRIEQSERNMTQRFEDFEKNMAARFDDLKQEVRARRK*
F14TB_1044468222	3300001431	Soil	MSTTLNPEIAALREKVEAHGKELAEMRGTVNQLNKIVSASVRQSVWQLIALIVSLCVTIAGGLAYQGNMIEKRFEQIEKRFEQSDKNFGHRFEQLEKRIEQFETNITARFEDLKEEVRAQRK*
Ga0055500_101716782	3300004062	Natural And Restored Wetlands	MRGNLHQLDKIIGATVRQSVWQLIALVVTLLVAITGGLAYQTSAIDKRIDQMEKSSNTRFEVIEKQIEQSEKNMTGRFEDFEKNISARFEDLKQEVRAQRK*
Ga0062592_1012924362	3300004480	Soil	CVKELAEMRGTVNQLNKIVSASVRQSIWQLIALIVSLCVTIAGGLAYQGSMIDKRFEQIEKRIEQSEQNITARFEDLKQEVRAQRK*
Ga0062594_1005057532	3300005093	Soil	MSTTLNPEIAALREKVEEHGKELAEMRGTVNQLNNIVSASVRQSIWQLIALLVSLCVTIAGGLAYQGTMIDKRFEQIEKRFEQLERRIEQSEKNITARFEDLKQEVRAQRK*
Ga0065705_104850171	3300005294	Switchgrass Rhizosphere	VRSWARSKEPLSTTFNPEIADLRNKVEGCVKELAEMRGTVNQLNKIVSASVRQSIWQLIALIVSLCVTIAGGLAYQGSMIDKRFEQIEKRIEQSEQNITARFEDLKQEVRAQRK*
Ga0065707_103464412	3300005295	Switchgrass Rhizosphere	IADLRNKVEGCVKELAEMRGTVNQLNKIVSASVRQSIWQLIALIVSLCVTIAGGLAYQGSMIDKRFEQIEKRIEQSEQNITARFEDLKQEVRAQRK*
Ga0066388_1027729911	3300005332	Tropical Forest Soil	MSTTLNPEVAVLRDKIEEHGKELAEMRGSLNQLNNIVNASVRQSIWQLIALIVSLCISIAGGLAYQGNMIDKRLDQFEKRFEERIDQSEKNITARFEDLKQEVRDLKLEVRAQRR*
Ga0066388_1027729912	3300005332	Tropical Forest Soil	LLKQYHIASQSIWQCAALIVSLCLSIAGGLAYQGNMIDKRLAYQGIMNDQRLDQFEKRFEQLEKRIDQSEKNITARFEDLKQEVRAQRK*
Ga0070701_100348151	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	ELAEMRGTVNQLNKIVSTSIRQSIWQLIALLVSLCVTIAGGLAYQGSMIDKRFEQIEKRFEHLEKRIEQSEKNITARFEDLKQEVRAQRK*
Ga0070707_1016547451	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSTTFNPEVAALRKEVAEYGKELAEMRGTVNQLNKIVSASVRQSIWQLIALIVTLLVAIGGGLAYQTSMIEKRIEQ
Ga0070695_1012844532	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSPTLNPEIAALRDKVEEHGKELAEMRGNLNQLDKIIGATVRQSIWQLIVLIVTLVVAIGGGLAYQTRMIDKRIEQIEKRVEQSEKNMTARFEDLGKSMITRFEDLEKNMTARFEDLKQEVRAQRK*
Ga0070704_1001260322	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSPTLNPEIAALRDKVEEHGKELAEMRGNLNQLDKIIGATVRQSIWQLIALFVTLVVAIGGGLAYQTRMIDKRIEQIEKRVEQSEKNMTARFEDLGKSMTTRFEDLEKNMTTRFEDLKQEVRAQRK*
Ga0070704_1009658212	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	EMRGSLHQLEKIIASTVRQSIWQLIALIVTLLVAIGGGLAYQTSMIDKRIEQLERSSNTRFEMIEKRFQQTDKNIGERFDQIDKRIEQSEKNITARFEDLEQEVRGGRR*
Ga0068857_1011058971	3300005577	Corn Rhizosphere	MSTTFNPEIAALREKVEEHARELAEMRGTVNQLNKIVSASVRQSIWQLIALLVSLCVTIAGGLAYQGSMIDKRFEQIEKR
Ga0066706_108268591	3300005598	Soil	MSTTFNPEIAALRDKVEEHTKELAEMRGNLHQLDKIIGATVRQSIWQLIAVIVTLLVAIAGGLAYQTSAIDKRIEQMERSSNTRFEMIEKRIDESARNMTSRFEDLEKNMTSRFEDL
Ga0068859_1012552312	3300005617	Switchgrass Rhizosphere	ALREKVEEHTKELAEMRGNLYQLDKIIGATVRQSIWQLIALFVTLVVAIGGGLAYQTRMIDKRIEQIEKRVEQSEKNMTARFEDLGKSMTTRFEDLEKNMTTRFEDLKQEVRAQRK*
Ga0066905_1002757582	3300005713	Tropical Forest Soil	MSAALNPERIALRDRVEEHGKELAEMRGSLNQLNNIVSGSVRQSIWQVIALIVSLCISIAGGLVYQGNMIDKRLDQFERRFEQFEKRIDQSEKNITARFEDLKQEVRDLKLEVHAQRK*
Ga0068861_1018461791	3300005719	Switchgrass Rhizosphere	MSTAFNPEIAALREKVEEHGKELAEMRGTVNQLNKIISTSVRQSIWQLIALIVTLLVAIGGGLAYQTSMIDKRFEQFEKRFEQS
Ga0066903_1000859823	3300005764	Tropical Forest Soil	MRGSLNQLNNVVNASVRQSIWQLIALIVSLCLSIAGGLAYQGNMIDKRIDQRLDQFEKRFEQLEKRIDQSEKNITARFEDLKQEVRAQRK*
Ga0066903_1000859824	3300005764	Tropical Forest Soil	MREGPNQLNNIVNASVRQSIWQLIALIVSLCISIAGGLAYQGNMIDKRLAYQGIMIDQRLDQFEKRFEQIEKRIDQSEKDINARFEDLKQEVRAQRK*
Ga0068870_103555052	3300005840	Miscanthus Rhizosphere	MSTTLNPEIAALRDKVEEHGKELAEMRGNLNQLDKIIGATVRQSIWQLIALFVTLVVAIGGGLAYQTRMIDKRIEQIEKRVEQSEKNMTARFEDLGKSMITRFEDLEKNMTARFEDLKQEVRAQRK*
Ga0068862_1007331142	3300005844	Switchgrass Rhizosphere	PELAAQRAKVEEHGKELAEMRGSLHQPEKIIASTVRQSIWQLIALIVTLLVAIGGGLAYQTSMIDKRIEQLERSSNTRFEMIEKRWQQTDKNIGERFDQIDQRIEQSEKNITARFEDLKQEVRGGRR*
Ga0075428_1001709732	3300006844	Populus Rhizosphere	MRGTVNQLNKIVSASVRQSIWQLIALIVSLCVTIAGGLAYQGSMIDKRFEQIEKRIEQSEQNITARFEDLKQEVRAQRK*
Ga0075421_1009827572	3300006845	Populus Rhizosphere	MSTTFNPEIAALREKVEEHARELAEMRGTVNQLNKIVSASVRQSIWQLIALLVSLCVTIAGGLAYQGSMIDKRFEQIEKRIEQSDRNMSSRFEDLEKTMTTRFEDLKQEVRARYK*
Ga0075421_1013162232	3300006845	Populus Rhizosphere	MSTTFHPDVAALRKELEGYGKELAEMRGSVNQLSQIVNASVRQSVWQLIALIVSLCMTIAGGLAYQASVMDKRFEQIEKRLEQSERNMTSRFEDLEKNMTSRFGDLEKNMTSRFEDLKEEVRAQRK*
Ga0075431_1010889112	3300006847	Populus Rhizosphere	LEGYGKELAEMRGSVNQLSQIVNASVRQSVWQLIALIVSLCITIAGGLAYQASVMDKRFEQIEKRLEQSERNMTSRFEDLEKNMTSRFGDLEKNMTSRFEDLKEEVRAQRK*
Ga0075434_1001829302	3300006871	Populus Rhizosphere	MSTTFNPEVAALRKEVAEYGKELAEMRGTVNQLNKIVSASVRQSIWQLIALIVTLLVAIGGGLAYQTSMIEKRIEQVEKRIEQAEKNITARFENLKQEVRVQRK*
Ga0075434_1021927241	3300006871	Populus Rhizosphere	SVSQLDKIVAATTRQSIWQLIALIITLCLAITGGLAYQTTMIDKRIDQIEKRIEQSEKNIISRFEDLKQEVRAQRK*
Ga0075429_1001240903	3300006880	Populus Rhizosphere	MSTTFNPEIAALREKVEEHARELAEMRGTVNQLNKIVSASVRQSIWQLIALLVSLCVTIAGGLAYQGSMIDKRFEQIEKRFERSDNNFGDRF
Ga0075426_102993442	3300006903	Populus Rhizosphere	MSTTFNPEVAALRKEVAEYGKELAEMRGTVNQLNKIVSASVRQSIWQLIALIVTLLVAIGGGLAYQTSMIEKRIEQVEKRIEQAEKNITARFENLKQEVRVLRK*
Ga0075418_104863192	3300009100	Populus Rhizosphere	LEGYGKELAEMRGSINQLSQIVNASVRQSVWQLIALIVSLCMTIAGGLAYQASVMDKRFEQIEKRLEQSERNMTSRFEDLEKNMTSRFGDLEKNMTSRFEDLKEEVRAQRK*
Ga0114129_100139713	3300009147	Populus Rhizosphere	MSTTLNPEISALRDKVEEHGKELAEMRGSLHQLDKIIGATVRQSIWQLIALLVTLFIAIAGGLAYQTSAIDKRIEQMEKRIEQSEKNMTSRFDDLDRNMTTRFEDFEKNMTSRFEDLKQEVRAQRK*
Ga0114129_102856992	3300009147	Populus Rhizosphere	LEGYGKELAEMLGSVNQLSQIVNASVRQSVWQLIALIVSLCITIAGGLAYQASVMDKRFEQIEKRLEQSERNMTSRFEDLEKNMTSRFGDLEKNMTSRFEDLKEEVRAQRK*
Ga0114129_103253282	3300009147	Populus Rhizosphere	MSTAFNPEIAALREKVEEHGKELAEMRGTVNQLNKIVSASVRQSIWQLIALIVSLCVTIAGGLAYQGSMIDKRFEQIEKRIEQSEQNITARFEDLKQEVRAQRK*
Ga0114129_104619581	3300009147	Populus Rhizosphere	MSTLNPEIAALRERIEAQGKELAEIRGSVHQLDKIIGATVRQSIWQLIALIVTLLLSLGGGLAYQTSMMEKRIEQVEKRIEQSEKNMTGRFEDLEKNMTGRFEDLEKNITARFDDLKQEVRAQRK*
Ga0114129_105284142	3300009147	Populus Rhizosphere	MSTTVIPEVAALRKEVAEYGKELAEMRGTVNQLNKIVSASVRQSIWQLIALIVTLLVAIGGGLAYQTSMIEKRIEQVEKRIEQAEKNITARFEDLKQEVRAQRK*
Ga0105243_117451541	3300009148	Miscanthus Rhizosphere	MSTALNPEIATLRDKVEEHGRELAEMRGTLNHLSNIVSASVRQSIWQVIALIVSLCISIAGGLAYQSNMMDRRLDQFEKRFEQIERRIELSEKNMTARFEDLKQEVRTRRK*
Ga0075423_100382803	3300009162	Populus Rhizosphere	MSTTLNPEIAALRERIEAQGKELAEIRGSVHQLDKIIGATVRQSIWQLIALIVTLLLSLGGGLAYQTNMMEKRIEQVEKRIEQSEKNMTGRFEDLEKNITARFDDLKQEVRAQRQ*
Ga0075423_100974112	3300009162	Populus Rhizosphere	MSTTFNPEVAALRKEVAEYGKELAEMRGTVNQLNKIVSASVRQSIWQLIALIVTLLVAIGGGLAYQTSMIEKRIEQVEKLIEQAEKNITARFEDLKQEVRVQRK*
Ga0075423_124560341	3300009162	Populus Rhizosphere	LNPEVAALRDKVEEHGKELAEMRGSLNQLNNIVNASVRQSIWQLIALIVSLCISIAGGLAYQGNMIDKRLDQFEKRFEERIDQSEKNMTARFEDLKQEVRDLKLE
Ga0105241_112250992	3300009174	Corn Rhizosphere	MSTTVNPEIAALRDKVEEHGKQLAEMRGSVHQLSKIIGATVRQSIWQLIALIVSLCLAIAGGLAYQTNVIDRRFEQIEKRFEQVERRIELSEKNINARLEQSEKNINARFEDLKQEVRAQRK*
Ga0105249_111065431	3300009553	Switchgrass Rhizosphere	MSTTLNPEIAALRDKVEEHGKELAEMRGNLNQLDKIIGATVRQSIWQLIALIVTLVVAIGSGLAYQTRMIDKRIEQIEKRVEQSERNMTARFEDLGKSMITRFEDLEKNMTARFEDLKQEVRAQRK*
Ga0126384_102078792	3300010046	Tropical Forest Soil	MSTALNPEIAALREKVAEQGKEVAEMRGSLNQLNNIVNASVRQSIWQVIALIVSLCVSIAEGLVYQSNMIDKRLDQFEKRFEQLEKRIYQSEKNITACLEDLKQEVRAQRK*
Ga0126384_114417381	3300010046	Tropical Forest Soil	QSIWQLIALIVSLCISIAGGLAYQGNMIDKRLAYQGIMIDQRLDQFEKRFEQIEKRIDQSEKDINARFEDLKQEVRAQRK*
Ga0126376_124243201	3300010359	Tropical Forest Soil	NNIVSGSVRQSIWQVIALIVSLCISIAGGLVYQGNMIDKRLDQFERRFEQFEKRIDQSEKNITARFEDLKQEVRDLKLEVHAQRK*
Ga0126377_100199061	3300010362	Tropical Forest Soil	SIWQLIVLISSLCLSIAGGLAYQGNMIDKRLVYQEIMIDQRLDQFEKRFEQLEKRIDQSEKNMTSRFEDLKQEVRAQRK*
Ga0126379_105669981	3300010366	Tropical Forest Soil	MSTALNPEIAALRDKVEEHARELAEMRGSVNQLNNTIRASVRQSIWQLIAMIVSLCLSIAGGLAYQANMIDKRLDRLEKRIDQSEKNITVRFEDFKQEVEKRLDQFEKRTDQSEKNITARFEDLKQEVRAKRK*
Ga0126379_111487122	3300010366	Tropical Forest Soil	MRGSLNQLNNVVNASVRQSIWQLIALIVSLCISIAGGLAYQGNMIDKRLAYQGIMIDQRLDQFEKRFEQIEKRIDQSEKDINARFEDLKQEVRAQRK*
Ga0136847_136361904	3300010391	Freshwater Sediment	MSTTINPEIADLREKVEGCVKELAEMRGTVNQLNKVVSASVRQSIWQLIALIVSLCLTISGGLAYQTSVMDKRFEQFEKRIEQSEKNMTARFEDLEKNITARFEDLKQEVRAQRK*
Ga0134124_1000027012	3300010397	Terrestrial Soil	MSATLNPEIAALREKVEAQGMELAEIRGSVHQLDKIIGATVRQSVWQLIALIGTLLVAIAGGLAYQTSSIDKRIEQMERSSNTRFEMIEKQIEQSEKNITARFEDLKQEVRAQRK*
Ga0126383_125647301	3300010398	Tropical Forest Soil	MSTTLNPEVAALRDKVEEHGKELAEMRGSLKQLNNMVNASVHQSIWQLIALIISLCLSIAGGLAYQGNMIDKRLDQFEKRFEERIDQSEKNMTARFEDLKQEVRDLKLEVRARRK*
Ga0134127_103027892	3300010399	Terrestrial Soil	MSTTINPELAAQRAKVEEHGKELAEMRGSLHQPEKIIASTVRQSIWQLIALIVTLLVAIGGGLAYQTSMIDKRIEQLERSSNTRFEMIEKRFQQTDKNIGERFDQIDQRIEQSEKNITARFEDLKQEVRGGRR*
Ga0134127_134201961	3300010399	Terrestrial Soil	MSTTVNPEIAALRDKVEEHGKQLAEMRGSAHQLDKIIGATVRQSIWQLIALIVSLCLAIAGGLAYQTNVTDRRFEQIEKRFEQVER
Ga0134122_126092951	3300010400	Terrestrial Soil	MSTTVNPEIAALRDKVEEHGKQLAEMRGSVHQLDKIIGATVRQSIWQLIALIVSLCLAIAGGLAYQTNVIDRRFEQIEKRCEQVERRI
Ga0134122_128744851	3300010400	Terrestrial Soil	MSTTVNPEIAALRDKVEEHGKQLAEMRGSVHQLSKIIGPTVRQSIWQLIALIVSLCLAIAGGLAYQTNVIDRRFEQIEKRCEQVERRIELSEKNINARLEQSEKNINARLEDLKQEVRAQRK*
Ga0134121_111209181	3300010401	Terrestrial Soil	MSTTLNPEIADLREKVDGCVKELAEMRGTVNQLNSIVSNSVRQSIWQLIALLVTLFMAIAGGLAYLTTSIDKRIEQMERSSNARLEMLEKRIDQSDRNMTGRLEDLEKNITAR
Ga0134123_103567702	3300010403	Terrestrial Soil	MRGSLHQPEKIIASTVRQSIWQLIALIVTLLVAIGGGLAYQTSMIDKRIEQLERSSNTRFEMIEKRFQQTDKNIGERFDQIDQRIEQSEKNITARFEDLKQEVRGGRR*
Ga0137391_106055791	3300011270	Vadose Zone Soil	EIAIVYSRSLMSATLNPEIADLRVKVDGCVKELAEMRGTVNQLNKIVSTSVRQSIWQLIALLVSLCVTIGGGLAYQASVIDKRFDQIEKRFEQSDNNFGNRFEQLEKRINQSEKNITARFEDFERNMTARFEDLKQEVRSQRK*
Ga0137442_10866702	3300011414	Soil	MSTTFNPEIAALRDKVEEHSKELAEMRGTVNQLTKIVSASVRQSIWQLIAVIVTLLVAIGGGLAYQTSAIDKRIEQMERSSNTRFEMIEKQIEQSDKNFGDRFGQLEKRIEQSDKNMAARFEDLKQEVRAQRK*
Ga0137446_11524451	3300011419	Soil	MRVRSWARTKEPYEHNVNPEISALREELAEMRGTVNQLNKIVSASVRQSIWQLIAVIVTLLVAIGGGLAYQTSAIDKRIEQMERSSNTRFEMIEKQIEQSDKNFGDRFEQLEKRIEQSDKNMAARFEDLKQEVRAQRK*
Ga0137365_101402382	3300012201	Vadose Zone Soil	MSSTFNPEIAALRDKVEEQSKELAEMRGNLHQLDKIIGATVRQSIWQLIALIVTLLVAVGGGLAYQTSVIDKRFEQIEKRFELSDKNHSDRFEQIERRIEQSEKNMNGRFEDFEKNMTARFEDLKQEVRARRK*
Ga0137399_110299731	3300012203	Vadose Zone Soil	MSATLNPEIADLREKVDGCVKELAEMRGTVNQLNKIVSASVRQSIWQLIALLVTLFVAIAGGLAYLTSTIDKRIEQMERSSNTRFEMLEKRIDQSEKNMTGRLEDVEKNLTSRFEDLKQEVRAQRK*
Ga0137362_103136623	3300012205	Vadose Zone Soil	MSTTFNPEVAALRKEVEEYGKELAEMRGTVNQLNKIVSASVRQSIWQLIAVFVSLCVTIAGGLAYQTSAIDKRIEQLERSSNTRFEQIEKRFEQSDKNMAARFEDLKQEVRGQRK*
Ga0137362_105167582	3300012205	Vadose Zone Soil	MSTTLNPEITALREKVEAQGMELAEIRGSVHQLDKIIGATVRQSIWQLIALMGTLLVAIAGGLAYQTSSIDKRIEQMERSSNTRFEMIEKQIEQSEKNITARFEDLKQEVRAQRK*
Ga0137380_111882561	3300012206	Vadose Zone Soil	MSTTINTEIADLRQKVEGCVKELAEMRGTGNQLNQIVSASVRQSIWQLIVVFVSLCVTIAGGLAYQTSAIDKRIEQLERSSNTRYEKIEKRFEQSDKNFGDRFEQLEKRIEQSDKNMAARFEDLKQEVRAQRK*
Ga0137366_100219531	3300012354	Vadose Zone Soil	MSTTFNPEIAALRDKVEEQHTKELAEMRGNLHQLDKIIGATVRQSIWQLIALIVTLLVAIAGGLAYQTSAIDKRIEQMDKSSNTRFEMIQKSIEQSEKNMTGRFADLEKNITARFED
Ga0137366_102842062	3300012354	Vadose Zone Soil	MRGTVNQLNKIVSASVRQSIWQLIALILTLLVAIGGGLAYQTSMIQKRIEQVEKRIEQSEKNITARFEDLKQEVRAQRK*
Ga0137358_101091102	3300012582	Vadose Zone Soil	MRGAVNQINSIVSNSVRQSIWQLIALLVTLFVAIAGGLAYLTTSIDKRIEQMERSSNTRFEMLEKRIDQSDKNMNGRLEDLEKNITARFEDLKQEVRAQRK*
Ga0137359_100588684	3300012923	Vadose Zone Soil	MSTTFNPEVAALRKEVEEYGKELAEMRGTVNQLNKIVSASVRQSIWQLIAVFVSLCVTIAGGLAYQTSAIDKRIEQLERSSNTRYEQIEKRFEQSDKNFGDRFEQLEKRIEQSDKNMAARFEDLKQEVRGQRK*
Ga0137407_110580942	3300012930	Vadose Zone Soil	VRPSGKRYGKELAEMRGTVNQLNKIVSASVRQSIWQLIALIVTLLVAIGGGLAYQTSMIEKRIEQVEKRIEQSEKNITARFEDLRQEVRAQRK*
Ga0126375_100735691	3300012948	Tropical Forest Soil	MSTTLNPEVAALRDKVEEHGKELAEMRGSLNQLNNIVNASVRQSIWQLIVLIASLCLSIAGGLAYQGNMIDKRLDQFERRFEQLEKRIDQSERNMAARFEDLKQEVRDLKLEVHAQRK*
Ga0164302_114321931	3300012961	Soil	MSTTFNPEIAALREKVEAQGMELAEIRGSVHQLNKIIGATVRQSIWQLIALIVTLLVAIAGGLAYQTIAIDKRIEQMEKSSNTRFEMIE
Ga0157378_129674401	3300013297	Miscanthus Rhizosphere	KELAEMRGTVNQLNSIVSNSVRQSIWQLIALLVTLFMAIAGGLAYLTTSIDKRIEQMERSSNARLEMLEKRIDQSDRNMTGRLEDLEKNITARFEDLKQEVRAQRK*
Ga0180086_11175771	3300014883	Soil	MSTTFNPEIADLRQKVEGCVKELAEMRGTVNQLNKIVSASVRQSIWQLIALLVSLCVTIAGGLAYQGSVMDKRYEQIEKRFEQSDKNFGGRFEQLEKRIEQSDKNMAARFEDLKQEVRAQRK*
Ga0137403_113142081	3300015264	Vadose Zone Soil	MSTTFNPEVAALRKEVEEYGKELAEMRGTVNQLNKIVSASVRQSIWQLIAVFVSLFVTIAGGLAYQTSAIDKRIEQLERSSNTRFEQIEKRFEQSDKNFGDRFEQLEKRIEQSDKNMAARFEDLKQEVHAQHK*
Ga0184638_10763403	3300018052	Groundwater Sediment	MSTTFNPEIAALRKEVEGFGKELAEMRGTVNQLNKIVSASVRQSIWQLIALLVSLCVTIAGGLAYQGSVMDKRYEQIEKRIEQSEKNMTARFEDFGKNITARFEDLKQEVRAQRK
Ga0184632_103201261	3300018075	Groundwater Sediment	EHGKELAEMRGTVNQLNKIVSASVRQSIWQLIALLVSLCVTIAGGLAYQGSVMDKRYEQIEKRIEQSEKNMTARFEDFGKNITARFEDLKQEVRAQRK
Ga0184629_104243742	3300018084	Groundwater Sediment	MSTTVNPEIAALRDKVEEHGKELAEMRGTVHQLDKIIGATVRQSIWQLIALIVTLLVAIAGGLAYQTSAIDKRIEQMEKSSNTRFEMIEKRIEQSEKNIIARFEDLKQEVRAQRK
Ga0184629_104297492	3300018084	Groundwater Sediment	GTVNQLNRIVSASVRQSIWQLIALLVSLCVTIAGGLAYQGSVMDKRFEQIEKRIQQSEKNITARFEDLKQEVRAQRK
Ga0066667_114495342	3300018433	Grasslands Soil	MELAEIRGSVHQLDKIIGATVRQSIWQLIALIATLLVAIAGGLAYQTIAIDKRIEQMEKSSNTRFEMIEKRIEQSEKNITARFEDLGKNMTARFEDLKQEVRAQRK
Ga0066669_120416901	3300018482	Grasslands Soil	MSTTLNPEIADLRQKVEAQGMELAEIRGSVHQLDKIIGATVRQSVWQLIALIVTLLVAIAGGLAYQTRTIDKRIEQLEKSSNTRFELIEKRIDQSEQN
Ga0193725_10897542	3300019883	Soil	MSTTVNPEIAALRDKVEEHGKQLAEMRGSVHQLDRIIGATVRQSIWQLIALIVTLLVAITGGLAYQTNAIDKRIEQMEKSSNTRFELIDKRIEQSEKNIIARFEDLKQEVRAQRK
Ga0247692_10022542	3300024279	Soil	MSTTFNPEVAALRKEVREYGKELAEMRGTVNQLNKIVSASVRQSIWQLIAVLVSLCVTIAGGLAYQGSVMDKRYEQIEKRFEQSDKNFGDRFEQLERRIEQSERNITARFEDLKQEVRAQRK
Ga0207695_117559101	3300025913	Corn Rhizosphere	MSTAFNPEIAALREKVEEHGKELAEMRGTVNQLNKIISTSVRQSIWQLIALIVTLLVAIGGGLAYQTSMIDKRFEQFEKRYEQSDKNFGDRF
Ga0207709_116078011	3300025935	Miscanthus Rhizosphere	MSTALNPEIATLRDKVEEHGRELAEMRGTLNHLSNIVSASVRQSIWQVIALIVSLCISIAGGLAYQSNMMDRRLDQFEKRFEQIERRIELSEKNMTARFEDLKQEVRTRRK
Ga0207712_108208622	3300025961	Switchgrass Rhizosphere	GKELAEMRGSLNQLDKIIGATVRQSIWQLIALIVTLVVAIGSGLAYQTRMIDKRIEQIEKRVEQSEKNMTARFEDLGKSMTTRFEDLEKNMTTRFEDLKQEVRAQRK
Ga0207674_106853293	3300026116	Corn Rhizosphere	MSTTFNPEIAALREKVEEHARELAEMRGTVNQLNKIVSASVRQSIWQLIALLVSLCVTIAGGLAYQGSMIDKRFEQIEKRFERSDNNFGDRFEQLEK
Ga0207674_115166462	3300026116	Corn Rhizosphere	MRGTVNQLNNIVSASVRQSIWQLIALLVSLCVTIAGGLAYQGTMIDKRFEQIEKRFEQLERRIEQSEKNITARFEDLKQEVRAQRK
Ga0207675_1017725411	3300026118	Switchgrass Rhizosphere	MSTAFNPEIAALREKVEEHGKELAEMRGTVNQLNKIISTSVRQSIWQLIALIVTLLVAIGGGLAYQTSMIDKRFEQFEKRFEQSDKNFGDRFEQLE
Ga0257146_10128962	3300026374	Soil	MNTTVNPEIAALRDKVEEHGRELAEMRGSVHQLDKIIGATVRQSIWQLIGLIVSLCLAIAGGLAYQTNVIDKRFEQIENRIEQSEKNMSARFEQIENRIEQSEKHMTARFEDLKQEVRAQRK
Ga0257164_10110371	3300026497	Soil	MSTTFNPEIAALRDKVEEHTKELAEMRGNLHQLDKIIGATVRQSIWQLIAVIVTLLVAIAGGLAYQTSAIDKRIEQMERSSNTRFEMIEKQIEQSGRNFGDRFEQLEKRIEQSDKNMAARFEDLKQEVRARRK
Ga0209382_111766002	3300027909	Populus Rhizosphere	MSTTFHPDVAALRKELEGYGKELAEMRGSVNQLSQIVNASVRQSVWQLIALIVSLCITIAGGLAYQASVMDKRFEQIEKRLEQSERNMTSRFEDLEKNMTSRFGDLEKNMTSRFEDLKEEVRAQRK
Ga0247682_10030992	3300028146	Soil	VLVSLCVTIAGGFAYRGSVMDKRYEQIEKRFEQSDKNFGDHFEQLERRIEQSERNITARFEDLKQEVRAQRK
Ga0268265_103534022	3300028380	Switchgrass Rhizosphere	MSTTINPELAAQRAKVEEHGKELAEMRGSLHQPEKIIASTVRQSIWQLIALIVTLLVAIGGGLAYQTSMIDKRIEQLERSSNTRFEMIEKRWQQTDKNIGERFDQIDQRIEQSEKNITARFEDLKQEVRGGRR
Ga0310888_110151421	3300031538	Soil	MRGTVNQLNKIVSASVRQSIWQLIALIVSLCVTIAGGLAYQGSMIDKRFEQIEKRIEQSEQNITARFEDLKQEVRAQRK
Ga0310890_105614691	3300032075	Soil	KVEGCVKELAEMRGTVNQLNKIVSASVRQSIWQLIALIVSLCVTIAGGLAYQGSMIDKRFEQIEKRIEQSEQNITARFEDLKQEVRAQRK
Ga0335084_115369041	3300033004	Soil	MSTTINPEITDLRQKVEAQGMELAEIRGSVHQLDKIIGATVRQSIWQLIALIVTLLVAIAGGLAYQTNMMDKRIEQLEKNSNTRFELIEKRIDQSEQNITSRFEDLERNMAARFEDLKQEVR
Ga0370498_018030_110_457	3300034155	Untreated Peat Soil	MSTTFNPEIADLRAKVEGCFKELAEMRGSVHQLDKIIGATVRQSIWQLIALIVTLLVAIAGGLAYQTSAIDKRIEQMEKSSDTRFAMIEKRIEQSEKNIIARFEDLKQEVRAQRK
Ga0370495_0324731_234_512	3300034257	Untreated Peat Soil	MGTTVNPEIAALRDKVEEHGKELAEMRGSVHQLDKIIGATVRQSIWQLIALIVTLLVAIAGGLAYQTSAIDKRIEQMEKSSDTRFAMIEQRIE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089537

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences