Metagenome / Metatranscriptome Family F089568

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089568
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	61 residues
Representative Sequence	MTEEPPLKGGEEIEPTRVPLKGPNVISTFDTPPHPDAVRAHDAAIRKHLQERRPRQDEPEE
Number of Associated Samples	93
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.98 %
% of genes near scaffold ends (potentially truncated)	13.76 %
% of genes from short scaffolds (< 2000 bps)	56.88 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.890 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (14.679 % of family members)
Environment Ontology (ENVO)	Unclassified (36.697 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.725 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.22% β-sheet: 0.00% Coil/Unstructured: 79.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF11950	DUF3467	38.53
PF08669	GCV_T_C	28.44
PF01047	MarR	3.67
PF08240	ADH_N	2.75
PF07690	MFS_1	2.75
PF01638	HxlR	1.83
PF02518	HATPase_c	1.83
PF02617	ClpS	1.83
PF04075	F420H2_quin_red	0.92
PF13439	Glyco_transf_4	0.92
PF04267	SoxD	0.92
PF13581	HATPase_c_2	0.92
PF13344	Hydrolase_6	0.92
PF01957	NfeD	0.92
PF00342	PGI	0.92
PF13657	Couple_hipA	0.92
PF03328	HpcH_HpaI	0.92
PF13463	HTH_27	0.92
PF00296	Bac_luciferase	0.92
PF09995	MPAB_Lcp_cat	0.92
PF01613	Flavin_Reduct	0.92
PF00881	Nitroreductase	0.92
PF04402	SIMPL	0.92
PF08447	PAS_3	0.92
PF01425	Amidase	0.92
PF03061	4HBT	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.83
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	1.83
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.92
COG0166	Glucose-6-phosphate isomerase	Carbohydrate transport and metabolism [G]	0.92
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.92
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.92
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.92
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.92
COG2859	Outer membrane channel-forming protein BP26/OMP28, SIMPL family	Cell wall/membrane/envelope biogenesis [M]	0.92
COG2968	Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain	Function unknown [S]	0.92
COG3471	Predicted secreted (periplasmic) protein	Function unknown [S]	0.92
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.92
COG4311	Sarcosine oxidase delta subunit	Amino acid transport and metabolism [E]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.89 %
Unclassified	root	N/A	32.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.89 %
Unclassified	root	N/A	32.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.89 %
Unclassified	root	N/A	32.11 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	64.22 %
Unclassified	root	N/A	32.11 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	64.22 %
Unclassified	root	N/A	32.11 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	40.37 %
Unclassified	root	N/A	32.11 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	30.28 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	9.17 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	9.17 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	6.42 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.67 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	9.17 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	6.42 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.67 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	9.17 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	6.42 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.67 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001397\|JGI20177J14857_1024856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300001401\|JGI20189J14885_1008404	Not Available	1727	Open in IMG/M
3300004080\|Ga0062385_10020695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2470	Open in IMG/M
3300004080\|Ga0062385_10343079	Not Available	873	Open in IMG/M
3300004082\|Ga0062384_100738404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	682	Open in IMG/M
3300004092\|Ga0062389_100392941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1502	Open in IMG/M
3300004092\|Ga0062389_101736117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	805	Open in IMG/M
3300004121\|Ga0058882_1711470	Not Available	544	Open in IMG/M
3300004635\|Ga0062388_100033479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3177	Open in IMG/M
3300005602\|Ga0070762_10000029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	40025	Open in IMG/M
3300005610\|Ga0070763_10022302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2809	Open in IMG/M
3300005712\|Ga0070764_10059691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1972	Open in IMG/M
3300005921\|Ga0070766_10906471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	604	Open in IMG/M
3300006055\|Ga0097691_1005764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	6961	Open in IMG/M
3300006642\|Ga0075521_10000960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	9103	Open in IMG/M
3300009519\|Ga0116108_1019847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2318	Open in IMG/M
3300009522\|Ga0116218_1206198	Not Available	887	Open in IMG/M
3300009523\|Ga0116221_1385088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610	Open in IMG/M
3300009672\|Ga0116215_1000274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	41647	Open in IMG/M
3300009700\|Ga0116217_10475716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	787	Open in IMG/M
3300009764\|Ga0116134_1248387	Not Available	614	Open in IMG/M
3300009824\|Ga0116219_10629216	Not Available	589	Open in IMG/M
3300010343\|Ga0074044_10583455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	730	Open in IMG/M
3300010379\|Ga0136449_101013630	Not Available	1334	Open in IMG/M
3300010379\|Ga0136449_101516242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1025	Open in IMG/M
3300010880\|Ga0126350_11646120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	716	Open in IMG/M
3300014156\|Ga0181518_10001386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24861	Open in IMG/M
3300014162\|Ga0181538_10136775	Not Available	1414	Open in IMG/M
3300014162\|Ga0181538_10137145	Not Available	1412	Open in IMG/M
3300014162\|Ga0181538_10361329	Not Available	779	Open in IMG/M
3300014495\|Ga0182015_10005278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	13492	Open in IMG/M
3300014501\|Ga0182024_10003770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35633	Open in IMG/M
3300014501\|Ga0182024_10177848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2943	Open in IMG/M
3300014502\|Ga0182021_10474092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1490	Open in IMG/M
3300014638\|Ga0181536_10026135	All Organisms → cellular organisms → Bacteria	4513	Open in IMG/M
3300016730\|Ga0181515_1109728	Not Available	519	Open in IMG/M
3300017938\|Ga0187854_10065277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1776	Open in IMG/M
3300017943\|Ga0187819_10156644	Not Available	1355	Open in IMG/M
3300017973\|Ga0187780_10004291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10705	Open in IMG/M
3300017995\|Ga0187816_10412617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300018043\|Ga0187887_10030894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3370	Open in IMG/M
3300018044\|Ga0187890_10002434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	13001	Open in IMG/M
3300018058\|Ga0187766_11151339	Not Available	559	Open in IMG/M
3300018085\|Ga0187772_10280102	Not Available	1138	Open in IMG/M
3300018085\|Ga0187772_10305919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1090	Open in IMG/M
3300018086\|Ga0187769_10096381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2120	Open in IMG/M
3300021170\|Ga0210400_11145270	Not Available	628	Open in IMG/M
3300021180\|Ga0210396_10000001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1082745	Open in IMG/M
3300021181\|Ga0210388_10001587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	17846	Open in IMG/M
3300021401\|Ga0210393_10589362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	908	Open in IMG/M
3300021402\|Ga0210385_10013708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5008	Open in IMG/M
3300021404\|Ga0210389_10001750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	17445	Open in IMG/M
3300021407\|Ga0210383_10007212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	9648	Open in IMG/M
3300021407\|Ga0210383_10051151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3443	Open in IMG/M
3300021433\|Ga0210391_10057491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3089	Open in IMG/M
3300021474\|Ga0210390_10000204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63960	Open in IMG/M
3300021474\|Ga0210390_11539425	Not Available	525	Open in IMG/M
3300021477\|Ga0210398_11168455	Not Available	609	Open in IMG/M
3300022467\|Ga0224712_10421363	Not Available	638	Open in IMG/M
3300025427\|Ga0208077_1001211	Not Available	3502	Open in IMG/M
3300025484\|Ga0208587_1025659	Not Available	1742	Open in IMG/M
3300025581\|Ga0208355_1002900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	6965	Open in IMG/M
3300025581\|Ga0208355_1045747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1097	Open in IMG/M
3300025604\|Ga0207930_1067639	Not Available	860	Open in IMG/M
3300025650\|Ga0209385_1011934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3614	Open in IMG/M
3300025664\|Ga0208849_1001167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	19511	Open in IMG/M
3300025725\|Ga0209638_1035210	All Organisms → cellular organisms → Bacteria	2192	Open in IMG/M
3300025878\|Ga0209584_10018888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2321	Open in IMG/M
3300027080\|Ga0208237_1060070	Not Available	562	Open in IMG/M
3300027297\|Ga0208241_1059374	Not Available	610	Open in IMG/M
3300027641\|Ga0208827_1173649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	586	Open in IMG/M
3300027662\|Ga0208565_1000917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	19060	Open in IMG/M
3300027696\|Ga0208696_1133674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	810	Open in IMG/M
3300027698\|Ga0209446_1142089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	620	Open in IMG/M
3300027729\|Ga0209248_10102226	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300027768\|Ga0209772_10002812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4468	Open in IMG/M
3300027855\|Ga0209693_10028476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2712	Open in IMG/M
3300027879\|Ga0209169_10234561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	961	Open in IMG/M
3300027884\|Ga0209275_10000037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	36841	Open in IMG/M
3300027895\|Ga0209624_10003616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	10867	Open in IMG/M
3300027905\|Ga0209415_10308191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1358	Open in IMG/M
3300027908\|Ga0209006_10701136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	829	Open in IMG/M
3300028556\|Ga0265337_1003640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	6616	Open in IMG/M
3300028742\|Ga0302220_10011440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4747	Open in IMG/M
3300028800\|Ga0265338_11096338	Not Available	536	Open in IMG/M
3300028877\|Ga0302235_10024335	Not Available	3228	Open in IMG/M
3300028906\|Ga0308309_11373643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	606	Open in IMG/M
3300029943\|Ga0311340_10034354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6184	Open in IMG/M
3300029943\|Ga0311340_11477546	Not Available	533	Open in IMG/M
3300029944\|Ga0311352_10663740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	827	Open in IMG/M
3300030007\|Ga0311338_10011902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	12950	Open in IMG/M
3300030490\|Ga0302184_10292228	Not Available	656	Open in IMG/M
3300030520\|Ga0311372_10144077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	4150	Open in IMG/M
3300030520\|Ga0311372_12440829	Not Available	590	Open in IMG/M
3300030520\|Ga0311372_12583075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	567	Open in IMG/M
3300030524\|Ga0311357_11395536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	597	Open in IMG/M
3300030580\|Ga0311355_11772434	Not Available	525	Open in IMG/M
3300031234\|Ga0302325_10548712	Not Available	1725	Open in IMG/M
3300031234\|Ga0302325_12387337	Not Available	636	Open in IMG/M
3300031236\|Ga0302324_101058588	Not Available	1096	Open in IMG/M
3300031525\|Ga0302326_10530221	Not Available	1775	Open in IMG/M
3300032160\|Ga0311301_10728455	Not Available	1385	Open in IMG/M
3300032160\|Ga0311301_11937119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	692	Open in IMG/M
3300032770\|Ga0335085_11198456	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300032783\|Ga0335079_10196700	Not Available	2239	Open in IMG/M
3300032805\|Ga0335078_10102044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4139	Open in IMG/M
3300032805\|Ga0335078_10125395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3668	Open in IMG/M
3300032895\|Ga0335074_10000040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	249000	Open in IMG/M
3300032896\|Ga0335075_10006807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	17645	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.17%
Host-Associated	Host-Associated	1.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.98%
Aquatic	Environmental → Aquatic	20.18%
Plants	Host-Associated → Plants	1.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.30%
Freshwater	Environmental → Aquatic → Freshwater	20.18%
Peat	Environmental → Terrestrial → Peat	14.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.18%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.68%
Loam	Environmental → Terrestrial → Soil → Loam	11.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.83%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	11.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.01%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.01%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.67%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.83%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	14.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	11.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.01%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	8.26%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.34%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.59%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.92%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.92%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.92%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001397	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012	Environmental	Open in IMG/M
3300001401	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20177J14857_10248561	3300001397	Arctic Peat Soil	MTEEQPFKGTEDMGPTRVPLKGPNVNSTFDTPPSPDAVKAHEAAMRRHLQDRRP
JGI20189J14885_10084043	3300001401	Arctic Peat Soil	MTEEQPFKDPGDMEPTTLPLDAPNVISTLDAPPHPDAVRAHDATIRKHLQDQKPPEDGAGA*
Ga0062385_100206952	3300004080	Bog Forest Soil	MTEEQPLKGGEEMEPTRVPLKGPNVISTFDTPPSADAVRAHDAAIRKHLQDRKPRQDEPQE*
Ga0062385_103430792	3300004080	Bog Forest Soil	MTEEEPFKGGEEIEPTWVPLKGPNVISTLDTPPSPDAVKAHDAAIRKHLQDRRSQQDPPQGE*
Ga0062384_1007384041	3300004082	Bog Forest Soil	MAMSEEQPSKDPRELEPTTLALDAPNVISTLDTPPHPDAVKAHDATIRKHLQDRKPPEGGTGT*
Ga0062389_1003929411	3300004092	Bog Forest Soil	MTEDEPYKRGEEMEPTKAPLEGPNVASTFDTPPSPDAVRAHDAAMRRHLQDRRPPQEPPAPS*
Ga0062389_1017361172	3300004092	Bog Forest Soil	MSEEQPFKDPGELEATTLPLNAPNVISTLDTPPHPDAVKAHDATIRKHLQDRKPPEDGAGA*
Ga0058882_17114701	3300004121	Forest Soil	MTEEEPFKGSEDIEPTRAPVKGPNVTSTLDTPPSADAVKVHDAAIRKHLQDRRSQQDRPQDE*
Ga0062388_1000334795	3300004635	Bog Forest Soil	MTEEEPFKGADEIEPTRVPLKGPNVISTLDAPPHPDAVRAQEAAIRRHLKGQRSEQDPPGP*
Ga0070762_1000002929	3300005602	Soil	VSRPRVGTMTEEAPRNGSEELEPTKLPLRGPNVVSTFDTPPSPDAVKVHDAAIRKHLQDRKPREDAPGEDAPGE*
Ga0070763_100223025	3300005610	Soil	MTEERPYKDGDEIEPTMVPLKGPNVISTLDTPPRPDAIKAQDAAIRKHLQGRKPRHDQPEE*
Ga0070764_100596915	3300005712	Soil	MTEEDPYKAGEEMEPTRVPLTGPNVTSTFDSPPSPDAVRAQEASIRRHLQGRRPPPERSDAS*
Ga0070766_109064712	3300005921	Soil	MTEEEPRRGPDEMEPTKLPLRGPNVVSTFDVPPSADAVKVHDAAIRKHLQDRKPREDPPRE*
Ga0097691_10057643	3300006055	Arctic Peat Soil	MTEEQPFKGTEDMGPTRVPLKGPNVNSTFDTPPSPDAVKAHEAAMRRHLQDRRPPQDPQDAA*
Ga0075521_100009609	3300006642	Arctic Peat Soil	MTEEQPFKGTEDMGPTRVPLKGPNVNSTFDTPPSPDAVKAHEAAMRRHLQDRRPPQDPHDAA*
Ga0116108_10198472	3300009519	Peatland	MNEEQPFKDDEDLEPTFVPLRGPNVISTFDTPPHPDAVKAQDAAIRKHLQDRKPRPDPPRE*
Ga0116218_12061983	3300009522	Peatlands Soil	MTEDEPFKGGEEMEPTEAPLTGPNVNSTLNTPPHPDAVRAQDAAIRRHLHDRRRRLEPPQEG*
Ga0116221_13850882	3300009523	Peatlands Soil	MTEDEPYKGSEDMEPTKVPLTGPNVTSTFDTPPSPDAVKAQDASIRKHLQGRRPPQDPPDTA*
Ga0116215_100027441	3300009672	Peatlands Soil	MTEDEPYKGAEEIEPTRVPLKGPGVISTFDTPPSADAVRAQDASIRKHLQARRSPPDTSETG*
Ga0116217_104757162	3300009700	Peatlands Soil	MTEDEPYKGSEDMEPTKVPLTGPNVTSTFDTPPSPDAVKAQDASIRKHLQGRRPPQDPPDVG*
Ga0116134_12483871	3300009764	Peatland	MNEEQPFKDDEDLEPTFVPLRGPNVISTFDTPPHPDAVKAQDAAIRKHLQDRKPRQDPPRE*
Ga0116219_106292161	3300009824	Peatlands Soil	MTEDEPFKGGEEMEPTEAPLTGPNVNSTLNTPPHPDAVRAQNAAIRRHLHDRRRRLEPPQEG*
Ga0074044_105834552	3300010343	Bog Forest Soil	MTEEPPLKGGEEIEPTRVPLKGPNVISTFDTPPHPDAVRAHDAAIRKHLQERKPRQDEPEE*
Ga0136449_1010136302	3300010379	Peatlands Soil	MTEEEPFKGAEEMEPTKLPLKGPNVISTFDAPPSPDAVRAQHAAMRRHLKDRRSEQDPPRP*
Ga0136449_1015162422	3300010379	Peatlands Soil	MTEDEPFKSAEDMEPTKVPLKGPNVLNTLDTPPHPDAVRVHDAAIRKHLRDRKPRQDQPED*
Ga0126350_116461201	3300010880	Boreal Forest Soil	MTEERPFRDSGDVEPTTLPLNAPNVISTLDTPPHPDAVRAHDATIRKHLQDRKAPEDDAGA*
Ga0181518_1000138616	3300014156	Bog	MTEEPPLKGGEEIEPTRVPLKGPNVISTFDTPPHPDAVRAHDAAIRKHLQERRSREEEPGE*
Ga0181538_101367752	3300014162	Bog	GEEIEPTRVPLKGPNVISTFDTPPHPDAVRAHDAAIRKHLQERKPRQDEPEE*
Ga0181538_101371452	3300014162	Bog	GEEIEPTRVPLKGPNVISTFDTPPHPDAVRAHDAAIRKHLRERRPREDEPEE*
Ga0181538_103613291	3300014162	Bog	MTEEPPLKGGEEIEPTRVPLKGPNVISTFDTPPHPDAVRAHDAAIRKHL
Ga0182015_100052788	3300014495	Palsa	MSEEREAQPFKAREQIAPTPLQLRGPNVISTFDTPLHPDAVRAQDASIRKYLQDHKPRPGGL*
Ga0182024_1000377022	3300014501	Permafrost	MSEEREERPCKGGEEIEPRMFPLKGPNVISTFDSPPHPDAVRAQDAAIRKHLQDRKPRPQPPRD*
Ga0182024_101778481	3300014501	Permafrost	MTEEQPFKDADEMEPTKLPLKAPNVISTLDTPPHPDAVRAHDASIRKHLQDQKPREDRPDA*
Ga0182021_104740922	3300014502	Fen	MSEYEPFKGREQKLEPTEMPLKAPNVISTLDTPPHPDAVRAQDAAIRRHLEDRQSPQDPPDAG*
Ga0181536_100261355	3300014638	Bog	MTEEPPLKGGEEIEPTRVPLKGPNVISTFDTPPHPDAVRAHDAAIRKHLQERRPRQDEPEE*
Ga0181515_11097282	3300016730	Peatland	MTEEPPLKGGEEIEPTRVPLKGPNVISTFDTPPHPDAVRAHDAAIRKHLQERKPRQDEPE
Ga0187854_100652772	3300017938	Peatland	MNEEQPFKDDEDLEPTFVPLRGPNVISTFDTPPHPDAVKAQDAAIRKHLQDRKPRPDPPR
Ga0187819_101566443	3300017943	Freshwater Sediment	MSEDEPLKGAEDMEPTRVPLKGPNVISTLDTPPHPDAVKAHDAAIRKHLQDHRSQQDRRQDD
Ga0187780_100042916	3300017973	Tropical Peatland	MSEDEPLKGGEEMEPTRVPLKGPNVISTLDTPPHPDAVKAHDAAIRKHLRGRRSQQDRPQDD
Ga0187816_104126172	3300017995	Freshwater Sediment	MTEDEPLRGAEEMAPTRVPLKGPNVISTFDSPPHPDAVRAQDAAIRKHLRDRKPRQGEPE
Ga0187887_100308944	3300018043	Peatland	MSEEREEQPFKGGEEFAPTPLSLRGPNVISTFDSPPHPDAVRAQDASIRKYLQDRKPRPGWL
Ga0187890_100024349	3300018044	Peatland	MSEEREERPFKGGEEFEPTMLPLKGPNVISTFDTPPHPDAVKAQDAAIRKHLQDRKPRQDPPRE
Ga0187766_111513391	3300018058	Tropical Peatland	MTEDEPYKGAEDMEPTRVPLKGPNVTTTLDSPPSPDAVKAQDAVIRKHLLDRRSQQDEQR
Ga0187772_102801022	3300018085	Tropical Peatland	MSEDEPFSGTDDIEPTRLPLRGPNVTCTLDTPPRPDAVKAHEASIRKHLQDRRSSQDAPPSEP
Ga0187772_103059192	3300018085	Tropical Peatland	MREDEPYKGGEDMEPTRVPLKGPNVITTLDTPPSPDAVRVQDAAIRKHLQVRRSRQDPPPQN
Ga0187769_100963815	3300018086	Tropical Peatland	MSEDEPFKGADEMEPTRVPLRGPNVISTLDTPPRPDAVRVQDAVIRKHLQDRRDQQERSG
Ga0210400_111452701	3300021170	Soil	MTEEEPRKGGEDLEPTRVPLKGPNVISTLDTPPHPDAVKAQDASIRKHLQDRKQRRDEPQ
Ga0210396_10000001476	3300021180	Soil	MSEEQPFKGGERDEPTMVPPKGPNVISTLDTPPRPDAVKAHDAAIRKHLQDRRAQQDPPA
Ga0210388_100015874	3300021181	Soil	MSEEQPFKDPGELEPTTLPLDAPNVISTLDTPPHPDAVKAHDATIRKHLQDRKPPEGDAG
Ga0210393_105893622	3300021401	Soil	MAEEQPLKGPEDMEPTKLPLSGPNVVSTFDMPPSADAVKAHDAAIRRHLQERKPRQDPPS
Ga0210385_100137084	3300021402	Soil	MTEEAPRKGPEEMEPTKLPLRGPNVVSTFDVPPSADAVKAHDAVIRKHLQDRKPREDPSS
Ga0210389_1000175013	3300021404	Soil	MTESDPFDGVGDMEPTRVPLTGPNVISTFDSPPHPDAVKAHDAAIRKHLQDRRAQQDREQPPQED
Ga0210383_1000721213	3300021407	Soil	MTEEEPRRGPEELEPTKLPLRGPNVVSTFDTPPSPDAVKVHDAAIRKHLQDRKPREGPPS
Ga0210383_100511515	3300021407	Soil	MSEEQPSKEPGELEPTTLALNGPNVISTLDTPPHPDAVKAHDATIRKHLQDRKPPEGGAG
Ga0210391_100574912	3300021433	Soil	MNEEQPRKGDEDIEPTRVPLKGPNVISTFDTPPHPDAVRAQDAAIRKHLRDRKPRDDR
Ga0210390_1000020415	3300021474	Soil	MTEEQPYRDGDEIEPTKVPLKGPNVISTFDTPPRPGAIKAQDAAIRKHLQDRKPRQDQPE
Ga0210390_115394252	3300021474	Soil	MTEEEPFKDAEDIGPTKVPLKGPNVSSTFDTPPHPDAVKAQDAAIRKHLQARRPQPGQADGA
Ga0210398_111684552	3300021477	Soil	MSEEREEQPFKGGEEFAPTPLSLRGPNVISTFDTPPHPDAVRAQDAAIRKHLQDRKPRPGGL
Ga0224712_104213632	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MHEEEPLKGGEDIEPTRVPLTGPNVRSTFDVPPRPDALRAHWRTIRRHLRDAPPRPDPPEAA
Ga0208077_10012113	3300025427	Arctic Peat Soil	MGEYEPFKGRDRKLEPTEVPLKGPNVISTLDTPPHPDAVKAQDAAIRRHLKSRRAPQDPPDAE
Ga0208587_10256591	3300025484	Arctic Peat Soil	KGAQDMGPTRVPLKGPNVSSTFDTPPSPDAVKAHEAAMRRHLQDRRPPQDPQDAA
Ga0208355_10029009	3300025581	Arctic Peat Soil	MTEEQPFKGTEDMGPTRVPLKGPNVNSTFDTPPSPDAVKAHEAAMRRHLQDRRPPQDPQDAA
Ga0208355_10457472	3300025581	Arctic Peat Soil	MAEYEPIEGGEGKLEPTEAPLRAPNVISTLDSQPSPDAVKAHEAAIRRHLKDHRATQDPPHAA
Ga0207930_10676393	3300025604	Arctic Peat Soil	MTEEQPFKGAQDMGPTRVPLKGPNVSSTFDTPPSPDAVKAHEAAMRRHLQDRRPPQDPHDAA
Ga0209385_10119342	3300025650	Arctic Peat Soil	MTEEQPFKGTEDMGPTRVPLKGPNVNSTFDTPPSPDAVKAHEAAMRRHLQDRRPPQDPHDAA
Ga0208849_100116710	3300025664	Arctic Peat Soil	MTEEQPFKDPGDMEPTTLPLDAPNVISTLDAPPHPDAVRAHDATIRKHLQDQKPPEDGAG
Ga0209638_10352103	3300025725	Arctic Peat Soil	MTEEQPFKGAQDMGPTRVPLKGPNVNSTFDTPPSPDAVKAHEAAMRRHLQDRRPPQDPHDAA
Ga0209584_100188881	3300025878	Arctic Peat Soil	AFRPNVKQMTEEQPFKGTEDMGPTRVPLKGPNVNSTFDTPPSPDAVKAHEAAMRRHLQDRRPPQDPHDAA
Ga0208237_10600701	3300027080	Forest Soil	MNEEQPRSGDEDVEPMLAPLKGPNVISTFDTPPHPDAVRAQDAAIRKHLRDRRPRDDRLDGE
Ga0208241_10593742	3300027297	Forest Soil	MTEEAPRKGPEEMEPTKLPLRGPNVVSTFDVPPSADAVKAHEAAIRKHLQDRRPPHDPPK
Ga0208827_11736492	3300027641	Peatlands Soil	MTEDEPYKGSEDMEPTKVPLTGPNVTSTFDTPPSPDAVKAQDASIRKHLQGRRPPQDPPDTA
Ga0208565_10009179	3300027662	Peatlands Soil	MTEDEPYKGAEEIEPTRVPLKGPGVISTFDTPPSADAVRAQDASIRKHLQARRSPPDTSETG
Ga0208696_11336741	3300027696	Peatlands Soil	MTEDEPFKGGEEMEPTEAPLTGPNVNSTLNTPPHPDAVRAQDAAIRRHLHDRRRRLEPPQEG
Ga0209446_11420892	3300027698	Bog Forest Soil	MSEDEPYKGGDDIEPTRAPLKGPNVTSTLDTPPHPDAVRAQKAAIRKHLRGRRPGGDAPQPKAPPAS
Ga0209248_101022263	3300027729	Bog Forest Soil	MTEEEPFKGGEEIEPTWVPLKGPNVISTLDTPPSPDAVKAHDAAIRKHLQDRRSQQDPPQGE
Ga0209772_100028126	3300027768	Bog Forest Soil	MTEEEPFKGADEIEPTRVPLKGPNVISTLDAPPHPDAVRAQEAAIRRHLKGQRSEQDPPG
Ga0209693_100284763	3300027855	Soil	MTEERPYKDGDEIEPTMVPLKGPNVISTLDTPPRPDAIKAQDAAIRKHLQGRKPRHDQPE
Ga0209169_102345612	3300027879	Soil	MTEEDPYKAGEEMEPTRVPLTGPNVTSTFDSPPSPDAVRAQEASIRRHLQGRRPPPERSDAS
Ga0209275_1000003711	3300027884	Soil	MTEEAPRNGSEELEPTKLPLRGPNVVSTFDTPPSPDAVKVHDAAIRKHLQDRKPREDAPGEDAPGE
Ga0209624_1000361612	3300027895	Forest Soil	MTEEEPRRGPEEMEPTKLPLRGPNVVSTFDTPPSPDAVKVHDAAIRKHLQDRKPRQDPPD
Ga0209415_103081912	3300027905	Peatlands Soil	MNEEQPFRDAEDMEPTKAPLKGPNVINTLDTPPHPDAVKVHDAAIRKHLADRKSQQDRPQ
Ga0209006_107011362	3300027908	Forest Soil	MSEEEPFKGGEEMEPTRVPLTGPGLTSTFDTPPHPDAVKAQEASIRKHLQDRRPRRGDPDEA
Ga0265337_10036404	3300028556	Rhizosphere	MGEYEPFKGRDRKLEPTEVPLKGPNVTSTLDTPPHPDAVRAQDAAIRRHLKDRRAPQDSPEAE
Ga0302220_100114405	3300028742	Palsa	MTEEEPRRGGEELEPTRVPLKGPNVISTLDTPPHPDAVRAHFAAIRKHLRDRRRRREERE
Ga0265338_110963381	3300028800	Rhizosphere	MGEYEPFKGREQELEPTEVPLKGPNVISTLDSPPHPDAVKAQDAAIRRHLKDRRMPPHRSDAD
Ga0302235_100243352	3300028877	Palsa	MTEEEPFKGGEEIEPTWVPLKGPNVISTLDTPPSPDAVKVHDAAMRKHLQDRRSQQDPPQGE
Ga0308309_113736432	3300028906	Soil	RPREMAMSEEQPFKDPGDLEATTLPLNAPNVISTLDTPPHPDAVKAHDATIRKHLQDRKPPEGGAGA
Ga0311340_100343542	3300029943	Palsa	MTEEEPLRGGEEMEPTKVPLKGKNVISTFDLPPHPDAVKAQDAAIRKHLQDRRPPLDPPK
Ga0311340_114775462	3300029943	Palsa	MHEEEPLKGRDEMGPTKLPLKGPNVISTLDTPPSADAIRAHDAAIRKHLQDRRPPQDPPGSA
Ga0311352_106637402	3300029944	Palsa	EEEPLRGSEDMEPTKVPLTGPNVISTFDLPPHPDAVKAQDAAIRKHLQDRRPPPQDPSDA
Ga0311338_1001190214	3300030007	Palsa	MAEEEPLRGSEDMEPTKVPLTGPNVISTFDLPPHPDAVKAQDAAIRKHLQDRRPPPQDPSDAA
Ga0302184_102922281	3300030490	Palsa	MTEDEPFKGAEDMEPTKAPLEGPNVASTFDTPPSADAVRAQDAAIRKHLQDRKPPPDPPD
Ga0311372_101440776	3300030520	Palsa	MTEEDPFKDPDDLELTKHPLRGPNVASTFDTPPSQDALKAHDAAIRKYLQERGRPPQGSSGTA
Ga0311372_124408292	3300030520	Palsa	MTEADPFKGGEEIEPTKVPLTGPNVVSTFDAPPHPDAVKVHDAAIRRHLRDRRPPPDPAAER
Ga0311372_125830751	3300030520	Palsa	GEDMEPTRVPLTGPNVTSTFDTPPSPDAVRAQEASIRRHLQDRRPPPQRSDID
Ga0311357_113955361	3300030524	Palsa	AMAEEEPLRGSEDMEPTKVPLTGPNVISTFDLPPHPDAVKAQDAAIRKHLQDRRPPPQDPSDAA
Ga0311355_117724341	3300030580	Palsa	PLRGGEEMEPTKVPLKGKNVISTFDLPPHPDAVKAQDAAIRKHLQDRRPPLDPPKQ
Ga0302325_105487123	3300031234	Palsa	MTEADPIKGGEEIEPTKVPLTGPNVVSTFDAPPHPDAVKVHDAAIRRHLRDRRPPPDPAAER
Ga0302325_123873371	3300031234	Palsa	MTEDEQFKAGEDMEPTRVPLTGPNVNSTFDTPPSPDAVKAQDASIRKHLQDLRPPQERPGSN
Ga0302324_1010585881	3300031236	Palsa	TEEDPFKDPDDLELTKHPLRGPNVASTFDTPPSQDALKAHDAAIRKYLQERGRPPQGSSGTA
Ga0302326_105302213	3300031525	Palsa	MTEEDPFKDPDDLELTKHPLKGPNVASTFDTPPSQDALKAHDAAIRKYLQERGRPPQGSSGTA
Ga0311301_107284552	3300032160	Peatlands Soil	MTEDEPFKSAEDMEPTKVPLKGPNVLNTLDTPPHPDAVRVHDAAIRKHLRDRKPRQDQPE
Ga0311301_119371192	3300032160	Peatlands Soil	MTEEEPFKGAEEMEPTKLPLKGPNVISTFDAPPSPDAVRAQHAAMRRHLKDRRSEQDPPR
Ga0335085_111984562	3300032770	Soil	MTEEEPFKAAEEMEPTKAPLKGPNVTSTFDTPPRPDAVRAQDAAIRRHLQARRPPEEPAG
Ga0335079_101967002	3300032783	Soil	MTEEDPFKGGEEIEPTRVPLKGPNVTTTLDTPPSPDAVKAHDAAIRKHLRDRRAQQDPPPQG
Ga0335078_101020444	3300032805	Soil	MTEEDPFKGGEEIEPTRVPLKGPNVTTTLDTPPSPDAVKAQDAAIRKHLRDRRAQQDPPPRG
Ga0335078_101253953	3300032805	Soil	MTEDEPFKGAEDMEPTRVQLKGPNVTSTFDTPPRPDAVKAQDAAMRKHLKGQRPPQDPSEPA
Ga0335074_1000004050	3300032895	Soil	MSAMREDEPFKGREDMEPTRAPLKAPNVISTLDTPPSPDAVKAQDAVIRKHLQGRRSQQDPPAQG
Ga0335075_100068072	3300032896	Soil	MTEDEPFKGGEEIEPTRVPLKGPNVTSTFDTPPRPEAVEAQDAAMRKHLQSRRPPQDPSETP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089568

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences