Metagenome Family F089604

Basic Information
Family ID	F089604
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	40 residues
Representative Sequence	MNFIPDNILSNFIARSKNYENCSSCRMNFVRNGIVDGLME
Number of Associated Samples	22
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	96.30 %
% of genes from short scaffolds (< 2000 bps)	83.33 %
Associated GOLD sequencing projects	22
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Unclassified (82.407 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza (78.704 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (91.667 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.12% β-sheet: 0.00% Coil/Unstructured: 55.88%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF01535	PPR	0.93
PF04525	LOR	0.93
PF03140	DUF247	0.93
PF00191	Annexin	0.93
PF02992	Transposase_21	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG4894	Putative phospholipid scramblase YxjI, Tubby2 superfamily	Lipid transport and metabolism [I]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
All Organisms	root	All Organisms	17.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
cellular organisms	root	All Organisms → cellular organisms	17.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	14.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	14.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	14.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	14.81 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	14.81 %
Lactobacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	12.04 %
Lactobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	12.04 %
Weissella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	12.04 %
Weissella confusa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	12.04 %
Weissella confusa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	11.11 %
Weissella confusa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	11.11 %
Weissella confusa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	11.11 %
Weissella confusa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	11.11 %
Weissella confusa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	11.11 %
Weissella confusa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	9.26 %
Weissella confusa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa	2.78 %
malvids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Malpighiales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales	9.26 %
Weissella confusa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa	2.78 %
Malvales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Salicaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae	8.33 %
Weissella confusa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa	2.78 %
Malvaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae	1.85 %
Rhizophoraceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Rhizophoraceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Saliceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae	8.33 %
Weissella confusa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa	2.78 %
Malvoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae → Malvoideae	0.93 %
Rhizophora	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Rhizophoraceae → Rhizophora	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Populus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus	6.48 %
Weissella confusa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa	2.78 %
Hibiscus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae → Malvoideae → Hibiscus	0.93 %
Rhizophora mucronata	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Rhizophoraceae → Rhizophora → Rhizophora mucronata	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Populus trichocarpa	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa	5.56 %
Weissella confusa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa	2.78 %
Populus tomentosa	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus tomentosa	0.93 %
Hibiscus syriacus	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae → Malvoideae → Hibiscus → Hibiscus syriacus	0.93 %
Rhizophora mucronata	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Rhizophoraceae → Rhizophora → Rhizophora mucronata	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300028786\|Ga0307517_10093950	Not Available	2426	Open in IMG/M
3300028786\|Ga0307517_10194900	Not Available	1278	Open in IMG/M
3300028786\|Ga0307517_10339853	Not Available	820	Open in IMG/M
3300028786\|Ga0307517_10436526	Not Available	682	Open in IMG/M
3300028786\|Ga0307517_10614266	Not Available	533	Open in IMG/M
3300028786\|Ga0307517_10660283	Not Available	507	Open in IMG/M
3300028794\|Ga0307515_10324665	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1202	Open in IMG/M
3300028794\|Ga0307515_10422859	Not Available	952	Open in IMG/M
3300028794\|Ga0307515_10482622	Not Available	851	Open in IMG/M
3300030521\|Ga0307511_10006066	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa	12198	Open in IMG/M
3300030521\|Ga0307511_10059165	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae → Malvoideae → Hibiscus → Hibiscus syriacus	2950	Open in IMG/M
3300030521\|Ga0307511_10243908	Not Available	872	Open in IMG/M
3300030521\|Ga0307511_10267200	Not Available	804	Open in IMG/M
3300030522\|Ga0307512_10019586	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa	6152	Open in IMG/M
3300030522\|Ga0307512_10108229	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa	1845	Open in IMG/M
3300030522\|Ga0307512_10213769	Not Available	1020	Open in IMG/M
3300030522\|Ga0307512_10375342	Not Available	611	Open in IMG/M
3300030522\|Ga0307512_10440985	Not Available	529	Open in IMG/M
3300031456\|Ga0307513_10000188	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	89892	Open in IMG/M
3300031456\|Ga0307513_10271314	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa	1479	Open in IMG/M
3300031456\|Ga0307513_10350428	Not Available	1224	Open in IMG/M
3300031456\|Ga0307513_10408084	Not Available	1091	Open in IMG/M
3300031456\|Ga0307513_10576801	Not Available	835	Open in IMG/M
3300031456\|Ga0307513_10600825	Not Available	809	Open in IMG/M
3300031456\|Ga0307513_10645687	Not Available	765	Open in IMG/M
3300031456\|Ga0307513_10709549	Not Available	711	Open in IMG/M
3300031507\|Ga0307509_10205381	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa	1801	Open in IMG/M
3300031507\|Ga0307509_10309552	Not Available	1322	Open in IMG/M
3300031507\|Ga0307509_10540289	Not Available	844	Open in IMG/M
3300031507\|Ga0307509_10943942	Not Available	528	Open in IMG/M
3300031507\|Ga0307509_11006704	Not Available	500	Open in IMG/M
3300031616\|Ga0307508_10200677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa	1595	Open in IMG/M
3300031616\|Ga0307508_10445929	Not Available	886	Open in IMG/M
3300031616\|Ga0307508_10496784	Not Available	814	Open in IMG/M
3300031616\|Ga0307508_10767506	Not Available	578	Open in IMG/M
3300031616\|Ga0307508_10840832	Not Available	538	Open in IMG/M
3300031616\|Ga0307508_10897416	Not Available	512	Open in IMG/M
3300031649\|Ga0307514_10023603	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	4988	Open in IMG/M
3300031649\|Ga0307514_10157753	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae	1509	Open in IMG/M
3300031649\|Ga0307514_10167492	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae	1442	Open in IMG/M
3300031649\|Ga0307514_10189383	Not Available	1312	Open in IMG/M
3300031649\|Ga0307514_10235390	Not Available	1104	Open in IMG/M
3300031649\|Ga0307514_10283230	Not Available	946	Open in IMG/M
3300031649\|Ga0307514_10300419	Not Available	900	Open in IMG/M
3300031649\|Ga0307514_10409653	Not Available	687	Open in IMG/M
3300031649\|Ga0307514_10492951	Not Available	585	Open in IMG/M
3300031649\|Ga0307514_10574817	Not Available	513	Open in IMG/M
3300031730\|Ga0307516_10158806	Not Available	2013	Open in IMG/M
3300031730\|Ga0307516_10245476	Not Available	1487	Open in IMG/M
3300031730\|Ga0307516_10278181	Not Available	1356	Open in IMG/M
3300031730\|Ga0307516_10383067	Not Available	1067	Open in IMG/M
3300031730\|Ga0307516_10394752	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus tomentosa	1043	Open in IMG/M
3300031730\|Ga0307516_10518956	Not Available	845	Open in IMG/M
3300031730\|Ga0307516_10729182	Not Available	649	Open in IMG/M
3300031730\|Ga0307516_10985079	Not Available	514	Open in IMG/M
3300031730\|Ga0307516_11008710	Not Available	505	Open in IMG/M
3300031838\|Ga0307518_10122787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa	1835	Open in IMG/M
3300031838\|Ga0307518_10136680	Not Available	1715	Open in IMG/M
3300031838\|Ga0307518_10185658	Not Available	1399	Open in IMG/M
3300031838\|Ga0307518_10185885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa	1398	Open in IMG/M
3300031838\|Ga0307518_10214066	Not Available	1265	Open in IMG/M
3300031838\|Ga0307518_10275373	Not Available	1046	Open in IMG/M
3300031838\|Ga0307518_10360435	Not Available	839	Open in IMG/M
3300031838\|Ga0307518_10372270	Not Available	816	Open in IMG/M
3300031838\|Ga0307518_10417187	Not Available	738	Open in IMG/M
3300031838\|Ga0307518_10500918	Not Available	625	Open in IMG/M
3300031838\|Ga0307518_10570734	Not Available	552	Open in IMG/M
3300031838\|Ga0307518_10591730	Not Available	533	Open in IMG/M
3300031838\|Ga0307518_10592738	Not Available	532	Open in IMG/M
3300032354\|Ga0325403_1019843	Not Available	6105	Open in IMG/M
3300032354\|Ga0325403_1052173	Not Available	2798	Open in IMG/M
3300032354\|Ga0325403_1052661	Not Available	2773	Open in IMG/M
3300032354\|Ga0325403_1056249	Not Available	2585	Open in IMG/M
3300032354\|Ga0325403_1092002	Not Available	1354	Open in IMG/M
3300032354\|Ga0325403_1092376	Not Available	1346	Open in IMG/M
3300032354\|Ga0325403_1122786	Not Available	862	Open in IMG/M
3300032354\|Ga0325403_1123483	Not Available	855	Open in IMG/M
3300032355\|Ga0325401_1012454	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa	8178	Open in IMG/M
3300032355\|Ga0325401_1089913	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae	1782	Open in IMG/M
3300032355\|Ga0325401_1111187	Not Available	1376	Open in IMG/M
3300032355\|Ga0325401_1142773	Not Available	997	Open in IMG/M
3300032355\|Ga0325401_1242389	Not Available	525	Open in IMG/M
3300032374\|Ga0325400_1147142	Not Available	1258	Open in IMG/M
3300032389\|Ga0325405_1055645	Not Available	2214	Open in IMG/M
3300032390\|Ga0325404_1028701	Not Available	4446	Open in IMG/M
3300032390\|Ga0325404_1100128	Not Available	791	Open in IMG/M
3300032740\|Ga0325411_1098235	Not Available	731	Open in IMG/M
3300033179\|Ga0307507_10114959	Not Available	2180	Open in IMG/M
3300033179\|Ga0307507_10427177	Not Available	741	Open in IMG/M
3300033179\|Ga0307507_10427895	Not Available	740	Open in IMG/M
3300033179\|Ga0307507_10537864	Not Available	619	Open in IMG/M
3300033179\|Ga0307507_10580750	Not Available	583	Open in IMG/M
3300033179\|Ga0307507_10584311	Not Available	580	Open in IMG/M
3300033179\|Ga0307507_10696052	Not Available	508	Open in IMG/M
3300033179\|Ga0307507_10696357	Not Available	508	Open in IMG/M
3300033179\|Ga0307507_10701587	Not Available	505	Open in IMG/M
3300033180\|Ga0307510_10081578	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Rhizophoraceae → Rhizophora → Rhizophora mucronata	3134	Open in IMG/M
3300033180\|Ga0307510_10124187	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	2276	Open in IMG/M
3300033180\|Ga0307510_10167907	Not Available	1778	Open in IMG/M
3300033180\|Ga0307510_10221484	Not Available	1403	Open in IMG/M
3300033180\|Ga0307510_10571011	Not Available	579	Open in IMG/M
3300033180\|Ga0307510_10573064	Not Available	577	Open in IMG/M
3300033180\|Ga0307510_10617689	Not Available	538	Open in IMG/M
3300034389\|Ga0325419_057471	Not Available	2005	Open in IMG/M
3300034389\|Ga0325419_112929	Not Available	696	Open in IMG/M
3300034689\|Ga0325421_140161	Not Available	562	Open in IMG/M
3300034778\|Ga0325423_111133	Not Available	727	Open in IMG/M
3300034899\|Ga0325407_065691	Not Available	1773	Open in IMG/M

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

Habitat	Taxonomy	Distribution
Roots	Host-Associated → Plants → Roots	78.70%
Wood	Host-Associated → Plants → Wood	17.59%
Phylloplane	Host-Associated → Plants → Phylloplane	3.70%

Habitat	Taxonomy	Distribution
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	78.70%
Xylem	Host-Associated → Plants → Wood → Unclassified → Unclassified → Xylem	17.59%
Leaf	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Leaf	3.70%

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0307517_100939501	3300028786	Ectomycorrhiza	SDNILSNFITRSKSYENCSSYQMNFGRNGIINSLIE
Ga0307517_101949001	3300028786	Ectomycorrhiza	FIPDNILSNFITRSNNYENCIFYRMNFVSNGIINSLME
Ga0307517_103398531	3300028786	Ectomycorrhiza	NLNFIPDNILPNFIARSKNHVNCSSCRMNFVRNEIVDSLMEQ
Ga0307517_104365261	3300028786	Ectomycorrhiza	CNLNFIPNNILPNFIARSKNHGNYSFYQMNFICNRILDSLMEQ
Ga0307517_106142661	3300028786	Ectomycorrhiza	HCNINFIPDNILSNFITRSKNYENCSSYQMNFVCNGIIDGLME
Ga0307517_106602831	3300028786	Ectomycorrhiza	DNILTNFIACSKNHENCSFCRMNFVRNEIVKYFKKN
Ga0307515_103246651	3300028794	Ectomycorrhiza	IPDNILPNFIARSKNHGNCSSCRMNFVRNGIVDSLME
Ga0307515_104228591	3300028794	Ectomycorrhiza	SYCNLNFIPDNILLNFIARRINHDNCSYCRMNFVHNEIVDFFLKKLCFTRKTST
Ga0307515_104826221	3300028794	Ectomycorrhiza	NFIPDNILPNFIARSKNHENCSSCRINFGRNEIIIFF
Ga0307511_100060668	3300030521	Ectomycorrhiza	LNFINDNILPNFIARSKNHENCSFYGMNFVRNEIVNFFFKLCFTRKTSI
Ga0307511_100591651	3300030521	Ectomycorrhiza	NFIPDNILPNFIARSKNHENCSSCRMNFVRNEIVIFFLKN
Ga0307511_102439081	3300030521	Ectomycorrhiza	DILPDFIARSKNHRNCSPYRMNFVCYGIVDRLIER
Ga0307511_102672001	3300030521	Ectomycorrhiza	LNFIPDNILLNFIARSKNHGNCSFCRMNFVCNRIVDSLMEQ
Ga0307512_100195865	3300030522	Ectomycorrhiza	DNILSDFITRSQNYENYSSYRLNFVYNGIINSLME
Ga0307512_101082291	3300030522	Ectomycorrhiza	NILPNFIARSKNHENCSSCRMNFVRNGIVDSLMEQ
Ga0307512_102137692	3300030522	Ectomycorrhiza	SDNILPNFIARSKNHGSCSSCRMYFIRNEIVDSLMEQ
Ga0307512_103753421	3300030522	Ectomycorrhiza	LDNILPNFIARSKNHGNCSSCRMYFIRNGIVDSLIE
Ga0307512_104409851	3300030522	Ectomycorrhiza	NFIPNNILPNFIARSKNHGNCSSCRMNFVCNGIVDSLMEQ
Ga0307513_100001881	3300031456	Ectomycorrhiza	YQINFIPDNILSNFITRSKNNRNYNSCRMNFVRNGIVDGLMA
Ga0307513_102713142	3300031456	Ectomycorrhiza	HYNINFIPGNILSNFITRSKYYENCSSYRINFVRNGIINSLME
Ga0307513_103504281	3300031456	Ectomycorrhiza	PDNILSNFIARSKNYRNCSSCRMNFERNEIVDGLMT
Ga0307513_104080841	3300031456	Ectomycorrhiza	NLNFIPDNILTNFIACSKNHENCSFYRMNFVCNKIVKYF
Ga0307513_105768011	3300031456	Ectomycorrhiza	IHSHYNINFIPGNILSNFITRSKYYENCSSYRINFVRNGIINILME
Ga0307513_106008251	3300031456	Ectomycorrhiza	FIPDYILSNFITRSKNYENCSSYRMNFVRNGIINSLME
Ga0307513_106456871	3300031456	Ectomycorrhiza	NFILDNILPNFIARSKNGNCSSCRMNFVRNEIVNFFFKKLSFTRKTSI
Ga0307513_107095491	3300031456	Ectomycorrhiza	NFIPDNILSNFITRSKNYENCSSYRMNFVRNGIINSLME
Ga0307509_102053811	3300031507	Ectomycorrhiza	NILSNFIARSKNHRNCSSCWMNFVCNKIVDSLMKQ
Ga0307509_103095521	3300031507	Ectomycorrhiza	HCNINFIPDNILSNFITRSQNYENCSSYRLNFVRNGIINSLME
Ga0307509_105402891	3300031507	Ectomycorrhiza	YSYCNLNFIPDNILPNFIARSKNHENCSSCRMNFVRNEIVNFFLKN
Ga0307509_109439421	3300031507	Ectomycorrhiza	HTNINFISDNILSNFITCSKKSYENSSSYRMNFGRNGIINSLME
Ga0307509_110067041	3300031507	Ectomycorrhiza	NLNFIPDNILPNFIARSKNHENCSSCRMNFVRNKIVNFF
Ga0307508_102006772	3300031616	Ectomycorrhiza	IPDNILSNFIARSKNHENCSSCRMNFVRNEIVKFF
Ga0307508_104459291	3300031616	Ectomycorrhiza	INFIPDNILSNFITRSNNYENCSFYRMNFVRNEIINSLME
Ga0307508_104967841	3300031616	Ectomycorrhiza	FIHDNILSNFIARSKNHENYSYCRMNFVCNGIVDSLMEQ
Ga0307508_107675061	3300031616	Ectomycorrhiza	SYCNLNFIPDNMLPNFIARSKNHENCSSCRINFGRNEIVNFFFKKLSFT
Ga0307508_108408321	3300031616	Ectomycorrhiza	YCNLNFIPDNILPNFIARSKNHENCSSCRMNFVRNEIVNFF
Ga0307508_108974161	3300031616	Ectomycorrhiza	DNILLNFIARSKNHENCSSCRMNFVFNGIVDSLME
Ga0307514_100236031	3300031649	Ectomycorrhiza	SYCNLNFIFDNILPNFIARSKNGNCSSCRMNFVRNEIVNFFFKKLCFTRKTSI
Ga0307514_101577531	3300031649	Ectomycorrhiza	FIPDNILSNFIARSKNHGNCSSCRMTFVRNEMVNFFKKIVFYLKN
Ga0307514_101674921	3300031649	Ectomycorrhiza	NFIPDNILSNFIARSKNYKNCSSCRMNFVRNGIVDGLMV
Ga0307514_101893833	3300031649	Ectomycorrhiza	NNILSNFIARSKNNRNCNSCRMNFVRNGIVDGLMA
Ga0307514_102353901	3300031649	Ectomycorrhiza	SHCNINFIPDNILSNFITRSNNYENCIFYRMNFVSNGIINSLME
Ga0307514_102832301	3300031649	Ectomycorrhiza	IPNNILSNFIASSKNNRNCNSCRMNFVRNGIVDGLMA
Ga0307514_103004191	3300031649	Ectomycorrhiza	IPDNILPNFIARSKNHRNYNSCQMNFIRNGIVESLMEQ
Ga0307514_104096531	3300031649	Ectomycorrhiza	HCNLNFIHDNILPNFIARSKNHGNCSSCRMNFIRNGIVDSLIEQ
Ga0307514_104929511	3300031649	Ectomycorrhiza	CNLNFIPDNILPNFIARSKNHGNCSSCRMNFVRNEIVIFFLN
Ga0307514_105748171	3300031649	Ectomycorrhiza	CNLNFIPDNILPNFIARSKNHGNCSSCRMNFVRNEIVIFFKKN
Ga0307516_101588062	3300031730	Ectomycorrhiza	LYCNFNFIPDNILSNFIARSKNHENYSSCRMNFIRNEIVIFFKKIEFYSKI
Ga0307516_102454761	3300031730	Ectomycorrhiza	NFIHDNILPNFIARLKNHGNCSSNRMNFVCNGIVDNLMEQ
Ga0307516_102781811	3300031730	Ectomycorrhiza	HCNINFIPDNILSNFITHSKNYENCSSYRMNFVRNGIINSLME
Ga0307516_103830671	3300031730	Ectomycorrhiza	SYCNLNFIPDNILPNFIARSKNHENCSSCRMNFVRNEIVNFF
Ga0307516_103947522	3300031730	Ectomycorrhiza	MPDNILSNFITRSKYYENCSSYRMNFVRNGIINSLM
Ga0307516_105189561	3300031730	Ectomycorrhiza	FIPDNILPNFIARSKNHGNCSSCQMNFVCNGIVDSLMEQ
Ga0307516_107291821	3300031730	Ectomycorrhiza	NFISDNILSNFITRSKSYENCSSYRMNFGRNEIINSLME
Ga0307516_109850791	3300031730	Ectomycorrhiza	FIPDNILSNFITRSKNYENCSSYQMNFVRNGIINCLME
Ga0307516_110087101	3300031730	Ectomycorrhiza	NLNFIPDNILSNFTACSKNHENYSSCQMNFVRNGIVDSLMKQ
Ga0307518_101227871	3300031838	Ectomycorrhiza	FIPNNILPNFIAHSKNHENCSFCRMNFVCNGIVDSLMEQ
Ga0307518_101366801	3300031838	Ectomycorrhiza	CNLNFILNNILPNFITRSKNHGNCSSCRVNFVCNGIVDSLME
Ga0307518_101856582	3300031838	Ectomycorrhiza	SDNILSNFITRSKSYENCSSYRMNFGRNEIINSLME
Ga0307518_101858851	3300031838	Ectomycorrhiza	PNNILPNFIARSKNHGNCSSCRMNFVCNGIVDSLMEQ
Ga0307518_102140661	3300031838	Ectomycorrhiza	NFIPNNILSNFIARSKNNRNCNSCRMNFVRNGIVDGLMA
Ga0307518_102753731	3300031838	Ectomycorrhiza	IYSNCNLNFIPDNILPNFIARSKNHENCSSCRMNFVRNEIVNFFKKN
Ga0307518_103604351	3300031838	Ectomycorrhiza	CNLNFIPDNILSNFIARSKNHGNCSSCQMNFVCNGIVDSLMEQ
Ga0307518_103722701	3300031838	Ectomycorrhiza	YSYCNLNFIPDNILPNFIARSKNHENCSSCRMNFVRNEIVNFC
Ga0307518_104171871	3300031838	Ectomycorrhiza	IPDNILSNFIARSKNYRNCSSCRMNFVRNEIVDGLMA
Ga0307518_105009182	3300031838	Ectomycorrhiza	FVPDDILHNFVACSKNHENCSSCRINFVRDGIVDNLME
Ga0307518_105707341	3300031838	Ectomycorrhiza	SYCNLNFIPDNILPNFIARSKNHENCSSCRMNFVRNEIVNFFKKN
Ga0307518_105917302	3300031838	Ectomycorrhiza	NFIPDNILSNFITHSKNYENCSSYRMNFVRNGIINSLME
Ga0307518_105927381	3300031838	Ectomycorrhiza	NLNFIPDNILSNFIARSKNHKNCSSCRMNFLRNKL
Ga0325403_10198432	3300032354	Xylem	MNFIPDNILSNFIARSKNYENCSSCRMNFVRNGIVDGLME
Ga0325403_10521732	3300032354	Xylem	MIPDNNLPNFIADSENHESCSSCRMNFVRNGIVDSLIEQ
Ga0325403_10526611	3300032354	Xylem	MIPDNNLLNFIAGSKNHQNCSSYRMNFVRNGIVDSLMEQ
Ga0325403_10562491	3300032354	Xylem	MYSYCNLNFISDNILTNFIACLKNHENCSFYRMNFVRNEIVKY
Ga0325403_10920021	3300032354	Xylem	CNLNFIPDNILPYFIACSKNHENCSFCRMNFVRNEIVIFFLN
Ga0325403_10923761	3300032354	Xylem	CNLNFIPDNILPYFIACSKNHENCSFCRMNFVRNEIVIFFLKLSFS
Ga0325403_11227861	3300032354	Xylem	SYCNLNFIPDNMLPNFIARSKNHENCSSCRINFGRNEIVIFLKKIEFYLKN
Ga0325403_11234831	3300032354	Xylem	SYCNLNFIHDNILSNFIARSKNHENCSFYRMNFVHNEIVIFF
Ga0325401_10124541	3300032355	Xylem	HSNINFISDNILSNFITRSKSYENCSSYRMNFGRNGIINSLIE
Ga0325401_10899131	3300032355	Xylem	HCNINFIPDNILFNFITCSKNYKNCSSYRMNFVRNEIINSLME
Ga0325401_11111871	3300032355	Xylem	NNILSNFIARSKNNRNCNSYRMNFVRNGIVDGLMA
Ga0325401_11427731	3300032355	Xylem	NFIPDNILSNFIARSKNYENCSSCRMNFIRNGIVDDLME
Ga0325401_12423891	3300032355	Xylem	DNILSNFIARSKNYRNYSSCRMNFVRNGIVDGLMA
Ga0325400_11471421	3300032374	Xylem	HSHYNINFIPGNILSNFITRSKYYENCSSYRINFVCNEIINSLME
Ga0325405_10556451	3300032389	Xylem	HCNLNFIPDNILPNFITCSKNHENCNSCHMNFVRNGIVDSLMEQ
Ga0325404_10287012	3300032390	Xylem	MNFIPDNILSNFIARSKNYENCSSCRMNFVRNGIVDDLMK
Ga0325404_11001281	3300032390	Xylem	YCNLNFISDNILTNFIACLKNHENCSFYRMNFVRNEIVKYFFKN
Ga0325411_10982351	3300032740	Xylem	CNINFIPDNILSNFITRSNNYANCSFYRMNFVRNGIINSLME
Ga0307507_101149594	3300033179	Ectomycorrhiza	DNILPNFIARSKNHGNCSSCRMNFVRNEIVIFFKKN
Ga0307507_104271771	3300033179	Ectomycorrhiza	FNCNLNFIHDNILSNFIASSKNHGNCSSCRINFICNKIIDSLMEQ
Ga0307507_104278951	3300033179	Ectomycorrhiza	IPDNILLNFIARRINHDNCSYCRMNFVHNEIVDFF
Ga0307507_105378641	3300033179	Ectomycorrhiza	DNILSNFIAHSKNHGNCSFCKMNFICNRIVDSLMEQ
Ga0307507_105807501	3300033179	Ectomycorrhiza	CNLNFIPNNILPNFIARSKNHENCSSCRMNFVRNEIVIFF
Ga0307507_105843111	3300033179	Ectomycorrhiza	NLNFIPDNILPNFIARSKNHENYRSCRMNFVRNEIVIFFLN
Ga0307507_106960521	3300033179	Ectomycorrhiza	NLNFIPDNILSNFIARVKNHGNCSSCRMNFVRNEIVIFFKKN
Ga0307507_106963571	3300033179	Ectomycorrhiza	HCNLNFIPDNILSNFIARSKNQGNCSSYRINFVRNGMVDGLMN
Ga0307507_107015871	3300033179	Ectomycorrhiza	DNILTNFIACLKNHENCSFYRMNFVRNEIVKYFLKN
Ga0307510_100815783	3300033180	Ectomycorrhiza	CNINFIPDNILSDFITCSQNYENCSSYRLNFIYNGIINSLIK
Ga0307510_101241871	3300033180	Ectomycorrhiza	INFIPDNILSNFITRSKNYENCSSYRMNFVRNGIINSLME
Ga0307510_101679071	3300033180	Ectomycorrhiza	DSILPNFITRSKNHENCNSCRMNLVYNGIVDSLIEQ
Ga0307510_102214841	3300033180	Ectomycorrhiza	NFIPDNILSNFIARSKNYRNCSSCRMNFVRNEIVDGLMA
Ga0307510_105710111	3300033180	Ectomycorrhiza	NFIPDNILPNFIARSKNHENCSSCRMNFVRNEIVNFC
Ga0307510_105730641	3300033180	Ectomycorrhiza	NLNFIPDNILPNFIARSKNHENCSSCRMNFVRNEIVKFFFKN
Ga0307510_106176891	3300033180	Ectomycorrhiza	SYYNLNFIPDNILSNFIARSKNHENCSTCPMNFVRNEIVNFFKKN
Ga0325419_057471_1897_2004	3300034389	Leaf	ISDNILTNFIACLKNHENCSFYRMNFVRNEIVKYF
Ga0325419_112929_2_163	3300034389	Leaf	YCNLNFIPDNILPNFIARSKNHENYRSCRMNFVRNEIVNFFFKKLSFTRKTSI
Ga0325421_140161_425_562	3300034689	Leaf	SYCNLNFIPDNILPNFIARSKNHENCSSYRINFGRNEIINFFFKN
Ga0325423_111133_1_111	3300034778	Leaf	PDNILSNFIARSKNYRNYSSCRMNFVRNGIVDGLMT
Ga0325407_065691_1637_1771	3300034899	Xylem	HCNLNFIPDNILPNFITCSKNHENCNSCHMNFVRNGIVDSLIEQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089604

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300028786	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM	Host-Associated	Open in IMG/M
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300030522	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM	Host-Associated	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031649	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM	Host-Associated	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031838	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM	Host-Associated	Open in IMG/M
3300032354	Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdKOR-R4	Host-Associated	Open in IMG/M
3300032355	Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdKOR-R2	Host-Associated	Open in IMG/M
3300032374	Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdKOR-R1	Host-Associated	Open in IMG/M
3300032389	Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-Control-R2	Host-Associated	Open in IMG/M
3300032390	Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-Control-R1	Host-Associated	Open in IMG/M
3300032740	Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdIQD-R4	Host-Associated	Open in IMG/M
3300033179	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM	Host-Associated	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M
3300034389	Populus deltoides microbial communities from Bellville, Georgia, United States - Leaf-Control-R4	Host-Associated	Open in IMG/M
3300034689	Populus deltoides microbial communities from Bellville, Georgia, United States - Leaf-PdIQD-R2	Host-Associated	Open in IMG/M
3300034778	Populus deltoides microbial communities from Bellville, Georgia, United States - Leaf-PdIQD-R4	Host-Associated	Open in IMG/M
3300034899	Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-Control-R4	Host-Associated	Open in IMG/M

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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