Metagenome Family F089660

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089660
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	50 residues
Representative Sequence	MTMNDNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLDLLALATLWLVVVPP
Number of Associated Samples	86
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.15 %
% of genes near scaffold ends (potentially truncated)	96.30 %
% of genes from short scaffolds (< 2000 bps)	91.67 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.778 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (54.630 % of family members)
Environment Ontology (ENVO)	Unclassified (71.296 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (62.963 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.75% β-sheet: 0.00% Coil/Unstructured: 66.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF02656	DUF202	6.48
PF04087	DUF389	5.56
PF00378	ECH_1	4.63
PF12697	Abhydrolase_6	2.78
PF02604	PhdYeFM_antitox	0.93
PF00891	Methyltransf_2	0.93
PF00196	GerE	0.93
PF00491	Arginase	0.93
PF05598	DUF772	0.93
PF00903	Glyoxalase	0.93
PF13515	FUSC_2	0.93
PF08327	AHSA1	0.93
PF01161	PBP	0.93
PF03861	ANTAR	0.93
PF12900	Pyridox_ox_2	0.93
PF11139	SfLAP	0.93
PF00484	Pro_CA	0.93
PF08044	DUF1707	0.93
PF13676	TIR_2	0.93
PF07690	MFS_1	0.93
PF06863	DUF1254	0.93
PF04185	Phosphoesterase	0.93
PF07885	Ion_trans_2	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2149	Uncharacterized membrane protein YidH, DUF202 family	Function unknown [S]	6.48
COG1808	Uncharacterized membrane protein AF0785, contains DUF389 domain	Function unknown [S]	5.56
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.93
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.93
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.93
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.93
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.93
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.93
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.93
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.78 %
Unclassified	root	N/A	47.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.78 %
Unclassified	root	N/A	47.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.78 %
Unclassified	root	N/A	47.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.22 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.22 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.22 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	24.07 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.22 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5.56 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.63 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.78 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.93 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.93 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.22 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	5.56 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3.70 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	2.78 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	2.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.93 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.22 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	5.56 %
Humibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus	2.78 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2.78 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	2.78 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.93 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	0.93 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.22 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	5.56 %
Nocardia alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia alba	2.78 %
Humibacillus xanthopallidus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus → Humibacillus xanthopallidus	2.78 %
Actinomadura latina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura latina	1.85 %
Kutzneria buriramensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → Kutzneria buriramensis	0.93 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.93 %
Micromonospora inyonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora inyonensis	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_108363110	Not Available	516	Open in IMG/M
3300006028\|Ga0070717_10325346	Not Available	1370	Open in IMG/M
3300006162\|Ga0075030_100838619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	726	Open in IMG/M
3300010048\|Ga0126373_10306481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1586	Open in IMG/M
3300010048\|Ga0126373_11210075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	821	Open in IMG/M
3300010048\|Ga0126373_12705640	Not Available	553	Open in IMG/M
3300010366\|Ga0126379_11964285	Not Available	688	Open in IMG/M
3300010371\|Ga0134125_12086269	Not Available	616	Open in IMG/M
3300015374\|Ga0132255_106233747	Not Available	505	Open in IMG/M
3300016294\|Ga0182041_11434414	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300016319\|Ga0182033_11056865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	724	Open in IMG/M
3300016341\|Ga0182035_10663526	Not Available	906	Open in IMG/M
3300016341\|Ga0182035_11095861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	708	Open in IMG/M
3300016341\|Ga0182035_12026309	Not Available	523	Open in IMG/M
3300016357\|Ga0182032_10341784	Not Available	1195	Open in IMG/M
3300016357\|Ga0182032_11509978	Not Available	583	Open in IMG/M
3300016371\|Ga0182034_12037023	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300016387\|Ga0182040_11260670	Not Available	623	Open in IMG/M
3300016404\|Ga0182037_11040036	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300016422\|Ga0182039_11370220	Not Available	642	Open in IMG/M
3300017926\|Ga0187807_1174097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	693	Open in IMG/M
3300018001\|Ga0187815_10311002	Not Available	668	Open in IMG/M
3300018060\|Ga0187765_10397867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	850	Open in IMG/M
3300018086\|Ga0187769_10464818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora inyonensis	954	Open in IMG/M
3300020580\|Ga0210403_10924636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus → Humibacillus xanthopallidus	687	Open in IMG/M
3300020581\|Ga0210399_10193299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1691	Open in IMG/M
3300021407\|Ga0210383_11326080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → Kutzneria buriramensis	601	Open in IMG/M
3300021560\|Ga0126371_12544270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300025898\|Ga0207692_10276343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1015	Open in IMG/M
3300025916\|Ga0207663_10545006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus → Humibacillus xanthopallidus	906	Open in IMG/M
3300029999\|Ga0311339_10197502	All Organisms → cellular organisms → Bacteria	2281	Open in IMG/M
3300031543\|Ga0318516_10305313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	919	Open in IMG/M
3300031549\|Ga0318571_10329465	Not Available	581	Open in IMG/M
3300031561\|Ga0318528_10386405	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300031564\|Ga0318573_10367676	Not Available	772	Open in IMG/M
3300031640\|Ga0318555_10242380	Not Available	974	Open in IMG/M
3300031679\|Ga0318561_10600479	Not Available	606	Open in IMG/M
3300031679\|Ga0318561_10773135	Not Available	528	Open in IMG/M
3300031680\|Ga0318574_10102248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1590	Open in IMG/M
3300031682\|Ga0318560_10172791	Not Available	1149	Open in IMG/M
3300031713\|Ga0318496_10582648	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300031719\|Ga0306917_11490141	Not Available	521	Open in IMG/M
3300031724\|Ga0318500_10472474	Not Available	629	Open in IMG/M
3300031724\|Ga0318500_10642059	Not Available	539	Open in IMG/M
3300031744\|Ga0306918_11508917	Not Available	513	Open in IMG/M
3300031748\|Ga0318492_10311996	Not Available	819	Open in IMG/M
3300031751\|Ga0318494_10090134	All Organisms → cellular organisms → Bacteria	1678	Open in IMG/M
3300031764\|Ga0318535_10114691	Not Available	1187	Open in IMG/M
3300031765\|Ga0318554_10151599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1316	Open in IMG/M
3300031765\|Ga0318554_10639153	Not Available	598	Open in IMG/M
3300031769\|Ga0318526_10254557	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300031770\|Ga0318521_10083996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1723	Open in IMG/M
3300031770\|Ga0318521_10108778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1536	Open in IMG/M
3300031770\|Ga0318521_10784141	Not Available	580	Open in IMG/M
3300031778\|Ga0318498_10384749	Not Available	625	Open in IMG/M
3300031779\|Ga0318566_10250638	Not Available	878	Open in IMG/M
3300031781\|Ga0318547_11059901	Not Available	507	Open in IMG/M
3300031793\|Ga0318548_10579688	Not Available	546	Open in IMG/M
3300031795\|Ga0318557_10280510	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300031795\|Ga0318557_10463323	Not Available	583	Open in IMG/M
3300031796\|Ga0318576_10294867	Not Available	766	Open in IMG/M
3300031797\|Ga0318550_10332338	Not Available	737	Open in IMG/M
3300031798\|Ga0318523_10635091	Not Available	525	Open in IMG/M
3300031859\|Ga0318527_10322390	Not Available	658	Open in IMG/M
3300031879\|Ga0306919_10688024	Not Available	788	Open in IMG/M
3300031890\|Ga0306925_11828500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia alba	581	Open in IMG/M
3300031896\|Ga0318551_10026957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2742	Open in IMG/M
3300031897\|Ga0318520_10964254	Not Available	538	Open in IMG/M
3300031897\|Ga0318520_11066837	Not Available	511	Open in IMG/M
3300031910\|Ga0306923_10505261	Not Available	1367	Open in IMG/M
3300031912\|Ga0306921_10013603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8759	Open in IMG/M
3300031912\|Ga0306921_10086342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3619	Open in IMG/M
3300031912\|Ga0306921_10556414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1330	Open in IMG/M
3300031941\|Ga0310912_10456006	Not Available	997	Open in IMG/M
3300031941\|Ga0310912_10502895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	945	Open in IMG/M
3300031942\|Ga0310916_10320384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1315	Open in IMG/M
3300031942\|Ga0310916_11756725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300031945\|Ga0310913_10446791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura latina	918	Open in IMG/M
3300031954\|Ga0306926_10189340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2553	Open in IMG/M
3300031981\|Ga0318531_10423733	Not Available	602	Open in IMG/M
3300032001\|Ga0306922_10347614	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300032008\|Ga0318562_10399699	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300032039\|Ga0318559_10143267	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300032042\|Ga0318545_10346278	Not Available	535	Open in IMG/M
3300032043\|Ga0318556_10328054	Not Available	800	Open in IMG/M
3300032043\|Ga0318556_10709090	Not Available	523	Open in IMG/M
3300032044\|Ga0318558_10275114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	831	Open in IMG/M
3300032054\|Ga0318570_10427803	Not Available	604	Open in IMG/M
3300032055\|Ga0318575_10486594	Not Available	626	Open in IMG/M
3300032060\|Ga0318505_10570707	Not Available	532	Open in IMG/M
3300032060\|Ga0318505_10580630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia alba	527	Open in IMG/M
3300032065\|Ga0318513_10199314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura latina	964	Open in IMG/M
3300032091\|Ga0318577_10335962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	722	Open in IMG/M
3300032094\|Ga0318540_10427232	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300032205\|Ga0307472_100380630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1172	Open in IMG/M
3300032805\|Ga0335078_10020214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9893	Open in IMG/M
3300032892\|Ga0335081_10292627	All Organisms → cellular organisms → Bacteria	2163	Open in IMG/M
3300032892\|Ga0335081_10645041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1296	Open in IMG/M
3300032897\|Ga0335071_10636579	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300032898\|Ga0335072_10713313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia alba	979	Open in IMG/M
3300032954\|Ga0335083_10758735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Humibacillus → Humibacillus xanthopallidus	782	Open in IMG/M
3300032955\|Ga0335076_10011124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9065	Open in IMG/M
3300032955\|Ga0335076_11609961	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300032955\|Ga0335076_11807212	Not Available	501	Open in IMG/M
3300033134\|Ga0335073_11802114	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300033289\|Ga0310914_10295931	Not Available	1459	Open in IMG/M
3300033289\|Ga0310914_10325613	Not Available	1388	Open in IMG/M
3300033290\|Ga0318519_10034178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2428	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.30%
Aquatic	Environmental → Aquatic	2.78%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.37%
Freshwater	Environmental → Aquatic → Freshwater	1.85%
Sediment	Environmental → Aquatic → Sediment	0.93%
Peat	Environmental → Terrestrial → Peat	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.11%
Loam	Environmental → Terrestrial → Soil → Loam	3.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	75.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.11%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.78%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	54.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.44%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1083631101	3300005332	Tropical Forest Soil	MTMSDNDHPSDQGTDADRAVNDPDRLAQYEARTREPLDLLALATLWLVV
Ga0070717_103253461	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTMNDNDRLSGRGADADGAVSDPGRLAQYEARTREPLDLLALATLWLVVVPPGDFGHEV
Ga0075030_1008386192	3300006162	Watersheds	MSDSDNLPGQGTTADGPVNNMDRLAQYEARSQEPLDLLALATLWLV
Ga0126373_103064814	3300010048	Tropical Forest Soil	MTMNDKDHLPGLGPGADRAVNDPGRLTEYEARTRE
Ga0126373_112100751	3300010048	Tropical Forest Soil	MTMSDNDHRSNQGIDADRAVSDPDRLAGYEARTREPLDLLALATLWLVVVPP
Ga0126373_127056402	3300010048	Tropical Forest Soil	MTMNDNDHRPGPGADTDHAGNDPGRLSEYEARTRAPLDLLALA
Ga0126379_119642851	3300010366	Tropical Forest Soil	MNDNDRLPGRGADADRAANDPGRLAAYEARTREPLDLLALATLWLVV
Ga0134125_120862692	3300010371	Terrestrial Soil	MTMNDNDPRSGPSAGADRAVNDPGRLAEYEARTREPLDLLALATLWLVVVPTGTG*
Ga0132255_1062337471	3300015374	Arabidopsis Rhizosphere	MNDNDRLPGRGANADRAVNDPERLAEYEARTREPLDLLALAT
Ga0182041_114344142	3300016294	Soil	MIMNDNDHLSGQGADAARAVNSPGRLGEYEARTREPLDLLALATLWLVVVPPGDFGH
Ga0182033_110568653	3300016319	Soil	MSMTDNDNLPRRGADADQAVTGPDRLAWYEASSREPLDLLALATLWLVVVPWW
Ga0182035_106635261	3300016341	Soil	MTMTDNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLDLLALATLWLVVVPP
Ga0182035_110958611	3300016341	Soil	MSMTDNDNLPRRGADADQAVTGPDRLAWYEASSREPLDLLALATLWLVVVPWWDF
Ga0182035_120263092	3300016341	Soil	MTMTDNDNLPGRGAEDGPAVTGPDRLAIYEASTREPLDLLALATLWLVVVPPGDFG
Ga0182032_103417842	3300016357	Soil	MTMNDNDHRSGQHGNADLPGNPGRLAEYEAKTRQPLDLLALATLWLVVVPPGDFG
Ga0182032_115099781	3300016357	Soil	MTMNDKDHLPGPGAGADRAGNEPGRMAEYEARTREPLDLLALATLWLVVVPVWD
Ga0182034_120370231	3300016371	Soil	MTMNNNDRRPGPGAEAGHAVNDPGRLARYEARTRGPLDLLALATLWLVVVPVWDFGHEVT
Ga0182040_112606702	3300016387	Soil	MTMTDNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLDLLALATLWLVVVPPGDFG
Ga0182037_110400361	3300016404	Soil	MTMNDNDRRPGPGAEAGHAENDPGRLAEYEARTRGPLDLLALATLWLV
Ga0182039_113702201	3300016422	Soil	MIMNDNDRLSGQGADAARAVNSPGRLGEYEARTREPLDLL
Ga0187807_11740972	3300017926	Freshwater Sediment	MTMSDNAHRSGRGADADRAVNGPGRLAGYEARTQEPLDLLALATLWLSVVL
Ga0187815_103110021	3300018001	Freshwater Sediment	MTMTDNGNRPDWDAGPVPAGKDPGRLARYEASTRQPLDLLALATLWLVVVPPGDFGHDVT
Ga0187765_103978671	3300018060	Tropical Peatland	MTMNDNDRLPGRGADADRTVNDPGRLAEYEARTQDPLDLLALATLWLVVVPWWDYGHEVKYV
Ga0187769_104648181	3300018086	Tropical Peatland	MTMNDNDHLPGQGGADRAVNDAGRLARYEARTREPLDLLALATLWLVV
Ga0210403_109246361	3300020580	Soil	MTMTDNAHRPGRGADADRAANDQDRLAEYQDRTRDQLDLLALSTLWLVVVPPGDFG
Ga0210399_101932992	3300020581	Soil	MTMNDNDRPPGRGADADRAVNDPGRLAEYEARTREPLDLLALATLWLVVIPPG
Ga0210383_113260802	3300021407	Soil	MTMNDNDHRSGRAADADRAMNDPGRLDEYETRTREPLDLLALATLWLVAVPPGDFGHDVT
Ga0126371_125442701	3300021560	Tropical Forest Soil	MTMNDNDSRPGAGAEAGHAGNDPDRLAQYEARTRAPLDLLALATLWLVVVP
Ga0207692_102763433	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTMNDNDRLPGRGADADRAVNDPGRLAEYEARTREPLDLM
Ga0207663_105450061	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTMTDNAHRPGRRADADRAANDPDRLAEYQGRTRDLLDLLALATLWLVVVPPGDFGHGVTYA
Ga0311339_101975024	3300029999	Palsa	MTMNDDAHLPGRSADANRAMNDPGRLAEYEARTREPLDLLALATLWLVVVPPGDF
Ga0318516_103053131	3300031543	Soil	MTLNDNDRRPGPGAEAGHAVNDPGRLAEYEARTRG
Ga0318571_103294651	3300031549	Soil	MTMSDNDHPSDQGTDADRAVNDPDRLAQYEARTREPLDLLALATLWLVVVPPWDFGHD
Ga0318528_103864051	3300031561	Soil	MTMNDNDRRPGPGAEAGHAENDPGRLAEYEARTRGP
Ga0318573_103676762	3300031564	Soil	MTMNDNDRLPGQGADADRAGNDPERLAEYEARTREPLDLLALATLWLVV
Ga0318555_102423802	3300031640	Soil	MIMNDNDHQPGRGAGAAGAADDSDRLAEYEARTQEPLDLLALATLWLVV
Ga0318561_106004791	3300031679	Soil	MTMNDNDHRSGQHGNADLPGNPGRLAEYEAKTRQPLDLLALATLWLVVVPRGDFGHD
Ga0318561_107731352	3300031679	Soil	MTMTDNDRRPGRGAGAGHAVNDRGRLAGYEARTRGPLDLLALATLWLVLVPVGDFGHAVT
Ga0318574_101022483	3300031680	Soil	MTMTDNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLDLLALATLWLVV
Ga0318560_101727911	3300031682	Soil	MTMSDNDHPSDQGTDAGRAVNDPDRLAQYEARTREPLD
Ga0318496_105826481	3300031713	Soil	MTMNDNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLDLLALATLW
Ga0306917_114901411	3300031719	Soil	MTMSDNDHPSDQGSDAGRAVNDPDRLAQYEARTREPLDLLALATLWLVV
Ga0318500_104724741	3300031724	Soil	MTMSDNDHPSDQGTDAGRAMNDPDRLAQYEARTREPLDLLALAT
Ga0318500_106420591	3300031724	Soil	MTMTDNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLDLLALATLWLVVVP
Ga0306918_115089171	3300031744	Soil	MTMNDKDHLPGPGAGADRAGNEPGRMAEYEARTREPLDLLALATLWLVVVPVWDY
Ga0318492_103119963	3300031748	Soil	MTMTDNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLD
Ga0318494_100901342	3300031751	Soil	MTMNDNDRRPGPGAEAGHAENDPGRLAEYEARTRGPLDLLALATLWLVV
Ga0318535_101146912	3300031764	Soil	MTMSDNDHPSDQGSDAGRAVNDPDRLAQYEARTREPLDLLALATLW
Ga0318554_101515993	3300031765	Soil	MTMTDNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLDLLALATLWLVVVPV
Ga0318554_106391532	3300031765	Soil	MTMNDNDRRPGPGAEAGHAENDPGRLAEYEARTRGPLDLLALATLWLVVVPV
Ga0318526_102545571	3300031769	Soil	MTMNDNDRRPGPGAEAGHAENDPGRLAEYEARTRGPLDLLALA
Ga0318521_100839961	3300031770	Soil	MTMTDNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLDLLAL
Ga0318521_101087781	3300031770	Soil	MTMNDNDHRPGPDADADHAVNDPGRLAEYEARTREPLDLLA
Ga0318521_107841411	3300031770	Soil	MTLNDNDRRPGPGAEAGHAVNNPGRLAEYEARTRGPLDLLALAT
Ga0318498_103847492	3300031778	Soil	MTMNDNDHRSGQHGNADLPGNPGRLAEYEAKTRQPLDLLALATLWLVVVPPGDFGHKVV
Ga0318566_102506382	3300031779	Soil	MTLNDNDRRPGPGAEAGHAVNNPGRLAEYEARTRGPLDLLALATLWLVVVPV
Ga0318547_110599011	3300031781	Soil	MTMNDNDRVPGLGAGADRAVNDPSRLAEYEARTRDPLDLLALATLWLVVVPWWD
Ga0318548_105796881	3300031793	Soil	MTMSDNDHPSDQGSDAGRAVNDPDRLAQYEARTREPLD
Ga0318557_102805101	3300031795	Soil	MTMNDNDRRPGPGAEAGHAENDPGRLAEYEARTRGPLDLLALATLWLVVV
Ga0318557_104633232	3300031795	Soil	MTMTDNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLDLLALATLWLVVVPPGDFGHDV
Ga0318576_102948672	3300031796	Soil	MTMNDKDHLPGPGAGADRAGNEPGRMAEYEARTREPLDLLALATLWLVVVPVWDYGH
Ga0318550_103323382	3300031797	Soil	MTMSDNDHPSDQGTDAGRAVNDPDRLAQYEARTREP
Ga0318523_106350911	3300031798	Soil	MTMNDNDRLPGQGADADRAGNDPERLAEYEARTREPLDLLALATLWLVVVPWWDYGHEVK
Ga0318527_103223901	3300031859	Soil	MTMNDNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLDLLALA
Ga0306919_106880242	3300031879	Soil	MTMNDNDRLPGQGADADRAGNDPERLAEYEARTREPLDLLALATLWLVVVPWWDYGHE
Ga0306925_118285001	3300031890	Soil	MTMNDNDRLPGQGADADRAGNDPERLAEYEARTREPLDLLALATLWLVVVPWDDYGHGTR
Ga0318551_100269571	3300031896	Soil	MTMTDNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLDLLALATLW
Ga0318520_109642541	3300031897	Soil	MTMNDNDHRSGQDGSADLPGNPGRLGEYEARTRQPLDLLALATLWLVV
Ga0318520_110668371	3300031897	Soil	MTLNDNDRRPGPGAEAGHAVNNPGRLAEYEARTRGPLDLLALATLWLVVV
Ga0306923_105052612	3300031910	Soil	MTMNDNDRRPGPGADADHAVNDPGRLAEYEARTRGPLDLLALATLWLVVVPVWDFGH
Ga0306921_100136031	3300031912	Soil	MTMTDNDNLPGRGAAGGLGVTGPDRLARYEASTREPLDLLALATLWLVVVPPGDFGH
Ga0306921_100863421	3300031912	Soil	MTMTDNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLDLLALATL
Ga0306921_105564141	3300031912	Soil	MTMNDNDRLPGQGADADRAGNDPERLAEYEARTREPLDLLALATLWLVVVPWWDY
Ga0310912_104560062	3300031941	Soil	MTMNDNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLDLLALATLWLVVVPP
Ga0310912_105028952	3300031941	Soil	MTMNDNDRLPGQGADADRAGNDPERLAEYEARTREPLDLLALATLWLVVVP
Ga0310916_103203842	3300031942	Soil	MTMNDNDRRPGPGAEAGHAVNDPGRLAQYEARTRGPLDLLALATLWLVVVPPGDFGHEV
Ga0310916_117567251	3300031942	Soil	MSMTDNDNLPRRGADADQAVTGPDRLAWYEASSREPLDLLALATLWLVVVPWWDFG
Ga0310913_104467911	3300031945	Soil	MTMTDNDNLPGRDAEGGLGVTGPDRLARYEASTREPLDLLALATLWLVVVPPGD
Ga0306926_101893404	3300031954	Soil	MTMTDNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLDLLALAT
Ga0318531_104237332	3300031981	Soil	MTMNDNDRRPGPGAEAGHAENDPGRLAEYEARTRRPL
Ga0306922_103476143	3300032001	Soil	MTMNDNDHRSGQHGNADLPGNPGRLAEYEAKTRQPLDLLALATLWLVVVPRGDFG
Ga0318562_103996991	3300032008	Soil	MTMNDNDDLPGRGADAARAVTDPDRLAEYQARTREPLDLLALATLW
Ga0318559_101432671	3300032039	Soil	MTMNDNDRRPAPGAEAGHAGNDPGRLARYEARTRGPLDLLALATLWLVVVPV
Ga0318545_103462781	3300032042	Soil	MTMNDNDRRPGPGAEAGHAENDPGRLAEYEARTRGPLDLLALATLWLVVVPPGDFGHEVT
Ga0318556_103280541	3300032043	Soil	MTMTDNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLDLLALATLWLV
Ga0318556_107090901	3300032043	Soil	MTMTDNDRRPGRGAGAGHAVNDRGRLAGYEARTRGPLDLLALATLWLVLV
Ga0318558_102751141	3300032044	Soil	MTMNYNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLDLLALATLWLVVV
Ga0318570_104278031	3300032054	Soil	MTMNDNDHRPGPDADADHAVNDPGRLAEYEARTRE
Ga0318575_104865942	3300032055	Soil	MTMNDNDRRPGPGAEAGHAENDPGRLAEYEARTRGPLDLLALATLWLVVVPVWD
Ga0318505_105707071	3300032060	Soil	MTMNDNDRRPGPGAEAGHTMNDPGRLAEYEARTRGPLDLLALATLWLV
Ga0318505_105806302	3300032060	Soil	MTMNDNDRLPGQGADADRAGNDPERLAEYEARTREPLDLLALATLWLVVVPWSDYGHGTR
Ga0318513_101993143	3300032065	Soil	MTMTDNDNLPGRGAEGGLGVTGPDRLARYEASTREPLDLLALATLWLVVVPPGDFG
Ga0318577_103359621	3300032091	Soil	MTMTDNDNLPGRGAAGGLGVTGPDRLARYEASTREPLDLLALATLWLVVVPPGDFG
Ga0318540_104272321	3300032094	Soil	MIMNDNDRLSGQGADAARAVNSSGRLGEYEARTREPLDLLALATLWLV
Ga0307472_1003806302	3300032205	Hardwood Forest Soil	MTMNDNDPRSGPSAGADRAVNDPGRLAEYEARTREPLDLLALATLWLVVVPVGLRA
Ga0335078_100202141	3300032805	Soil	MTMNDNDRLPGRAGGADRAVSDPGRLAGYEARTRDPLDLLALATLWLVVV
Ga0335081_102926271	3300032892	Soil	MTMNDNDRVPGRGAGADRAENDPSRLAEYEARTRNPLDLLALA
Ga0335081_106450411	3300032892	Soil	MTMNDNDRLPGRAGGADRAVSDPGRLAGYEARTRDPLDLLALAT
Ga0335071_106365792	3300032897	Soil	MTMNDNDRLPGLGADADRTVNDPGRLAEYEARTQEPLDLLALATL
Ga0335072_107133132	3300032898	Soil	MTMNDNDRLPGRADGADRAVNDPGRLAEYEARTRDPLDLLALATLWLVVVP
Ga0335083_107587352	3300032954	Soil	MPMTDNAHRPGRGADADRAANDPDRLAEYQGRTRDLLDLLALATLWLVVVPPGDYGHRVS
Ga0335076_100111241	3300032955	Soil	VTDDDSRSDRDRADQATSDTGRLAVYEDSTREPLDLLALATLWLVVVPPGDF
Ga0335076_116099612	3300032955	Soil	MPMTDNAHRPGRGADADRAANDPDRLAEYQGRTRDLLDLLALATLWLV
Ga0335076_118072121	3300032955	Soil	MTMNDNDRVPGLGAGADRAGNDPGRLAEYEARTRNPLDLLALATLWLVVVPW
Ga0335073_118021141	3300033134	Soil	MTMNDNDRVPVLGAGADRAGNDPGRLAEYEARTQNPLDLLALATLWLVVVPW
Ga0310914_102959312	3300033289	Soil	MTMNDNDRRPGPGAEAGHAVNDPGRLAEYEARTRGPLD
Ga0310914_103256132	3300033289	Soil	MTMSDNDHPSDQGSDAGRAVNDPDRLAQYEARTREPLDLLALATLWLVVVPPWDFGHD
Ga0318519_100341781	3300033290	Soil	MTMTDNDNLPGRGAAGGLGVTGPDRLARYEASTREPLDLLALATLWLVVVPPGDFGHGVT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089660

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences