Metagenome / Metatranscriptome Family F089692

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089692
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	80 residues
Representative Sequence	MPLLRKSCLCLLGAVLATSVLTTGCQSSQPAQTASQPAPNETVIYNKWEVETHRPHKEIAQRPPEEQKEYHDWRQQHPDNR
Number of Associated Samples	80
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.15 %
% of genes near scaffold ends (potentially truncated)	30.56 %
% of genes from short scaffolds (< 2000 bps)	66.67 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (25.926 % of family members)
Environment Ontology (ENVO)	Unclassified (43.519 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.481 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 27.52% β-sheet: 0.00% Coil/Unstructured: 72.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF12002	MgsA_C	12.04
PF16193	AAA_assoc_2	11.11
PF13899	Thioredoxin_7	11.11
PF01850	PIN	8.33
PF14526	Cass2	4.63
PF00578	AhpC-TSA	1.85
PF00588	SpoU_methylase	1.85
PF14384	BrnA_antitoxin	1.85
PF01551	Peptidase_M23	1.85
PF03869	Arc	1.85
PF00990	GGDEF	1.85
PF13380	CoA_binding_2	1.85
PF08032	SpoU_sub_bind	0.93
PF04365	BrnT_toxin	0.93
PF03167	UDG	0.93
PF01300	Sua5_yciO_yrdC	0.93
PF00664	ABC_membrane	0.93
PF01061	ABC2_membrane	0.93
PF08534	Redoxin	0.93
PF10387	DUF2442	0.93
PF04519	Bactofilin	0.93
PF13711	DUF4160	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	2.78
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	1.85
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	1.85
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.93
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.93
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.93
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.93
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	48.15 %
Unclassified	root	N/A	33.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	33.33 %
Unclassified	root	N/A	33.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	33.33 %
Unclassified	root	N/A	33.33 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	33.33 %
Unclassified	root	N/A	33.33 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	8.33 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	5.56 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.85 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	5.56 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	5.56 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	1.85 %
pseudomallei group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	5.56 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	5.56 %
Granulicella sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp.	1.85 %
Burkholderia pseudomallei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	5.56 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	5.56 %
Granulicella sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp.	1.85 %
Burkholderia pseudomallei 1710b	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_100038319	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3677	Open in IMG/M
3300005591\|Ga0070761_10109837	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300005591\|Ga0070761_10527807	Not Available	730	Open in IMG/M
3300005602\|Ga0070762_11269434	Not Available	511	Open in IMG/M
3300005712\|Ga0070764_10060008	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M
3300009635\|Ga0116117_1138137	Not Available	623	Open in IMG/M
3300009709\|Ga0116227_11433638	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300011120\|Ga0150983_10021886	Not Available	1159	Open in IMG/M
3300014160\|Ga0181517_10000496	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	52616	Open in IMG/M
3300014168\|Ga0181534_10304197	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300014169\|Ga0181531_10069149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	2081	Open in IMG/M
3300014169\|Ga0181531_10836468	Not Available	575	Open in IMG/M
3300014169\|Ga0181531_10902174	Not Available	553	Open in IMG/M
3300014199\|Ga0181535_10364912	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300014492\|Ga0182013_10014650	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	7646	Open in IMG/M
3300014492\|Ga0182013_10016499	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7015	Open in IMG/M
3300014492\|Ga0182013_10020156	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6071	Open in IMG/M
3300014492\|Ga0182013_10067661	All Organisms → cellular organisms → Bacteria	2580	Open in IMG/M
3300014493\|Ga0182016_10012089	All Organisms → cellular organisms → Bacteria → Acidobacteria	8289	Open in IMG/M
3300014493\|Ga0182016_10016584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	6782	Open in IMG/M
3300014493\|Ga0182016_10061516	All Organisms → cellular organisms → Bacteria	2845	Open in IMG/M
3300014493\|Ga0182016_10269090	Not Available	1057	Open in IMG/M
3300014495\|Ga0182015_11020130	Not Available	512	Open in IMG/M
3300014499\|Ga0182012_10080779	Not Available	2498	Open in IMG/M
3300014499\|Ga0182012_10445662	Not Available	848	Open in IMG/M
3300014501\|Ga0182024_10001106	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	69851	Open in IMG/M
3300014501\|Ga0182024_10048632	All Organisms → cellular organisms → Bacteria → Acidobacteria	6774	Open in IMG/M
3300014501\|Ga0182024_10051367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6527	Open in IMG/M
3300014655\|Ga0181516_10007004	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	6668	Open in IMG/M
3300014655\|Ga0181516_10409132	Not Available	693	Open in IMG/M
3300017931\|Ga0187877_1215516	Not Available	749	Open in IMG/M
3300017946\|Ga0187879_10276525	Not Available	934	Open in IMG/M
3300017948\|Ga0187847_10036709	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2875	Open in IMG/M
3300017948\|Ga0187847_10437797	Not Available	721	Open in IMG/M
3300017988\|Ga0181520_10001264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	51968	Open in IMG/M
3300017988\|Ga0181520_10781271	Not Available	646	Open in IMG/M
3300018038\|Ga0187855_10046916	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2700	Open in IMG/M
3300018042\|Ga0187871_10034212	All Organisms → cellular organisms → Bacteria	3157	Open in IMG/M
3300018043\|Ga0187887_10405304	Not Available	804	Open in IMG/M
3300019268\|Ga0181514_1238062	All Organisms → cellular organisms → Bacteria → Acidobacteria	1183	Open in IMG/M
3300019787\|Ga0182031_1324017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2487	Open in IMG/M
3300021180\|Ga0210396_11230031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300021402\|Ga0210385_10001449	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14764	Open in IMG/M
3300021405\|Ga0210387_11763080	Not Available	523	Open in IMG/M
3300021433\|Ga0210391_10292430	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300021433\|Ga0210391_11346312	Not Available	550	Open in IMG/M
3300021475\|Ga0210392_10415689	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300022715\|Ga0242678_1057054	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300022872\|Ga0224526_1002520	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	5833	Open in IMG/M
3300027609\|Ga0209221_1165677	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300027853\|Ga0209274_10080484	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300028552\|Ga0302149_1127856	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300028560\|Ga0302144_10003778	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5158	Open in IMG/M
3300028560\|Ga0302144_10052054	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1311	Open in IMG/M
3300028560\|Ga0302144_10242427	Not Available	583	Open in IMG/M
3300028566\|Ga0302147_10043158	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300028574\|Ga0302153_10011334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3038	Open in IMG/M
3300028574\|Ga0302153_10267558	Not Available	585	Open in IMG/M
3300028745\|Ga0302267_10096034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei → Burkholderia pseudomallei 1710b	1465	Open in IMG/M
3300028745\|Ga0302267_10450864	Not Available	525	Open in IMG/M
3300028748\|Ga0302156_10007325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	7476	Open in IMG/M
3300028759\|Ga0302224_10353458	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300028765\|Ga0302198_10091167	Not Available	1690	Open in IMG/M
3300028779\|Ga0302266_10253973	Not Available	653	Open in IMG/M
3300028788\|Ga0302189_10006117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	8503	Open in IMG/M
3300028860\|Ga0302199_1007866	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4511	Open in IMG/M
3300028866\|Ga0302278_10128654	All Organisms → cellular organisms → Bacteria → Acidobacteria	1354	Open in IMG/M
3300028874\|Ga0302155_10093445	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1344	Open in IMG/M
3300029908\|Ga0311341_10431698	Not Available	759	Open in IMG/M
3300029911\|Ga0311361_10548736	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1126	Open in IMG/M
3300029913\|Ga0311362_11182971	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	572	Open in IMG/M
3300029914\|Ga0311359_10292676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1351	Open in IMG/M
3300029920\|Ga0302142_1150424	Not Available	713	Open in IMG/M
3300029944\|Ga0311352_11060940	Not Available	621	Open in IMG/M
3300029951\|Ga0311371_10105201	All Organisms → cellular organisms → Bacteria	4476	Open in IMG/M
3300029951\|Ga0311371_11618964	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300029955\|Ga0311342_11108853	Not Available	577	Open in IMG/M
3300029982\|Ga0302277_1108047	Not Available	1199	Open in IMG/M
3300029986\|Ga0302188_10183176	Not Available	891	Open in IMG/M
3300029988\|Ga0302190_10426295	Not Available	501	Open in IMG/M
3300030007\|Ga0311338_11454387	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300030044\|Ga0302281_10038835	All Organisms → cellular organisms → Bacteria	2521	Open in IMG/M
3300030045\|Ga0302282_1093550	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1257	Open in IMG/M
3300030046\|Ga0302305_1293293	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300030503\|Ga0311370_12352110	Not Available	518	Open in IMG/M
3300030506\|Ga0302194_10034339	All Organisms → cellular organisms → Bacteria → Acidobacteria	2620	Open in IMG/M
3300030519\|Ga0302193_10307240	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	833	Open in IMG/M
3300030520\|Ga0311372_11295699	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	921	Open in IMG/M
3300030618\|Ga0311354_10117839	All Organisms → cellular organisms → Bacteria	2944	Open in IMG/M
3300030688\|Ga0311345_10388639	Not Available	1259	Open in IMG/M
3300030906\|Ga0302314_10234143	All Organisms → cellular organisms → Bacteria	2204	Open in IMG/M
3300031027\|Ga0302308_10679667	Not Available	586	Open in IMG/M
3300031234\|Ga0302325_10159154	All Organisms → cellular organisms → Bacteria → Acidobacteria	4011	Open in IMG/M
3300031234\|Ga0302325_12479622	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300031236\|Ga0302324_101793926	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300031525\|Ga0302326_10201433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	3322	Open in IMG/M
3300031708\|Ga0310686_100777571	Not Available	1510	Open in IMG/M
3300031708\|Ga0310686_100913399	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1604	Open in IMG/M
3300031708\|Ga0310686_105738171	Not Available	531	Open in IMG/M
3300031708\|Ga0310686_114833443	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	24948	Open in IMG/M
3300032515\|Ga0348332_11029363	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp.	972	Open in IMG/M
3300032515\|Ga0348332_14018689	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300032515\|Ga0348332_14092474	Not Available	532	Open in IMG/M
3300032756\|Ga0315742_12857785	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300033402\|Ga0326728_10599919	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300033818\|Ga0334804_033940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1607	Open in IMG/M
3300033818\|Ga0334804_048750	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp.	1240	Open in IMG/M
3300034065\|Ga0334827_028798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2217	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.56%
Aquatic	Environmental → Aquatic	18.52%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	46.30%
Soil	Environmental → Terrestrial → Soil	31.48%
Freshwater	Environmental → Aquatic → Freshwater	18.52%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.78%
Peat Moss	Host-Associated → Plants → Peat Moss	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	46.30%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	11.11%
Loam	Environmental → Terrestrial → Soil → Loam	6.48%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	46.30%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	13.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.70%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	25.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.89%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	10.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	9.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.48%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.70%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.78%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.85%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.93%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.93%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300028552	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028860	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029920	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_3	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030046	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1000383196	3300004092	Bog Forest Soil	MDFSRKLCLSLFSAALATSVLTTGCQPAQEQAAPAQPAATQPVQDETVIYNKWEVETHREHKDIAQRPAAEQKEYHDWRAQHPDHK*
Ga0070761_101098372	3300005591	Soil	MPSRKLFSCFLGAVLATSVFTTGCQPAQNSAQPAQTVAQPVQDETVIYNKWEVETHRAHKDINQRPAEEQKEYQDWRQKHP*
Ga0070761_105278072	3300005591	Soil	MPLRKIQLCLLGAALATSVLTTGCQPQTNSGQNTSQPAPNETVIYNRWEVETNRPHKDIKQRPPEEQKEYHDWRQKQP
Ga0070762_112694343	3300005602	Soil	MSLRKFQLCLLGAAVATSMLTTGCQPQSNSGQTTTQPATDETVIYNKWEVQTNRPHKDLSQRPPEEQKEYHDWRQKQ
Ga0070764_100600082	3300005712	Soil	MDFGRKLCLSLFGAALATSVLTTGCQPAPVEPAPAQPVAAQPVQDETVIYKKWEVETHREHKEIAQRPAAEQKEYHDWRAAHPDQH*
Ga0116117_11381372	3300009635	Peatland	MCLFGAALATSVMTTGCQPQSNSEQTTSQPAPSQPASNETVIYNKWEVETHRAHKDIKERPAEEQKEYNDWRQKHPDKR*
Ga0116227_114336382	3300009709	Host-Associated	MPILRKSCLCLLGAALATSVLTTGCQSSPPVQDETVIYNKWEVESHRPHKDINQRPPAEQKEYHDWRDKQPNHR*
Ga0150983_100218861	3300011120	Forest Soil	FCLAVIGAALATSVLTTGCQPAPVEPAPAQPVAAQPVQDETVIYKKWEVETHREHKEIAQRPAAEQKEYHDWRAAHPDAH*
Ga0181517_1000049631	3300014160	Bog	LGAALATCVLTTGCQPQSNAGQTSVQPAQDETVIYNKWEVETHRPHKDINQRPPEEQKEYHDWRQKNPNVR*
Ga0181534_103041972	3300014168	Bog	MSLRKLRLCLFATALATSVLATGCQSSQPAQTASQPAPNETVIYNKWEVETHRDHKEIEKRTVDEQREYRDWRAKHP*
Ga0181531_100691492	3300014169	Bog	MALKKLPLCLLGAALAASVLTTGCQPQADPVQTTTQPAPSQPATNETVIYNKWETETHRPHKEINQRTVDEQKEYNDWKQKQPDHH*
Ga0181531_108364682	3300014169	Bog	AVVTTGCQAAPPAETVSAQPAQPAQDETVIYNKWEVETHRAHKEINQRPPEEQKEYSDWRQKHPDNH*
Ga0181531_109021742	3300014169	Bog	MIGATLATSAVLTTGCQSAPPAETVTTQPAQPAQDETVIYNKWETETHRPHKEIAQRTPDEQKEYHDWRQKQPNAH*
Ga0181535_103649122	3300014199	Bog	LGAVLATSVLTTGCQSSQPAQTASQPAPNETVIYNKWEVETHRPHKEIAQRPPEEQKEYQDWRQKHPDNR*
Ga0182013_100146507	3300014492	Bog	MLLRTLSLCLFGATLATAVLTTGCQSAPQPQTVGTSQPAQPAQDETVIYNKWETETHRPHKEIAQRSAAEQKEYSDWRQKQPDKH*
Ga0182013_100164994	3300014492	Bog	MCLFGAAMAASVLTTGCQPASTSVQTTSQPTPSQPAPSQPASNETVVYNKWEAETHRAHKEINQRPPEEQKEYSDWRQKHPDSH*
Ga0182013_100201564	3300014492	Bog	MCLFGAALATSVLTTGCQPQSNSEQTTSQPAPSQPASNETVIYNKWEVETHRAHKDIKERPAEEQKEYNDWRQKHPDKR*
Ga0182013_100676614	3300014492	Bog	LGAALATSVLTTGCQPAQPAQTAAQPAQPAQDETVVYNKWEVETHRDHKDVNQRPPAEQKEYHDWRQKQPDHH*
Ga0182016_100120893	3300014493	Bog	MPLRKLCSCLLGAALATCVLTTGCQPQSNSGQTSAQPAPNETVIYNKWEVATNRPHKDLAQRPQAEQKEYQDWRQKNPNVH*
Ga0182016_100165842	3300014493	Bog	MLLRTLSLCLFGATLATAVLTTGCQSAPQPQTVGTSQPAQPAQDETVIYNKWETETHRPHKEIAQRPAAEQKEYSDWRQKQPDKH*
Ga0182016_100615165	3300014493	Bog	MLVRKSCLCFFAALLATSVLTTGCQPAQNSSQPVQPVAQPAPNETVIYNKWEVETHRDHKEINQRTADEQKEYRDWRGKHPDNH*
Ga0182016_102690902	3300014493	Bog	MKGKSMPLLRKSCLCLLGAVLAASVLTTGCQSAQPAQTASQPAPNETVIYNKWEVETHRPHKEIAQRPPEEQKEYHDWRQQH
Ga0182015_110201302	3300014495	Palsa	MTLRNLSSCLLGAALATCVLTTGCQPQSNSGQSSVQPAQDETVIYNKWEVETHRPHKDLNQRPPAEQQEYHDWRQKNPNVR*
Ga0182012_100807793	3300014499	Bog	MCLFGAAMAASVLTTGCQPASTSVQTTSQPAPSQPAPSQPASNETVVYNKWEAETHRAHKEINQRPPEEQKEYSDWRQKHPDSH*
Ga0182012_104456621	3300014499	Bog	MLLRKLHLCLLGATLATAAFTTGCQSAPPAETVSTQPAQPAQDETVIYNKWETETKRPHKEIAQRTPDEQKEYHDWRQKQPNVH*
Ga0182024_1000110619	3300014501	Permafrost	LGAALAISVLATGCRSHDNDRHDNSQPAQNDAQPAQNETVIYNKWEVETHRDHKDINQRPPEEQKEYRDWRQKRPDNH*
Ga0182024_100486323	3300014501	Permafrost	MPLSKLRLCFCAAALATSVLTIGCQPQADSVSQPATSQPAPNETVISNKWEVETHRDHKDINQRPQAEQKEYNDWRQKQSDRH*
Ga0182024_100513671	3300014501	Permafrost	SVLTTGCQPAQESAAPAPAAAQPAQNETVIYNRWEVETHRAHKEIAQRPPAEQKEYSDWRQKQPDKH*
Ga0181516_100070042	3300014655	Bog	MLSRKIYSCLLGAALATSILSIGCQSGQPAQTVTQPAPDETVIYNKWEVETHRAHKDISQRPPEEQKEYHDWRQKNPNAH*
Ga0181516_104091322	3300014655	Bog	MIGATLATSAVLTTGCQSAPPAETVTTQPAQPAQDETVIYNKWETETHRPHKEIAQRTPDEQKEYHDWRQKQPN
Ga0187877_12155162	3300017931	Peatland	MSLRKFCLCLLGAALATFVLTTGCQSSQPAQPAQTASQPAQDETVIYNKWEAETHRPHKEIKQRPPEEQK
Ga0187879_102765252	3300017946	Peatland	MPLRNLRMCLFGAALATSVLTTGCQPQSNSEQTTSQPAPSQPASNETVIYNKWEVETHRAHKDIKERPAEEQKEYNDWRQK
Ga0187847_100367093	3300017948	Peatland	MPFRKSCLCLLGAALAASVLTTGCQSSPPAQNETVIYNKWEAETHRPHKEIKERPPEEQKEYNDWRQKQPDHH
Ga0187847_104377972	3300017948	Peatland	MPLRNLRMCLFGAALATSVMTTGCQPQSNSEQTTSQPAPSQPASNETVIYNKWEVETHRAHKDIKERPAEEQKEYNDWRQKHPDHH
Ga0181520_1000126414	3300017988	Bog	MASRKLCSCLLGAALATCVLTTGCQPQSNAGQTSVQPAQDETVIYNKWEVETHRPHKDINQRPPEEQKEYHDWRQKNPNVR
Ga0181520_107812711	3300017988	Bog	MPLRKLCSCLLGAALATCVLTTGCQPQSNSGQTSAQPAPNETVIYNKWEVATNRPHKDLAQRPQAEQKEYQD
Ga0187855_100469161	3300018038	Peatland	LCLLGAALAASVLTTGCQSSPPAQNETVIYNKWEAETHRPHKEIKERPPEEQKEYNDWRQKQPDHH
Ga0187871_100342121	3300018042	Peatland	MTLRNLSSCLLGAALATCVLTTGCQPQSNSGQSSVQPAQDETVIYNKWEVETHRPHKDLNQRPPAEQQEYHDWRQKNPNVR
Ga0187887_104053042	3300018043	Peatland	MPLSKLRLCFFAATLATCVLTTGCQPQPTAVQTNSQPAQDETVVYNKWEAETHRDHKEMNQRPPAEQKEYHDWRQKQPDHH
Ga0181514_12380622	3300019268	Peatland	MALKKLPLCLLGAALAASVLTTGCQPQADPVQTTTQPAPSQPATNETVIYNKWETETHRPHKEINQRTVDEQKEYNDWKQKQPDHH
Ga0182031_13240172	3300019787	Bog	MPLRNLRMCLFGAALATSVLTTGCQPQSNSEQTTSQPAPSQPASNETVIYNKWEVETHRAHKDIKERPAEEQKEYNDWRQKHPDKR
Ga0210396_112300312	3300021180	Soil	MLLRKLHSCLFGAALASAVLTTGCQPQASSAPSTTEPAQSETVIYNKWEVETHRPHKEINQRPPEDQKAYHDWRQAHPEIR
Ga0210385_100014494	3300021402	Soil	MLLRKLHLCLFGATLASAVLTTGCQPPATSAPSATEPAQSETVIYNKWEVETHRPHKEINQRPPEEQKAYHDWRQAHPEIR
Ga0210387_117630801	3300021405	Soil	MPFLRKSCLCLLGAALATSVLTIGCQSSQPAPDETVIYNKWEVETHRPHKDIVQRPREEQKEYHDWREKQPHAR
Ga0210391_102924303	3300021433	Soil	MDFGRKLCLSLFGAALATSVLTTGCQPAPVEPAPAQPVAAQPVQDETVIYKKWEVETHREHKEIAQRPAAEQKEYHDWRAAHPDQH
Ga0210391_113463121	3300021433	Soil	MPFLRKSCLCLKSCLLGAALAASVLTTGCQSSQPAQDETVIYNKWEVETHRPHKDIAQRPPAEQKEYHDWRDKQPRPR
Ga0210392_104156892	3300021475	Soil	MPFLRKSCLCLLGAALATSVLTTGCQSSQPAPDETVIYNKWEVETHRPHKDIVQRPPEEQKEYHDWREKQPHA
Ga0242678_10570541	3300022715	Soil	CLCLKSCLLGAALAASVLTTGCQSSQPAQDETVIYNKWEVETHRPHKDIAQRPPAEQKEYHDWRDKQPRPR
Ga0224526_10025203	3300022872	Soil	MPFVRKSCLCLLGAALATSVLTTGCQPAQPAQTAAQPAQPAQDETVVYNKWEVETHRDHKDVNQRPPAEQKEYHDWRQKQPDHH
Ga0209221_11656772	3300027609	Forest Soil	MPFLRKSCLCLLGAVLATSVLTTGCQSSQPAQDETVIYNKWEVETHRPHKDIIQRPPAEQKEYHDWRQRQPHPR
Ga0209274_100804842	3300027853	Soil	MPSRKLFSCFLGAVLATSVFTTGCQPAQNSAQPAQTVAQPVQDETVIYNKWEVETHRAHKDINQRPAEEQKEYQDWRQKHP
Ga0302149_11278562	3300028552	Bog	MLVRKSCLCFFAALLATSVLTTGCQPAQNSSQPVQPVAQPAPNETVIYNKWEVETHRDHKEINQRTADEQKEYRDWRWKHPDNH
Ga0302144_100037783	3300028560	Bog	MPIRNLRMCLFGAAMAASVLTTGCQPASTSVQTTSQPAPSQPAPSQPASNETVVYNKWEAETHRAHKEINQRPPEEQKEYSDWRQKHPDSH
Ga0302144_100520541	3300028560	Bog	LSVCLFGATLATAVLTTGCQSAPQPQTVGTSQPAQPAQDETVIYNKWETETHRPHKEIAQRSAAEQKEYSDWRQKQPDKH
Ga0302144_102424271	3300028560	Bog	MLVRKSCLCFFAALLATSVLTTGCQPAQNSSQPVQPVAQPAPNETVIYNKWEVETHRDHKEINQRTADEQKEYRDWRGKHPDNH
Ga0302147_100431581	3300028566	Bog	MPLLRKSCLCLLGAVLATSVLTTGCQSSQPAQTASQPAPNETVIYNKWEVETHRPHKEIAQRPPEEQKEYHDWRQQHPDNR
Ga0302153_100113344	3300028574	Bog	MLLGTLSLCLFGATLATAVLTTGCQSAPQPQTVGTSQPAQPAQDETVIYNKWETETHRPHKEIAQRSAAEQKEYSDWRQKQPDKH
Ga0302153_102675582	3300028574	Bog	MPIRNLRMCLFGAAMAASVLTTGCQPASTSVQTTSQPAPSQPAPSQPASNETVVYNKWEAETHRAHKEINQRPPEE
Ga0302267_100960342	3300028745	Bog	MLLRKLHLCLLGATLATAAFTTGCQSAPPAETVSTQPAQPAQDETVIYNKWETETKRPHKEIAQRTPDEQKEYHDWRQKQPNVH
Ga0302267_104508641	3300028745	Bog	MPIRNLRMCLFGAAMAASVLTTGCQPASTSVQTTSQPTPSQPAPSQPASNETVVYNKWEAETHRAHKEINQRPPEEQKEYSDWRQ
Ga0302156_100073256	3300028748	Bog	MLLRTLSLCLFGATLATAVLTTGCQSAPQPQTVGTSQPAQPAQDETVIYNKWETETHRPHKEIAQRSAAEQKEYSDWRQKQPDKH
Ga0302224_103534582	3300028759	Palsa	MPFLRKSCLCLLGAALAASVLTTGCQSSQPAQTASQPAPDETVIYNKWEVETHRPHKEIAQRPPAEQKEYHDWRDRQPRPR
Ga0302198_100911671	3300028765	Bog	MPLLRKSCLCLLGAVLATSVLTTGCQSSQPAQTASQPAPNETVIYNKWETETHRPHKEIAQRPPEEQKEYHDWRQQHPDHH
Ga0302266_102539731	3300028779	Bog	MPIRNLRMCLFGAAMAASVLTTGCQPASTSVQTTSQPTPSQPAPSQPASNETVVYNKWEAETHRAHKEINQRPPEEQKEYSDWRQKHPDSH
Ga0302189_100061178	3300028788	Bog	MLLRKLSLCLFGATLATAVLTTGCQSAPQPQTVGTSQPAQPAQDETVIYNKWETETHRPHKEIAQRSAAEQKEYSDWRQKQPDKH
Ga0302199_10078665	3300028860	Bog	SMLLGTLSLCLFGATLATAVLTTGCQSAPQPQTVGTSQPAQPAQDETVIYNKWETETHRPHKEIAQRSAAEQKEYSDWRQKQPDKH
Ga0302278_101286544	3300028866	Bog	MLLRKLHLCLLGAALATSVFTAGCQSSQPAQPAQTASQPAQDETVIYNKWEVETHRPHKDINQRPAEEQKEYHDWRQAHPDHR
Ga0302155_100934452	3300028874	Bog	MPIRNLRMCLFGAAMAASVLTTGCQPESTSVQTTSQPAPSQPAPSQPASNETVVYNKWEAETHRAHKEINQRPPEEQKEYSDWRQKHPDSH
Ga0311341_104316981	3300029908	Bog	MLLRKLHLCLLGATLATAAFTTGCQSAPPAETVSTQPAQPAQDETVIYNKWETETKRPHKEIAQRTPDEQK
Ga0311361_105487362	3300029911	Bog	TLSLCLFGATLATAVLTTGCQSAPQPQTVGTSQPAQPAQDETVIYNKWETETHRPHKEIAQRSAAEQKEYSDWRQKQPDKH
Ga0311362_111829711	3300029913	Bog	MFLKKFQLCLFGAAMATTVLTTGCQPAPQTEVTTQPAQPAQDETVIYNKWETETHRPHKEIAQRPPDEQKEYHDWRQKQPNVH
Ga0311359_102926761	3300029914	Bog	LHLCLLGATLATAAFTTGCQSAPPAETVSTQPAQPAQDETVIYNKWETETKRPHKEIAQRTPDEQKEYHDWRQKQPNVH
Ga0302142_11504241	3300029920	Bog	MLLRTLSLCLFGATLATAVLTTGCQSAPQPQTVGTSQPAQPAQDETVIYNKWETETHRPHKEIAQRSAAEQKEYSDWRQKQPD
Ga0311352_110609401	3300029944	Palsa	MPSRKFSSYFLGVALAASLFTTGCQPQPQTDSGQSTSQPAPNETVIYNKWEVETHRPHKEIAQRPPEE
Ga0311371_101052012	3300029951	Palsa	MPFLRKSCLCLLGAALAASFLTTGCQSSQPAQTASQPAPDETVIYNKWEVETHRPHKEIAQRPPAEQKEYHDWRDRQPRPR
Ga0311371_116189642	3300029951	Palsa	MPSRKFSSYFLGVALAASLFTTGCQPQPQTDSGQSTSQPAPNETVIYNKWEVETHRPHKEIAQRPPEEQKEYNDWRHAHPDLR
Ga0311342_111088531	3300029955	Bog	LRMCLFGAALATSVLTTGCQPQSNSEQTTSQPAPSQPASNETVIYNKWEVETHRAHKDIKERPAEEQKEYNDWRQKHPDKR
Ga0302277_11080471	3300029982	Bog	MPIRNLRMCLFGAAMAASVLTTGCQPASTSVQTTSQPAPSQPAPSQPASNETVVYNKWEAETHRAHKEINQRPPEEQKEYSDWRQKH
Ga0302188_101831762	3300029986	Bog	LATSVLTTGCQSSQPAQTASQPAPNETVIYNKWEVETHRPHKEIAQRPPEEQKEYHDWRQQHPDNR
Ga0302190_104262951	3300029988	Bog	RTKGKSMLVRKSCLCFFAALLATSVLTTGCQPAQNSSQPVQPVAQPAPNETVIYNKWEVETHRDHKEINQRTADEQKEYRDWRGKHPDNH
Ga0311338_114543872	3300030007	Palsa	CQSSQPAETVSQPAQAASQPVQDETVIYNKWEADTHRPHKEIAQRPPAEQKEYHDWRDKQPRAR
Ga0302281_100388351	3300030044	Fen	MLVRKSCLCFFAALLATSVLTTGCQPAQNSSQPVQPVAQPAPNETVIYNKWEVETHRDHKEINQRTADEQKEYRDWRG
Ga0302282_10935504	3300030045	Fen	SCLCLLGAVLATSVLTTGCQSSQPAQTASQPAPNETVIYNKWEVETHRPHKEIAQRPPEEQKEYHDWRQQHPDNR
Ga0302305_12932931	3300030046	Palsa	MPLLRKSCLCLLGAALAASFLTTGCQSSQPAQTASQPAPDETVIYNKWEVETHRPHKEIAQRPPAEQKEYH
Ga0311370_123521101	3300030503	Palsa	MPILRNSCLCLLGAALAASVLTTGCQSSQPAETVSQPAQAASQPVQDETVIYNKWEADTHRPHKEIAQRPPAEQKEYHDWRDKQPRAR
Ga0302194_100343397	3300030506	Bog	MPLLRKSCLCLLGAVLATSVLTTGCQSSQPAQTASQPAPNETVIYNKWEVETHRDHKEIAQRPPAEQKEYQDWRQKQPDHH
Ga0302193_103072403	3300030519	Bog	GAVLATSVLTTGCQSSQPAQTASQPAPNETVIYNKWEVETHRPHKEIAQRPPEEQKEYHDWRQQHPDNR
Ga0311372_112956992	3300030520	Palsa	MPFLRKSCLCLLGAALAASVLTTGCQSSQPAETVSQPAQTASQPAQDETVIYNKWEVETHRPHKDIVQRPPAEQKEYHDWRDKQPRAR
Ga0311354_101178393	3300030618	Palsa	LCLLGAALAASVLTTGCQSSQPAETVSQPAQTASQPAQDETVIYNKWEVETHRPHKDIVQRPPAEQKEYHDWRDKQPRAR
Ga0311345_103886392	3300030688	Bog	LATSVFTAGCQSSQPAQPAQTASQPAQDETVIYNKWEVETHRPHKDINQRPAEEQKEYHDWRQAHPDHR
Ga0302314_102341433	3300030906	Palsa	MPFLRKSCLCLLGAALAASVLTTGCQSSQPAETVSQPAQAASQPVQDETVIYNKWEADTHRPHKEIAQRPPAEQKEYHDWRDKQPRAR
Ga0302308_106796671	3300031027	Palsa	MPFLRNSCLCLLGAALAASVLTTGCQSSQPAETVSQPAQAASQPVQDETVIYNKWEADTHRPHKEIAQRPPAEQKEYHDWRDKQPRAR
Ga0302325_101591542	3300031234	Palsa	MPLLRKSCLCLLGAALAASFLTTGCQSSQPAQTASQPAPDETVIYNKWEVETHRPHKEIAQRPPAEQKEYHDWRDRQPRPR
Ga0302325_124796221	3300031234	Palsa	CLLGAALAASVLTTGCQSSQPAETVSQPAQAASQPVQDETVIYNKWEVETHRPHKEIVQRPPAEQKEYHDWRDRQPRAR
Ga0302324_1017939262	3300031236	Palsa	MPFLRNSCLCLLGAALATSVLTTGCQSSQPAETVSQPAQAASQPVQDETVIYNKWEADTHRPHKEIAQRPPAEQKEYHDWRDKQPRAR
Ga0302326_102014331	3300031525	Palsa	LCLLGAALATSVLTTGCQSSQPAETVSQPAQAASQPVQDETVIYNKWEADTHRPHKEIAQRPPAEQKEYHDWRDKQPRAR
Ga0310686_1007775713	3300031708	Soil	MDVRRKFCLAVIGAALTSSVLTTGCQPAPVEPAPAQPAAAQPVQDETVIYKKWEVETHREHKEIAQRPAAEQKEYHDWRAAHPDAH
Ga0310686_1009133992	3300031708	Soil	MPLSKIRLCLLGAVVATSMLTTGCQPQTSSAPTTTQPATDETVIYNKWEVQTNRPHKDLSQRPPDEQKEYHDWRQKQPDAH
Ga0310686_1057381711	3300031708	Soil	LCLLGAALATSVLTTGCQSSQPAQTATTSQPAPDETVIYNKWEVETHRPHKEIVQRPPAEQKEYHDWRQKQPNPR
Ga0310686_1148334435	3300031708	Soil	MEFRRKFCLSLIGVALAAPVLTTGCQPAPVEQAPAQPAAAQPVQDETVIYNKWEVETHREHKEIAQRPAAEQKEYHDWRAQHPDHR
Ga0348332_110293633	3300032515	Plant Litter	MPLKKLQLCLLGAALATSVVTIGCQPQTNSSQPAPNETVIYNKWEVDTHRAHKEINQRPPEEQKEYHDWRQKQPDNH
Ga0348332_140186892	3300032515	Plant Litter	MPFLRKSCFCLLSAALVTSVLTTGCQSSQPAQTVSQPAPNETVIYNKWEVDTHRPHKEIAQRPPAEQKEYHDWRQRQPNSR
Ga0348332_140924741	3300032515	Plant Litter	TKGNSMPLRKLCLCFLGAALATSVLTTGCQPAQNNAQPAPNETVIYNKWEVETHRDHKDLNQRPPEEQKEYGDWRQKHPEIH
Ga0315742_128577851	3300032756	Forest Soil	MPFLRNSCLCLLGAALATSVLTTGCQSSQPAETVSQPAQAASQPVQDETVIYNKWEVETHRPHKEIVQRPPAEQKEYHDWRQKQPNPR
Ga0326728_105999191	3300033402	Peat Soil	MPFLRKSCLCLLGAALATSVLTIGCQSSQPAQDETVIYNKWEAETHRAHKDIHQRPPEEQKEYQDYRQQHPNNR
Ga0334804_033940_1024_1248	3300033818	Soil	LLGAALATSVLTTGCQPAQPAQTAAQPAQPAQDETVVYNKWEVETHRDHKDVNQRPPAEQKEYHDWRQKQPDHH
Ga0334804_048750_204_443	3300033818	Soil	MCLFGAALATSVLTTGCQPQSNSEQTTSQPAPSQPASNETVIYNKWEVETHRAHKDIKERPAEEQKEYNDWRQKHPDKR
Ga0334827_028798_1155_1412	3300034065	Soil	MLLRTLSLCLFGATLATAVLTTGCQSAPQPQTVGTSQPAQPAQDETVIYNKWETETHRPHKEIAQRPAAEQKEYSDWRQKQPDKH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089692

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences