Metagenome Family F089739

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F089739
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	130 residues
Representative Sequence	ALSLITPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVQLDGIKLTMDLAFVAVYKASKGAATSIDIVRCGPVR
Number of Associated Samples	79
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	23.15 %
% of genes near scaffold ends (potentially truncated)	46.30 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (70.370 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (20.370 % of family members)
Environment Ontology (ENVO)	Unclassified (41.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.259 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.92% β-sheet: 28.48% Coil/Unstructured: 59.60%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
d.104.1.0: automated matches	d6hcwa2	6hcw	0.63349
d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain	d4hwsa1	4hws	0.63261
d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain	d1yfsa2	1yfs	0.63117
d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain	d1atia2	1ati	0.63057
d.104.1.1: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain	d3p8ta_	3p8t	0.6265

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00106	adh_short	9.26
PF13561	adh_short_C2	4.63
PF00892	EamA	2.78
PF04828	GFA	2.78
PF13844	Glyco_transf_41	1.85
PF08238	Sel1	0.93
PF00989	PAS	0.93
PF00206	Lyase_1	0.93
PF01436	NHL	0.93
PF03795	YCII	0.93
PF01979	Amidohydro_1	0.93
PF00583	Acetyltransf_1	0.93
PF13376	OmdA	0.93
PF12680	SnoaL_2	0.93
PF11137	DUF2909	0.93
PF06071	YchF-GTPase_C	0.93
PF01828	Peptidase_A4	0.93
PF02698	DUF218	0.93
PF15780	ASH	0.93
PF04072	LCM	0.93
PF08327	AHSA1	0.93
PF00005	ABC_tran	0.93
PF10994	DUF2817	0.93
PF02522	Antibiotic_NAT	0.93
PF14106	DUF4279	0.93
PF00067	p450	0.93
PF00248	Aldo_ket_red	0.93
PF12483	GIDE	0.93
PF01381	HTH_3	0.93
PF13452	MaoC_dehydrat_N	0.93
PF01261	AP_endonuc_2	0.93
PF02452	PemK_toxin	0.93
PF00990	GGDEF	0.93
PF01799	Fer2_2	0.93
PF02518	HATPase_c	0.93
PF00487	FA_desaturase	0.93
PF00881	Nitroreductase	0.93
PF06108	DUF952	0.93
PF13676	TIR_2	0.93
PF13688	Reprolysin_5	0.93
PF07690	MFS_1	0.93
PF00132	Hexapep	0.93
PF00015	MCPsignal	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3791	Uncharacterized conserved protein	Function unknown [S]	2.78
COG0840	Methyl-accepting chemotaxis protein (MCP)	Signal transduction mechanisms [T]	1.85
COG0012	Ribosome-binding ATPase YchF, GTP1/OBG family	Translation, ribosomal structure and biogenesis [J]	0.93
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.93
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	0.93
COG2124	Cytochrome P450	Defense mechanisms [V]	0.93
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.93
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93
COG2746	Aminoglycoside N3'-acetyltransferase	Defense mechanisms [V]	0.93
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	0.93
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.93
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93
COG3502	Uncharacterized conserved protein, DUF952 family	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.37 %
Unclassified	root	N/A	29.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.37 %
Unclassified	root	N/A	29.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.37 %
Unclassified	root	N/A	29.63 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.11 %
Unclassified	root	N/A	29.63 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.63 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.63 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.85 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.70 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.78 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.78 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	2.78 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.85 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.93 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.63 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	2.78 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	2.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.85 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1.85 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.63 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	1.85 %
Starkeya	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya	1.85 %
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	0.93 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.93 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	0.93 %
Pseudoxanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas	0.93 %
Ancylobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Ancylobacter	0.93 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.63 %
unclassified Lysobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter	1.85 %
unclassified Starkeya	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → unclassified Starkeya	1.85 %
unclassified Ancylobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Ancylobacter → unclassified Ancylobacter	0.93 %
Granulicella tundricola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	0.93 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.93 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.93 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	0.93 %
Pseudoxanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.63 %
Lysobacter sp. A03	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter → Lysobacter sp. A03	1.85 %
Starkeya sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → unclassified Starkeya → Starkeya sp.	1.85 %
Granulicella tundricola MP5ACTX9	strain	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola → Granulicella tundricola MP5ACTX9	0.93 %
Ancylobacter sp. FA202	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Ancylobacter → unclassified Ancylobacter → Ancylobacter sp. FA202	0.93 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.93 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.93 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	0.93 %
Pseudoxanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100232470	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300003505\|JGIcombinedJ51221_10182183	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300004082\|Ga0062384_100056007	All Organisms → cellular organisms → Bacteria	1934	Open in IMG/M
3300004082\|Ga0062384_100069889	All Organisms → cellular organisms → Bacteria → Proteobacteria	1778	Open in IMG/M
3300004082\|Ga0062384_101216991	Not Available	548	Open in IMG/M
3300004092\|Ga0062389_100065075	All Organisms → cellular organisms → Bacteria → Proteobacteria	3017	Open in IMG/M
3300004092\|Ga0062389_101101462	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300004092\|Ga0062389_102838964	Not Available	647	Open in IMG/M
3300004092\|Ga0062389_104382351	Not Available	531	Open in IMG/M
3300005591\|Ga0070761_10138651	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300005610\|Ga0070763_10449175	All Organisms → cellular organisms → Bacteria → Proteobacteria	731	Open in IMG/M
3300005712\|Ga0070764_10012634	All Organisms → cellular organisms → Bacteria → Proteobacteria	4153	Open in IMG/M
3300005921\|Ga0070766_10138853	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300005993\|Ga0080027_10104588	Not Available	1063	Open in IMG/M
3300005994\|Ga0066789_10246183	Not Available	750	Open in IMG/M
3300009500\|Ga0116229_10099771	All Organisms → cellular organisms → Bacteria	2623	Open in IMG/M
3300009500\|Ga0116229_10493079	Not Available	1015	Open in IMG/M
3300009500\|Ga0116229_10578346	Not Available	925	Open in IMG/M
3300009500\|Ga0116229_11384893	Not Available	558	Open in IMG/M
3300009510\|Ga0116230_10006271	All Organisms → cellular organisms → Bacteria → Proteobacteria	11726	Open in IMG/M
3300009510\|Ga0116230_10009567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9557	Open in IMG/M
3300009510\|Ga0116230_10064421	All Organisms → cellular organisms → Bacteria → Proteobacteria	3279	Open in IMG/M
3300009510\|Ga0116230_10843549	Not Available	678	Open in IMG/M
3300009697\|Ga0116231_10009561	All Organisms → cellular organisms → Bacteria	16240	Open in IMG/M
3300009697\|Ga0116231_10018758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	7898	Open in IMG/M
3300009697\|Ga0116231_10189374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1175	Open in IMG/M
3300009701\|Ga0116228_10080169	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2483	Open in IMG/M
3300009709\|Ga0116227_10043607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	4284	Open in IMG/M
3300009709\|Ga0116227_10102639	Not Available	2322	Open in IMG/M
3300009787\|Ga0116226_10011939	All Organisms → cellular organisms → Bacteria → Proteobacteria	8035	Open in IMG/M
3300014168\|Ga0181534_10001159	All Organisms → cellular organisms → Bacteria → Proteobacteria	17511	Open in IMG/M
3300014169\|Ga0181531_10406806	Not Available	837	Open in IMG/M
3300014201\|Ga0181537_10317868	All Organisms → cellular organisms → Bacteria → Proteobacteria	1069	Open in IMG/M
3300014201\|Ga0181537_10986518	Not Available	570	Open in IMG/M
3300014495\|Ga0182015_10121103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1798	Open in IMG/M
3300014501\|Ga0182024_11391674	Not Available	808	Open in IMG/M
3300014654\|Ga0181525_10204214	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300014657\|Ga0181522_11017505	Not Available	514	Open in IMG/M
3300015206\|Ga0167644_1002838	All Organisms → cellular organisms → Bacteria → Proteobacteria	10714	Open in IMG/M
3300017948\|Ga0187847_10150109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1274	Open in IMG/M
3300018035\|Ga0187875_10001828	All Organisms → cellular organisms → Bacteria	16102	Open in IMG/M
3300018038\|Ga0187855_10639772	Not Available	619	Open in IMG/M
3300020579\|Ga0210407_10102050	All Organisms → cellular organisms → Bacteria	2180	Open in IMG/M
3300020582\|Ga0210395_10127770	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300021170\|Ga0210400_10003880	All Organisms → cellular organisms → Bacteria	13105	Open in IMG/M
3300021170\|Ga0210400_11053434	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300021181\|Ga0210388_10567890	All Organisms → cellular organisms → Bacteria → Proteobacteria	993	Open in IMG/M
3300021401\|Ga0210393_10303184	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300021402\|Ga0210385_10051001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2762	Open in IMG/M
3300021405\|Ga0210387_10186598	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300021405\|Ga0210387_10290976	Not Available	1436	Open in IMG/M
3300021406\|Ga0210386_10359023	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300021420\|Ga0210394_11791370	Not Available	512	Open in IMG/M
3300021433\|Ga0210391_11062209	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300021474\|Ga0210390_10151602	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300021474\|Ga0210390_10574483	All Organisms → cellular organisms → Bacteria → Proteobacteria	947	Open in IMG/M
3300021479\|Ga0210410_11168074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	661	Open in IMG/M
3300026281\|Ga0209863_10175195	Not Available	624	Open in IMG/M
3300027110\|Ga0208488_1041875	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300027692\|Ga0209530_1130544	Not Available	707	Open in IMG/M
3300027767\|Ga0209655_10117090	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300027807\|Ga0209208_10009937	All Organisms → cellular organisms → Bacteria → Proteobacteria	12442	Open in IMG/M
3300027853\|Ga0209274_10118938	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300027860\|Ga0209611_10059784	All Organisms → cellular organisms → Bacteria	2903	Open in IMG/M
3300027867\|Ga0209167_10587081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas	610	Open in IMG/M
3300027879\|Ga0209169_10015490	All Organisms → cellular organisms → Bacteria → Proteobacteria	4165	Open in IMG/M
3300027884\|Ga0209275_10593338	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola → Granulicella tundricola MP5ACTX9	635	Open in IMG/M
3300027889\|Ga0209380_10167993	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300027895\|Ga0209624_10254448	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300027908\|Ga0209006_10007867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9622	Open in IMG/M
3300027908\|Ga0209006_10186254	All Organisms → cellular organisms → Bacteria	1809	Open in IMG/M
3300027908\|Ga0209006_10512578	Not Available	999	Open in IMG/M
3300028747\|Ga0302219_10040619	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300028748\|Ga0302156_10282323	Not Available	750	Open in IMG/M
3300028759\|Ga0302224_10141538	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300028775\|Ga0302231_10342898	Not Available	628	Open in IMG/M
3300028781\|Ga0302223_10205950	Not Available	649	Open in IMG/M
3300028789\|Ga0302232_10191378	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300028906\|Ga0308309_10094556	All Organisms → cellular organisms → Bacteria → Proteobacteria	2296	Open in IMG/M
3300029882\|Ga0311368_10543328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	828	Open in IMG/M
3300029883\|Ga0311327_10464446	Not Available	783	Open in IMG/M
3300029907\|Ga0311329_10817255	Not Available	593	Open in IMG/M
3300029943\|Ga0311340_11211669	Not Available	607	Open in IMG/M
3300029944\|Ga0311352_10101176	All Organisms → cellular organisms → Bacteria → Proteobacteria	2539	Open in IMG/M
3300029951\|Ga0311371_11595734	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300029951\|Ga0311371_11599250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter → Lysobacter sp. A03	718	Open in IMG/M
3300030007\|Ga0311338_11432474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter → Lysobacter sp. A03	641	Open in IMG/M
3300030503\|Ga0311370_10963073	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300030520\|Ga0311372_10281143	All Organisms → cellular organisms → Bacteria	2654	Open in IMG/M
3300030520\|Ga0311372_10500305	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300030524\|Ga0311357_10073130	All Organisms → cellular organisms → Bacteria	3463	Open in IMG/M
3300030618\|Ga0311354_11224408	Not Available	678	Open in IMG/M
3300030618\|Ga0311354_11352012	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300030906\|Ga0302314_10807528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → unclassified Starkeya → Starkeya sp.	937	Open in IMG/M
3300031028\|Ga0302180_10089205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Ancylobacter → unclassified Ancylobacter → Ancylobacter sp. FA202	1782	Open in IMG/M
3300031234\|Ga0302325_10810393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1320	Open in IMG/M
3300031236\|Ga0302324_101800705	Not Available	778	Open in IMG/M
3300031236\|Ga0302324_101840909	All Organisms → cellular organisms → Bacteria → Proteobacteria	767	Open in IMG/M
3300031708\|Ga0310686_104579190	Not Available	866	Open in IMG/M
3300031708\|Ga0310686_106608393	All Organisms → cellular organisms → Bacteria	11891	Open in IMG/M
3300031708\|Ga0310686_107050503	All Organisms → cellular organisms → Bacteria → Proteobacteria	1260	Open in IMG/M
3300031708\|Ga0310686_110773226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → unclassified Starkeya → Starkeya sp.	880	Open in IMG/M
3300031708\|Ga0310686_113477863	Not Available	1169	Open in IMG/M
3300031715\|Ga0307476_10371899	Not Available	1054	Open in IMG/M
3300031715\|Ga0307476_10981107	Not Available	622	Open in IMG/M
3300031718\|Ga0307474_10348812	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300031788\|Ga0302319_10441766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1427	Open in IMG/M
3300031823\|Ga0307478_10376156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1173	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.26%
Host-Associated	Host-Associated	15.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.52%
Aquatic	Environmental → Aquatic	15.74%
Plants	Host-Associated → Plants	15.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.44%
Peat	Environmental → Terrestrial → Peat	24.07%
Freshwater	Environmental → Aquatic → Freshwater	15.74%
Peat Moss	Host-Associated → Plants → Peat Moss	15.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.07%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	24.07%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.74%
Loam	Environmental → Terrestrial → Soil → Loam	15.74%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	15.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	24.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.74%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	15.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.63%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	20.37%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	15.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.33%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.70%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.78%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009510	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009697	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027807	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG (SPAdes)	Host-Associated	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1002324702	3300002245	Forest Soil	MPADVHNPTGLPVYPNIDNARLDDRLRTDDLGRWCIRLSARSLDSLATVENWYRHALSTASETDLRNDGDYEKGYVELDGIKLTVNLAFVAVYKASKGAATSIDIVRCGASR*
JGIcombinedJ51221_101821832	3300003505	Forest Soil	VPLTHLRWGVAAVVYALSLVTPASLAVPAVVQNPTGLPIYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVELDGIKLTKDLAFVAVYKASKGAATSIDIVRCGPVR*
Ga0062384_1000560073	3300004082	Bog Forest Soil	VPLTHLRWGVAAVVYALSLITPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCIHLSARSSDALATVENWYRRALSTASETDLRNDGDYERSYVELDGIKLTMDLAFVAVYKASKGAATSIDIVRCGPGH*
Ga0062384_1000698893	3300004082	Bog Forest Soil	VAAVVCALSLMTSASLAMPADVRNPTGLPVYPNIDNARLDDRLRTDDFGRWCIRLSARSLDSLATVENWYRRALSTASETDLRNDGDYESSYMELDGIKLTMNLAFVAVYKASRGAATSIDIVRCGALR*
Ga0062384_1012169911	3300004082	Bog Forest Soil	NPTGLPVYPNIDNARLDDRLRTDDLGRWCIHLSARSLDSLTTVENWYRHTLSTASETDLSNDGDYERSYAQLDGIKLTMNLAFVAVYKASKGAATSIDIVRCGAFR*
Ga0062389_1000650752	3300004092	Bog Forest Soil	MAAVAYALCLMPRASLAMPADVHNPTGLPVYPNIDNARLDDRLRTDDLGRWCIHLSARSLDSLTTVENWYRHTLSTASETDLSNDGDYERSYAQLDGIKLTMNLAFVAVYKASKGAATSIDIVRCGAFR*
Ga0062389_1011014621	3300004092	Bog Forest Soil	VYALSLITPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCIHLSARSSDALATVENWYRRALSTASETDLRNDGDYERSYVELDGIKLTMDLAFVAVYKASKGAATSIDIVRCGPGH*
Ga0062389_1028389641	3300004092	Bog Forest Soil	MSFLLKPCAPLLLTHLRRGVAAVAYALPLMTGASLATPAEVHNPTGLPVYPNIDNARLDDRLRTDDLGRWCIRLSARSLDSLAAVESWYRHALSTASETDLRNDGDYESSHVELDGIKLTMNLAFVAVYKASRGAATSIDMVRCGSVR*
Ga0062389_1043823511	3300004092	Bog Forest Soil	RLETDVIPSQPYAPMPLTHFRWGLAAVVYALSLMTRASLAVPAVVQNPTGLPVYPNVDNARLEDRLRTDDLGRWCIHLSARSLDSLATVENWYRHALSTASETDLRNDGDYERSYVALDGIKLTTDLAFVAVYKASQGAATSIDIVRCGPVR*
Ga0070761_101386512	3300005591	Soil	DVIPSRPRGPVPLTHLKWGVAAVVYALSLITPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVELDGIKLTKDLAFVAVYKASKGAATSIDIVRCGPVR*
Ga0070763_104491752	3300005610	Soil	TPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVQLDGIKLTMDLAFVAVYKASKGAATSIDIVRCGPVR*
Ga0070764_100126344	3300005712	Soil	MVYALSLITPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVQLDGIKLTMDLAFVAVYKASKGAATSIDIVRCGPVR*
Ga0070766_101388531	3300005921	Soil	MPAVVDNPTGLPVYPNVDNARLDARLRTDDLGRWCTRLSARSLDSLATVEDWYRQALSSASETDLRNDRDYESSYLQLDGIKLTMNLAFVAVYKASKGAATSIDIVRCGPVR*
Ga0080027_101045882	3300005993	Prmafrost Soil	MTRASLAMPADVHNPTGLPVYPNIDNARLNDRLRTDDFGRWCIRLSARSLDSLETVENWYRHALSTASETDLRNDGDYESRFVELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGALR*
Ga0066789_102461831	3300005994	Soil	VPLTPLRWGVAAVVCAFSLMTRASLAMPADVHNPTGLPVYPNIDNARLDDRLRTDDFGRWCIRLSARSLDSLETVENWYRHALSTASETDLRNDGDYESRFVELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGALR*
Ga0116229_100997713	3300009500	Host-Associated	MVFLTHSRWAAAAAVYALSLMSRPSWAVPADANNPTGLPVYPNVDYSRLDDRWRTDDLGRWCIRLAARSSDSLVTVENWYRRALAPASETDLRNDGDYASNYAELDGVKLTMNLAFVAVYKASKGAATSIDIVRCGSIR*
Ga0116229_104930792	3300009500	Host-Associated	MAGASSAVAADLHNPTGLPVYPNTDYARLADRYTTDGLGRWCIRLSARSSDSLETVENWYRHALSTASETDLRNDGDYARSYSDLDGVKLTMNLAFVAIYKASKGAATSIDIDRCGVT*
Ga0116229_105783461	3300009500	Host-Associated	TGASRPQEFDLLVDLEPMSFLVSRGLVSLTRLTWGVAALLCASSLMTRASLAMSADVRNPTGLPVYPNIDNARLEDRLRTDDLGRWCIHLHARSLDSLGTVENWYRHALSTASETDLRHDGDYQSSFVELDGIKLTLNLAFVAVYQASKGAATSIDIVRCGVVR*
Ga0116229_113848931	3300009500	Host-Associated	ICSIGRLETDVVLFQPRVPVPLTHPSWGVAAGVYTLCLMAPASWAAPPDVHNPTGLPVYPNVDYARLDSRLRTDDLGRWCMRLSARSLDSLATIENWYRHALSAASETDLRNDGDYERVYVELDGIKLTVNLAFVAVYKASKGAATSIDIVSCEPGRK*
Ga0116230_100062714	3300009510	Host-Associated	LIDRSIKTDVANSDPRDPVQLTRFSWGAAVVIYAFALMNRAPFALAAVVANPTGLPVYPNVARTQLEDRLRTDDLGRWCMHFSAQSLDSLTSVEDWYRHALSTADETDLSHDRDYKSSYAAVEGIKLTMNLAFVAVYKASTGAATSIDIVRCGPLR*
Ga0116230_100095672	3300009510	Host-Associated	MSLNRLRWSATAICTLSLMSRASLAADVNNPTGLPIYPHVDHAQLEDRLRTDYLGRWCMHFSARSFDSLATVENWYRRTLSSASETDLGHDRDYQRSYAALDGIKLTMNLGFVAIYQASSGAVTSVDIVRCGPIG*
Ga0116230_100644214	3300009510	Host-Associated	VALKPRKWGVAAAVYALTLVCRASLATAADVNNPTGMPVYPNTDHAELEDRLRTDDLGRWCMHFSARSLDSLTTVENWYRHALSSGSETDLRNDRDYASSYVELDGIKLTMNLAFVAVYKASPGAATSIDIVRCGPAR*
Ga0116230_108435492	3300009510	Host-Associated	MAGTSSAMAADLHNPTGLPVYPNTDYARLADRYTTDGLGHWCIRLSARSSDSLETVENWYRHALSTASETDLRHDGDYERSYLELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGVT*
Ga0116231_100095616	3300009697	Host-Associated	VPLKPGKWGVAAAVYALTLVCRASLATAADVNNPTGMPVYPNTDHAQLEDRLRTDDLGRWCMHFSARSLDSLTTVENWYRHALSSGSETDLRNDRDYASSYVELDGIKLTMNLAFVAVYKASPGAATSIDIVRCGPAR*
Ga0116231_100187584	3300009697	Host-Associated	MAGASSAVAADLHNPTGLPVYPNTDYARLADRYTTDGLGRWCIRLSARSSDSLETVENWYRHALSTASETDLRNDGDYERSYLELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGTT*
Ga0116231_101893741	3300009697	Host-Associated	DRSIKTDVANSDPRDPVPLTRFSWGAAVVIYAFALMNRAPFALAAVVANPTGLPVYPNVARTQLEDRLRTDDLGRWCMHFSAQSLDSLTSVEDWYRHALSTADETDLSHDRDYKSSYAAVEGIKLTMNLAFVAVYKASTGAATSIDIVRCGPLR*
Ga0116228_100801691	3300009701	Host-Associated	KDVVGANPIDPMSLNRLRWSATAICTLSLMSRASLAADVNNPTGLPIYPHVDHAQLEDRLRTDYLGRWCMHFSARSFDSLATVENWYRRTLSSASETDLGHDRDYQRSYAALDGIKLTMNLGFVAIYRASSGALTSVDIVRCGPIG*
Ga0116227_100436071	3300009709	Host-Associated	MSFLVSRGLVPLTRLTWGVAALLCASSLMTRASLAMSADVRNPTGLPVYPNIDNARLEDRLRTDDLGRWCIHLHARSLDSLGTVENWYRHALSTASETDLRHDGDYQSSFVELDGIKLTLNLAFVAVYQASKGAATSIDIVRCGVVR*
Ga0116227_101026393	3300009709	Host-Associated	MSRPSWAVPADANNPTGLPVYPNVDYSRLDDRWRTDDLGRWCIRLAARSSDSLVTVENWYRRALAPASETDLRNDGDYASNYAELDGVKLTMNLAFVAVYKASKGAATSIDIVRCGSIR*
Ga0116226_100119395	3300009787	Host-Associated	VPLIHRRYRSAALLFALCLSTRASLTLEATVTNPTGLPVYPNVDNARLEDRLRTDDLGRWCMHLSARSFDSLATVESWYRRALPTASETELRKDRDYERSYGELDGIKLSMNLAFVAVYQVSTGAATSVDIVRCGPT*
Ga0181534_100011594	3300014168	Bog	MAILLNRTSPLTQLRWVAAMVCALSGAAHTSLAMPVDLYNPTGLPVYPNAHNARLEDRWRTDDFGRWCIHLSARSQDSLATVENWYRRALTSASETDLYHDADYERSYAALDGIKLTVNLAFVAVYKASKGADTSIEIVRCGSAR*
Ga0181531_104068061	3300014169	Bog	VPLTRLGWGVAAMIYALSLMTRASLAMPADLHNPTGLPVYPNVDNARLDDQLRTDDLGRWCMHLSARSLDSLVTVENWYRHALSTASETDLRNDGDYESSYVELDGIKLTVNLAFVAVYKTSKGAATSIDIVRCGSAR*
Ga0181537_103178681	3300014201	Bog	MSSRIWSIGRLESDGISSQPRVPVPLTRLKWGVAALVYALSVMTRASLAIPADVHNPTGLPVYPNVDNARLEDRLRTDDFGRWCIHLSARSANSLAAVEDWYRQALPGASETALRNDGDYARSYVELDGIKLTMNLAFVAVYKASKGAATSIDIVRC
Ga0181537_109865181	3300014201	Bog	MPANVQNPTGLPVYPNIDNARLDDRLRTDDLGRWCIRLSARSLDSLAAVENWYRLALSTASETDLRNDGDYESSYMGLDGIKLTMNLAFVAVYKASKGAATSIDIVRCGASGNRSSR*
Ga0182015_101211032	3300014495	Palsa	MTHASFATPADVHNPTGLPVYPNVDYARLEDRLRTDDFGRWCIRLSARSLDSLGAVENWYRHALSTASETDLSRDGDYKSSLELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGASR*
Ga0182024_113916741	3300014501	Permafrost	MARASTAMPADVHNPTGLPVYPNIDNARLDDRLRTDDLGRWCIRLSARSLDSLATVESWYRHALSTASNSDLRNDGDYESSYVELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGPVR*
Ga0181525_102042141	3300014654	Bog	MSSRIWSIGRLESDGISSQPRVPVPLTRLKWGVAALVYALSVMTRASLAIPADVHNPTGLPVYPNVDNARLEDRLRTDDFGRWCIHLSARSANSLAAVEDWYRQALPGASETALRNDGDYARSYVELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGPLR*
Ga0181522_110175051	3300014657	Bog	MPANVQNPTGLPVYPNVDNARLDDQLRTDDLGRWCMHLSARSLDSLVTVENWYRHALSTASETDLRNDGDYESSYVELDGIKLTVNLAFVAVYKTSKGAATSI
Ga0167644_10028388	3300015206	Glacier Forefield Soil	MAADVHNPTGLPVYPNIDNARLDDRLRTDDLGRWCIRLSARSLDSLATVENWYRHALSTASETDLLNDGDYEKSYVELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGASR*
Ga0187847_101501092	3300017948	Peatland	SLAMPVNVHNPTGLPVYPNIDYARLEDRLRTDDLGRWCIHLSARSLDSLATVENWYRHALLTASETDLSKDGDYQSSYVELDGIKLTMNLAFVAVYKASRGAATSIDIVRCGSGR
Ga0187875_100018289	3300018035	Peatland	VVCALSLMTRASLAVPADVHNPTGLPVYPNVDYARLEDRLRTDDFGRWCIRLSARSLDSLATVESWYRNALSFASETDLSKDGDYESSYVALDGIKLTMNLAFVAVYKASKGAATSIDIVRCGAVR
Ga0187855_106397721	3300018038	Peatland	DVHNPTGLPVYPNVDYARLEDRLRTDDFGRWCIRLSARSLDSLATVESWYRNALSFASETDLSKDGDYESSYVALDGIKLTMNLAFVAVYKASKGAATSIDIVRCGAVR
Ga0210407_101020503	3300020579	Soil	MPADVHNPTGLPVYPNIDNARLDDRLRTDDLGRWCIHLSARSLDSLATVENWYRHALATASETDLRNDGDYEKSYVELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGASR
Ga0210395_101277702	3300020582	Soil	VPLTHLRWGVAAVIYALSLVTPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVELDGIKLTKDLAFVAVYKASKGAATSIDIVRCGPVR
Ga0210400_100038808	3300021170	Soil	VVCALSLVTRASLAMPAAVYNPTGLPVYPNIDNARLDDRLRTDDLGRWCIRLSARSLDSLETVENWYRHALSTASETNLRNDGDYESSYVELDGIKLTMNLAFVAVYKASRGAATSIDIVRCGALR
Ga0210400_110534342	3300021170	Soil	ITPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVQLDGIKLTMDLAFVAVYKASKGAATSIDIVRCGPVR
Ga0210388_105678901	3300021181	Soil	VPLTHLRWGVAAVVYALSLITPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVQLDGIKLTMDLAFVAVYKASKGAATSIDIVRCGPVR
Ga0210393_103031843	3300021401	Soil	MVYALSLITPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVQLDGIKLTMDLAFVAVYKASKGAATSIDIVRCGPVR
Ga0210385_100510014	3300021402	Soil	VVYALSLVTPASLAVPAVVQNPTGLPIYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVQLDGIKLTMDLAFVAVYKASKGAATSIDIVRCGPVR
Ga0210387_101865981	3300021405	Soil	VVYALSLITPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVQLDGIKLTMDLAFVAVYKASKG
Ga0210387_102909762	3300021405	Soil	MSFLPSCGVQPLTRLRWNVAAVVYVLSLVTRGSIAMPAVVNNPTGLPVYPNIDNARLDDRLRTDDLGRWCVHLSARSLDSLATVENWYRHALSAASETDLRNDQDYERSYVQLDGIKLTMDLAFVAVYKASNGAATSIDIVRCGAIR
Ga0210386_103590231	3300021406	Soil	ALSLITPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVQLDGIKLTMDLAFVAVYKASKGAATSIDIVRCGPVR
Ga0210394_117913701	3300021420	Soil	LTPLRWGVTAVVCALSIIHASLAMPADVHNPTGLPVYPNIDNARLDDRLRTDDLGRWCIHLSARSLDSLATVENWYRHALATASETDLRNDGDYEKSYVELDGIKLTMNLAFVAVYKASRGAATSIDIVRCGALR
Ga0210391_110622091	3300021433	Soil	GLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVESWYRQALSTASETDLRNDGDYERSYVGLDGIKLTLDLAFVAVYKASKGAATSIDIVRCGPVR
Ga0210390_101516022	3300021474	Soil	VPLTHLRWGVAAVVYASSLMLRASLAVAAVVHNPTGLPVYPNIDSARLEDRLRTDDLGRWCIHLYARSSDSLAAVETWYRHALSTASETDLRNDGDYERSYVGLDGIKLTMDLAFVAVYKASNGAATSIDIVRCGSR
Ga0210390_105744831	3300021474	Soil	MSYLLGRAVPVPLTHLRWGLAAVVYALCLITPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVELDGIKLTKDLAFVAVYKASKGAATSIDIVRCGPVR
Ga0210410_111680741	3300021479	Soil	PLRWGVTAVVCALSIIHASLAMPADVHNPTGLPVYPNIDNARLDDRLRTDDLGRWCIHLSARSLDSLATVENWYRHALATASETDLRNDGDYEKSYVELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGASR
Ga0209863_101751951	3300026281	Prmafrost Soil	MTRASLAMPADVHNPTGLPVYPNIDNARLNDRLRTDDFGRWCIRLSARSLDSLETVENWYRHALSTASETDLRNDGDYESRFVELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGALR
Ga0208488_10418752	3300027110	Forest Soil	MSSRLSCAVRCRLTHLKWIVAAAVYALSVLTRGSLALPAVLHNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVELDGIKLTKDLAFVAVYKASKGAATSIDIVRCGPVR
Ga0209530_11305442	3300027692	Forest Soil	RQRRPNMSSRIWAIGRLEADGIPSWPRAPMPLTPLRGGAAAVIYALALTTRASLAMPAVVQNPTGLPVYPNVDNARLEDRFRTDDLGRWCIHLSARSLDSLATVENWYRHALSTASETDLRNDGDYERSYAGLDGIKLTMDLAFVAVYKASQGAATSIDIVRCGPVR
Ga0209655_101170902	3300027767	Bog Forest Soil	MSSVLPRGPLPLTHRRSGVAAVVCALSLMTSASLAMPADVRNPTGLPVYPNIDNARLDDRLRTDDFGRWCIRLSARSLDSLATVENWYRRALSTASETDLRNDGDYESSYMELDGIKLTMDLAFVAVYKASKGAATS
Ga0209208_100099376	3300027807	Host-Associated	MSLNRLRWSATAICTLSLMSRASLAADVNNPTGLPIYPHVDHAQLEDRLRTDYLGRWCMHFSARSFDSLATVENWYRRTLSSASETDLGHDRDYQRSYAALDGIKLTMNLGFVAIYQASSGAVTSVDIVRCGPIG
Ga0209274_101189381	3300027853	Soil	VAAVIYALSLVTPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVELDGIKLTKDLAFVAVYKASKGAATSIDIVRCGPVR
Ga0209611_100597843	3300027860	Host-Associated	MVFLTHSRWAAAAAVYALSLMSRPSWAVPADANNPTGLPVYPNVDYSRLDDRWRTDDLGRWCIRLAARSSDSLVTVENWYRRALAPASETDLRNDGDYASNYAELDGVKLTMNLAFVAVYKASPGAATSIDIVRCGTT
Ga0209167_105870812	3300027867	Surface Soil	PVLVQNPTGLPVYPNVDSARLEDRLRTDDLGRWCVRLSARSQDSLETVENWYRLALSTASETDLRNDRDYGRSYVELDGIKLTMNLAFVAVYKASRGAATSIDIVRCGALR
Ga0209169_100154904	3300027879	Soil	MVYALSLITPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVELDGIKLTKDLAFVAVYKASKGAATSIDIVRCGPVR
Ga0209275_105933382	3300027884	Soil	LAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVQLDGIKLTMDLAFVAVYKASKGAATSIDIVRCGPVR
Ga0209380_101679931	3300027889	Soil	VVYALSLITPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCTRLSARSLDSLATVEDWYRQALSSASETDLRNDRDYESSYLQLDGIKLTMNLAFVAVYKASKGAATSIDIVRCGPVR
Ga0209624_102544481	3300027895	Forest Soil	VAAVVCALSLMTRASLAMPADVHNPTGLPVYPNIDNARLDDRLRTDDLGRWCIRLSARSLDSLETVENWYRHALSTASETDLRHDGDYESSYVELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGASR
Ga0209006_100078674	3300027908	Forest Soil	VRLIHFQWGLAAVVYTLSMMTDASFAGPVLVQNPTGLPVYPNVDNARLEDRLRTDDLGRWCVRLSARSQDSLEIVENWYRLTLSTASETDLRNDRDYGSYVELDGIKLTMDLTFVAVYKGSKGAVTSIDIVRCGPVR
Ga0209006_101862542	3300027908	Forest Soil	MPADVHNPTGLPVYPNIDNARLDDRLRTDDLGRWCIRLSARSLDSLATVENWYRHALSTASETDLRNDGDYEKGYVELDGIKLTVNLAFVAVYKASKGAATSIDIVRCGASR
Ga0209006_105125781	3300027908	Forest Soil	SFAMPADVHNPTGLPVYPNIDNARLDDRLRTDDLGRWCIRLSARSLDSLETVENWYRHALSTASETDLRHDGDYESSYVELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGASR
Ga0302219_100406193	3300028747	Palsa	MTHASLAVPAVVRNPTGLPVYPNVDSARLEDRLRTDDLGRWCMHLSARSLDSLAAVENWYRQALSTASETDLRNDGDYERSYVGLDGIKLTMDLAFVAVYKASRGAATSIDIVRCGPVR
Ga0302156_102823232	3300028748	Bog	PVPLTHRGWGAAAAVCALSLMTRGSSAMAAKVNNPTGLPIYPNVVYTRLDDRLRTDDLGRWCIRLSARSFDSLASVENWYRRALSTASETDLRNDGDYESRYVALDGIKLTMNLAFVAMYQASKGAATSIDIVRCGPLQ
Ga0302224_101415382	3300028759	Palsa	MTHASLAVPAVVRNPTGLPVYPNVDSARLEDRLRTDDLGRWCMHLSARSLDSLAAVENWYRQALSTASETDLRNDGDYERSYVGLDGIKLTMDLAFVAVYKASRGAATSIDIVRCGP
Ga0302231_103428981	3300028775	Palsa	IGRLKANVVLSKPRRPVSLTHLRRGVAALVCASCFMTRASLAAPADLRNPTGLPVYPNVDYARLADRLRTDDFGRWCMHLSARSLDSLGAVENWYRHALSTASETDLSNDGDYERSYVGLDGIKLTMNLAFVAVYKASSGAATSIDIVSCGPVR
Ga0302223_102059501	3300028781	Palsa	MTRASLAAPADLRNPTGLPVYPNVDYARLADRLRTDDFGRWCMHLSARSLDSLGAVENWYRHALSTASETDLSNDGDYERSYVGLDGIKLTMNLAFVAVYKASSGAATSIDIVSCGPVR
Ga0302232_101913782	3300028789	Palsa	VPLIHLRWGVAAVVYALSLMTRASLAMPAEVHNPTGLPVYPNLDNARLDDRLRTDDLGRWCIRLSARSLDSLATVEDWYRRALSTASETDLRNDGDYESSYVELDGIKLTMNLAFVAVYKASKGAVTSIDIVRCGALRQT
Ga0308309_100945562	3300028906	Soil	VPLTHLRWGVAAVVYALSLITPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVELDGIKLTKDLAFVAVYKASKGAATSIDIVRCGPVR
Ga0311368_105433281	3300029882	Palsa	GLPVYPNLDNARLDDRLRTDDLGRWCIRLSARSLDSLATVEDWYRRALSTASETDLRNDGDYESSYVELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGAFR
Ga0311327_104644461	3300029883	Bog	MAAKVNNPTGLPIYPNVVYTRLDDRLRTDDLGRWCIRLSARSFDSLASVENWYRRALSTASETDLRNDGDYESRYVALDGIKLTMNLAFVAMYQASKGAATSIDIVRCGPLQ
Ga0311329_108172551	3300029907	Bog	DLDNPTGLPVYPNVEGARLEDRLTTDDLGRWCMRLSARSWDSLATVENWYRHALSNASETDLLHDGDYERRYLELDGIKLTKNLAFVAVYKASKGAATSIDIVRCGPLR
Ga0311340_112116691	3300029943	Palsa	VCALSLMTHASLAVPAVVRNPTGLPVYPNVDSARLEDRLRTDDLGRWCMHLSARSLDSLAAVENWYRQALSTASETDLRNDGDYERSYVGLDGIKLTMDLAFVAVYKASRGAATSIDIVRCGPVR
Ga0311352_101011762	3300029944	Palsa	VAAAVCALSLMTHASLAVPAVVRNPTGLPVYPNVDSARLEDRLRTDDLGRWCMHLSARSLDSLAAVENWYRQALSTASETDLRNDGDYERSYVGLDGIKLTMDLAFVAVYKASRGAATSIDIVRCGPVR
Ga0311371_115957341	3300029951	Palsa	DVIPFQPRGLVALAHLRRGVAAAVCALSLMTHASLAVPAVVRNPTGLPVYPNVDSARLEDRLRTDDLGRWCMHLSARSLDSLAAVENWYRQALSTASETDLRNDGDYERSYVGLDGIKLTMDLAFVAVYKASRGAATSIDIVRCGPVR
Ga0311371_115992502	3300029951	Palsa	MHLWPEDASNESIGARNISSRIRWIGRLEADVTPFQSCGPMPLTRLRRGVTVAVCALYLTTRPLLAVPAVVHNPTGLPVYPNIDNARLEDRLRTDDFGRWCIHLSARSLDSLPTVENWYRNALATASETDLRNDGDYERSYVELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGPVR
Ga0311338_114324742	3300030007	Palsa	MPLTRLRRGVTVAVCALYLTTRPLLAVPAVVHNPTGLPVYPNIDNARLEDRLRSDDFGRWCIHLSARSLDSLPTVENWYRNALATASETDLRNDGDYERSYVELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGPVR
Ga0311370_109630731	3300030503	Palsa	VPLIHLRWGVAAVVYALSLMTRASLAMPAEVHNPTGLPVYPNLDNARLDDRLRTDDLGRWCIRLSARSLDSLATVEDWYRRALSTASETDLRNDGDYESSYVELDGIKLTMNLAFVAVYKASKGAATS
Ga0311372_102811434	3300030520	Palsa	LRRGVAAAVCALSLMTHASLAVPAVVRNPTGLPVYPNVDSARLEDRLRTDDLGRWCMHLSARSLDSLAAVENWYRQALSTASETDLRNDGDYERSYVGLDGIKLTMDLAFVAVYKASRGAATSIDIVRCGPVR
Ga0311372_105003053	3300030520	Palsa	MPLTRLRRGVTVAVCALYLTTRPLLAVPAVVHNPTGLPVYPNIDNARLEDRLRTDDFGRWCIHLSARSLDSLPTVENWYRNALATASETDLRNDGDYERSYVELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGPVR
Ga0311357_100731301	3300030524	Palsa	VPLIHLRWGVAAVVYALSLMTRASLAMPAEVHNPTGLPVYPNLDNARLDDRLRTDDLGRWCIRLSARSLDSLATVEDWYRRALSTASETDLRNDGDYERSYVGLDGIKLTMDLAFVAVYKASRGAATS
Ga0311354_112244081	3300030618	Palsa	TCLSSSAGAIICALSLMIHASPASAAGLLNPSGLPVYPNLDNARLEDRLRTDDLGRWCSHLYARSSDSLAAVENWYRRALSSASETNLRNDGDYEKNHVELDGIKLTMNLAFVAVYKASKGASTSIDIVSCGSSDANLERVIAGKPR
Ga0311354_113520122	3300030618	Palsa	MSFLPRRAPVSPARLRCAVAAALYVSSLMAPASLAIPAVVQNPTGMPVYPNIDNARLDDRLRTDDLGRWCIRLSARSLDSLATVENWYRQTLATASETDLRNDGDYERSFAQLDGIKLTMNLAFV
Ga0302314_108075282	3300030906	Palsa	RNPTGLPVYPNVDSARLEDRLRTDDLGRWCMHLSARSLDSLAAVENWYRQALSTASETDLRNDGDYERSYVGLDGIKLTMDLAFVAVYKASRGAATSIDIVRCGPVR
Ga0302180_100892051	3300031028	Palsa	ALAHLRRGVAAAVCALSLMTHASLAVPAVVRNPTGLPVYPNVDSARLEDRLRTDDLGRWCMHLSARSLDSLAAVENWYRQALSTASETDLRNDGDYERSYVGLDGIKLTMDLAFVAVYKASRGAATSIDIVRCGPVR
Ga0302325_108103931	3300031234	Palsa	AVCALYLTTRPLLAVPAVVHNPTGLPVYPNIDNARLEDRLRTDDFGRWCIHLSARSLDSLPTVENWYRNALATASETDLRNDGDYERSYVELDGIKLTMNLAFVAVYKASKGAATSIDIVRCGPVR
Ga0302324_1018007052	3300031236	Palsa	MSFLPRRAPVSPARLRCAVAAALYVSSLMAPASLAIPAVVQNPTGMPVYPNIDNARLDDRLRTDDLGRWCIRLSARSLDSLATVENWYRQTLATASETDLRNDGDYERSFAQLDGIKLTMNLAFVAVYKASKGAVTSIDIVRCGALRQTENSK
Ga0302324_1018409092	3300031236	Palsa	MPLTYLKWGLAAAVYALCLLTRASLAMAAVLHNPTGLPVYPNVDNARLEDRLRTDDLGRWCMHLSARSTDSLETVENWYRNSLSHASETNLRNDGDYDRSYAQLDGIKLTMDL
Ga0310686_1045791902	3300031708	Soil	TGLPVYPNIDNARLDDRLRTDDLGRWCIRLSARSLDSLATVQDWHRHVLSTASETDLRNDGDYVNSYVGLDGIKLTMNLAFVAVYKASKAAATSIDIVLRCFPVNRDPRARAK
Ga0310686_1066083931	3300031708	Soil	VPLTHLRWRVAAVVYALSLITPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCIHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVELDGIKLTMDLAF
Ga0310686_1070505031	3300031708	Soil	MPLTHFRWGLAAVVYALSLMTRASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCIHLSARSLDSLATVENWYRHALSTASETDLRNDGDYERSYVALDGIKLTMDLAFVAVYKASQGAATSIDIVRCGPVR
Ga0310686_1107732262	3300031708	Soil	PTGLPVYPNVDSARLEDRLRTDDLGRWCMHLSARSLDSLAAVENWYRQALSTASETDLRNDGDYERSYVGLDGIKLTMDLAFVAVYKASRGAATSIDIVRCGPVR
Ga0310686_1134778632	3300031708	Soil	VVCALALISSAALATPVAVLSPSGLPIYPNVDGARLEDRLRTDDLGRWCTHLHAQSADSLEAVENWYRRALSGASETNLHNDIDYERRYEELDGVKLTMNLAFVAVYKASRGAVTSIDIVSCGSGR
Ga0307476_103718991	3300031715	Hardwood Forest Soil	RLETDAVPSPPRGSVPLTHLRWGVAALVCALALMTRASLAVAAVVHNPTGLPVYPNIDSARLEDRLRTDDLGRWCIHLSARSLDSLATVENWYRHALSTASETDLRNDGDYERSFVQLDGIKLTMDLAFVAVYKASHGAATSIDIVRCGPIR
Ga0307476_109811071	3300031715	Hardwood Forest Soil	VVYVLSLMTRASLAGPVVVQNPTRLPVYPNADNARIEDRLRTDDLGRWCIRLSARSLDSLETVENWYRLALSTASETDLRNDGDYGRSYVELDGIKLTMNLAFVAVYKASKGAVTSIDIVRCGPVR
Ga0307474_103488121	3300031718	Hardwood Forest Soil	AVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVQLDGIKLTMDLAFVAVYKASKGAATSIDIVRCGPIR
Ga0302319_104417662	3300031788	Bog	VCALSLMTRGSSAMAAKVNNPTGLPIYPNVVYTRLDDRLRTDDLGRWCIRLSARSFDSLASVENWYRRALSTASETDLRNDGDYESRYVALDGIKLTMNLAFVAMYQASKGAATSIDIVRCGPLQ
Ga0307478_103761562	3300031823	Hardwood Forest Soil	VVYALSLITPASLAVPAVVQNPTGLPVYPNIDNARLEDRLRTDDLGRWCMHLSARSSDALATVENWYRQALSTASETDLRNDGDYERSYVQLDGIKLTMDLAFVAVYKASKGAATSIDIVRCGPIR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089739

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences