Metagenome Family F089921

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089921
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	73 residues
Representative Sequence	MSKERASDLARQCTELIRKGNDFPTVWSTLLRRHILVEGIPRERLERNRSLLNIPLITGEQLVFDADVKEFRIQ
Number of Associated Samples	83
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.90 %
% of genes near scaffold ends (potentially truncated)	28.70 %
% of genes from short scaffolds (< 2000 bps)	84.26 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.370 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (17.593 % of family members)
Environment Ontology (ENVO)	Unclassified (29.630 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.741 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.51% β-sheet: 22.55% Coil/Unstructured: 52.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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SCOP family	SCOP domain	Representative PDB	TM-score
d.3.1.4: Transglutaminase core	d1rlla2	1rll	0.61458
d.3.1.5: Arylamine N-acetyltransferase	d1e2ta_	1e2t	0.611
d.218.1.0: automated matches	d4xq7a1	4xq7	0.59595
d.218.1.3: Poly(A) polymerase, PAP, N-terminal domain	d2hhpa2	2hhp	0.5878
b.60.1.7: Dinoflagellate luciferase repeat	d1vpra1	1vpr	0.58224

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF02796	HTH_7	1.85
PF13193	AMP-binding_C	1.85
PF13450	NAD_binding_8	1.85
PF02615	Ldh_2	0.93
PF07238	PilZ	0.93
PF04909	Amidohydro_2	0.93
PF00083	Sugar_tr	0.93
PF00346	Complex1_49kDa	0.93
PF07724	AAA_2	0.93
PF02826	2-Hacid_dh_C	0.93
PF00132	Hexapep	0.93
PF14833	NAD_binding_11	0.93
PF01058	Oxidored_q6	0.93
PF01814	Hemerythrin	0.93
PF00892	EamA	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	0.93
COG0649	NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)	Energy production and conversion [C]	0.93
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	0.93
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	0.93
COG2055	Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family	Energy production and conversion [C]	0.93
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	0.93
COG3261	Ni,Fe-hydrogenase III large subunit	Energy production and conversion [C]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
All Organisms	root	All Organisms	29.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
cellular organisms	root	All Organisms → cellular organisms	29.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.04 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.78 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.93 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.85 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.85 %
Mesorhizobium helmanticense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium helmanticense	0.93 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.93 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.85 %
Mesorhizobium sp. ORS 3324	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. ORS 3324	0.93 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	0.93 %
Mesorhizobium helmanticense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium helmanticense	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.37 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.85 %
Rhizobium sp. BK619	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. BK619	0.93 %
Mesorhizobium sp. ORS 3324	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. ORS 3324	0.93 %
Mesorhizobium helmanticense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium helmanticense	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10760512	Not Available	556	Open in IMG/M
3300004092\|Ga0062389_102005552	Not Available	755	Open in IMG/M
3300004092\|Ga0062389_103858728	Not Available	563	Open in IMG/M
3300004152\|Ga0062386_100164607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1735	Open in IMG/M
3300004152\|Ga0062386_100592915	Not Available	905	Open in IMG/M
3300005332\|Ga0066388_100252908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2401	Open in IMG/M
3300005332\|Ga0066388_102449788	Not Available	947	Open in IMG/M
3300005531\|Ga0070738_10001516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	45339	Open in IMG/M
3300005555\|Ga0066692_11001264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	511	Open in IMG/M
3300005764\|Ga0066903_100007037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10122	Open in IMG/M
3300005764\|Ga0066903_101225296	Not Available	1395	Open in IMG/M
3300005764\|Ga0066903_105675615	Not Available	656	Open in IMG/M
3300006052\|Ga0075029_100547068	Not Available	769	Open in IMG/M
3300006057\|Ga0075026_100268170	Not Available	922	Open in IMG/M
3300006059\|Ga0075017_100794172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. ORS 3324	731	Open in IMG/M
3300006102\|Ga0075015_100503931	Not Available	697	Open in IMG/M
3300007265\|Ga0099794_10567548	Not Available	600	Open in IMG/M
3300009523\|Ga0116221_1111781	Not Available	1203	Open in IMG/M
3300009683\|Ga0116224_10646655	Not Available	506	Open in IMG/M
3300009700\|Ga0116217_11043889	Not Available	500	Open in IMG/M
3300009792\|Ga0126374_11212830	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300009824\|Ga0116219_10388241	Not Available	779	Open in IMG/M
3300009839\|Ga0116223_10139945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1507	Open in IMG/M
3300010048\|Ga0126373_12850053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	540	Open in IMG/M
3300010359\|Ga0126376_11517471	Not Available	699	Open in IMG/M
3300010361\|Ga0126378_11642899	Not Available	730	Open in IMG/M
3300010362\|Ga0126377_11099337	Not Available	864	Open in IMG/M
3300010369\|Ga0136643_10868129	Not Available	518	Open in IMG/M
3300010376\|Ga0126381_102760779	Not Available	701	Open in IMG/M
3300010379\|Ga0136449_100401346	All Organisms → cellular organisms → Bacteria	2433	Open in IMG/M
3300010379\|Ga0136449_100900266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1442	Open in IMG/M
3300012189\|Ga0137388_10235500	All Organisms → cellular organisms → Bacteria	1662	Open in IMG/M
3300012199\|Ga0137383_10241062	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300012201\|Ga0137365_10092412	All Organisms → cellular organisms → Bacteria	2278	Open in IMG/M
3300012210\|Ga0137378_10325944	Not Available	1428	Open in IMG/M
3300012349\|Ga0137387_10400437	Not Available	995	Open in IMG/M
3300014156\|Ga0181518_10043835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2744	Open in IMG/M
3300014489\|Ga0182018_10395522	Not Available	740	Open in IMG/M
3300016319\|Ga0182033_10686154	Not Available	896	Open in IMG/M
3300016357\|Ga0182032_10410097	Not Available	1098	Open in IMG/M
3300016422\|Ga0182039_10385332	Not Available	1186	Open in IMG/M
3300017822\|Ga0187802_10028424	All Organisms → cellular organisms → Bacteria → Proteobacteria	1970	Open in IMG/M
3300017822\|Ga0187802_10203320	Not Available	762	Open in IMG/M
3300017823\|Ga0187818_10029345	Not Available	2359	Open in IMG/M
3300017823\|Ga0187818_10263117	Not Available	755	Open in IMG/M
3300017937\|Ga0187809_10078692	Not Available	1086	Open in IMG/M
3300017955\|Ga0187817_10713444	Not Available	640	Open in IMG/M
3300017959\|Ga0187779_10131335	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300017961\|Ga0187778_10180854	Not Available	1339	Open in IMG/M
3300017970\|Ga0187783_10087973	Not Available	2289	Open in IMG/M
3300017970\|Ga0187783_11405209	Not Available	503	Open in IMG/M
3300017972\|Ga0187781_10061908	Not Available	2575	Open in IMG/M
3300017972\|Ga0187781_10267589	Not Available	1211	Open in IMG/M
3300017972\|Ga0187781_10672549	Not Available	748	Open in IMG/M
3300017973\|Ga0187780_10440842	Not Available	926	Open in IMG/M
3300017973\|Ga0187780_11262853	Not Available	542	Open in IMG/M
3300017975\|Ga0187782_10196839	Not Available	1507	Open in IMG/M
3300017975\|Ga0187782_10518662	Not Available	912	Open in IMG/M
3300017993\|Ga0187823_10036730	All Organisms → cellular organisms → Bacteria → Proteobacteria	1302	Open in IMG/M
3300018006\|Ga0187804_10083883	All Organisms → cellular organisms → Bacteria → Proteobacteria	1291	Open in IMG/M
3300018017\|Ga0187872_10073408	Not Available	1766	Open in IMG/M
3300018017\|Ga0187872_10079322	Not Available	1683	Open in IMG/M
3300018017\|Ga0187872_10112255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1348	Open in IMG/M
3300018062\|Ga0187784_10030633	All Organisms → cellular organisms → Bacteria	4344	Open in IMG/M
3300018062\|Ga0187784_10259383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. BK619	1414	Open in IMG/M
3300018062\|Ga0187784_10545851	Not Available	932	Open in IMG/M
3300018062\|Ga0187784_10955296	Not Available	682	Open in IMG/M
3300018062\|Ga0187784_11320423	Not Available	572	Open in IMG/M
3300018062\|Ga0187784_11322066	Not Available	571	Open in IMG/M
3300018062\|Ga0187784_11587498	Not Available	518	Open in IMG/M
3300018090\|Ga0187770_10336372	Not Available	1178	Open in IMG/M
3300020579\|Ga0210407_10436113	Not Available	1025	Open in IMG/M
3300021168\|Ga0210406_10353564	Not Available	1185	Open in IMG/M
3300021404\|Ga0210389_11064036	Not Available	626	Open in IMG/M
3300021420\|Ga0210394_10035879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4414	Open in IMG/M
3300021432\|Ga0210384_10940514	Not Available	765	Open in IMG/M
3300021560\|Ga0126371_11061272	Not Available	950	Open in IMG/M
3300026551\|Ga0209648_10724076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300027641\|Ga0208827_1103799	Not Available	842	Open in IMG/M
3300027652\|Ga0209007_1083588	Not Available	804	Open in IMG/M
3300027706\|Ga0209581_1000840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	45565	Open in IMG/M
3300027783\|Ga0209448_10003402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4918	Open in IMG/M
3300027854\|Ga0209517_10052540	All Organisms → cellular organisms → Bacteria	3060	Open in IMG/M
3300027854\|Ga0209517_10143063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1540	Open in IMG/M
3300027854\|Ga0209517_10356647	Not Available	836	Open in IMG/M
3300031057\|Ga0170834_103322105	Not Available	806	Open in IMG/M
3300031231\|Ga0170824_106942467	Not Available	1283	Open in IMG/M
3300031543\|Ga0318516_10434028	Not Available	756	Open in IMG/M
3300031545\|Ga0318541_10106760	Not Available	1508	Open in IMG/M
3300031572\|Ga0318515_10265683	Not Available	920	Open in IMG/M
3300031681\|Ga0318572_10121574	Not Available	1492	Open in IMG/M
3300031708\|Ga0310686_116040179	Not Available	596	Open in IMG/M
3300031719\|Ga0306917_11189010	Not Available	592	Open in IMG/M
3300031724\|Ga0318500_10391284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium helmanticense	690	Open in IMG/M
3300031744\|Ga0306918_10037065	All Organisms → cellular organisms → Bacteria	3140	Open in IMG/M
3300031751\|Ga0318494_10781100	Not Available	559	Open in IMG/M
3300031833\|Ga0310917_10514589	Not Available	814	Open in IMG/M
3300031890\|Ga0306925_11341928	Not Available	708	Open in IMG/M
3300031910\|Ga0306923_12571236	Not Available	500	Open in IMG/M
3300031912\|Ga0306921_12269464	Not Available	570	Open in IMG/M
3300031946\|Ga0310910_11442971	Not Available	529	Open in IMG/M
3300031981\|Ga0318531_10510404	Not Available	544	Open in IMG/M
3300032063\|Ga0318504_10261591	Not Available	815	Open in IMG/M
3300032160\|Ga0311301_10105935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5448	Open in IMG/M
3300032160\|Ga0311301_11329607	Not Available	905	Open in IMG/M
3300032261\|Ga0306920_100958353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1248	Open in IMG/M
3300033290\|Ga0318519_10303892	Not Available	934	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.63%
Aquatic	Environmental → Aquatic	19.44%
Arthropoda	Host-Associated → Arthropoda	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.63%
Freshwater	Environmental → Aquatic → Freshwater	15.74%
Sediment	Environmental → Aquatic → Sediment	3.70%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.74%
Loam	Environmental → Terrestrial → Soil → Loam	6.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.70%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.33%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	17.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.81%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	12.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.63%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.93%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010369	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 3)	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_107605122	3300001593	Forest Soil	MSKERASDLARHCTELVRKENDFTTVLSTLLNEHTLVEGIPREKLERNRSLLRIALVTGELLVFDSDVKEFRVQ*
Ga0062389_1020055521	3300004092	Bog Forest Soil	MSREKASDLARQCTELIRKGNDFPTVWSILLKGHTLVEGIPRERIERNRSLLHIPLITGEQLVFDAEVKEFRVQ*
Ga0062389_1038587281	3300004092	Bog Forest Soil	MSKERASDLARQCTELVRQGNNFTTVWSTLLKRHMLVEGGPQRRPEHNRDLLAISLITGEQLVFDADIKEFRVQ*
Ga0062386_1001646072	3300004152	Bog Forest Soil	MSKERAGDLARQCTELVRRGNDFPAVWSILLKSHVLVDGVPRQRLERNRSLLDIPLITGEQLVFDADVKEFRIQ*
Ga0062386_1005929153	3300004152	Bog Forest Soil	MSKERATNLARQCTELVRKGNDFPIVWSTLLNTHALVEGIPPQRLECNRSLLDIPLITGEQLVFDADVKEFRVR*
Ga0066388_1002529081	3300005332	Tropical Forest Soil	MSKERASDLARQCTELVRKGNDFTTIWATLLRRHLLVDGIPRERLERSRSVFDIPLITGERLVFDADFKEFRVQ*
Ga0066388_1024497882	3300005332	Tropical Forest Soil	MQTRQREITDAKRADMSKERASDLARQCTELVRKGNDLTTIWSTLLRRHLLVDGIPRERLERSRSVSDITLITGERLVFDADFKEFRIQ*
Ga0070738_1000151637	3300005531	Surface Soil	MSMERANDLARHCTELVRQGKDFSTVWSMLLKTHALVEGTARQRLECDRSLLDIPLITGEQLVYDADVREFRVQ*
Ga0066692_110012642	3300005555	Soil	ANDLARKCTELVRQGKYFPTVWGAVLKSHTLVEGIPRQRIEGARSLLDIPLITGEQLVFDGDAKEFRVE*
Ga0066903_10000703714	3300005764	Tropical Forest Soil	MPNERANDLARQCTELIRGGNDFPTVWSALLRSHTLVDGVPQQGPEPNRRLLNIPLVTGERLIFDADVKEFRVQ*
Ga0066903_1012252962	3300005764	Tropical Forest Soil	MSKERASDLARQCTELVRKGNDLTTIWSTLLRRHLLVDGIPRERLERSRSVSDITLNTGERLVFDADFKEFRIQ*
Ga0066903_1056756151	3300005764	Tropical Forest Soil	MSKERASDLARQCTELVRKGNDFLTVWSTLLKRHILVDGVPREKLERNRSLLNIPLITGEQLVFDADVKEFRVQ*
Ga0075029_1005470682	3300006052	Watersheds	MSKERANDLARQCTELVREGSNFPTVWSTLLKSHTLVEGIPRERFERDRSLLHIPLVTGEQLIFDSAVKEFRIQ*
Ga0075026_1002681702	3300006057	Watersheds	MSKERASDLARQCTELLRKGNDFTTVWSTLLRKHILVEGVPREKLEPNWRLLNIPLITGEQLVFDADFKEFRVPHP*
Ga0075017_1007941721	3300006059	Watersheds	MSKERASDLARLCTELVRKGNDFPTVWSALLKTNSLVEGIPCERCERNRTLMHIPLVTGEQLIF
Ga0075015_1005039312	3300006102	Watersheds	MSKERANDLARECSKLVRKGRSFPTVWSTVLKGHALVEGIPCQRLEGERSLLDIPLTTGERLVFDADAKEFRVD*
Ga0099794_105675481	3300007265	Vadose Zone Soil	DLAHICTELVRKGEDFPTVWGTVFKGHTLVEGIPRQRLEGKRRLLDIPLITGERLVFDGDAKEFSVD*
Ga0116221_11117812	3300009523	Peatlands Soil	MSKEKASDLARWCTELVRRGNGFPIVWSTLLKSHALVEGIPRQRFERNRSLLHIPLVTGEQLVFDADVKEFRVQ*
Ga0116224_106466551	3300009683	Peatlands Soil	MSRANDLARQCTDLMRKGNSFPTVWSTVLRGHALVEGIPRQRPEGQRLEGKQSLLDVPLITGERLVFDGDAKEFRVD*
Ga0116217_110438892	3300009700	Peatlands Soil	MSTERASDLARHCTELVRKGNNFTTVWSTLLKNHTLVEGVPREMLERNRDLLRVPLITGE
Ga0126374_112128301	3300009792	Tropical Forest Soil	MSKERASDLARQCTELVRKGNDLTTIWSTLLRRHLLVDGIPRERLERSRSVSDITLITGERLVFDADFKEFRIQ*
Ga0116219_103882411	3300009824	Peatlands Soil	MSRERANDLARQCTELVRSGNAFPRIWSTLLKGHALVEGIPRQRLERDRSLLDIPLITGEQLVFDAQVKEFRIQ*
Ga0116223_101399454	3300009839	Peatlands Soil	MSKERAGDLARRCTELVRKGKDFPNVWSTLLKGHALVEGIPRERLERNRRLLHIPLNTGEQLVFDADVKEFRIQ*
Ga0126373_128500531	3300010048	Tropical Forest Soil	LARQCTELVRKGNNFPLVWSTLLKSHILVDGVPRKRLERNRNLLDIPLITGERLVFDPDFKEFRVQ*
Ga0126376_115174712	3300010359	Tropical Forest Soil	MQTRQREITDAKRADMSKERASDLARQCTELVRKGNDLTTIWSTLLRRHLLVDGIPRERLERSRSVSDITLNTGERLVFDADFKEFRIQ*
Ga0126378_116428991	3300010361	Tropical Forest Soil	MTNERANDLARQCTALIRSGNDFPTVWSTLLRSHTLVDGVPQQGPERNRRLLNIPLVTGERL
Ga0126377_110993372	3300010362	Tropical Forest Soil	MQTRQREITDAKRADMSKERASDLARQCTELVRKGNDFTTIWATLLRRHLLVDGIPRERLERSRSVSDITLITGERLVFDADFKEFRIQ*
Ga0136643_108681291	3300010369	Termite Gut	MPQHLAQVCTELVRKGNDFPTIWTTLLKGHSLVKSIPESRLEGKRPVLVVRLITGE
Ga0126381_1027607792	3300010376	Tropical Forest Soil	MSKERASDLARQCTELVRKGNNFPLVWSTLLKSHILVDGVPRERLERNRSLLDIPLITGERLVFDPDFKEFRV
Ga0136449_1004013463	3300010379	Peatlands Soil	MSKERASDLARLCTELVRKGNDFPIVWSTLLKSHALVEGIPRQRLEHNRSLLDIPLITGEQLAVDSDVKEFRVQ*
Ga0136449_1009002661	3300010379	Peatlands Soil	QQWALWRAEMSKERANDLARQCTEMVREGSNFPTVWSTLLKSHTLVEGIPRERFERDRSLLHIPLVTGEQLIFDSAVKEFRIQ*
Ga0137388_102355001	3300012189	Vadose Zone Soil	MSKERANDLAHVCTELVRKGKDFPTVWGTVLKGHALVEGIPRQRLEGKRSLLDIPLITGERL
Ga0137383_102410622	3300012199	Vadose Zone Soil	MSEERANDLARKCTELVRQGKDFPTVWGAVLKSHTLVEGIPRQRIEGARSLLDIPLITGEQLVFDGDAKEFRVE*
Ga0137365_100924123	3300012201	Vadose Zone Soil	MSKERANDLARRCTELVRQGKDFPTVWGAVLKSHTLVEGIPRQRIEGARSLLDIPLITGEQLVFDGDAKEFRVE*
Ga0137378_103259443	3300012210	Vadose Zone Soil	MSKERASDLARHCTELVRRGKDFPQVWSTLLKTHLLVEGTPRERLERSRRLLDIPLITGEQLVFDPDVKEFRVQQSAEYSIVEYWHP*
Ga0137387_104004373	3300012349	Vadose Zone Soil	MSKERASDLARHCTELVRRGKDFPQVWSTLLKTHLLVEGTPRERLERSRRLLDIPLITGEQLVFDPDVK
Ga0137387_110101311	3300012349	Vadose Zone Soil	MSKERAADLAQACTELVRHGKDFPTVWDAVLKRHTLVDGIPHQRLEGSRCLLEIP
Ga0181518_100438353	3300014156	Bog	MSKERATRLARQCTELVRKGNDFPIVWSTLLKTHALVEGITRQRLEYNRSLLDIPLIAGAQLVFDAEVKEFRVR*
Ga0182018_103955222	3300014489	Palsa	MSKERATDLARQCTELVRKGNAFPTVWSTLLKGHALVEGIPRQKLEGNRSLLDIPLITGEQLAFDADVKEFRVR*
Ga0182033_106861542	3300016319	Soil	ASDLARQCTELIRKGNDFPTVWSTVLKRHILVQGAPRERLERNRSLLNISLITGEQLVFDVDVKEFRVQ
Ga0182032_104100972	3300016357	Soil	MSMERANDLARHCTELVRKGNDFPTVWSTLLRTHTLVEGTARQRLECERSLLDIPLITGEQLVYDADVKEFRVK
Ga0182039_103853322	3300016422	Soil	MSKERASDLARQCTELIRKGNDFPTVWSTVLKRHILVQGAPRERLERNRSLLNISLITGEQLVFDVDVNEFRVQ
Ga0187802_100284243	3300017822	Freshwater Sediment	MSKERASDLARQCTELIRSSDFPTVWSTLLRRHILVDGVPQEKLERNRSLLNIPLITGEQLVFDADIKEFRVQ
Ga0187802_102033202	3300017822	Freshwater Sediment	MSKERATDLARQCTELVRKGNDFPIVWSTLLNTHALVEGIPRQRLECNRSLLDIPLITGEQLVFDADVKEFRVR
Ga0187818_100293453	3300017823	Freshwater Sediment	MSKERASDLARQCTELIRSSDFPTVWSTLLRRHILVDGVQQEKLERNRSLLNIPLITGEQLVFDADIKEFRVQ
Ga0187818_102631173	3300017823	Freshwater Sediment	MSKERASDLARQCTELVRKGNDFPIVWSTLLNTHALVEGIPRQRLECNRSLLDIPLITGEQLVFDADVKEFRVR
Ga0187809_100786922	3300017937	Freshwater Sediment	RAEMSKERASDLARQCTELIRSSDFPTVWSTLLRRHILVDGVPQEKLERNRSLLNIPLITGEQLVFDADIKEFRVQ
Ga0187817_107134442	3300017955	Freshwater Sediment	MSKERAGDLARRCTELVRKGNDFPNVWSTLLKGHALVEGIPRERLERNRRLLHIPLITGEQLVFDADVKEFRVQ
Ga0187779_101313354	3300017959	Tropical Peatland	MSKERASDLARQCTELIRKGNDFPTVWSTLLRRHILVEGVPREKLERNRSLLNIPLITGEQLVFDADIKE
Ga0187778_101808542	3300017961	Tropical Peatland	MSKERAGDLARQCTELVRKGNDFATVWSTLLKRHILVEGIPRERLERNRSLLNIPLITGEQLVFDADFKEFRIQ
Ga0187783_100879732	3300017970	Tropical Peatland	MSKERASDLARQCTELVRNGNDFSTVWSTLLKRHILVEGIPRERLERNRSLLNIPLITGEQLVFDADVKEFRIQ
Ga0187783_114052092	3300017970	Tropical Peatland	MSRERANDLARQCTELVRKGNDFLTVWSTLLKSHILVEGIPREKLERNRSLLNIPLITGEQLVFDADVKEFRVQ
Ga0187781_100619085	3300017972	Tropical Peatland	MSMERANDLARHCTELVRKGNDFPTVWSTLLKTHALVEGTAQQRLECDRSLLDIPLITGEQLVYDADVKEFRIQ
Ga0187781_102675892	3300017972	Tropical Peatland	MGIDQIVKHEVQQRRGGSEMSKERASDLARRCTELVRNGNDFSTVWSTLLKRHILVEGIPRERLERNRSLLNIPLITGEQLVFDADVKEFRIQ
Ga0187781_106725493	3300017972	Tropical Peatland	MSKERASDLARQCTELIRKGNDFPTVWSTLLRRHILVEGIPRERLERNRSLLNIPLITGEQLVFDADVKEFRIQ
Ga0187780_104408422	3300017973	Tropical Peatland	MSKERASDLARQCTELIRKGNDFPTVWSTLLRRHILVEGVPREKLERNRSLLNIPLITGEQLVFDADIKEFRIQ
Ga0187780_112628531	3300017973	Tropical Peatland	MSRERANDLARLCTELVRKGNAFPIVWSTLLKGHTLVEGIPRQRLEGNRNLLDIPLITGEQLVFDADIKQFSIK
Ga0187782_101968391	3300017975	Tropical Peatland	MGIDQIVKHEVQQRRGGSEMSKERASDLARQCTELVRNGNDFSTVWSTLLKRHILVEGIPRERLERNRSLLNIPLITGEQLVFDADVKEFRIQ
Ga0187782_105186622	3300017975	Tropical Peatland	MSNESASDLARHCTDLIRKGNHFPTVWSTLLRRHILVEGIPRERLERNRSLLNIPLITGEQLVFDADVKEFRIQ
Ga0187823_100367304	3300017993	Freshwater Sediment	RQCTELIRSSDFPTVWSTLLRRHILVDGVPQEKLERNRSLLNIPLITGEQLVFDADIKEFRVQ
Ga0187804_100838831	3300018006	Freshwater Sediment	AEMSKERASDLARQCTELIRSSDFPTVWSTLLRRHILVDGVPQEKLERNRSLLNIPLITGEQLVFDADIKEFRVQ
Ga0187872_100734082	3300018017	Peatland	MSKERATDLARQCTELVRKGNGFPIVWSTLLKTHALVEGIPRQRVECNRSLLDIPLITGEQLVFDADVKEFRVR
Ga0187872_100793224	3300018017	Peatland	MRQCTQLVRNGKDFPIVWSTLLKNHALVEGIPRQRLERNRSLLNIPLITGEQLVFDADVKEFRVQ
Ga0187872_101122552	3300018017	Peatland	MSKERATRLARQCTELVRKGNDFPIVWSTLLKTHALVEGITRQRLEYNRSLLDIPLITGAQLVFDADVKEFRVR
Ga0187784_100306331	3300018062	Tropical Peatland	MSERASDLARQCTELVRQGNDFPTVWSGLLKTHTLVEGTARQRLESTRSLLDIPLITGEQLVFDADVKEFRVQ
Ga0187784_102593833	3300018062	Tropical Peatland	MSKERAGDLARHCTDLVRKGYSFPTVWSTLLKTHVLVDGVPRERLEHNRRLLNIPLTTGERLVFDADVKEFRIQ
Ga0187784_105458511	3300018062	Tropical Peatland	MGIDQIVKHEVQQRRGGSEMSKERASDLAWRCTELVRNGNDFSTVWSTLLKRHILVEGIPRERLERNRSLLNIPLITGEQLVFDADVKEFRIQ
Ga0187784_109552961	3300018062	Tropical Peatland	SKERAGDLARQCTDLVREGYSFPTVWSTLLKTHVLVDGVPRERLEHSRRLLNIPLITGERLVFDADVKEFRIQ
Ga0187784_113204232	3300018062	Tropical Peatland	MSSERACDLARHCTELVRKGNDFPTVWSTLLKTHALVEGTARQRLECTRSLLDIPLITGEQLVYDADVREFRIQ
Ga0187784_113220661	3300018062	Tropical Peatland	DQEEEMSERASDLARQCTELVRQGNDFPTVWSSLLKTHTLVEGTARQRLESTRSLLDIPLITGEQLVFDADVKEFRVQ
Ga0187784_115874981	3300018062	Tropical Peatland	MSERAIDLARQCTELVREGNDFPTVWSTLLRTHRLVEGTARQRLDSTRSLLDIPLVTGEQLVCDADVKEFRVQ
Ga0187770_103363722	3300018090	Tropical Peatland	MSKERAGDLARQCTELVRKGNDFATVWSTLLKRHILVEGIPRERRERNRSLLNIPLITGEQLVFDADFKEFRIQ
Ga0210407_104361132	3300020579	Soil	MSKERASDLARHCTELVREGNDFATVWSTLLKDHTLVEGVPREKLERNRNLLRIPLITGEQLVFDPDVKEFRVQ
Ga0210406_103535645	3300021168	Soil	SSERASELARQCTELVRKGNDFPNVWSALLKSHALVNGIPQQRLEHNRSLLDIPLITGERLVFDADVKEFRVQ
Ga0210389_110640361	3300021404	Soil	MSNERASDLARHCTELVRKGNDFTTVWSTLLKGHTLVEGIPREKFERNRNLLRIPPITGEQLVFDPDVKEFRV
Ga0210394_100358798	3300021420	Soil	MSRERASDLARQCTELVRRGNDFPTVWSTLLKSHALVEDIPRERIEQNRSLLHIPLITGEQLVFDADIKEFRIQ
Ga0210384_109405143	3300021432	Soil	MSSERASELARQCTELVRKGNDFPNVWSALLKSHALVNGIPQQRLEHNRSLLDIPLITGERLVFDADVKEFRVQ
Ga0126371_110612721	3300021560	Tropical Forest Soil	MPNERANDLARQCTELIRGGNDFPTVWSALLRSHTLVDGVPQQGPEPNRRLLNIPLVTGERLIFDADVKEFRVQ
Ga0209648_107240761	3300026551	Grasslands Soil	MSKERANDLARKCTELVRQGKDFPTVWGEILKSHTLVQGIPRQRIEGARSLLDIPLITGEQLVFDGDAKEFRVE
Ga0208827_11037991	3300027641	Peatlands Soil	MSKEKASDLARWCTELVRRGNGFPIVWSTLLKSHALVEGIPRQRFERNRSLLHIPLVTGEQLVFDADVKE
Ga0209007_10835881	3300027652	Forest Soil	MSREKASDLARQCTQLIRKGNNFSTVWSTLLKNHNLVEGIPRERPERSRNLLHIPLITGEQLVFDAEVKEFRVQ
Ga0209581_100084036	3300027706	Surface Soil	MSMERANDLARHCTELVRQGKDFSTVWSMLLKTHALVEGTARQRLECDRSLLDIPLITGEQLVYDADVREFRVQ
Ga0209448_100034021	3300027783	Bog Forest Soil	MSKGRASDLARQCTELLRKGNDFSTVWSTLLRRHILVEGIPREKLECNRSLLNIPLITGEQLVLNADVKEFSVQ
Ga0209517_100525406	3300027854	Peatlands Soil	MSKEKASDLARWCTELVRRGNGFPIVWSTLLKSHALVEGIPRQRFERNRSLLHIPLVTGEQLVFDADVKEFRVQ
Ga0209517_101430632	3300027854	Peatlands Soil	MSKERAGDLARRCTELVRKGKDFPNVWSTLLKGHALVEGIPRERLERNRRLLHIPLNTGEQLVFDADVKEFRIQ
Ga0209517_103566472	3300027854	Peatlands Soil	MSKERASDLARQCTELVRKGNDFPIVWSTLLKSHALVEGIPRQRLEHNRSLLDIPLITGEQLAVDSDVKEFRVQ
Ga0170834_1033221052	3300031057	Forest Soil	MSKERASDLARQCTELIRSSDFPTVWSNLLRRHILVDGVPQEKLERNRSLLNIPLITGEQLVFDADIKEFRVQ
Ga0170824_1069424671	3300031231	Forest Soil	MSKERAADLARHCTELVRKGNDFTTVWATLLKGHTLVEGIPREQHERSRSLLCIPLITGEQLVFDPDIKEFRVQ
Ga0318516_104340282	3300031543	Soil	MPNERANDLARQCTELIRGGNDFPTVWSALLRSHTLVDGVPQQGPEPNRRLLNIPLVTGERLIFDAEVKEFRVQ
Ga0318541_101067603	3300031545	Soil	MSTERANDLARTCTELVRKGKDFPSVWGTVLQGHTLVEGVPCQRLEGKRSLLDIPLITGERLVFDEDAKEFRVD
Ga0318515_102656834	3300031572	Soil	STERANDLARTCTELVRKGKDFPSVWGTVLQGHTLVEGVPCQRLEGKRSLLDIPLITGERLVFDEDAKEFRVD
Ga0318572_101215742	3300031681	Soil	MSTERANDLARTCTELVRKGKDFPSVWGTVLQGHTLVEGVPRQRLEGKRSLLDIPLITGERLVFDEDAKEFRVD
Ga0310686_1160401791	3300031708	Soil	VEMSTERASDLARHCTELVRNGNDFTTVWSTLLKGHTLVEGIPREWSERNRHLLRVPLVTGEQLVFDADIKEFRVQ
Ga0306917_111890102	3300031719	Soil	MPNERANDLARQCTELIRGGNDFPTVWSALLRSHTLVDGVPQQGPEPNRRLLNIPLVTGERLIFDADVKEF
Ga0318500_103912841	3300031724	Soil	MTNERANDLARQCTALIRSGNDFPTVWSTLLRSHTLVDGVPQQGPERNRRLLNIPLVTSERLIFDADVKEFRVQ
Ga0306918_100370655	3300031744	Soil	MSTERANDLARTCTELVRKGKDFPSVWGTVLQGHTLVEGVPSQRLEGKRSLLDIPLITGERLVFDEDAKEFRVD
Ga0318494_107811001	3300031751	Soil	MSTERANDLARTCTELVRKGKDFPSVWGTVLQGHTLVEGVPCQRLEGKRSLLDIPLITGERLVFDEDAK
Ga0310917_105145893	3300031833	Soil	QCTELIRGGNDFPTVWSALLRSHTLVDGVPQQGPEPNRRLLNIPLVTGERLIFDADVKEFRVQ
Ga0306925_113419283	3300031890	Soil	SMSTERANDLARTCTELVRKGKDFPSVWGTVLQGHTLVEGVPCQRLEGKRSLLDIPLITGERLVFDEDAKEFRVD
Ga0306923_125712362	3300031910	Soil	MSKERASDLARQCTELVRKGNDFPTVWSTLLKRHILVEGVPREKLERNRSLLNIPLITGE
Ga0306921_122694641	3300031912	Soil	MSKERASDLARQCTELIRKGNDFPTVWSTVLKRHILVQGAPRERLERNRSLLNISLITGEQLVFDVDVKEFRVQ
Ga0310910_114429711	3300031946	Soil	MSKERASDLARQCTELVRKGNDFPTVWSTLLKSHTLVEGTPRQRVERSRSLLNIPLITGPKRGASGGGAP
Ga0318531_105104042	3300031981	Soil	TERANDLARTCTELVRKGKDFPSVWGTVLQGHTLVEGVPCQRLEGKRSLLDIPLITGERLVFDEDAKEFRVD
Ga0318504_102615913	3300032063	Soil	RANDLARTCTELVRKGKDFPSVWGTVLQGHTLVEGVPSQRLEGKRSLLDIPLITGERLVFDEDAKEFRVD
Ga0311301_1010593512	3300032160	Peatlands Soil	MSKERANDLARQCTEMVREGSNFPTVWSTLLKSHTLVEGIPRERFERDRSLLHIPLVTGEQLIFDSAVKEFRIQ
Ga0311301_113296072	3300032160	Peatlands Soil	MSKERANDLARQCTELVREGSNFPTVWSKLLKSHTLVEGIPRERFERDRSLLHIPLVTGEQLIFDSAVKEFRIQ
Ga0306920_1009583531	3300032261	Soil	MSKERASDLARQCTELIRKGNDFPTVWSTLLKRHILVEDIPREKLERNWSLLNIPLITGKQLVFDADVREFRIQ
Ga0318519_103038924	3300033290	Soil	MSKERASDLARQCTELIRKGTDFPTVWSTLLKRHILVEGVPREKLERNRSLLNIPLITGE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089921

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences