Metagenome Family F089967

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089967
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	77 residues
Representative Sequence	MIRCEHASGCFLALLGFLAVSPLSHAQEPQQPMVYEGPVGGLRVIEEGQPPVMIHATMEQMKQFREANPNAR
Number of Associated Samples	82
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.23 %
% of genes near scaffold ends (potentially truncated)	93.52 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.926 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.148 % of family members)
Environment Ontology (ENVO)	Unclassified (34.259 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.704 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 28.00% β-sheet: 6.00% Coil/Unstructured: 66.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF01467	CTP_transf_like	2.78
PF12697	Abhydrolase_6	1.85
PF00069	Pkinase	1.85
PF06170	DUF983	0.93
PF00891	Methyltransf_2	0.93
PF01804	Penicil_amidase	0.93
PF07690	MFS_1	0.93
PF00324	AA_permease	0.93
PF07238	PilZ	0.93
PF02371	Transposase_20	0.93
PF07969	Amidohydro_3	0.93
PF01740	STAS	0.93
PF12779	WXXGXW	0.93
PF14534	DUF4440	0.93
PF13377	Peripla_BP_3	0.93
PF13365	Trypsin_2	0.93
PF13683	rve_3	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.41
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.93
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.93
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.93
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.93
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.93
COG5349	Uncharacterized conserved protein, DUF983 family	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.93 %
Unclassified	root	N/A	49.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.93 %
Unclassified	root	N/A	49.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.93 %
Unclassified	root	N/A	49.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	20.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.04 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.04 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11.11 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.85 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.04 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	11.11 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	1.85 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.04 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	10.19 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	1.85 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.04 %
Oleiagrimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Oleiagrimonas	10.19 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	1.85 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.93 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.93 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.04 %
Oleiagrimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Oleiagrimonas → Oleiagrimonas soli	10.19 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	1.85 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.93 %
Labilitrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae	0.93 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.04 %
Oleiagrimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Oleiagrimonas → Oleiagrimonas soli	10.19 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	1.85 %
Labilithrix	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix	0.93 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.93 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.04 %
Oleiagrimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Oleiagrimonas → Oleiagrimonas soli	10.19 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	1.85 %
Labilithrix luteola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	0.93 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.93 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000651\|AP72_2010_repI_A10DRAFT_1053545	Not Available	533	Open in IMG/M
3300002917\|JGI25616J43925_10107757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1145	Open in IMG/M
3300004633\|Ga0066395_11007858	Not Available	508	Open in IMG/M
3300005332\|Ga0066388_103127680	Not Available	846	Open in IMG/M
3300005332\|Ga0066388_106279807	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005332\|Ga0066388_108265586	Not Available	519	Open in IMG/M
3300005434\|Ga0070709_11309264	Not Available	585	Open in IMG/M
3300005450\|Ga0066682_10021539	All Organisms → cellular organisms → Bacteria → Acidobacteria	3658	Open in IMG/M
3300005451\|Ga0066681_10631955	Not Available	657	Open in IMG/M
3300005764\|Ga0066903_100832888	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300005764\|Ga0066903_103559796	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	839	Open in IMG/M
3300006903\|Ga0075426_11073419	Not Available	609	Open in IMG/M
3300007076\|Ga0075435_100274236	All Organisms → cellular organisms → Bacteria → Acidobacteria	1439	Open in IMG/M
3300007258\|Ga0099793_10418360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300007265\|Ga0099794_10088631	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300009088\|Ga0099830_10783333	Not Available	786	Open in IMG/M
3300010048\|Ga0126373_11508488	Not Available	737	Open in IMG/M
3300010048\|Ga0126373_12072524	Not Available	631	Open in IMG/M
3300010322\|Ga0134084_10130112	Not Available	830	Open in IMG/M
3300010358\|Ga0126370_12123299	Not Available	552	Open in IMG/M
3300010359\|Ga0126376_12114573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Oleiagrimonas → Oleiagrimonas soli	607	Open in IMG/M
3300010361\|Ga0126378_11530406	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300010361\|Ga0126378_11682049	Not Available	721	Open in IMG/M
3300010361\|Ga0126378_12341430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Oleiagrimonas → Oleiagrimonas soli	610	Open in IMG/M
3300010361\|Ga0126378_12523076	Not Available	587	Open in IMG/M
3300010366\|Ga0126379_12035490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Oleiagrimonas → Oleiagrimonas soli	676	Open in IMG/M
3300010376\|Ga0126381_103475497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Oleiagrimonas → Oleiagrimonas soli	619	Open in IMG/M
3300010398\|Ga0126383_10158720	All Organisms → cellular organisms → Bacteria	2120	Open in IMG/M
3300011269\|Ga0137392_10455307	Not Available	1063	Open in IMG/M
3300012199\|Ga0137383_10149766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1708	Open in IMG/M
3300012209\|Ga0137379_10869280	Not Available	806	Open in IMG/M
3300012361\|Ga0137360_10626366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300012685\|Ga0137397_10161246	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	1663	Open in IMG/M
3300012917\|Ga0137395_10471571	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300012918\|Ga0137396_10708603	Not Available	742	Open in IMG/M
3300012922\|Ga0137394_11341755	Not Available	577	Open in IMG/M
3300012923\|Ga0137359_10134505	All Organisms → cellular organisms → Bacteria	2200	Open in IMG/M
3300012923\|Ga0137359_10677425	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300012924\|Ga0137413_11241984	Not Available	596	Open in IMG/M
3300012927\|Ga0137416_10291386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1349	Open in IMG/M
3300012927\|Ga0137416_12086152	Not Available	521	Open in IMG/M
3300012971\|Ga0126369_11553300	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300012971\|Ga0126369_11812186	Not Available	699	Open in IMG/M
3300012977\|Ga0134087_10200678	All Organisms → cellular organisms → Bacteria → Acidobacteria	893	Open in IMG/M
3300015053\|Ga0137405_1090784	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1841	Open in IMG/M
3300015245\|Ga0137409_10756457	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300016270\|Ga0182036_10431651	Not Available	1032	Open in IMG/M
3300016319\|Ga0182033_10372894	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300016357\|Ga0182032_10709901	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300016387\|Ga0182040_10675766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Oleiagrimonas → Oleiagrimonas soli	842	Open in IMG/M
3300016387\|Ga0182040_10995461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Oleiagrimonas → Oleiagrimonas soli	699	Open in IMG/M
3300016404\|Ga0182037_10700883	Not Available	867	Open in IMG/M
3300016404\|Ga0182037_10870691	Not Available	780	Open in IMG/M
3300016404\|Ga0182037_12000015	Not Available	520	Open in IMG/M
3300016422\|Ga0182039_10135106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1885	Open in IMG/M
3300016422\|Ga0182039_11300132	Not Available	659	Open in IMG/M
3300019789\|Ga0137408_1177909	Not Available	674	Open in IMG/M
3300020199\|Ga0179592_10291638	Not Available	726	Open in IMG/M
3300020580\|Ga0210403_10945846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300020580\|Ga0210403_10982334	Not Available	662	Open in IMG/M
3300021168\|Ga0210406_11139437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300021405\|Ga0210387_11024098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300021479\|Ga0210410_10260215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1556	Open in IMG/M
3300021560\|Ga0126371_10089411	All Organisms → cellular organisms → Bacteria	3043	Open in IMG/M
3300021560\|Ga0126371_10141985	All Organisms → cellular organisms → Bacteria → Acidobacteria	2454	Open in IMG/M
3300021560\|Ga0126371_10426767	Not Available	1470	Open in IMG/M
3300024182\|Ga0247669_1004462	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	3003	Open in IMG/M
3300024330\|Ga0137417_1260361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1180	Open in IMG/M
3300026317\|Ga0209154_1053007	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300026555\|Ga0179593_1137116	All Organisms → cellular organisms → Bacteria	3289	Open in IMG/M
3300027643\|Ga0209076_1160000	Not Available	628	Open in IMG/M
3300027908\|Ga0209006_10259965	All Organisms → cellular organisms → Bacteria → Acidobacteria	1491	Open in IMG/M
3300028536\|Ga0137415_10317225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1362	Open in IMG/M
3300028536\|Ga0137415_10501710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1021	Open in IMG/M
3300031446\|Ga0170820_14756568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Oleiagrimonas → Oleiagrimonas soli	576	Open in IMG/M
3300031545\|Ga0318541_10556911	Not Available	641	Open in IMG/M
3300031719\|Ga0306917_10924057	Not Available	682	Open in IMG/M
3300031723\|Ga0318493_10774044	Not Available	540	Open in IMG/M
3300031754\|Ga0307475_10118422	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300031754\|Ga0307475_10601854	Not Available	880	Open in IMG/M
3300031780\|Ga0318508_1166628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Oleiagrimonas → Oleiagrimonas soli	628	Open in IMG/M
3300031798\|Ga0318523_10089800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1498	Open in IMG/M
3300031823\|Ga0307478_11462783	Not Available	566	Open in IMG/M
3300031833\|Ga0310917_10444376	Not Available	882	Open in IMG/M
3300031879\|Ga0306919_10346248	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300031879\|Ga0306919_11114269	Not Available	601	Open in IMG/M
3300031890\|Ga0306925_12174227	Not Available	517	Open in IMG/M
3300031897\|Ga0318520_10885904	Not Available	562	Open in IMG/M
3300031910\|Ga0306923_10214215	All Organisms → cellular organisms → Bacteria	2203	Open in IMG/M
3300031910\|Ga0306923_10388136	Not Available	1590	Open in IMG/M
3300031942\|Ga0310916_11580332	Not Available	533	Open in IMG/M
3300031954\|Ga0306926_10522630	Not Available	1457	Open in IMG/M
3300031962\|Ga0307479_10368061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1421	Open in IMG/M
3300031962\|Ga0307479_10932848	All Organisms → cellular organisms → Bacteria → Acidobacteria	839	Open in IMG/M
3300031962\|Ga0307479_11546938	Not Available	619	Open in IMG/M
3300032001\|Ga0306922_11184340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Oleiagrimonas → Oleiagrimonas soli	779	Open in IMG/M
3300032059\|Ga0318533_10630813	Not Available	786	Open in IMG/M
3300032063\|Ga0318504_10325400	Not Available	729	Open in IMG/M
3300032076\|Ga0306924_11340448	Not Available	767	Open in IMG/M
3300032076\|Ga0306924_12410564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Oleiagrimonas → Oleiagrimonas soli	530	Open in IMG/M
3300032094\|Ga0318540_10665343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Oleiagrimonas → Oleiagrimonas soli	502	Open in IMG/M
3300032174\|Ga0307470_10692414	Not Available	775	Open in IMG/M
3300032261\|Ga0306920_102877716	Not Available	653	Open in IMG/M
3300033289\|Ga0310914_10724381	Not Available	891	Open in IMG/M
3300033289\|Ga0310914_11310681	Not Available	627	Open in IMG/M
3300033290\|Ga0318519_10019318	All Organisms → cellular organisms → Bacteria	3015	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.15%
Host-Associated	Host-Associated	1.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.15%
Plants	Host-Associated → Plants	1.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.74%
Loam	Environmental → Terrestrial → Soil → Loam	7.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	46.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A10DRAFT_10535451	3300000651	Forest Soil	MIRSKFIPTCFVVGLGLLMLGPASLAQEPDSQEANKPMVYEGTVGGLRVIEEGQPPVMIHATMEEMKRFHEANPH
JGI25616J43925_101077571	3300002917	Grasslands Soil	MIRREHVSGCFLALLGFLAVSPLSRAQEPKQPMVYEETVGGLRYLEEGQPPAMIHATVDD
Ga0066395_110078581	3300004633	Tropical Forest Soil	MIRYKYASGCFLALLAFLMVGPSSRAQDSNKTQEANKAMVFEGTVGGWRILEEGQPPAMIHATVEDMKRFREANPNARPGQVQAASTANDLSYH
Ga0066388_1031276801	3300005332	Tropical Forest Soil	MIRKHAPACFLVVLGFLVVSQTSGAQEPNKGQGANQPMVYEGTVGGWRIIEEGQPPVMIHATVEDMKRFREVNPNARP
Ga0066388_1062798072	3300005332	Tropical Forest Soil	RRQMIRYKFASVCLVALLGFLVATPLSHAQEPNNAQEPNKPMVYEGTVGGLRFIEEGQPPVIIHAAVEDMKRFREDNAARPGASGQHRK*
Ga0066388_1082655861	3300005332	Tropical Forest Soil	MFRDKCVSACFLAVFGILLAGSSSSAQEPKDAQDANKPMVFEGTVGGWRVIEEGQPPVMIHATVEDMKRFHEANP
Ga0070709_113092642	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIRFHVAPVCSVAVLAVLASSPSLRAQEPNQQQPPVYQGPVGGSRVIEEGQPRVMIHATTEQMKQFREANPNARPGSVQ
Ga0066682_100215395	3300005450	Soil	MIRKYALACFLAILGFLVVSPSSRAQEPNKAQEGNKPMVFEGTVGGWRIIEEGQPPVMIHATAEEMKRFREANPH
Ga0066681_106319551	3300005451	Soil	MRFHFASVCLVAVVVCMAVSPPSRAQEPNEPQQPAVYEGPVGGLRVIEEGQPPVMIHATTEQMRQFREANPHARHGSVRAASTSNDLFYH
Ga0066654_108524122	3300005587	Soil	MIAHKYAPACFLMLLGFLVASPPSHAQERQRPMVYEGSPGGWRILEEGQSPALIHATVED
Ga0066903_1008328881	3300005764	Tropical Forest Soil	MIRKYAPACFLAVLGFLVVSPSSRAQEANKPMVFEGTVGGWRILEEGQPPAMIHATVEDM
Ga0066903_1035597963	3300005764	Tropical Forest Soil	MIPNKYVPTCFLAFLGFLIASPFSNAQGPKQEPNQPMVYEGTVGGLRIIEEGQ
Ga0075426_110734192	3300006903	Populus Rhizosphere	MIQSKYALVCFVAVVGILASSPSSRAQEPNQPQQPMVYEGTVGGLRVIEEGQPPVMIHAPAEEMKRFREGNPHARPGQVQAAS
Ga0075435_1002742362	3300007076	Populus Rhizosphere	MFRSKYVPGCCLAVLGLLLIVPSPNAQEPDQAQEHNKPMVFEGTVGGWRVIEEGQPPVMIHATAEEMKRFREANPHARP
Ga0099793_104183602	3300007258	Vadose Zone Soil	MIRCEHASGCFLALLGFLAVSPLSQAQEPQQPAVYEGPVGGLRVIEEGQPPVMIHATTEQMK
Ga0099794_100886311	3300007265	Vadose Zone Soil	MIRCEHASGCFLALLGFLAVSPLSHAQEPQQPMVYEGPVGGLRVIEEGQPPVMIHATMEQMKQFREANPNARPGSVQAAATTNDLFYHGGT
Ga0099830_107833331	3300009088	Vadose Zone Soil	MIRREHAAGCFLALLGFLAVSPLSHAQEPQQPMVYEGPVGGLRVIEEGQPPIMIHATMEQMKQFREANPNARPGSVQAAATTNDLFYHGG
Ga0126373_115084882	3300010048	Tropical Forest Soil	MVLKKPTTRRHMIRYKYASGYFLALLAFLMVSPSSRAQESSKTQDANKPMVFEGTVGGWRILEEGQPPAMIHATVEDMKRFREANPNARPGQVQAASTANDL
Ga0126373_120725241	3300010048	Tropical Forest Soil	MIPHKYALGCFLALLGLLIASPLSNAQEPKQEPNQPMVYEGTVGGLRVIEEGQPPVMIHA
Ga0134084_101301122	3300010322	Grasslands Soil	MIRKYALACFLAVLGFLLVSPLSHTQEQNKPMVFEGTVGGLRIIEEGQPPVMIHATVEDMTRFREANPHARPGQVQAASTANDL
Ga0126370_121232991	3300010358	Tropical Forest Soil	MIPRKYAPGRFLALLGFLMVSPLSHSQEPQKPMVYEGTVGGLRFLEEGQPPAMIHATVEDMKRFREANPH
Ga0126376_121145731	3300010359	Tropical Forest Soil	MIPHKCALGSALILAGFLLVSPLSHSQEPEQQKEPQRPMVYEGAPGGWRILEEGQPPAMIHATVEDMKRFHEANGNAHH
Ga0126378_115304062	3300010361	Tropical Forest Soil	YKYASGCFLALLGLMASPLSHAQGSPQELKPMVYEGTVGGLRLLEEGQPPAMIHATVDDMKRFHDANPHAQPGSLQAAST*
Ga0126378_116820492	3300010361	Tropical Forest Soil	MIPYKWAAGCLVTLMGLLIASPLSRAQEPQKPMVYEGSVGGLRILEEGQPPAMIHATV
Ga0126378_123414301	3300010361	Tropical Forest Soil	MIRYNLRTDHLVALLAFLMVSPLSQAQEPNQPMVYDGTVGGLRIIEEGQPPAMVHATVDDMKRFRQANPLALPGIVQPAAKSSELS*
Ga0126378_125230761	3300010361	Tropical Forest Soil	MIRYKYASGCFLALLAFLMVGPSSRAQDSNKTQEANKAMVFEGTVGGWRILEEGQPPAMIHATVEDMKRFREANPNARPGQVQAASTA
Ga0126379_120354901	3300010366	Tropical Forest Soil	MIPLKYASGGALALLGFLMVSPLTQAQEPEKDPQRPMVYEGAPGGWRILEEGQPPAMIHATVEDMKRFREAN
Ga0126381_1034754971	3300010376	Tropical Forest Soil	MIPNKYVPTCFLAFLGFLIASPFSNAQGPKQEPNQPMVYEGTVGGLRIIEEGQPPVIIHATVEDMRRFRDANPHARPGSVQAAGTSNELSYHGGTGGIG
Ga0126383_101587204	3300010398	Tropical Forest Soil	MVRFSRALGIVLSLLALLIASPLSRAQESDAQGPKQPMVYEGTVGGLRVIEEGQPPVMIHATLDDMKRFREAN
Ga0137392_104553072	3300011269	Vadose Zone Soil	MIRCEHASGCFLALLGFLAVSPLSHAQEPQQPMVYEGPVGGLRVIEEGQPPVMIHATMEQMKQFREANPNAR
Ga0137383_101497663	3300012199	Vadose Zone Soil	MIRKYAPACFLAVLGFLVVSPSSRAQEPNKAQEGNKQMVFEGTVGGWRIIEEGQPPVMIHATAEEMKRFREANPHARPG
Ga0137379_108692801	3300012209	Vadose Zone Soil	MGFLVVSPSSRAQEPNKAQEGNKPMVFEGTVGGWRIIEEGQPPVMIHATAEEMKRFREANPHARPGQVQAASTAND
Ga0137360_106263662	3300012361	Vadose Zone Soil	MIRCEYVSGCFLALLGLLAVSPLSNPQESKVPMVYEGTVGGLRHLEEGQPPAMIHATVDD
Ga0137397_101612463	3300012685	Vadose Zone Soil	MIRREHASGCFLALLGFLVVSPLSQAQEPQQPAVYEGPVGGLRIIEEGQPPVMIHAT
Ga0137395_104715711	3300012917	Vadose Zone Soil	MIRCEHASGCFLALLGFLAVSPLSHAQKPPQPMVYEGPVGGLRVIEEGQPPVMIHATMEQMKQF
Ga0137396_107086032	3300012918	Vadose Zone Soil	MIRKYAPAYFLAVLGFLVVSPSSRAQEANKAQGGNKPMLFEGTVGGWRIIEEGQPPVMIHATAEEMKRFREANPHAQSGQV
Ga0137394_113417551	3300012922	Vadose Zone Soil	MIRCEYVSGCFLALLGLLAVSPLSNPQEPKVPMVYEGTVGGLRHLEEGQPAVMIHATVEDMKRFRQANPNARPGSVQPASTSNDLYYHGGAG
Ga0137359_101345053	3300012923	Vadose Zone Soil	MIRSKYAPVCFVAVLGFLAFSPSSPAQEPKEPQQPQQPMVYEGTVGGLRVIEEGQPPVMIHATVEEMKQFREANPHARPGQVQAAGTANDLNY
Ga0137359_106774251	3300012923	Vadose Zone Soil	MIRREHASGCFLALLGFLVVSPLSQAQEPQQPAVYEGPVGGLRIIEEGQPPVMIHATTEQMKQFREANPNARPGSVHA
Ga0137413_112419841	3300012924	Vadose Zone Soil	MIRCEHASGCFLALLWFLAVSPLSHAQEPQQPMVYEGPVGGLRVIEEGQPPVM
Ga0137416_102913861	3300012927	Vadose Zone Soil	MIRREHVSGCFLALLGFLAVSPLSHAQEPKQPMVYEETVGGLRYLEEGQPPAMIHATVDDMKRFR
Ga0137416_120861522	3300012927	Vadose Zone Soil	MIRREHVSGCFLALLGFLAVSPLSRAQEPKQPMVYEETVGGLRYLEEGQPPAMIHATVDDMKRFR
Ga0126369_115533001	3300012971	Tropical Forest Soil	MIPRKYAPGRFLALLGFLMVSPLSHSQEPQKPMVYEGTVGGLRFLEEGQPPAMIHATVEDMKRFREANPHARPGVQAASTSSNLAYHG
Ga0126369_118121861	3300012971	Tropical Forest Soil	MIRYKYASGCFLALLAFLMVGPSSRAQDSNKTQEANKAMVFEGTVGGWRILEEGQPPAMIHATVEDMKRFREANPNARPGQVQAAS
Ga0134087_102006781	3300012977	Grasslands Soil	MRFHFASVCLVAVVVCMAVSPPSRAQEPNEPQQPAVYQGPVGGLRVIEEGQPPVMIHATTEQMKQFREANPKARHGSVRAASTSDDLFYH
Ga0137405_10907841	3300015053	Vadose Zone Soil	MIRLKFAAVCFVTALGFLMFSPSSRAQGPTASQPSQAQQPMVYEGTAGGLRVIEEGQPPVMIHATLEEMKRFREANPHARPSHGQAGRE
Ga0137409_107564571	3300015245	Vadose Zone Soil	MIRREHASGCFLALLGFLVVSPLSQAQEPQQPAVYEGPVGGLRVIEEGQ
Ga0182036_104316511	3300016270	Soil	MIRYKYALGCLVALLGLLVMSPSSDAQEPNNGQEPNKPMVYEGTVGGLRVIEEGQPPVMIHATVEDMKRFREANPHARPGQVQAANTSTTSDLTYRGGIGGIG
Ga0182033_103728942	3300016319	Soil	MILYKFVSGCFLAFLGFLMVSAFSHAQEPNKPMVYEGTVGGLRVFEEGQPPVMIHATVEDMKRFR
Ga0182032_107099012	3300016357	Soil	MIRYKYALGCLFALLGLLVTSPLADAQEPNNGQEPNKPMVYEGTVGGLRVIEEGQPPVMIHATVEDMKRFREANPH
Ga0182040_106757661	3300016387	Soil	MIRYKYALGCLFALLGLLVTSPLADAQEPNNGQEPNKPMVYEGTVGGLRVIEEGQPPVMIHATVEDMKRFREANPHARPGQVQAANTSTASDLTYRGGIG
Ga0182040_109954611	3300016387	Soil	MVRYKYALICVVAPLGFLMASRLSHAQEPNKPMVYEGTVGGLRVIEEGQPPAMIHATVEDMKRFRE
Ga0182037_107008831	3300016404	Soil	MIRYKYASGCYLALLAFLMVSPSSRAQESNKTQEANKPMVFEGTVGGWRILEDGQPPAMIHATVEDMKRFREANPNARP
Ga0182037_108706911	3300016404	Soil	MILYKFGSGCFLPFLGFLMVSAFSHAQEPNKPMVYEGTVGGLRVFEEGQPPVMIHATVEDMKRFRHTNPFAPSGSVQAASTSSELSYYGGTGGIGV
Ga0182037_120000151	3300016404	Soil	MGFLTVSPLSQAQEPQQPMVYEGTVGGLRFLEEGQPPAMIHATVDDMKRFREANPKARPGAVQAAGTASELDYHGGTG
Ga0182039_101351064	3300016422	Soil	MIRYKYASGCFLALLAFLMVGPSSRAQDSNKTQEANKAMVFEGTVGGWRILEEGQPPAMIHATVEDMKRFREANPNAR
Ga0182039_113001321	3300016422	Soil	MIRYKYASGCYLALLAFLMVSPSSRAQESNKTQEANKPMVFEGTVGGWRILEEGQPPAMIHATVEDMKRFREANPNAR
Ga0137408_11779091	3300019789	Vadose Zone Soil	MIRREHASGCFLALLGFLVVSPLSQAQEPQQPAVYEGPVGGLRVIEEGQPPVMIHATTEQMKQFREANPNARPGSVHAAATTNDLFYSRRDRWH
Ga0179592_102916381	3300020199	Vadose Zone Soil	MIRCEYVSGCFLALLGLLAVSPLSNPQEPKTPMVYEGTVGGLRHLEEGQPPAMIHAT
Ga0210403_109458461	3300020580	Soil	MIRCEHASGCFLALLGLLAVSPLSRAQEPKEPMVYEGTVGGLRHLEEGQPPAMIHATVDDMKRFR
Ga0210403_109823341	3300020580	Soil	MIRCEYASGCFLALLGLLAVSPLSNAQEPKEPMVYEGTVGGLRHLEEGQPPAMIHATVD
Ga0210406_111394372	3300021168	Soil	MIRCEHASGCFLALLGLLAVSPLSRAQEPKEPMVYEGTVGGLRHLEEGQPPAMIHATVDDMKRFREANPNARPGAVHPAGT
Ga0210387_110240982	3300021405	Soil	MIRCEYASGCFLALLGLLAVSPLSRAQEPKEPMVYEGTVGGLRHLEEGQPPAMIHATVDDMKRFRE
Ga0210410_102602153	3300021479	Soil	MIRCEHASGCFLALLGLLAVSPLSRAQEPKEPMVYEGTVGGLRHL
Ga0126371_100894111	3300021560	Tropical Forest Soil	MIRKYAPACILAVLGFLMVSSSSHAQQSNTAQEPNKPMVFEGTVGGWRIIEEGEPPAMIHATVEDMKRFREANPHARPGQVQAGSASELSYHGGIGGVGV
Ga0126371_101419852	3300021560	Tropical Forest Soil	MIRYKFASVCLVALLGFLVATPFSHAQEPNNAQEPNKPMVYEGTVGGLRFIEEGQPPVIIHAAVEDMKRFREDNAARPGASGQHRK
Ga0126371_104267671	3300021560	Tropical Forest Soil	MIPHKYVLRGALALAGFVLVSPLSHAQEPEKEPQRPMVYEGAPGGWRILEEGQPPAMIHATVEDMKR
Ga0247669_10044625	3300024182	Soil	MIRFHVAPVCSVAVLAVLASSPSSRAQEPNQQQPPVYQGPVGGLRVIEEGQPRVMIHATTEQMKQFREANPNARPGSVQAASTSND
Ga0137417_12603611	3300024330	Vadose Zone Soil	MIRREHVSGCFLALLGFLAVSPLSHAQERKQPMVYEETVGGLRDTLKRANRQR
Ga0209154_10530073	3300026317	Soil	MIPHKYALGAFLTLLGFLTVGPLSHAQEPQKPMVYEDTVGGLRILEEGQPSAMIHATVDDMKRFREANPHA
Ga0179593_11371162	3300026555	Vadose Zone Soil	MIRREHASGCFLALLGFLVVSPLSQAQEPQQPAVYEGPVGGLRVIEEGQPPS
Ga0209076_11600002	3300027643	Vadose Zone Soil	MIRCEHASGCFLALLGFLAVSPLSRAQEPKQPMVYEETVGGLRYLEEGQPP
Ga0209006_102599651	3300027908	Forest Soil	MIRREHAWGCFFALLGLLAVSPLSHAQEPKQQQPNQPMVYEGTVGGLRYLEEGQPPAMIHATVDDMKRFREANPNAKPGSVHSANTSS
Ga0137415_103172252	3300028536	Vadose Zone Soil	MIRREHVSGCFLALLGFLAVSPLSHAQEPKQPMVYEETVGGLRYLEEGQPPAMIHATVDDMKRFREANP
Ga0137415_105017102	3300028536	Vadose Zone Soil	MIRCEYVSGCFLALLGLLAVSPLSNPQEPKVPMVYEGTVGGLRHLEEGQPPAMIHATVDDMKRFREANP
Ga0170820_147565681	3300031446	Forest Soil	MIPYKYAPGCFLAVLGLLIASPLSSAQEPKQEPNQPMVYEGTVGGLRIIEEGQPPVIIHATVEDMKRFREANP
Ga0318541_105569111	3300031545	Soil	MIPNKYLPTCCLAFLGFLIASPFSNAQEPKQEPNQPMVFEGNPGGWKILEEGQPPAMVHATVEAMKK
Ga0306917_109240572	3300031719	Soil	MVRYKYALVCVVALLGFLMASPLSHAQEPNKPMVYEGTVGGLRVIEEGQPPAMIHATVEDMKRFREANPHAQPGQVQAAST
Ga0318493_107740441	3300031723	Soil	MIRYKYASGCFLALLAFLMVGPSSRAQDSNKTQEANKAMVFEGTVGGWRILEEGQPPAMIHATVEDMKRFREANPNARPGQVQ
Ga0307475_101184221	3300031754	Hardwood Forest Soil	MIRFKFAPVCFVAVLGFLASIPASRAQESNQPQQPMIYEGTVGGLRVIEEGQPPVMIHATAEEMKRFREANPNARPGQVQAASTANDIFYHGGVAGI
Ga0307475_106018542	3300031754	Hardwood Forest Soil	MIRREHASGWFLVLLGFLAVSPLSHAQEPKQPMVYEGTVGGLRHLGEDQPPAMIHATVDDMKRFREANPDARPGVVQSASTSSELY
Ga0318508_11666281	3300031780	Soil	MIRYKCVSGCFLPLLGFLMVSPLSHAQAPNKPMVYEGTVGGLRLIEEGQPPVMIHATVEDMKRFREANPHVRPGQLQAASTANDL
Ga0318523_100898003	3300031798	Soil	MIRYKCVSGCFLPLLGFLMVSPLSHAQAPNKPMVYEGTVGGLRLIEEGQPPVMIHATVEDMKRFREANPHVRPGQLQAAS
Ga0307478_114627831	3300031823	Hardwood Forest Soil	MIRREHTSGCFLALLGFLVVSPLCHAQEPQEPNQKMVYEGTVGGLRHLEEGQTPAMIHATVDDMKRFREANPSARPGVVQSAGTASDLSYHGGA
Ga0310917_104443761	3300031833	Soil	MILYKFGSGCFLPFLGFLMVSAFSHAQEPNKPMVYEGTVGGLRVFEEGQPPVMIHATVEDMKRFRHT
Ga0306919_103462482	3300031879	Soil	MIRYKYASGCFLALLAFLMVGPSSRAQDSNKTQEANKAMVFEGTVGGWRIIEEGQPPAMIHATVEDMKRFREANPNARPGQVQAAITANDLS
Ga0306919_111142691	3300031879	Soil	MIRYKCVSGCFLPLLGFLMVSPLSHAQAPNKPMVYEGTVGGLRLIEEGQPPVMIHATVED
Ga0306925_121742271	3300031890	Soil	MILYKFGSGCFLPFLGFLMVSAFSHAQEPNKPMVYEGTVGGLRVFEEGQPPVMIHATVEDMKRFRHTNPF
Ga0318520_108859042	3300031897	Soil	MIRYKHAPGCFLALMGFLTVSPLPQAQEPQQPMVYEGTVGGLRFLEEGQPPAMIHATVDDMKRFHEANAHAR
Ga0306923_102142153	3300031910	Soil	MTRYKCVSVCLVALLGFLMTSPSSHAQEPAKPMVYEGTVGGLRVIEEGQPPVMIHATVEDMKRFREANPHARPGQVQAANTSTTSDLTYRGGIGGI
Ga0306923_103881362	3300031910	Soil	MIRYKYASGCYLALLAFLMVSPSSHAQESSKTQEANKPMVFEGTVGGWRILEEGQPPAMIHATVEDMKRFR
Ga0310916_115803321	3300031942	Soil	MILYKFGSGCFLPFLGFLMVSAFSHAQEPNKPMVYEGTVGGLRVFEEGQPPVMIHATVEDMKRFRHTNPFAPSGSVQAASTS
Ga0306926_105226301	3300031954	Soil	MIRHKYVFAWLFFALLGLLPVSLLSQAQEPNKPMVYEGTVGGLRVIEEGQPPVIIHATVEDMKRFREANPQARPGQVQSASTANDLTYHGG
Ga0307479_103680611	3300031962	Hardwood Forest Soil	MIRREHASGCFLALLGFLVVSPLCHAQEPQEPNQKMVYEGTVGGLRHLEEGQPPALIHATVDDMKRFREANPNARP
Ga0307479_109328481	3300031962	Hardwood Forest Soil	MIRREHASGCFLALLGFLVVSPLCHAQEPQEPNQPMVYEGTVGGLRHLEEGQPPAMIHATVEDMKRF
Ga0307479_115469381	3300031962	Hardwood Forest Soil	MIRREHASGCFLALLGFLAVSPLSHAQEPQEPQQPMVYEGPVGGLRVIEEGQPPVMIHATMEQMKQFREANPNARPGSVQAAATTNDL
Ga0306922_111843401	3300032001	Soil	MIRYKYALGCLFALLGLLVTSPLADAQEPNNGQEPNKPMVYEGTVGGLRVIEEGQPPVMIHATVEDMKRFREANPHAQPGQVQVQAANTSITND
Ga0318533_106308131	3300032059	Soil	MILYKFGSGCFLPFLGFLMVSAFSHAQEPNKPMVYEGTVGGLRVFEEGQPPVMIHATVEDMKRFRH
Ga0318504_103254001	3300032063	Soil	MIPNKYLPTCFLAFLGFLIASPFSNAQEPKQEPNQPMVYEGTVGGLRIIEEGQPPVIIHATVEDMRRFREANPHARPGSVQAAGTSNDLTY
Ga0306924_113404481	3300032076	Soil	MILYKFGSGCFLPFLGFLMVSAFSHAQEPNKPMVYEGTVGGLRVFEEGQPPVMIHATVEDMKRFRHTNPFAPSGSVQPASTSSELSY
Ga0306924_124105641	3300032076	Soil	MVRYKYALVCVVALLGFLMASPLSHAQEPNKPMVYEGTVGGLRVIEEGQPPAMIHATVEDMKRFREANPHAQPGQVQAASTANDLTFHGGTGGIG
Ga0318540_106653431	3300032094	Soil	MVRYKYALVCVVALLGFLMASPLSHAQEPNKPMVYEGTVGGLRVIEEGQPPAMIHATVEDMKRFRETNPHAQPGQVQAASTTNDLTFHGGTGGIG
Ga0307470_106924142	3300032174	Hardwood Forest Soil	MIRSKFAPVCFVAVLGFLASSSSSRGQEPSQPQQPMVYEDTVGGLRVIEEGQPPVMIHATLDEMKRFRETHPNARPGQVQAASTANDLS
Ga0306920_1028777161	3300032261	Soil	MIRYKYALGCLVALLGLLVMSPSSDAQEPNNGQEPNKPMVYEGTVGGLRVIEEGQPPVMIHATVEDMK
Ga0310914_101694272	3300033289	Soil	MVRYKYALICVVAPLGFLMASRLSHAQEPNKPMVYEGTVGGLRVIEEGQPPAMIHATVEDMKR
Ga0310914_107243811	3300033289	Soil	MILYKFGSGCFLPFLGFLMVSAFSHAQEPNKPMVYEGTVGGLRVFEEGQPPVMIHATVEDMKRFRRAN
Ga0310914_113106811	3300033289	Soil	MIRYKYALGCLVALLGLLVMSPSSDAQEPNNGQEPNKPMVFEGTVGGWRILEEGQPPAMIHATVEDMQRFREANPNARHEPES
Ga0318519_100193183	3300033290	Soil	MIPNKYLPTCFLAFLGFLIASPFSNAQEPKQEPNQPMVYEGTVGGLRIIEEGQPPVIIHATVEDMRRFREANPHARPGSVQAAGTSNDLTYH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089967

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences