Metagenome Family F089971

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089971
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	121 residues
Representative Sequence	MKTITSRVARAERPLLLAGLALVTVHLLDLALSGPDTSALGVAVIVAVAAAWALAQPHVTRPTRFALGVVVGLVAIGFGVVSHGLHVVNSGPDWRDVTGV
Number of Associated Samples	88
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	53.61 %
% of genes near scaffold ends (potentially truncated)	87.04 %
% of genes from short scaffolds (< 2000 bps)	85.19 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.185 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.926 % of family members)
Environment Ontology (ENVO)	Unclassified (39.815 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.704 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.62% β-sheet: 0.00% Coil/Unstructured: 34.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF02687	FtsX	28.70
PF12704	MacB_PCD	5.56
PF02979	NHase_alpha	4.63
PF00561	Abhydrolase_1	4.63
PF00005	ABC_tran	1.85
PF00702	Hydrolase	1.85
PF02211	NHase_beta	0.93
PF07730	HisKA_3	0.93
PF12697	Abhydrolase_6	0.93
PF00009	GTP_EFTU	0.93
PF13669	Glyoxalase_4	0.93
PF03706	LPG_synthase_TM	0.93
PF00571	CBS	0.93
PF04237	YjbR	0.93
PF03466	LysR_substrate	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.93
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.93
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.93
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.93
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.93
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
All Organisms	root	All Organisms	39.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
cellular organisms	root	All Organisms → cellular organisms	39.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	27.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.70 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	22.22 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.48 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5.56 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5.56 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.85 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.93 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.93 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	3.70 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.85 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.93 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.93 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.93 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.93 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	2.78 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.85 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	0.93 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.93 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.93 %
Actinokineospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora	0.93 %
Burkholderia cepacia complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex	0.93 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	2.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.85 %
Frankia elaeagni	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia elaeagni	0.93 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.93 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.93 %
Solirubrobacter pauli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	0.93 %
Burkholderia pyrrocinia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia pyrrocinia	0.93 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.93 %
Actinokineospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora	0.93 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.19 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	2.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.85 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.93 %
Frankia elaeagni	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia elaeagni	0.93 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.93 %
Solirubrobacter pauli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	0.93 %
Burkholderia pyrrocinia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia pyrrocinia	0.93 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.93 %
Actinokineospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora	0.93 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_104725432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora	545	Open in IMG/M
3300004479\|Ga0062595_102247535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia elaeagni	536	Open in IMG/M
3300005327\|Ga0070658_10825013	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300005331\|Ga0070670_100414879	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300005332\|Ga0066388_105685641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	631	Open in IMG/M
3300005338\|Ga0068868_100610268	All Organisms → cellular organisms → Bacteria → Proteobacteria	967	Open in IMG/M
3300005344\|Ga0070661_101621858	Not Available	547	Open in IMG/M
3300005345\|Ga0070692_11187985	Not Available	542	Open in IMG/M
3300005354\|Ga0070675_101336626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300005366\|Ga0070659_100843119	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	799	Open in IMG/M
3300005441\|Ga0070700_100033952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	3077	Open in IMG/M
3300005456\|Ga0070678_101432501	Not Available	646	Open in IMG/M
3300005535\|Ga0070684_101604961	Not Available	613	Open in IMG/M
3300005544\|Ga0070686_101190295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia pyrrocinia	633	Open in IMG/M
3300005616\|Ga0068852_101367552	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300005719\|Ga0068861_101542245	Not Available	653	Open in IMG/M
3300005843\|Ga0068860_100773529	All Organisms → cellular organisms → Bacteria → Proteobacteria	973	Open in IMG/M
3300006894\|Ga0079215_11191250	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300007004\|Ga0079218_12204824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300009094\|Ga0111539_10298555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1875	Open in IMG/M
3300009098\|Ga0105245_10639646	Not Available	1093	Open in IMG/M
3300009098\|Ga0105245_11482900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300009098\|Ga0105245_12226426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	602	Open in IMG/M
3300009100\|Ga0075418_12956064	Not Available	518	Open in IMG/M
3300009148\|Ga0105243_10014149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	6035	Open in IMG/M
3300009156\|Ga0111538_13680623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300009176\|Ga0105242_10682227	Not Available	1003	Open in IMG/M
3300009176\|Ga0105242_12811479	Not Available	537	Open in IMG/M
3300009553\|Ga0105249_11008209	Not Available	901	Open in IMG/M
3300009789\|Ga0126307_10483241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	999	Open in IMG/M
3300009789\|Ga0126307_11066511	Not Available	653	Open in IMG/M
3300009789\|Ga0126307_11067883	All Organisms → cellular organisms → Bacteria → Terrabacteria group	653	Open in IMG/M
3300010037\|Ga0126304_10706451	All Organisms → cellular organisms → Bacteria → Terrabacteria group	681	Open in IMG/M
3300010040\|Ga0126308_10508563	All Organisms → cellular organisms → Bacteria → Terrabacteria group	814	Open in IMG/M
3300010041\|Ga0126312_10185013	Not Available	1453	Open in IMG/M
3300010041\|Ga0126312_11398621	Not Available	519	Open in IMG/M
3300010044\|Ga0126310_10202794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1306	Open in IMG/M
3300010044\|Ga0126310_10699675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	768	Open in IMG/M
3300010045\|Ga0126311_11516864	Not Available	562	Open in IMG/M
3300010166\|Ga0126306_10007965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	6558	Open in IMG/M
3300010373\|Ga0134128_11828155	Not Available	668	Open in IMG/M
3300011119\|Ga0105246_10545479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	993	Open in IMG/M
3300011119\|Ga0105246_10591571	Not Available	957	Open in IMG/M
3300012358\|Ga0137368_10479673	Not Available	804	Open in IMG/M
3300012507\|Ga0157342_1072278	Not Available	527	Open in IMG/M
3300012951\|Ga0164300_10119769	Not Available	1187	Open in IMG/M
3300012961\|Ga0164302_10611056	Not Available	792	Open in IMG/M
3300012961\|Ga0164302_11383487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	573	Open in IMG/M
3300014325\|Ga0163163_12893550	Not Available	536	Open in IMG/M
3300015373\|Ga0132257_100696413	Not Available	1262	Open in IMG/M
3300018028\|Ga0184608_10304264	Not Available	701	Open in IMG/M
3300018422\|Ga0190265_10655596	Not Available	1170	Open in IMG/M
3300018422\|Ga0190265_12392795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	628	Open in IMG/M
3300018422\|Ga0190265_13420479	Not Available	529	Open in IMG/M
3300018429\|Ga0190272_10169421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1533	Open in IMG/M
3300018429\|Ga0190272_10429704	Not Available	1091	Open in IMG/M
3300018432\|Ga0190275_10541167	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300018466\|Ga0190268_11876622	Not Available	544	Open in IMG/M
3300018469\|Ga0190270_10354036	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300018469\|Ga0190270_10751307	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300018469\|Ga0190270_10927913	Not Available	891	Open in IMG/M
3300018469\|Ga0190270_11198433	Not Available	797	Open in IMG/M
3300018469\|Ga0190270_12723273	Not Available	557	Open in IMG/M
3300018476\|Ga0190274_12338658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	631	Open in IMG/M
3300018939\|Ga0193593_1065467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	919	Open in IMG/M
3300020005\|Ga0193697_1137494	All Organisms → cellular organisms → Bacteria → Terrabacteria group	553	Open in IMG/M
3300025901\|Ga0207688_10244116	Not Available	1086	Open in IMG/M
3300025923\|Ga0207681_10153640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1728	Open in IMG/M
3300025926\|Ga0207659_10298151	Not Available	1323	Open in IMG/M
3300025927\|Ga0207687_11034346	Not Available	705	Open in IMG/M
3300025933\|Ga0207706_11502067	Not Available	549	Open in IMG/M
3300025934\|Ga0207686_11113334	Not Available	644	Open in IMG/M
3300025937\|Ga0207669_11956260	Not Available	501	Open in IMG/M
3300025940\|Ga0207691_11381382	Not Available	579	Open in IMG/M
3300025961\|Ga0207712_10553735	Not Available	989	Open in IMG/M
3300026121\|Ga0207683_11263453	Not Available	684	Open in IMG/M
3300026142\|Ga0207698_10084028	Not Available	2579	Open in IMG/M
3300027907\|Ga0207428_10718197	All Organisms → cellular organisms → Bacteria → Terrabacteria group	714	Open in IMG/M
3300028596\|Ga0247821_10247487	Not Available	1070	Open in IMG/M
3300028771\|Ga0307320_10429496	Not Available	531	Open in IMG/M
3300028778\|Ga0307288_10063052	Not Available	1297	Open in IMG/M
3300028782\|Ga0307306_10201182	Not Available	570	Open in IMG/M
3300028791\|Ga0307290_10172621	Not Available	792	Open in IMG/M
3300028812\|Ga0247825_10193103	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300028885\|Ga0307304_10338225	Not Available	671	Open in IMG/M
3300030006\|Ga0299907_10038393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	3756	Open in IMG/M
3300031228\|Ga0299914_10404429	Not Available	1191	Open in IMG/M
3300031229\|Ga0299913_10364957	Not Available	1432	Open in IMG/M
3300031229\|Ga0299913_10624933	Not Available	1058	Open in IMG/M
3300031731\|Ga0307405_11140592	All Organisms → cellular organisms → Bacteria → Terrabacteria group	672	Open in IMG/M
3300031824\|Ga0307413_11061599	Not Available	697	Open in IMG/M
3300032002\|Ga0307416_103114681	Not Available	555	Open in IMG/M
3300032080\|Ga0326721_10799406	Not Available	591	Open in IMG/M
3300032126\|Ga0307415_102059388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	557	Open in IMG/M
3300032126\|Ga0307415_102572487	Not Available	502	Open in IMG/M
3300033550\|Ga0247829_11492428	Not Available	558	Open in IMG/M
3300033551\|Ga0247830_10612606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	862	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.26%
Host-Associated	Host-Associated	40.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.41%
Plants	Host-Associated → Plants	40.74%
Aquatic	Environmental → Aquatic	1.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.11%
Sediment	Environmental → Aquatic → Sediment	1.85%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.44%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.33%
Loam	Environmental → Terrestrial → Soil → Loam	4.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.85%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.85%
Sand	Environmental → Terrestrial → Soil → Sand	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.70%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	11.11%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	9.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018939	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1047254321	3300000956	Soil	MSTIARLERPLLLAGLALVTAHLLDLALSGPDTSVLGILVILAVPVAWALVQPHITRPTRLALGVVIGLVAVGFGVASHGLHVVNSGPDWRDVTGVGYVI
Ga0062590_1017347941	3300004157	Soil	MKTIPSRAARAERPLLLAGLALVTAHLLDLALSGPDTSLLGAAVIVALAAGWALAQPHVTRPTRLALGVVVGLVVLVFGVISHGLHVVNSGPDWRDLTGVGYIAGGLLLVAAGIAAIAAPRRAPSRTGLGWRGAHAIGWLAG
Ga0062595_1022475351	3300004479	Soil	MKTIPSRAARAERPLLLAGLALVTAHLLDLALSGPDTSLLGAAVIVALAAGWALAQPHVTRPTRLALGVVVGLVVLVFGVISHGLHVVNSGPDWRDLTGVGYIAGGLLLVAAGIA
Ga0070658_108250132	3300005327	Corn Rhizosphere	MTATVTAPRSVATPPPGRSRARRARIERPLLLLGLALVALHLLDLSFSGPDTSVVGVLSILAVPTAWALAQPHVARPTRLLLGVAIGLLTLGFGVVSHGLHIVNSGPDATDVTGVGMIAGGLLLVA
Ga0070670_1004148792	3300005331	Switchgrass Rhizosphere	MSATLGQPTAPPRTRRGGRGARLARLERPLLAAGLALVAAHLLDLALSGPATAWWGVLGIVSLPAAWYGLQPRLIRPTRFALALAVGLLALGFGVVSHGLHTVNNGPDWRDLTGL
Ga0066388_1056856411	3300005332	Tropical Forest Soil	MTTIARLERPLLFAGLALVTAHLLDLAFSGPDTSVLGILVIMAVPLAWALAQPRVTRPTRLALGVVVGLVVIGFGVASHGLHVVNSGPDWRDVTGVGYVIGGLLLVAAGLAAIAAPRRAGARSG
Ga0068869_1011271491	3300005334	Miscanthus Rhizosphere	MKTITSRVARAERPLLLAGLALVTVHLLDLALSGPDTSVLGVAVIVAVAAVWALAQPHVTRPTRFALGVVVGLVAIGFGVVSHGLHVVNSGPDWRDVTGVGYIAGGLLLVAAGIAATATPRRAPRRSGLGWRGAHALGWLA
Ga0068868_1006102682	3300005338	Miscanthus Rhizosphere	MPLIPSSGARPRSPRRARLARAERPLLLAGLALVTAHLLDLALSGPATSWLGVAAILALPAAWALAQPHVTRPTRVALGVSIGAVALGFGVVSNGLHVVNSGPDWRD
Ga0070661_1016218581	3300005344	Corn Rhizosphere	MPLIPSSGARPRGPRRARLARAERPLLLAGLALVTAHLLDLALSGPATSWLGVAAILALPAAWALAQPHVTRPTRVALGVSIGAVALGFGVVSNGLHVVNSGPDWRDLTGVGYAVGGLLLIAAAVAA
Ga0070692_111879851	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MPLIPSSGARPRGPRRARLARAERPLLLAGLALVTAHLLDLALSGPATSWLGVAAILALPAAWALAQPHVTRPTRVALGVSIGAVALGFGVVSNGLHVVNSGPDWRDL
Ga0070675_1013366262	3300005354	Miscanthus Rhizosphere	MSATVQRSAAPPRSRRGGRLARLERPLLAGGLALVSAHLLDLAISGPATAWWGVLAILAFPAAWFALQPRLIRPTRFALGLVVGLLAIGFGVVSHGLHVVNSGPDWRDLTGVGMVFGGVLLLGSAVAALAAP
Ga0070659_1008431191	3300005366	Corn Rhizosphere	MSATVQRSHAPPRSRRGGRLARLERPLLAGGLALVSAHLLDLAISGPATAWWGVLAILAFPAAWFALQPRLIRPTRFALGLIVGLLAVGFGVVSHGLHVVNSGPDWRDLT
Ga0070700_1000339521	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MSATVQRSHASPRSRRGSRLARLERPLLAGGLALVSAHLLDLAISGPATAWWGVLAILAFPAAWFALQPRLIRPTRFALGLLVGLLAIGFGVVSHGLHVVNSGPDWRDLTGVGMVL
Ga0070678_1014325012	3300005456	Miscanthus Rhizosphere	MSAIHQASAPPRMRRGGGRARSGRDGRRARLARFERPLLAAGLALVAAHLLDLSVSGPATAWWGVLAILALPAAWFALQPRLIRPTRFGLALPTGLLAIGFGAVSHGLHVVNSGPDWRDVSGVGMIL
Ga0070684_1016049611	3300005535	Corn Rhizosphere	MSATHQASAPPRMRRGGGRARSGRDGRRARLARFERPLLAAGLALVAAHLLDLSVSGPATAWWGVLAILALPAAWFALQPRLIRPTRFGLALPTGLLAIGFGAVSHGLHVVNS
Ga0070686_1011902951	3300005544	Switchgrass Rhizosphere	MAAPATGRDAWDMPSIPSAGARPRDPRRARLARAERPLLLAGLALVTAHLLDLALSGPATSWLGVAVILALPAAWGLAQPHVTRPTRVALGVSIGAVALGFGVVSHGLHVVNSGPDWRDLTGVGYA
Ga0068856_1010556602	3300005614	Corn Rhizosphere	MTTATRQPEGAQAPPVPGPVEAPRRGRRERLARAERPLLLAGLALVAAHLLDLAFSGPDTSALGVAAIVALATAWALAQPHVTRPTRVALGVVVGLLAVGFGVISHGLHVINSGPDWRDLTGVGYIAGGLLLVAAGIAATAAPRRVPSRT
Ga0068852_1013675521	3300005616	Corn Rhizosphere	MKTIPSRAARAERPLLLAGLALVTAHLLDLALSGPDTSLLGAAVIVALAAGWALAQPHVTRPTRLALGVVVGLVVLVFGVISHGLHVVNSGPDWRDLTGVGYIAGGLLL
Ga0068861_1015422451	3300005719	Switchgrass Rhizosphere	MTFTAVEPAPSTPRPEATAQPRWRSRIASLERPLLLVGLALITAHLLDLAFSGPATSAPAIVAILAVAAGWAVAQPRLSRATRLGLGISVGLLATGFGVVSHGLHVVNSGPDWRDVTGVGMALGGIALVASGLAALA
Ga0068860_1007735291	3300005843	Switchgrass Rhizosphere	MPLIPSSGARPRGPRRARLARAERPLLLAGLALVTAHLLDLALSGPATSWLGVAAILAVPAAWALAQPHVTRPTRVALGVSIGAVALGFGVVSNGPHVVNSGPDWRDL
Ga0079215_111912502	3300006894	Agricultural Soil	MSALLQSPPAPSHARRGGRGRLARLERPLLAGGLALIAVHLLDLAISGPDTVVLGVAGIVAVPAAWYALQPRLIRPTRFGLALIAGLLAFGFGVVSHGFHVVNSGPDWRDL
Ga0079218_122048241	3300007004	Agricultural Soil	MTATLAPAPPQQRRGGRGRVAGLERPLLAGALALVTSHLLDLAFSGPHTWLLAIAGILAVPLAWWFAQPHVTRPTRFGLGLVVGLLSIGFGVASHGLHVVNSGPDRYDITGIAM
Ga0111539_102985551	3300009094	Populus Rhizosphere	MTATLAPAPPRTRRGARGRIAGLERPLLAGGLALVTIHLLDLAFSGPHTWLLAIAGILATPLAWWFAQPHVTRPTRFGLGLVVGLLSIGFGVASHGLHVVNSGPDRYDVTGVAMILGG
Ga0105245_106396461	3300009098	Miscanthus Rhizosphere	MAAPATGRDAWDMPSIPSAGARPRDPRRARLARSERPLLLAGLALVTAHLLDLALSGPATSWLGVAVILALPAAWGLAQPHVTRPTRVALGVSIGAVALGFGVVSHGLHVVNSGPDWRDLTGVGYAAGGLLLIAAAVA
Ga0105245_114829001	3300009098	Miscanthus Rhizosphere	MSATVQRSHAPPRSRRGGRPARLERPLLAGGLALVSAHLLDLAISGPATVWWGVLAILAFPAAWFALQPRLIRPTRFALGLVVGLLAVGFGVVSHGLHVVNSGPDWRDLTGVGLIAGGLLLVAAGLSAL
Ga0105245_122264261	3300009098	Miscanthus Rhizosphere	MTATAPTPVSPLSRRDGARRRLARWERPLLAGGLALVTLHLLDLAFSGPDTAVLGVLAIVVVPAAWLAAQPHLIRPSRFALGLFAGLLALGFGVVSHG
Ga0075418_129560641	3300009100	Populus Rhizosphere	VTTTAPRPVTAPPLQRRGRRRERIARLERPLLLTGLALVTLHLLDLAFSGPATTVLGVLVIVAVPAAWALAQPQMVRPTRVLLGIAVGLLSFGFALISHVLHVVNSGLDVRDLTGI
Ga0105243_100141498	3300009148	Miscanthus Rhizosphere	MVAPATGRDAWDMPSIPSAGARPRDPRRARLARAERPLLLAGLALVTAHLLDLALSGPATSWLGVAVILALPAAWGLAQPHVTRPTRVALGVSIGAVALGFGVVSHGLHVVNSGPDWRDLTGVGYAAGGLLLIAAAVAAA
Ga0111538_136806231	3300009156	Populus Rhizosphere	MSAVLDRATAPPRTRRGGSLARLERPLLAGGLALVAAHLLDLAISGPDTAWWGVLAILAFPALWYALQPRLIRPTRLGLALAVGLLAIGFGVVSHGLHAVNSGPDWRDLTGVGMA
Ga0105242_106822272	3300009176	Miscanthus Rhizosphere	MSAIHQASAPPRMRRGGGRARSGRDGRRARLARFERPLLAAGLALVAAHLLDLSVSGPATARWGVLAILALPAAWFALQPRLIRPTRFGLALPTGLLVIGFGAVSHGLHVVNSG
Ga0105242_128114792	3300009176	Miscanthus Rhizosphere	VTAIRPVRAAAGADGRRLARLERPLLAGGLALVAIHLLDLAISGPATTVWGVAGIVALPALWVALQPRLLRPTRFGLALVVGLLAIGFGVVSHGLHVVNNGPD*
Ga0105249_110082092	3300009553	Switchgrass Rhizosphere	MKTITSRVARAERPLLLAGLALVTVHLLDLALSGPDTSALGVAVIVAVAAAWALAQPHVTRPTRFALGVVVGLVAIGFGVVSHGLHVVNSGPDWRDVTGV
Ga0126307_104832411	3300009789	Serpentine Soil	MTATLSDPRFSVPRLTRADGGRRARIAGLERLLLLAGLALVALRLLDLAFSGPDTSLLGVLAIVAVPAVWALARPHVTRPTRLVLGVVIGLLTIGFGVVSHGLHVVNSGPDWTD
Ga0126307_110665111	3300009789	Serpentine Soil	MTATLSDPRFRVPRLTAADGGRRARIAGLERLLLLAGLALVALHLLDLAFSGPDTSLLGVLAIVAVPAVWALAQPHVTRPTRLVLGVVIGLLTIGFGVVSHGLHVVNSGPDWTD
Ga0126307_110678832	3300009789	Serpentine Soil	LERPLRAAGLALVTAHLLDFSLSGPHTTLPGLLAIIAAPLGWLLAQPHATRPTRLALAVTVGLLAVGFGTVSHGLHVVNSGPDLRDVTGVAFIFGGLLLAASG
Ga0126304_107064511	3300010037	Serpentine Soil	VTTSITAPRTAAAPPSGRSRARLARLERPLLLAGLALVALHLLDLALSGPDTSIFGVLGIVAVPAAWALAQPHVTRPTRLLLGVLIGLLTLGFGVVSHGLHVVNSGPAWADVTGVGMIAGGL
Ga0126308_105085632	3300010040	Serpentine Soil	MTATITTPRRVAAPPSGRSRARLARVERPLLLAGLCLIALHLLDLALSGPQTSIFGVLGIVAVPAAWALAQPHVTRPTRLVLGIVIGLMTLGFGVVSHGLHVMNSGPAWADVTGVGMIAGGQLLIVSGLAAIAAPRR
Ga0126312_101850131	3300010041	Serpentine Soil	VTTSITAPRTAAAPPSGRSRARLARLERPLLLAGLALVALHLLDLALSGPGTSIFGVLGIVALPAAWALAQPHVTRPTRLVLGVVIGLLTFGFGVVSHGLHVVNSGPAWADVT
Ga0126312_113986211	3300010041	Serpentine Soil	MTSILLDDPPQAAPAPRRPRRPRERVTRLERPLLVAGLALFTAHLLDLAISGPATTVLGVVVILALPVAWTLAQGRVTRPTRMALGVAIGLVAVGFGVTSHGLHVVHSGFDWRDLTGVGYIVGGLLLAA
Ga0126310_102027942	3300010044	Serpentine Soil	MPSTLLEPVRPERPTRLASARRRIAGLERPLLLAGLALLTAHLLDLSISGAATTLPGLAVIVGLPLAWLAAQPRVTRPTRVALAVVVGLLAAGFGVASHGLHVVNSGADWRDLTGVGYIAGGLLLALSGLSAIAA
Ga0126310_106996752	3300010044	Serpentine Soil	MTATATIPAPSHTRRGGRRAGLARLERPLLAAGLGLVAVHLLDLAISGPDTAVLGVAGILAVPAAWIALQPRLIRPTRFALALLVGLLATGFGVVSHGLHVVHSGPDWRDLTGLGMVA
Ga0126311_106906261	3300010045	Serpentine Soil	MPTTVLEPARHEPASAPASSHRRRWRQRIARLERPLLLAGLALFTAHLLDLSVSGPATTVLGVLVILALPAAWAFAQPRVTRPTRMVLGVVVGLVAVGFGVASHGLHVVNSGPDWRDLTGVGYVVGGLLLVLSGLTAAAVPRRAPRRRGLGW
Ga0126311_115168641	3300010045	Serpentine Soil	MPSIAPARRRRRERVAQLERPLLLAGLALVTAHLLDLALSGPATSVLGVLTIVAVPAAWALAQPRLTRPTRLALGVVIGLLAAGFGATSHGLHIVNSGFDWRDASGIGSLVGGLLLMASG
Ga0126306_100079651	3300010166	Serpentine Soil	MSATVSPAPPHVRRGGRRARLPRLERPLLAAGLALVTAHLLDLSLSGPHTTLLGLLAIIAAPLAWLLAQPHATRPTRLALAVTVGLLAVGFGTVSHGLHVV
Ga0134128_118281552	3300010373	Terrestrial Soil	MVAPATGRDAWDMPSIPSAGARPRDPRRARLARAERPLLLAGLALVTAHLLDLALSGPATSWLGVAVILALPAAWGLAQPHVTRPTRVALGVSIGAVALGFGVVSHGLHVVNSGPDWRDL
Ga0105246_105454792	3300011119	Miscanthus Rhizosphere	MSAIHQASAPPRLRRGGGRARSGRDGRRARLARFERPLLAAGLALVAAHLLDLSVSGPATAWWGVLAILALPAAWFALQPRLIRPTRFGLALPTGLLAIGFGAVSHGLHVVNSGPDWRDV
Ga0105246_105915711	3300011119	Miscanthus Rhizosphere	MPSIPTAGAPPRGPRRARLARAERPLLLAGLALVTAHLLDLALSGPATSWLGVAVILALPAGWALAQPHVTRPTRMALGVAIGAVALGFGVVSHGLHVVNSGPDWR
Ga0137368_104796732	3300012358	Vadose Zone Soil	MSATLAPAPPLVRRGGGRRDRLARLARPLLLAGLALVTLHLLDLALSGPDTALLGVLVIVAVPLVWLRAQPHVTRPTRLALAVAVGLLAFGFGAVSHGLHVTSLDEPSVPMRSEATEVSAWRL*
Ga0157355_10257372	3300012493	Unplanted Soil	MRAVRDREGMTTAIREPETATAPPVARPDAPPRRNRRERLARAERPLLLAGLALVVAHLLDLAFSGPDTSALGVAAIVAVAAAWALAQPHVTRPTRVALGVVVGLVAVGFGVV
Ga0157342_10722781	3300012507	Arabidopsis Rhizosphere	MTPITLDPERAEAQPGPVAPTVPTAPRRRWRERIARAERPLLLTGLALVTAHLLDLAFSGPDTSAIGVAVIVAVAATWALAQPHVTRPTRLALGVVVGLVVLVFGVISHGLHVVNS
Ga0164300_101197691	3300012951	Soil	MPSIPSSAHPRGPRRARLAGAERPLLLAGLALVTAHLLDLALSGPATSWLGVAVILALPAAWALAQPHVTRPTRLVLGVVVGLLAIGFGVVSHGLHVVNSGPDWR
Ga0164302_106110562	3300012961	Soil	MTLTSDRTTARNARERVAALERPLLLAGLALVTAHLLDLALSGPATSVLGVLAIVAVPVAWALAQPRVTRPTRVVLGLMIGLVAIGFGVASHGLHVVNSGPDWRDLTGVGFALGGLLLVAAGAAAGTA
Ga0164302_113834871	3300012961	Soil	MKTITSGAARAERPLLLAGLALVTAHLLDLALSGPDTSLLGVVVIVALAAAWALAQRHVTRPTRLALGVVVGVVVVFFGVISHGLHVVNSGPDWRDGTG
Ga0164309_102067322	3300012984	Soil	MTLTSDRTTARNARERVAALERPLLVAGLALVTAHLLDLALSGPATTVLGVLAIVAVPVAWALAQPRVTRPTRVVLGLTIGLVAIGFGVASHGLHVVNSGPDWRDVTGVGYVVGGLLLVASALAAAVAPGRPPRRRALPWRAA
Ga0163163_128935501	3300014325	Switchgrass Rhizosphere	MTATVTAPRSVATPPPGRSRARRARSERPLLLLGLALVALHLLDLSFSGPDTSVVGVLSILALPTAWALAQPHVARPTRLLLGVAIGLPTLGFGVVSHGLHIVNSGPDATDVTGVGMIAG
Ga0132257_1006964133	3300015373	Arabidopsis Rhizosphere	MTPITLDPERAEAQPGPVAPTAPTAPRRRWRERIARAERPLLLTGLALVTAHLLDLAFSGPDTSAIGVAVIVAIAATWALAQPHVTRPTRLALGVVVGLVVLVFGVISHGLHVVNSGPDW
Ga0184608_103042641	3300018028	Groundwater Sediment	MTPIALDPVRAEAQPAPASPPRRRRWRESVARAERPLLFAGLALVTAHLLDLALSGPDTSALGVALILAVALGWALAQPHVTRPTRLFLGVAVGLLAIGFGVVSHGLHVVNSGPDWRD
Ga0184617_10505022	3300018066	Groundwater Sediment	MKTITSRAARAERPLLLTGLALVTAHLLDLALSGADTSVLGVAVIVAVAAAWALAQPHVTRPTRLALGVVVGLLAVGFGVVSHGLHVVNSGLDWRDVTGIGYVVGGFLLVVAGIAAVASQRRAPWRTGLRWRSAHAVGWIAGA
Ga0190265_106555962	3300018422	Soil	MTATLDTPRSAAAPPLRRSRARLARAERPLLLAGLALVTAHLLDLAFSGPATTIPGVLAIAAVPAAWAYFQPRLKRPTRLLLGFVVGLLATGLGVVSHGLHVVNSGPDLYDVTGVAMIAGGLLLVASGAAAVAAPRQPG
Ga0190265_123927951	3300018422	Soil	MTATLTDASPLAPPRTRPTRGRRERVAGLERPFLLAGLALVALHLLDLAFSGPDTSALAVLAIVAVPGAWALAQPRVTRPTRLALGVVIGLVTFGFGVVSHGLHVVNSGPDWTDVTGVGMIAGG
Ga0190265_134204791	3300018422	Soil	MHPTPRERLAQLERPLLLAGLALITIHLLDLALSGPATSILGVAAIAGVPLAWALAAPRATRPTRVAVGVLFGLIVIGFGVVSHGLHVVNSGPDWRDLTGVGYVL
Ga0190272_101694213	3300018429	Soil	MTTTITTPRSVAAPPSGRSRARLARRERPLLLAGLALVALHLLDLALSGPDTSLLGVLGIVAVPAAWALAQPHVTRPTRLVLGVVVGLVTLGFGVVSHGLHVVNSGPAWTDVTGVGMI
Ga0190272_104297041	3300018429	Soil	MTATLAAPAAVPPLARRGGRRERIARLERPLLAGGLALVLLHLLDLAFSGPDTAILGVLAIVALPAAWLAAQPRLTRPTRLGLAVVVGLFTLGFGVVSHGLHVVNSGPDWR
Ga0190275_105411672	3300018432	Soil	MTSITLRARIARLERPLLLAGLALVTAHLLDLALSGPDTTVLGVLVILALPVGYALAQPRLTRPTRLGLGIVIGLLAVGFGVVSHGLHVVNSGPDWRDVTGVGYILGGLLLVAAGLTAT
Ga0190268_118766221	3300018466	Soil	MTATLTAPRPGTTVTARNGRLRERLAGLERPLLLAGLALVALHLLDLAFSGPDTSLPGVLAIVAIPAAWALAQPHVTRPTRLALGIVVGLLSLGFGVVSHGLHVV
Ga0190270_103540363	3300018469	Soil	MTSMTFRERIARLERPLLLAGLALVTAHLLDLALSGPDTSLPGVLVILALPVIYAWGQPRLTRPTRLGLGVAVGLLAAGFGVVSHGLHVVNSGLDWR
Ga0190270_107513071	3300018469	Soil	MTATLTDERQIARTRASGGGRERVARLERPLLLAGLALVVLHLLDLAFSGPDTSLPGVVAIVVIPAAAAAVQPRVTRPTRLVLGVVVGLLTMGFGVVS
Ga0190270_109279132	3300018469	Soil	MTTIITAPRPAAAPPSGRSRARLARRERPLLLAGLTLITLHLLDLALSGPDTSLLGVLGIVAVPAAWALAQPYVTRATRLVLGVLVGLLALGFGVVSHGLHVINSGPDWTDLTGIGMIAGGLLLIASGLTAIAAP
Ga0190270_111984331	3300018469	Soil	MTAVMTAPRVAAAAPSGRSRARLARLERPLLLAGLALVALHLLDLAISGPDTSLLGVLGIVAVPAAWALAQPHVTRPTRLVLGVVIGLLTFGFAVVSHGLHVVNSGPDWS
Ga0190270_127232731	3300018469	Soil	MTATITDARPRVSITAPSGRPRERLAALERPLLLAALALVALHLLDLAFSGPATSLVGVLAILAAPVAWALAQPHVSRPTRLVLGVVIGLVSLGFGVISHGLHVVNSGPDWTDITGMGM
Ga0190274_123386581	3300018476	Soil	MTATATTPAASPTRRGGRRRRLARWERPLLAGGLALVTLHLLDLAISGPDTAILGVLAIGAVPAAWLAAQPHLIRPTRFALGLFVGLLALGFGVVSHGLHVVNSGPDWRDLTGVGMALGGIML
Ga0193593_10654672	3300018939	Soil	MSAVAAPRPAATVPPLARRDGWRERVARRERPLLTAGLALVTLHLLDLAFSGPDTAPLGVLAIVAVPLARLAAQPHLVRPTRIVTGIAFGLLTFGFATVSH
Ga0193697_11374941	3300020005	Soil	MTATATTPAASPTRRGGRERIARLERPLLAAGLALLTLHLLDLAISGPHTAILGVLAIVAVPAAWLAAQPHMIRPTRLALGLFVGLLALGFGVVSHGLHVVNSGPDWRDVTGV
Ga0207688_102441162	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSAIHQASAPPRMRRGGGRARSGRDGRRARLARFERPLLAAGLALVAAHLLDLSVSGPATAWWGVLAILALPAAWFALQPRLIRPTRFGLALPTGLLAIGFGAVSHGLHVVNSG
Ga0207681_101536402	3300025923	Switchgrass Rhizosphere	MSATVQRSHAPPRSRRGGRLARLERPLLAGGLALVSAHLLDLAISGPATAWWGVLAILAFPAAWFALQPRLIRPTRFALGLLVGLLAIGFGVVSHGLHVVNSGPDWRDLTGVGMVFGGVLLLGSAV
Ga0207659_102981511	3300025926	Miscanthus Rhizosphere	MSATVQRSAAPPRSRRGGRLARLERPLLAGGLALVSAHLLDLAISGPATAWWGVLAILAFPAAWFALQPRLIRPTRFALGLVVGLLAIGFGVVSHGLHVVNSGPDWRDLTGVGMVFGGVLLLGSAVAALAAPAGPRG
Ga0207687_110343461	3300025927	Miscanthus Rhizosphere	MAAPATGRDAWDMPSIPSAGARPRDPRRARLARAERRLLLAGLALVTAHLLDLALSGPATSWLGVAVILALPAAWGLAQPHVTRPTRVALGVSIGAVALGFGVVSHGLHVVNSGPDWRDLTGVGYAAGGLLLIAAAVA
Ga0207706_115020672	3300025933	Corn Rhizosphere	MSAIHQASAPPRMRRGGGRARSGRDGRRARLARFERPLLAAGLALVAAHLLDLSVSGPATAWWGVLAILALPAAWFALQPRLIRPTRFGLALPTGLLAIGFGAVSHGLHVVNSGPDWRDVSGV
Ga0207686_111133342	3300025934	Miscanthus Rhizosphere	MSATVQRSHAPPRSRRGGRPARLERPLLAGGLVLVSAHLLDLAISGPATTVWGVAGIVALPALWVALQPRLLRPTRFGLALVVGLLAIGFGVVSHGLHVVNNGPD
Ga0207669_119562602	3300025937	Miscanthus Rhizosphere	MSATVQRSHAPPRSRRGGRLARLERPLLAGGLALVAIHLLDLAISGPATTVWGVAGIVALPALWVALQPRLLRPTRFGLALVVGLLAIGFGVVSHGLHVVNNGPD
Ga0207691_113813821	3300025940	Miscanthus Rhizosphere	MPLIPSSGARPRGPRRARLARAERPLLLAGLALVTAHLLDLALSGPATSWLGVAAILALPAAWALAQPHVTRPTRVALGVSIGAVALGFGVVSNGPHVVNSGPDWRDLTGVGYAAGGALL
Ga0207712_105537352	3300025961	Switchgrass Rhizosphere	MKTITSRVARAERPLLLAGLALVTVHLLDLALSGPDTSALGVAVIVAVAAAWALAQPHVTRPTRFALGVVVGLVAIGFGVVSHGLHVVNSGPDWRDVTGVGYIAGGLLLVAAGIAATATARRAPRRSGL
Ga0207683_112634532	3300026121	Miscanthus Rhizosphere	MSATHQASAPPRMRRGGGRARSGRDGRRARLARFERPLLAAGLALVAAHLLDLSVSGPATAWWGVLAILALPAAWFALQPRLIRPTRFGLALPTGLLAIGFGAVSHGLHVVNSGPDWRDVSGVGMILGGGLLVA
Ga0207698_100840281	3300026142	Corn Rhizosphere	MSATVQRSHAPPRSRRGGRLARLERPLLAGGLALVSAHLLDLAISGPATVWWGVLAILAFPAAWFALQPRLIRPTRFALGLVVGLLAVGFGVVSHGLHVVNSGPDWRDLTG
Ga0207428_107181971	3300027907	Populus Rhizosphere	VTTTAPRPVTAPPLQRRGRRRERIARLERPLLLTGLALVTLHLLDLAFSGPATTVLGVLVIVAVPAAWALAQPQMVRPTRVLLGIAVGLLSFGFALISHVLHVVNSGLDVRDLTGIGMAIGGL
Ga0247821_102474872	3300028596	Soil	MKTITSRVARAERPLLLAGLALVTVHLLDLALSGPDTSVLGVAVIVAVAAAWALAQPHVTRPTRFALGVVVGLVAIGFGVVSHGLHVVNSGPDWRDVTGVGYIAGGLLLVAAGDVA
Ga0307320_100698801	3300028771	Soil	MTPIALDPVRAEAQPAPASPPRRRRWRESVARAERPLLFAGLALVTAHLLDLALSGPDTSALGIAVILAVALGWALAQPYVTRPTRLFLGVAVGLLAIGFGVVSHGLHVVNSGPDWRDVTGVGYVVGGLLLVVAGIVAVAATRRAPRR
Ga0307320_104294961	3300028771	Soil	MTATLYDPRPTALPLTRNGGLRERLASLERPLMLAGLTLVALHLLDLAFSGPETSLPGVLAIVAFPVAWALARPHVTRPTRLVLGVVIGLVTLGFGVISHGLHVVNSGPDWTDVTGVGMIAGGILLIA
Ga0307288_100630521	3300028778	Soil	MKTITSRAARAERPLLLTGLALVTAHLLDLALSGADTSVLGVAVIVAVAAAWALAQPHVTRPTRLALGVVVGLLAVGFGVVSHGLHVVNSGLDWRDVTGIGYIVGG
Ga0307306_102011821	3300028782	Soil	MKTITSRVARPERPLLLTGLALVTAHLLDLSLSGADTSVLGVAVIVAVAAAWALAQPHVTRPTRLVLGVVVGLIAVGFGVVSHGLHVANSGLDWRDVTGIGYIVGGLLLVAAGIAAT
Ga0307290_101726212	3300028791	Soil	MKTITSRAARAERPLLLTGLALVTAHLLDLALSGADTSVLGVAVILAVAAAWALAQPHVTRPTRLALGVVVGLLAVGFGVVSHGLHVVNSGLDWRDVTGIGYIVGGLLLVAAGIAATAAPRGAPSRSGLGW
Ga0247825_101931031	3300028812	Soil	MAAPATGRDAWDMPSIPSAGARPRDPRRARLARAERPLLLAGLALVTAHLLDLALSGPATSWLGVAVILALPAAWGLAQPHVTRPTRVALGVSIGAVALGFGVVSHGLHVVNSGPDWRDLTGVGYAAGGLLLIAAAY
Ga0307302_104622621	3300028814	Soil	MTSITLDPERAEATLAPPSPPSSRRRRWRERFARAERPLLLTGLALVTAHLLDLALSGPDTSALGVAVILAVALAWALGQRYVTRPTRLALGVVVGLLAIGFGVVSHGLHVVNSGPDWRDVTGVGYILGGLLLVVAGIAAVAAQRRAPWRTGLRWRGAHAVGWI
Ga0307286_102191192	3300028876	Soil	MKTITSRAARAERPLLLAGLALVTAHLLDLALSGPDTSVLGVAVIIAVAAAWALAQPHVTRPTRLVLGVVVGLLAIGFGVVSHGLHVVNSGPDWRDVTGVGYIAGGLLLVSAGIAATAAPRRAPRRSGLGWRGAHALGW
Ga0307304_103382252	3300028885	Soil	MKSAIARAERPLLLTGLALVTAHLLDLALSGPDTSVLGVIVIVALPLAWGLAQPHVTRPTRLVLGVVIGLLAVGFGVVSHGLHAVNSGPDWRDVTGVGYVVGGLLLVAAGLAAV
Ga0299907_100383931	3300030006	Soil	MTATVTAPRPAAAPPSRRGRARLARLERPLLLAGLALVALHLLDLAFSGPDTTAAGVLAIVAVPVAWALAQPHVTRATRLLLAIPVGLVALGFGVVSHGLHVVNSGPAWTDVTGVGMIAGGLCLAASG
Ga0299914_104044291	3300031228	Soil	MTATVTAPRPAAAPPSRRGRARLARLERPLLLAGLALVALHLLDLAFSGPDTTAAGVLAIIAVPVAWALAQPHVTRATRLLLAIPVGLVALGFGVVSHGLHVVNSGPDWTDVTGVGMIAGGLCLAAS
Ga0299913_103649572	3300031229	Soil	MTSITLRARIVRLERPLLLAGLALVTAHLLDLALSGPDTSILGVLVILALPLAYALAQPRLTRPTRLGLGVVIGLLAVGFGVVSHGLHAVNSGPDWRDVTGVGYILGGLLLVAAGLSAAAAPRRAPRRP
Ga0299913_106249331	3300031229	Soil	MTATVTAPRPAAAPPSRRGRARLARLERPLLLAGLALVALHLLDLAFSGPDTTAAGVLAIVAVPVAWALAQPHVTRATRLLLAVPVGLVALGFGVVSHGLHVVNSGPDWTDVTGVGMIAGGLCLA
Ga0307405_111405921	3300031731	Rhizosphere	MSTTLQPSPALPRSRRGGRPARLERPLLAGGLALVAVHALDLAISGPDTTLVGVLGIVAVPAAWFALQPRLIRPTRFALALVVGLLALGFGVVSHGLHVINSGPDW
Ga0307413_110615991	3300031824	Rhizosphere	MTATLAEPRASTPSPPRRYRRRLARLERPLLLAGLALVTLHLLDLAFSGPDTSLVGILAIVAAAGVCALAQRHVTRPTRLIPGVVVGLLALGFGVISHGLHVVNSGPDWTDVTGVGMIAGGLFLIGGGLTAIAAPRRAPR
Ga0308176_122644371	3300031996	Soil	MKTITSRVARAERPLLLTGLALVTAHLLDLALSGADTSVLGVAVIVAVAAAWALAQPHVTRPTRLVLGVVVGLVAVGFGVVSHGLHVANSGLDWRDVTGIGYIVGGLLLVAAGIAATAAPRRAPSRTGLGW
Ga0307416_1031146812	3300032002	Rhizosphere	MTATVTAPRSAAAPPSGRSRARLARLERPLLLAGLALVALHLLDLALSGPDTSIFGVLGIVAVPATWALAQPHVTRPTRLVLGVVIGLLTFGFGVVSHGLHVVNSGPAWADVTGVGMIAGGLLLLAAGLT
Ga0326721_107994062	3300032080	Soil	MTATLIQPAAIPSPARRSRRERLARLERPLGLAGLALVALHLLDLAFSGPDTSLPAVLAIAAAPFAWALAQPRVIRPTRLVLGVVVGLLATGFGVASHGLHVVNSGPDWTDLTGVGMI
Ga0307415_1020593881	3300032126	Rhizosphere	MTATVLRPVTAAPLRRRGGRRERIARLERPLLAAGLALVAIHLLDLALAGADTTVLGVLGIVGVPVAWLVLQPRLTRPTRFALGLTVGLLAVGFGVVSHGLHVVNSGPDWTDVTGVGMIAGGLLLVASGLTAI
Ga0307415_1025724871	3300032126	Rhizosphere	MTATLTDPRAGVPPLTQHGGLRERLARLERPLLLTGLALVALHLLDLAFSGPHTSLPAVLTISAAPPAWALAQPHVTRPTRLVLGIAIGLLTFGFGVVSHGLHVANSGPDWTDVTGVGMIAG
Ga0247829_114924281	3300033550	Soil	MPLIPSSGARPRGPRRARLARAERPLLLAGLALVTAHLLDLALSGPATSWLGVAAILALPAAWALAQPHVTRPTRVALGVSIGAVALGFGVVSHGLHVVNSGPDWRDLTGVGYAAGGALLVAAA
Ga0247830_106126062	3300033551	Soil	MSATVQRSHAPPRSRRGGRLARLERPLLAGGLALVTAHLLDLAISGPATAWWGVLAILAFPAAWFALQPRLIRPTRFALGLVVGLLAIGFGVVSHGLHVVNSGPDWRDLTGVGMVFGGVLLLGSAVAALAAPAGPRRGHR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089971

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences